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2024-05-02 01:53:48

Gene list

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COG category: Transcription
Organism: Escherichia coli K12, K-12

Number of genes found: 324

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Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA b1903 orf, hypothetical proteinchromosome CDS1985468 339 + 0.474926
NA b1506 orf, hypothetical proteinchromosome CDS1588381 180 - 0.466667
NA b2450 orf, hypothetical proteinchromosome CDS2562515 840 + 0.49881
NA b2667 orf, hypothetical proteinchromosome CDS2795233 300 + 0.53
NA b2856 orf, hypothetical proteinchromosome CDS2992959 156 - 0.365385
abgR b1339 putative transcriptional regulator LYSR-typechromosome CDS1402765 909 + 0.49615
acrR b0464 acrAB operon repressorchromosome CDS484985 648 + 0.453704
adiY b4116 putative ARAC-type regulatory proteinchromosome CDS4335191 762 - 0.413386
agaR b3131 putative DEOR-type transcriptional regulator of aga operonchromosome CDS3275878 810 - 0.522222
allR b0506 repressor of allantoin and glyoxylate utilization operonschromosome CDS532235 816 + 0.525735
alpA b2624 prophage CP4-57 regulatory protein alpAchromosome CDS2756666 213 + 0.469484
alsK b4084 D-allose kinasechromosome CDS4304893 930 - 0.549462
appY b0564 regulatory protein affecting appA and other geneschromosome CDS582904 750 + 0.317333
araC b0064 transcriptional regulator for ara operonchromosome CDS70387 879 + 0.525597
arcA b4401 negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)chromosome CDS4637613 717 - 0.51046
argR b3237 repressor of arg regulon; cer-mediated site specific recombinationchromosome CDS3382725 471 + 0.4862
arsR b3501 transcriptional repressor of chromosomal ars operonchromosome CDS3646551 354 + 0.508475
ascG b2714 ascBF operon repressorchromosome CDS2836276 1014 - 0.531558
asnC b3743 regulator for asnA, asnC and gidAchromosome CDS3924568 459 - 0.494553
baeR b2079 transcriptional response regulatory protein (sensor BaeS)chromosome CDS2162300 723 + 0.540802
basR b4113 transcriptional regulatory protein, member of 2-component regulatory system,chromosome CDS4331305 669 - 0.532138
betI b0313 probably transcriptional repressor of bet geneschromosome CDS327971 588 - 0.568027
bglG b3723 positive regulation of bgl operonchromosome CDS3903754 837 - 0.428913
bglJ b4366 2-component transcriptional regulatorchromosome CDS4602183 678 + 0.452802
cadC b4133 transcriptional activator of cad operonchromosome CDS4358419 1539 - 0.419753
cbl b1987 transcriptional regulator cys regulon; accessory regulatory circuit affecting cysMchromosome CDS2057988 951 - 0.48265
cdaR b0162 regulator of D-galactarate, D-glucarate and D-glycerate metabolismchromosome CDS182445 1176 + 0.528061
celD b1735 negative transcriptional regulator of cel operonchromosome CDS1816629 843 - 0.415184
citB b0620 sequence similarity to Shigella regulatorchromosome CDS653085 681 + 0.50514
cobB b1120 putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferasechromosome CDS1178743 840 + 0.517857
cpxR b3912 transcriptional regulator in 2-component systemchromosome CDS4102995 699 - 0.513591
creB b4398 catabolic regulation response regulatorchromosome CDS4634030 690 + 0.552174
csgD b1040 putative 2-component transcriptional regulator for 2nd curli operonchromosome CDS1101769 651 - 0.417819
csiE b2535 stationary phase inducible proteinchromosome CDS2663436 1302 + 0.513825
cspA b3556 cold shock protein 7.4, transcriptional activator of hnschromosome CDS3718072 213 + 0.483568
cspB b1557 cold shock-like proteinchromosome CDS1639363 216 - 0.351852
cspC b1823 cold shock proteinchromosome CDS1905250 210 - 0.466667
cspD b0880 stress induced DNA replication inhibitor.chromosome CDS921589 225 - 0.484444
cspE b0623 cold shock proteinchromosome CDS656515 210 + 0.438095
cspF b1558 cold shock-like proteinchromosome CDS1639879 213 + 0.483568
cspG b0990 homolog of Salmonella cold shock proteinchromosome CDS1050684 213 + 0.441315
cspH b0989 cold shock-like proteinchromosome CDS1050186 213 - 0.469484
cspI b1552 cold shock-like proteinchromosome CDS1636479 213 - 0.403756
cueR b0487 copper responsive transcription regulatorchromosome CDS513217 408 + 0.585784
cusR b0571 response regulator of copper sensing systemchromosome CDS593983 684 - 0.538012
cynR b0338 cyn operon positive regulatorchromosome CDS357015 900 - 0.55
cysB b1275 positive transcriptional regulator for cysteine regulonchromosome CDS1331879 975 + 0.483077
cytR b3934 regulator for deo operon, udp, cdd, tsx, nupC, and nupGchromosome CDS4121454 1026 - 0.520468
dbpA b1343 ATP-dependent RNA helicasechromosome CDS1407535 1374 + 0.519651
dcuR b4124 response regulator of fumarate two-component regulatory systemchromosome CDS4347338 720 - 0.493056
deaD b3162 inducible ATP-independent RNA helicasechromosome CDS3303993 1941 - 0.552293
deoR b0840 transcriptional repressor for deo operon, tsx, nupGchromosome CDS881199 759 - 0.507246
dgoR b4479 transcriptional repressor for galactonate utilization (GntR family)chromosome CDS3872494 690 - 0.553623
dicA b1570 regulator of dicBchromosome CDS1645958 408 + 0.436274
dinG b0799 probably ATP-dependent helicasechromosome CDS832293 2151 + 0.540679
dsdC b2364 D-serine dehydratase (deaminase) transcriptional activatorchromosome CDS2474716 936 - 0.480769
ebgR b3075 regulator of ebg operonchromosome CDS3219488 984 + 0.517276
emrR b2684 regulator of plasmid mcrB operon (microcin B17 synthesis)chromosome CDS2808792 531 + 0.491525
envR b3264 putative transcriptional regulatorchromosome CDS3410825 663 - 0.441931
envY b0566 envelope protein; thermoregulation of porin biosynthesischromosome CDS585370 762 - 0.463255
evgA b2369 putative positive transcription regulator (sensor EvgS)chromosome CDS2481777 615 + 0.4
exuR b3094 negative regulator of exu regulon, exuT, uxaAC, and uxuBchromosome CDS3244659 792 + 0.507576
fadR b1187 negative regulator for fad regulon, and positive activator of fabAchromosome CDS1234161 720 + 0.5125
farR b0730 transcriptional regulator of succinylCoA synthetase operonchromosome CDS764376 723 - 0.481328
feaR b1384 regulatory protein for 2-phenylethylamine catabolismchromosome CDS1444402 906 - 0.485651
fecI b4293 probable RNA polymerase sigma factorchromosome CDS4515737 522 - 0.545977
fhlA b2731 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operonschromosome CDS2852360 2079 + 0.525734
fimZ b0535 fimbrial Z protein; probable signal transducerchromosome CDS563071 633 - 0.366509
fis b3261 site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcriptionchromosome CDS3409293 297 + 0.47138
flgM b1071 anti-FliA (anti-sigma) factor; also known as RflB proteinchromosome CDS1129058 294 - 0.527211
fliA b1922 flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operonschromosome CDS1999094 720 - 0.541667
fruR b0080 transcriptional repressor of fru operon and otherschromosome CDS88028 1005 + 0.549254
fucR b2805 positive regulator of the fuc operonchromosome CDS2937390 732 + 0.48224
gadX b3516 putative ARAC-type regulatory proteinchromosome CDS3663009 825 - 0.409697
galR b2837 repressor of galETK operonchromosome CDS2974621 1032 + 0.527132
galS b2151 mgl repressor, galactose operon inducerchromosome CDS2238650 1041 - 0.524496
gcvA b2808 positive regulator of gcv operonchromosome CDS2939672 918 - 0.491285
glcC b2980 transcriptional activator for glc operonchromosome CDS3126294 765 + 0.550327
glpR b3423 repressor of the glp operonchromosome CDS3557870 759 - 0.546772
gntR b3438 regulator of gluconate (gnt) operonchromosome CDS3575754 996 - 0.544177
greA b3181 transcription elongation factor: cleaves 3' nucleotide of paused mRNAchromosome CDS3326261 462 - 0.484848
greB b3406 transcription elongation factor and transcript cleavagechromosome CDS3534798 513 + 0.495127
gutM b2706 glucitol operon activatorchromosome CDS2826643 360 + 0.55
hcaR b2537 transcriptional activator of hca clusterchromosome CDS2666028 891 - 0.498316
hdfR b4480 transcriptional regulator of the flhDC operonchromosome CDS3945151 840 - 0.484524
hepA b0059 probable ATP-dependent RNA helicasechromosome CDS60358 2907 - 0.54902
hipB b1508 persistence to inhibition of murein or DNA biosynthesis; regulatory proteinchromosome CDS1590200 267 - 0.445693
hyfR b2491 putative 2-component regulator, interaction with sigma 54chromosome CDS2609943 1992 + 0.525602
hypB b2727 guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3chromosome CDS2849023 873 + 0.552119
iciA b2916 replication initiation inhibitor, binds to 13-mers at oriCchromosome CDS3057775 894 + 0.543624
iclR b4018 repressor of aceBA operonchromosome CDS4220827 864 - 0.532407
idnR b4264 L-idonate transcriptional regulatorchromosome CDS4488164 999 - 0.47047
ilvY b3773 positive regulator for ilvCchromosome CDS3954950 894 - 0.576063
iscR b2531 Fe-S cluster-containing transcription factorchromosome CDS2659665 489 - 0.535787
kdgR b1827 regulator of kdgK, kdgT, and edachromosome CDS1907332 792 - 0.497475
kdpE b0694 regulator of kdp operon (transcriptional effector)chromosome CDS720279 678 - 0.566372
lacI b0345 transcriptional repressor of the lac operonchromosome CDS365652 1083 - 0.56325
leuO b0076 probable transcriptional activator for leuABCD operonchromosome CDS84191 1122 + 0.437611
lexA b4043 regulator for SOS(lexA) regulonchromosome CDS4255138 609 + 0.518883
lldR b3604 transcriptional regulatorchromosome CDS3777077 777 + 0.540541
lrhA b2289 NADH dehydrogenase transcriptional regulator, LysR family; modulates SprE(RssB) activitychromosome CDS2403725 939 - 0.497338
lrp b0889 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport systemchromosome CDS931818 495 + 0.478788
lysR b2839 positive regulator for lyschromosome CDS2977043 936 + 0.534188
malI b1620 maltose regulon regulatory proteinchromosome CDS1696176 1029 - 0.539359
malT b3418 positive regulator of mal regulonchromosome CDS3551107 2706 + 0.54102
marA b1531 multiple antibiotic resistance; transcriptional activator of defense systemschromosome CDS1617592 390 + 0.458974
marR b1530 multiple antibiotic resistance protein; repressor of mar operonchromosome CDS1617201 378 + 0.510582
melR b4118 regulator of melibiose operonchromosome CDS4338743 909 - 0.50275
metJ b3938 repressor of all met genes but metFchromosome CDS4126101 318 - 0.518868
metR b3828 regulator for metE and metHchromosome CDS4009886 954 - 0.562893
mfd b1114 transcription-repair coupling factor; mutation frequency declinechromosome CDS1169741 3447 - 0.547723
mhpR b0346 transcriptional regulator for mhp operonchromosome CDS366811 948 - 0.53692
mlc b1594 putative NAGC-like transcriptional regulatorchromosome CDS1665368 1221 - 0.522523
mntR b0817 transcriptional regulator MntRchromosome CDS852406 468 + 0.540598
mtlR b3601 repressor for mtlchromosome CDS3773595 588 + 0.510204
nac b1988 nitrogen assimilation control proteinchromosome CDS2059040 918 - 0.481481
nagC b0676 transcriptional repressor of nag (N-acetylglucosamine) operonchromosome CDS699597 1221 - 0.529894
nanK b3222 ManNAc kinasechromosome CDS3367497 909 - 0.581958
nanR b3226 Nan regulatorchromosome CDS3371720 792 - 0.522727
narL b1221 pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor geneschromosome CDS1274402 651 - 0.517665
narP b2193 nitrate/nitrite response regulator (sensor NarQ)chromosome CDS2288522 648 + 0.524691
nhaR b0020 transcriptional activator of nhaAchromosome CDS18715 906 + 0.474614
nikR b3481 nickel-responsive transcriptional regulatorchromosome CDS3616611 402 + 0.572139
nlp b3188 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Muchromosome CDS3332931 279 + 0.501792
nrfB b4071 formate-dependent nitrite reductase; a penta-haeme cytochrome cchromosome CDS4287262 573 + 0.537522
nusA b3169 transcription pausing; L factorchromosome CDS3314061 1488 - 0.527554
nusB b0416 transcription termination; L factorchromosome CDS434361 420 + 0.538095
nusG b3982 component in transcription antiterminationchromosome CDS4175766 546 + 0.516484
ompR b3405 response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesischromosome CDS3533887 720 - 0.551389
oxyR b3961 activator, hydrogen peroxide-inducible geneschromosome CDS4156513 918 + 0.554466
paaX b1399 transcriptional repressor for phenylacetic acid degradationchromosome CDS1461563 951 + 0.50368
pdhR b0113 transcriptional regulator for pyruvate dehydrogenase complexchromosome CDS122092 765 + 0.55817
perR b0254 peroxide resistance proteinchromosome CDS268513 894 - 0.479866
phnF b4102 putative transcriptional regulatorchromosome CDS4319720 726 - 0.618457
phnO b4093 putative regulator, phn operonchromosome CDS4313127 435 - 0.57931
phoB b0399 positive response regulator for pho regulon, sensor is PhoR (or CreC)chromosome CDS416366 690 + 0.544928
phoP b1130 transcriptional regulatory proteinchromosome CDS1188999 672 - 0.477679
prpR b0330 regulator for prp operonchromosome CDS346081 1587 - 0.551985
pspA b1304 phage shock protein, inner membrane proteinchromosome CDS1366103 669 + 0.493274
pspC b1306 phage shock protein: activates phage shock-protein expressionchromosome CDS1367049 360 + 0.502778
pspF b1303 psp operon transcriptional activatorchromosome CDS1364959 993 - 0.516616
purR b1658 transcriptional repressor for pur regulon, glyA, glnB, prsA, speAchromosome CDS1735868 1026 + 0.538012
rbsR b3753 regulator for rbs operonchromosome CDS3936250 993 + 0.506546
rcsA b1951 positive regulator for ctr capsule biosynthesis, positive transcription factorchromosome CDS2021992 624 + 0.38141
rcsB b2217 positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)chromosome CDS2314199 651 + 0.477727
recG b3652 DNA helicase, resolution of Holliday junctions, branch migrationchromosome CDS3823233 2082 + 0.572046
relA b2784 (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factorchromosome CDS2909439 2235 - 0.537808
rfaH b3842 transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysinchromosome CDS4022356 489 - 0.496933
rfaP b3630 lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS cochromosome CDS3803176 798 - 0.433584
rfaZ b3624 lipopolysaccharide core biosynthesischromosome CDS3797368 852 - 0.325117
rhaR b3906 positive regulator for rhaRS operonchromosome CDS4096579 939 + 0.497338
rhaS b3905 positive regulator for rhaBAD operonchromosome CDS4095759 837 + 0.518519
rhlB b3780 putative ATP-dependent RNA helicasechromosome CDS3962388 1266 - 0.525276
rhlE b0797 putative ATP-dependent RNA helicasechromosome CDS830095 1365 + 0.567033
rho b3783 transcription termination factor Rho; polarity suppressorchromosome CDS3964440 1260 + 0.503175
rnb b1286 RNase II, mRNA degradationchromosome CDS1345002 1935 - 0.5323
rnc b2567 RNase III, ds RNAchromosome CDS2701405 681 - 0.506608
rnk b0610 regulator of nucleoside diphosphate kinasechromosome CDS642780 411 - 0.547445
rnr b4179 ribonuclease Rchromosome CDS4404635 2484 + 0.55153
rob b4396 right origin-binding proteinchromosome CDS4632464 870 - 0.532184
rof b0189 modulator of Rho-dependent transcription termination.chromosome CDS213678 261 - 0.475096
rpiR b4089 transcriptional repressor of rpiB expressionchromosome CDS4310124 924 - 0.475108
rpoA b3295 RNA polymerase, alpha subunitchromosome CDS3438062 990 - 0.522222
rpoB b3987 RNA polymerase, beta subunitchromosome CDS4179268 4029 + 0.526185
rpoC b3988 RNA polymerase, beta prime subunitchromosome CDS4183373 4224 + 0.538352
rpoD b3067 RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatureschromosome CDS3211069 1842 + 0.529859
rpoE b2573 RNA polymerase, sigma-E factor; heat shock and oxidative stresschromosome CDS2707459 576 - 0.487847
rpoH b3461 RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatureschromosome CDS3597952 855 - 0.54152
rpoN b3202 RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulationchromosome CDS3342739 1434 + 0.528591
rpoS b2741 RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteinschromosome CDS2864581 993 - 0.520644
rpoZ b3649 RNA polymerase, omega subunitchromosome CDS3820129 276 + 0.532609
rsd b3995 regulator of sigma Dchromosome CDS4194355 477 - 0.490566
rstA b1608 response transcriptional regulatory protein (RstB sensor)chromosome CDS1680174 729 + 0.491084
rtcR b3422 sigma54-dependent regulator of rtcBA expressionchromosome CDS3556290 1599 + 0.557849
sdiA b1916 transcriptional regulator of ftsQAZ gene clusterchromosome CDS1994134 723 - 0.467497
sgcR b4300 putative DEOR-type transcriptional regulatorchromosome CDS4524129 783 - 0.496807
slyA b1642 transcriptional regulator for cryptic hemolysinchromosome CDS1718414 441 - 0.478458
sohA b3129 putative protease; htrA suppressor proteinchromosome CDS3275024 336 + 0.47619
soxR b4063 redox-sensing activator of soxSchromosome CDS4275492 465 + 0.52043
soxS b4062 regulation of superoxide response regulonchromosome CDS4275083 324 - 0.509259
spoT b3650 (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolasechromosome CDS3820423 2109 + 0.537221
srlR b2707 regulator for gut (srl), glucitol operonchromosome CDS2827069 774 + 0.488372
srmB b2576 ATP-dependent RNA helicasechromosome CDS2710918 1335 + 0.547566
tdcA b3118 transcriptional activator of tdc operonchromosome CDS3264149 939 - 0.421725
torR b0995 response transcriptional regulator for torA (sensor TorS)chromosome CDS1056485 693 - 0.52381
treR b4241 repressor of treA,B,Cchromosome CDS4464322 948 - 0.537975
trpR b4393 regulator for trp operon and aroH; trp aporepressorchromosome CDS4630783 327 + 0.541284
ttk b3641 putative transcriptional regulatorchromosome CDS3812475 639 + 0.527387
tyrR b1323 transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transportchromosome CDS1384744 1542 + 0.521401
uhpA b3669 response regulator, positive activator of uhpT transcription (sensor, uhpB)chromosome CDS3848159 591 - 0.588832
uidR b1618 repressor for uid operonchromosome CDS1694486 591 - 0.509306
umuD b1183 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuCchromosome CDS1229990 420 + 0.480952
uvrY b1914 putative 2-component transcriptional regulatorchromosome CDS1992727 657 - 0.497717
uxuR b4324 regulator for uxu operonchromosome CDS4552599 774 + 0.536176
xapR b2405 regulator for xapAchromosome CDS2519615 885 - 0.505085
xylR b3569 putative regulator of xyl operonchromosome CDS3733002 1179 + 0.487701
yafC b0208 putative transcriptional regulator LYSR-typechromosome CDS229967 915 - 0.496175
yafP b0234 orf, hypothetical proteinchromosome CDS252709 453 + 0.432671
yafY b0251 hypothetical transcriptional regulatorchromosome CDS265334 858 - 0.536131
yagI b0272 putative regulatorchromosome CDS287628 759 - 0.632411
yagP b0282 putative transcriptional regulator LYSR-typechromosome CDS296605 411 - 0.525547
yahA b0315 orf, hypothetical proteinchromosome CDS331595 1089 + 0.459137
yahB b0316 putative transcriptional regulator LYSR-typechromosome CDS332725 933 - 0.493033
yaiV b0375 orf, hypothetical proteinchromosome CDS393685 669 + 0.403587
yajF b0394 possible NAGC-like transcriptional regulatorchromosome CDS409230 1047 + 0.541547
ybaD b0413 orf, hypothetical proteinchromosome CDS432226 450 + 0.513333
ybaO b0447 putative LRP-like transcriptional regulatorchromosome CDS467520 546 + 0.487179
ybbS b0504 putative transcriptional regulator LYSR-typechromosome CDS530519 927 - 0.524272
ybcM b0546 putative ARAC-type regulatory proteinchromosome CDS570677 798 + 0.362155
ybdM b0601 orf, hypothetical proteinchromosome CDS633970 630 - 0.468254
ybdO b0603 putative transcriptional regulator LYSR-typechromosome CDS635939 903 - 0.386489
ybeF b0629 putative transcriptional regulator LYSR-typechromosome CDS659648 801 - 0.470662
ybhD b0768 putative transcriptional regulator LYSR-typechromosome CDS798845 1017 - 0.445428
ybiH b0796 putative transcriptional regulatorchromosome CDS829195 684 - 0.542398
ycaN b0900 putative transcriptional regulator LYSR-typechromosome CDS947883 909 - 0.466447
yccR b0959 orf, hypothetical proteinchromosome CDS1020361 630 + 0.480952
ycdC b1013 hypothetical transcriptional regulatorchromosome CDS1073465 639 + 0.513302
ycfQ b1111 orf, hypothetical proteinchromosome CDS1167423 711 - 0.50211
ycfX b1119 putative NAGC-like transcriptional regulatorchromosome CDS1177816 912 + 0.527412
ycgE b1162 putative transcriptional regulatorchromosome CDS1212551 732 - 0.487705
yciT b1284 putative DEOR-type transcriptional regulatorchromosome CDS1341621 750 - 0.488
ycjC b1299 orf, hypothetical proteinchromosome CDS1359935 558 + 0.508961
ycjW b1320 putative LACI-type transcriptional regulatorchromosome CDS1380987 999 - 0.454454
ycjZ b1328 putative transcriptional regulator LYSR-typechromosome CDS1390015 900 + 0.465556
ydcI b1422 putative transcriptional regulator LYSR-typechromosome CDS1492172 1065 - 0.482629
ydcN b1434 orf, hypothetical proteinchromosome CDS1504196 537 + 0.493482
ydcR b1439 multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport systemchromosome CDS1508027 1407 + 0.513859
ydeO b1499 putative ARAC-type regulatory proteinchromosome CDS1580950 762 - 0.395013
ydeW b1512 putative transcriptional regulator, sorC familychromosome CDS1598312 954 - 0.507338
ydfH b1540 orf, hypothetical proteinchromosome CDS1626376 687 + 0.500728
ydhB b1659 putative transcriptional regulator LYSR-typechromosome CDS1736890 933 - 0.536977
ydhM b1649 hypothetical transcriptional regulatorchromosome CDS1724047 600 + 0.523333
ydiP b1696 putative ARAC-type regulatory proteinchromosome CDS1776414 912 - 0.419956
ydiZ b1724 orf, hypothetical proteinchromosome CDS1805424 291 + 0.43299
ydjF b1770 putative DEOR-type transcriptional regulatorchromosome CDS1852120 759 - 0.422925
yeaM b1790 putative ARAC-type regulatory proteinchromosome CDS1872779 822 - 0.498783
yeaT b1799 putative transcriptional regulator LYSR-typechromosome CDS1878910 945 - 0.519577
yebK b1853 orf, hypothetical proteinchromosome CDS1934676 870 + 0.489655
yedL b1932 orf, hypothetical proteinchromosome CDS2008624 480 + 0.470833
yedW b1969 putative 2-component transcriptional regulatorchromosome CDS2036176 720 - 0.4375
yeeY b2015 putative transcriptional regulator LYSR-typechromosome CDS2085353 951 - 0.506835
yegW b2101 putative transcriptional regulatorchromosome CDS2180057 747 - 0.514056
yehT b2125 orf, hypothetical proteinchromosome CDS2210265 735 - 0.496599
yehV b2127 putative transcriptional regulatorchromosome CDS2212888 732 + 0.528689
yeiE b2157 putative transcriptional regulator LYSR-typechromosome CDS2246759 882 - 0.537415
yejH b2184 putative ATP-dependent helicasechromosome CDS2278654 1761 + 0.531516
yfaH b2238 orf, hypothetical proteinchromosome CDS2347709 207 + 0.415459
yfaX b2248 putative regulatorchromosome CDS2359451 783 - 0.509579
yfeD b2399 orf, hypothetical proteinchromosome CDS2516835 393 + 0.46056
yfeG b2437 putative ARAC-type regulatory proteinchromosome CDS2552152 1053 - 0.533713
yfeR b2409 putative transcriptional regulator LYSR-typechromosome CDS2523952 927 - 0.539374
yfeT b2427 orf, hypothetical proteinchromosome CDS2542774 858 - 0.516317
yfhH b2561 orf, hypothetical proteinchromosome CDS2696709 921 + 0.509229
yfiE b2577 putative transcriptional regulator LYSR-typechromosome CDS2712461 927 - 0.486516
yfjR b2634 orf, hypothetical proteinchromosome CDS2767725 702 + 0.57265
ygaA b2709 putative 2-component transcriptional regulatorchromosome CDS2828797 1590 - 0.557233
ygaE b2664 putative transcriptional regulatorchromosome CDS2793678 681 + 0.534508
ygbI b2735 putative DEOR-type transcriptional regulatorchromosome CDS2858489 798 - 0.513784
ygcP b2768 putative anti-terminator regulatory proteinchromosome CDS2892218 576 + 0.465278
ygeH b2852 putative invasion proteinchromosome CDS2990116 1377 + 0.347131
ygeK b2855 putative 2-component transcriptional regulatorchromosome CDS2992482 447 - 0.355705
ygeV b2869 putative transcriptional regulatorchromosome CDS3002030 1779 - 0.45756
ygfI b2921 putative transcriptional regulator LYSR-typechromosome CDS3064299 912 - 0.451754
yggD b2929 putative transcriptional regulatorchromosome CDS3072708 510 - 0.480392
ygiP b3060 putative transcriptional regulator LYSR-typechromosome CDS3203346 933 - 0.496249
ygiT b3021 orf, hypothetical proteinchromosome CDS3165873 396 - 0.421717
ygiX b3025 putative 2-component transcriptional regulatorchromosome CDS3167850 660 + 0.516667
ygjM b3082 orf, hypothetical proteinchromosome CDS3231750 417 - 0.484412
yhaJ b3105 putative transcriptional regulator LYSR-typechromosome CDS3251340 897 - 0.552954
yhcO b3239 orf, hypothetical proteinchromosome CDS3383879 273 - 0.428571
yhcS b3243 putative transcriptional regulator LYSR-typechromosome CDS3387542 930 + 0.529032
yhfR b3375 putative transcriptional regulatorchromosome CDS3502008 798 + 0.501253
yhhY b3441 orf, hypothetical proteinchromosome CDS3579161 489 + 0.517382
yhiE b3512 orf, hypothetical proteinchromosome CDS3656389 528 + 0.329545
yhiW b3515 putative ARAC-type regulatory proteinchromosome CDS3661913 729 - 0.418381
yhjB b3520 putative regulatorchromosome CDS3669315 603 - 0.477612
yhjC b3521 putative transcriptional regulator LYSR-typechromosome CDS3670365 972 + 0.520576
yiaC b3550 orf, hypothetical proteinchromosome CDS3711675 441 + 0.521542
yiaG b3555 orf, hypothetical proteinchromosome CDS3717501 291 + 0.439863
yiaJ b3574 transcriptional repressor of the yiaK-S operon.chromosome CDS3739707 849 - 0.52179
yiaU b3585 putative transcriptional regulator LYSR-typechromosome CDS3750015 975 + 0.476923
yidL b3680 putative ARAC-type regulatory proteinchromosome CDS3858276 924 + 0.435065
yidP b3684 putative transcriptional regulatorchromosome CDS3861922 717 + 0.51325
yidZ b3711 putative transcriptional regulator LYSR-typechromosome CDS3890788 960 + 0.521875
yieP b3755 orf, hypothetical proteinchromosome CDS3938658 693 - 0.493506
yihL b3872 putative transcriptional regulatorchromosome CDS4058470 711 + 0.490858
yihW b3884 putative DEOR-type transcriptional regulatorchromosome CDS4072668 810 + 0.519753
yiiD b3888 putative acetyltransferase (EC 2.3.1.18)chromosome CDS4075472 990 + 0.550505
yijC b3963 orf, hypothetical proteinchromosome CDS4159090 705 + 0.526241
yijO b3954 putative ARAC-type regulatory proteinchromosome CDS4145489 852 - 0.530516
yjaB b4012 orf, hypothetical proteinchromosome CDS4211703 444 - 0.545045
yjdC b4135 orf, hypothetical proteinchromosome CDS4360756 600 - 0.53
yjeB b4178 orf, hypothetical proteinchromosome CDS4404213 426 + 0.483568
yjfJ b4182 putative alpha helical proteinchromosome CDS4408576 699 + 0.513591
yjfQ b4191 putative DEOR-type transcriptional regulatorchromosome CDS4415721 756 - 0.506614
yjgM b4256 orf, hypothetical proteinchromosome CDS4477057 504 - 0.519841
yjhI b4299 putative regulatorchromosome CDS4523038 789 - 0.408112
yjhU b4295 orf, hypothetical proteinchromosome CDS4517361 801 - 0.508115
yjiE b4327 putative transcriptional regulator LYSR-typechromosome CDS4555401 912 - 0.513158
yjiR b4340 putative regulatorchromosome CDS4568185 1413 - 0.550602
yjjM b4357 orf, hypothetical proteinchromosome CDS4592960 915 - 0.474317
yjjQ b4365 putative regulatorchromosome CDS4601500 726 + 0.450413
ykgA b0300 putative ARAC-type regulatory proteinchromosome CDS315674 720 - 0.429167
ykgD b0305 putative ARAC-type regulatory proteinchromosome CDS319451 855 + 0.512281
ykgK b0294 putative regulatorchromosome CDS309970 591 - 0.390863
ymfK b1145 putative lambdoid prophage e14 repressor proteinchromosome CDS1201482 675 - 0.444444
ynaK b1365 orf, hypothetical proteinchromosome CDS1423401 264 + 0.481061
yncC b1450 hypothetical transcriptional regulatorchromosome CDS1518229 723 + 0.439834
yneJ b1526 putative transcriptional regulator LYSR-typechromosome CDS1612828 882 + 0.535147
ynfL b1595 putative transcriptional regulator LYSR-typechromosome CDS1666723 894 - 0.526846
yoaA b1808 putative enzymechromosome CDS1889349 1911 - 0.552067
ypdB b2381 putative 2-component transcriptional regulatorchromosome CDS2498405 735 + 0.47483
ypdC b2382 putative ARAC-type regulatory proteinchromosome CDS2499152 858 + 0.536131
yphH b2550 putative NAGC-like transcriptional regulatorchromosome CDS2680879 1200 + 0.505833
yqeH b2846 orf, hypothetical proteinchromosome CDS2985498 693 + 0.369408
yqeI b2847 putative sensory transducerchromosome CDS2986524 810 + 0.396296
yqfE b2915 orf, hypothetical proteinchromosome CDS3057403 231 - 0.549784
yqgE b2948 orf, hypothetical proteinchromosome CDS3090887 636 + 0.511006
yqhC b3010 putative ARAC-type regulatory proteinchromosome CDS3152284 1128 - 0.50266
yqjI b3071 orf, hypothetical proteinchromosome CDS3214801 624 + 0.536859
yrbA b3190 orf, hypothetical proteinchromosome CDS3334571 270 - 0.5
ytfA b4205 orf, hypothetical proteinchromosome CDS4425792 327 + 0.422018
ytfH b4212 orf, hypothetical proteinchromosome CDS4432046 471 + 0.518047
zntR b3292 Zn(II)-responsive transcriptional regulatorchromosome CDS3436727 426 - 0.488263