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# Haemophilus influenzae Rd KW20

>gid:851571  HI0014  ribonuclease III (rnc)
MNHLDRLERKIGYRFNDIALLKQALTHRSAATQHNERLEFLGDSILNFTI
AEALYHQFPRCNEGELSRMRATLVREPTLAILARQFELGDYMSLGSGELK
NGGFRRESILADCVEAIIGAMSLDQGLAVTTQVIRNWYQQLLAEIKPGDN
QKDAKTRLQEYLQGKHLPLPTYEVVNIQGEAHCQIFTVKCKVKSAEKIDR
TFVAKGSSRRKAEQAAAEQILKELDIK
>gid:851611  HI0054  uxu operon regulator (uxuR)
MSHITKIKNWNTNLRKNMENIVNRTYTRIGQLLKQDISQGIYSIGDKLPT
EREISEKFGVSRTIVREAMVMLEVEKLVEVKKGSGVYVVRTPESIHMEHS
DLPDVGPFELLQARQLLESSIAEFAALQATKKDILNLKQILNREKELLTQ
NQDDYSADKDFHLALAEITQNDVLVKLQEQLWQYRFNSAMWAQLHSRILQ
NDYHHLWIEDHQTILSAIQKKNANEARKAMWQHLENVKVKLFELSDVEDP
HFDGYLFNTNPVVVGI
>gid:851651  HI0093  conserved hypothetical protein
MQLDKYTAKKIVKRAMKIIHHSVNVMDHDGVIIASGNSTRLNQRHTGAVL
ALRENRVVEIDQALAQKWNFEAQPGINLPIHYLGKNIGVVGISGEPTQVK
QYAELVKMTAELIVEQQALLEQESWHRRYKEEFILQLLHCNLNWKEMEQQ
AKFFSFDLNKSRVVVLIKLLNPALDNLQNLINYLEQSEFAQDVAILSLDQ
VVVLKTWQNSTVLSAQMKTLLPADYSKQDYKIAVGACLNLPLFEQLPLSF
QSAQSTLSYGLKHHPRKGIYVFDEHRLPVLLAGLSHSWQGNELIKPLSPL
FSEENAILYKTLQQYFLSNCDLYLTAEKLFVHPNTLRYRLNKIEQITGLF
FNKIDDKLTLYLGTLLEH
>gid:851706  HI0143  conserved hypothetical protein
MAKSGNVLNKIGSLYQSLTKSEKKIADTILRSPDLVSQCSLSEIAKHLQV
GEATLVRFCRTIGFKGFSEFKLELSIELATKDNQDESILETEIMPSDDSL
TIAQKLQTAVANVMEETINLLDLKQLEEVVKVLKKARRIFLFGVGSSGVT
AEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETA
HTIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSIGTKI
AQLFVLDLIYALLVQGEEDIAAQTKQKTLNVILEQRIK
>gid:851707  HI0144  glucose kinase, putative
MRCLALDIGGTKIAAAIVKNGEIEQRQQIHTPRENVVEGMHQALGKLLAD
YEGQFDYVAVASTGIINNGILSALNPKNLGGLAEFPLKASIAKHTDKPIG
LLNDAQAATYAEYQLQNSEQVSNFVFITVSTGVGGGIVLNQILQTGSRGI
AGHIGHTLADPNGAICGCGRRGCVEAIASGRAIEAVSSQWEEPCDPKEVF
ERFRKNDEKATALVERSAKAIANLIADLVISLDIQKIAIGGSVGLAEGYL
SLVEKYLQDFPSIYCCEIETAKFGQDAGLIGAAYWVKDVLLDKPEGTIYG
>gid:851744  HI0182  sugar kinase, putative
MHFFIQEQIMYYGLDIGGTKIELAVFNEKLEKLYSERVPTPKTDYEEWLN
TIVDLVNRADEKFGEVGTVGLGVPGFVNQQTGLAEIANIRVADNKPILCD
LSTRLGREVRAENDANCFALSEAWDTENQQYSTVLGLILGTGFGGGFVLN
GKVHSGQVGMAGELGHLQLNYHALKLLGWDNAPIYQCGCGNKACLDNYLS
GRGFEMLYQDLKGETLSARKIINLFYQSNESAVDFVNLFVELAAISIGNI
ITAFDPHMIVLGGGLSNFDYLYEALPKALPPHLMRKAKVPPIKKAKHGDS
GGVRGAAALFLTK
>gid:851748  HI0186  transcriptional regulator, putative
MTYTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLS
LLQCLKNTGMSLKDIKRFAECTIIGDDTIEERLSLFENQTKNVKCQIAEL
KRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETS
>gid:851793  HI0224  transcriptional regulator, putative
MIIFFSIVTFLRNYLMQTLDKLDRHILNVLQQDAMIPLKELSEKVNSSVA
TCQRRVQSLTDSGIITKRVAVVSPKAVGRTISVFVMVEMDNQHSYYQEQF
ERKMRQEDEVVSCYEISGDYDFMLLLHAKDMESYHAFTRRVLTGEFHVRT
YKSLFVMNFTKADSGIIL
>gid:851800  HI0231  ATP-dependent RNA helicase (deaD)
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQ
TGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYA
QGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELR
FIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRF
MNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLEVEDFDAAIIF
ARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEP
RERRLLRNIEHLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLE
QYRSLLEDLFTADQDQENIAAAMLMLLQGKQKLILPPDPPMEKRRRERND
RGDRRENPRSAERRGERKGYGNPQPMDLYRIEVGRADGVEVRHIVGAIAN
EGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFAKTRVLNKQMQMSFL
GAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRT
FSDKPRRDRRSSF
>gid:851828  HI0260.1  H. influenzae predicted coding region HI0260.1
MHQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGITYFL
QTEDWFGVNCALRHYYRGGLWGKLNKDRYRFSALETTRSFAEFHLLQRLY
EAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKE
TWMQIGRLIRKLHDLQICHTDLNAHNILLQQTEQGQKCWLLDFDKCGEKS
ADFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLTSAYHQ
>gid:851837  HI0269  RNA polymerase sigma-32 factor (rpoH)
MDKETQMMLVPQGSIEGYIRAANEYPMLTAEEEKELAERLYYHEDLDAAK
KLILSHLRFVIHVARGYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRL
VSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNE
NEVDMVANELGVSKEDVIEMESRMSGADVGFDLPTDDAETETYSPALYLE
DKSSNFAAELENENFESQATEQLGAALQSLDARSQDIIKARWLDDNKATL
HDLAAKYNVSAERIRQLETNALKKLKSAVNF
>gid:851862  HI0293  transcriptional regulator, merR family, putative
MNISEAAKLVGLSTKQIRDYEKMGLIKPAVRSLSGYRNYGESDLERLHFI
RHSRNVGFSLHQIAQLLALQDNPKRSCREVKVLTAQHIATLNQQIEQLQK
MVQKLQHWHDSCQGNDNPECLILNGLNG
>gid:851863  HI0294  met repressor (metJ)
MANWDGKYISPYAEHGKKSEQVKKITVSIPIKVLEILTNERTRRQLKSLR
HATNSELLCEAFLHAFTGQPLPTDADLMKERNDEIPEDAKVLMRELGVDP
ESWEY
>gid:851864  HI0295  transcription termination factor (rho)
MHLTELKNTPVSDLVKLGEEQMGLENLARLRKQDIVFAILKQHAKSGEDI
FGGGVLEILPDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEG
KIRPPKEGERYFALLKVDQVNDDKPEVSRSKILFENLTPLHANSRLRMER
GNGSTEDLTARILDLASPIGKGQRGLIVAPPKAGKTMLLQNIAQSITHNY
PDVELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRHVQVAEMVIEK
AKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKI
AERRVFPAIDFKRSGTRKEDLLTTADELQKMWILRKILNPMDEVDAMEFL
IDKLMMAKTNEEFFEVMKRS
>gid:851873  HI0304  conserved hypothetical protein
MMELQGKFLIAMPHLDDYFNRTVVFMCEHNEQGSMGLVINQPTDLSIAEL
YSKLNFMMKNDRTFGNEMVVAGGPMHTERGFILHKNTLNAFQHTYKVTKE
LSMTTSADVVETLGSTFAPEKYLVALGCSSWGAGQLEKEIRDNAWLVVSS
NDQILFDMPYEDRYAAANQLLGIHPYNFALAQVGHS
>gid:851900  HI0334  GTP pyrophosphokinase (relA)
MVAVRGSHLLNPQDFVIEQWCTGLKLAEQTEKSLIDAWYYARDLMNAYPD
EMKNATLMLQSGVEMVEILHELNMDAETLLTAMLFPIVANKLTDWESLKE
KFGAKITKLLKGVLEMDNIRQLNASHSANALQVDNVRRMLLAMVDDFRCV
IIKLAERITFLRDAEHRCAEEDKVLAVKECSYIYAPLANRLGIGQLKWEL
EDYCFRYLHPEQYRAIAKLLQERRLDREHYIADFVSELSGYLRENIEQVE
VYGRPKHIYSIWRKMQKKHLEFSGLYDVRAVRIIVQKLQDCYTALGIVHT
QFKHLPKEFDDYVANPKPNGYQSIHTVVLGKGGKPIEVQIRTQQMHDDAE
LGMAAHWKYKEGNTGSMSAYEEKIAWLRKLLAWQDDITDSGEVLAELRSQ
VFDDRVYVFTPKGEVVDLPTGSTPLDFAYAIHSEIGHRCIGAKVAGRIVP
FTYQLQMGDQIDIITQKNPNPSRDWLNPNLGFTHTAKSRAKIQAWFKKQD
RDKNIPAGKELLDNELALLNLSIKQVEPYALPRYNLKNLDDLYAGIGSGD
IRLNNLIHFLQSKLIKVTAEEADQEILRHVANKSAVNSQQKSEKNNGCVI
VEGVDNLMHHIARCCQPIPGDAIVGYITMGRGISIHRADCEQFLDLQAAH
PERVVESIWGENYASGFHINIRIVAGDRNGLLRDITTVLANEKISVLGVS
SRADTKKQLATIDMEIELHNVESLSKILARLAKLDDVIEAKRL
>gid:851922  HI0358  transcriptional activator, putative
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYS
RAFALGVFKAKNFAEMETPRKTLEILCQEIQLHLNYCREWGISEQEIFTT
QESAACIAYTRYLLDCGMTGSLAELYAAVTPCALGYAQVARYITQHYPRL
PNNPYQTWIDTYASEEFQQAAQETVDFLTALCKPLNPSQLAEIQQIFTTA
TRMEIAFWQMGLDLA
>gid:851942  HI0379  conserved hypothetical protein
MKLTSKGRYAVTAVLDIALNADGGPVSLADISERQHISLSYLEQLFAKLR
KDGLVKSVRGPGGGYQLGLPSEQISVGMIIAAVNENIHVTKCLGRENCKN
GVECLTHELWEDLSLRIESFLNEITLAELVNKRNVKRQSHRDFNNLLVNQ
>gid:851951  HI0387  ATP-dependent helicase (dinG)
MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIE
AGTGTGKTFAYLAPALVFGKKTIISTGSKNLQDQLFNRDLPAIKKALNFT
GKIALLKGRANYLCLERLDQVIAQGVLGDKSVLAELSKVRKWNNSTKTGD
FTECIELAEDSPIIPQLTSTAESCLGTDCPNYSECYVASARKKALNADLV
VVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIASQYFGQSLTS
RQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRG
NWRELYTQSAVKKAFELLQEKIDFLSEVIKLALGRSQTLDSIFERVESIK
IQLKRLSETNIVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWI
FTSATLEVGGTFNHFCQRLGIENATQKILYSPFNYPEQSLLCVPRYLPNT
NQMNTLNSLGEILLPVIEANKGRCFVLCTSYSMMRGLAEYFREKSHLSIL
LQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALSLVIIDKLPFT
APDEPLLKARIEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGV
VIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK
>gid:851975  HI0410  transcriptional regulatory protein (tyrR)
MTISKFNPQKPFECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKD
LLAKACHYQSLRRDKKFIAVNCAGLPDEDAESEMFGRKVGDSETIGFFEY
ANKGTVLLDGIAELSLSLQAKLLRFLTDGSFRRVGEEKEHYANVRVICTS
QVPLHLLVEQGKVRADLFHRLNVLTINVPALRDRMADIEPLAQGFLQEIS
EELKIAKPTFDKDFLLYLQKYDWKGNVRELYNTLYRACSLVQDNHLTIES
LNLALPQSAVISLDEFENKTLDEIIGFYEAQVLKLFYAEYPSTRKLAQRL
GVSHTAIANKLKQYGIGK
>gid:851987  HI0422  ATP-dependent RNA helicase (srmB)
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPT
GTGKTAAFLLPALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELA
QFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRS
VEMLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFA
ERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLARFIETEEVTR
GIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVS
FVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREEKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV
>gid:851991  HI0426  fatty acid metabolism regulator protein (fadR)
MQNNNDILKAQSPAALAEEYIVKSIWQDVFPAGSNLPSERDLADKIGVTR
TTLREVLQRLARDGWLTIQHGKPTKVNNIWDAAGPNIIETLIALDMQSAP
LIIDNMLSLRSKMSESYIYEAVKNSPQKSTALFAELEQLQNTAQDYTEFD
YQLFRQFTVVANKPFYRLIFNSLKGVYQRIGLLFFKEKKHRELTKQFYLE
MQQICLEGNADAVVDCIRKHNLRSSTYWKAILERLPQNLSD
>gid:852017  HI0451  conserved hypothetical protein
MELRQQIPTGCIKQFGQFGVPYVVGEVAEFLPDGDVLVNITLLQSGEKDI
YRLSHLLEDPEAE
>gid:852071  HI0506  rbs repressor (rbsR)
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAV
ARSLKVRETKTIGLLVTATNNPFFAEVMAGVEQYCQKNQYNLIIATTGGD
AKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTEL
NADKILENSALGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNA
LSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAVFCCSDTIAVG
AYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVE
TLLQRIKNPNENYRTLVLEPTCVLRESIYSLK
>gid:852079  HI0514  DNA-directed RNA polymerase, beta' chain (rpoC)
MKDLVKFLKAQSKTSEDFDVIKIGLASPDMIRSWSFGEVKKPETINYRTF
KPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRR
ERMGHIELASPVAHIWFLKSLPSRIGLLLDMPLRDIERVLYFEMYIVTEP
GMTDLERGQLLTEEQYLDAEDRWQDEFEAKMGAEAIQDLLKGMDLEAECE
KLREELQETNSETKRKKITKRLKLLEAFVQSGNKPEWMVMTVLPVLPPDL
RPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDY
SGRSVITVGPYLHLHQCGLPKKMALELFRPFIYAKLESRGYATTIKAAKK
MVEREDAIVWDILAEVIREHPILLNRAPTLHRLGIQAFEPILIEGKAIQL
HPLVCAAFNADFDGDQMAVHVPLTLEAQLEARALMMSTNNVLSPANGDPI
IVPSQDVVLGLYYMTREKVNGKGEGMLLQDPREAEKAYRTGEAELHSRVK
VRITEYVKNEAGEFDAKTTLTDTTIGRAILWMIAPKGMPYSLFNQTLGKK
AISKLINEAYRRLGLKEAVMFADQIMYTGFAYAARSGSSVGIDDMEIPAK
KYEIISAAEEEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMME
NLSQEEVINREGNPEKQASFNSIFMMADSGARGSAAQIRQLAGMRGLMAR
PDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRR
LVDVAQDLVIVEDDCGTHEGLVMTPLIEGGDEKVPLRELVLGRVAAEDIL
KPGTEEVLIPRNTLLDEKLCDVLDANSVDSVKVRSVVTCDTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESS
VQVKNTGTVHLMNAKFVTNDESKLVLTSRNTELTITDAFGRTKEHYKVPY
GAVLSKGDGQEVTAGETIANWDPHTMPVVSEVSGFVKFVDIIDGLTVTRQ
TDELTGLSSIVVQDVGERATAGKDLRPTIKLVDANGNDIFLPETDVLAQY
FLPGKAIVSLDDGTAVKVGEPLARIPQESVGTKDITGGLPRVADLFEARK
PKEPAILAEISGIVSFGKETKGKRRLLITPAEGETYEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVRAVTEYIVNEVQDVYRLQGVKIND
KHIEVIVRQMLRKAVITKAYDSEFLEGEQVEVARVKIVNRQREAEGKPPV
EFERELLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKEN
VIVGRLIPAGTGFAYHQNRHKHRLVDDVVAKLSEEDEAAIADEFVITADD
ATQNLATLLNSEIED
>gid:852080  HI0515  DNA-directed RNA polymerase, beta chain (rpoB)
MGYSYSEKKRIRKDFGKRPQVLNVPYLLTIQLDSFDKFIQKDPEGQQGLE
AAFRSVFPIVSNNGYTELQYVDYRLEEPEFDVRECQIRGSTYAAGLRVKL
RLVSYDKESSSRAVKDIKENEVYMGEIPLMTDNGTFVINGTERVIVSQLH
RSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDR
RRKLPATIILRALGYTTEEILNLFFDKITFEIAGDKLLMTLVPERLRGET
ASFDIEANGKVYVERGRRITARHIKALEKDNISQVVVPSEYILGKVASKD
YVDLESGEIICPANGEISLETLAKLAQAGYTTIETLFTNDLDYGPYISET
LRVDPTYDKTSALYEIYRMMRPGEPPTPESSEALFNNLFFSAERYDLSTV
GRMKFNRSLAFPEGEGAGILSNEDIIAVMRKLIDIRNGRGEVDDIDHLGN
RRIRSVGEMAENQFRIGLVRVERAVKERLSLGDLDAITPQDLINPKPISA
AVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDV
HNTHYGRLCPIETPEGPNIGLINSLSAFARTNDYGFLETPYRKVVDGQVT
EEIEYLSVIDEANYIIAQANSNLDENNRFTDAFVTARGERGESGLYKPED
IHYMDVSTQQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPL
VGTGMEKPIALDSGVAVVAKRGGTVQYVDASRIVIKVNEDETIAGEAGID
IYNLIKYTRSNQNTCINQIPCVNLGDPINRGEVLADGPSTDLGELALGQN
IRVAFMPWNGYNFEDSMLVSERVVQQDRFTTIHIQELSCVARDTKLGAEE
ITADIPNVGESALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRDGVEKDKRALEIE
EMQLREAKKDLTEELEILEAGLFARVRNLLISSGADAAQLDKLDRTKWLE
QTIADEEKQNQLEQLAEQYEELRKEFEHKLEVKRKKIIKGDDLAPGVLKV
VKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVEIVLN
PLGVPSRMNIGQILETHLGLAAKGIGDQINAMLKQKQEVEKLRSYIQKAY
DLLGNGSQKVDLSTFTDEEVLRLAGNLRKGLPVATPVFDGADEAEIKELL
KLGGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTG
SYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVN
GRTKMYKNIVSGNQHMEPGTPESFNVIMKEIRSLGLNIELDEE
>gid:852098  HI0533  RNA polymerase sigma-70 factor (rpoD)
MEKNQQSTAEQYSEQIEQLMELGRTQGYLTFAEINDLLPEDAIDPEYYDK
LLQTLQNDAGIPVLDEAPESDDMMLSDTIPDEDAVEEATQILSNVESEIG
RTTDPVRMYMREMGTVDLLTREDEISIAKRIEGGIDEVQTSISAYPEALN
GLLKNYDDVEKGNFRLTDLITGFVDPNAEIEEHNGLDEDFSDEDDEEESS
NADVEDNEDEEDNESESTSDSSDSDNSIDPEVAREKFQQLREQHSKTLAV
IEKHGRSGKRAQDQIALLGEIFKQFRLVPKQFDLLVLSMKEMMKRVRYQE
RQLQKILVDIAGMPKDDFEKIITTNGSNSEWVAKALKSSKPWAKRLIKYE
DRIYEALNNLAITEENTKLTITQMRDICDAVARGEQKARRAKKEMVEANL
RLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWW
IRQAITRSIADQARTIRIPVHMIETINKLNRISRQLLQEMGREATPEELA
ERMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFIEDSTLELPLDS
ATAQSLKVATHEVLEGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTR
ERIRQIEAKALRKLRHPSRSETLRSFLDE
>gid:852101  HI0536  urease accessory protein (ureG)
MSNTVATMINKRNIMRNYIKIGVAGPVGAGKTALIEKLTREIASKYSVAV
ITNDIYTQEDAEFLTKNSLLPPERIMGVETGGCPHTAIREDASMNLEAVD
EMVTRFPDVEIVFIESGGDNLSATFSPDLADVTIFVIDVAQGEKIPRKGG
PGITRSDLLVINKTDLAPFVGADLSVMERDARRMRNGQPFIFTNLMKKEN
LDGVIGWIEKYALLKNVEEPASLVR
>gid:852128  HI0563  transcriptional regulatory protein (asnC)
MHNIDSLDQKILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQSGII
KGTKVIIDERKLGYDVCCFIGIILKSAKDYEKVIKKLESFDEVVEAYYTT
GNYSIFLKVMTHTIAELHSVLATKIQLIDEIQSTETLISMQNPILRDIKP
>gid:852133  HI0568  transcription accessory protein (tex)
MLNQQISQIIAAELTVQPQQIFAAIQLLDDGNTIPFIARYRKEATGGLDD
TQLRHFETRLIYLRELEDRRQTILKSIEEQGKLTDELRDKIHATQSKTEL
EDLYLPYKPKRRTKGQIAIEAGLEPLANLLWNEPKNDPESTALSFVDAEK
GVADSKAALDGARIILMERFAEDAGLLAKVRDYLAKNAVIVSKVIEGKET
EGAKFQDYFDHQELLKNVPSHRALAMFRGRNEGILQLSLNADPDAEEGSR
QSYCEEIIRDYLDVRFTGQPADKWREQVIAWTWKIKVSLHLETELMASLR
EKAEEEAIDVFARNLTALLMAAPAGAKSTMGLDPGLRTGVKVAMVDNTGK
LLDTTTIYPHTGREAEAQVAIFSLIRKHNVELIAIGNGTASRETERFAKD
VIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIARRL
QDPLAELVKIEPKAIGVGQYQHDVNQTQLARKLDAVVEDCVNAVGVDLNT
ASAPLLARVAGMTKTLAQNIVEYRDENGRFESRSELKKVPRLGPKAFEQC
AGFMRIANGKNPLDASGVHPEAYPVVEKILQATAQSIQDLMSNAGVVRQL
DAKQFIDEQFGLPTVQDIFKELEKPGRDPRGEFKTAVFAEGVEEITDLKS
GMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNI
VKVKVLEVDVPRKRIALTMRLDESAVKNDSKSDRTLSTRPRGNMQREARN
SRGNNVIGNAFA
>gid:852134  HI0569  transcription elongation factor (greB)
MAKSNYITRQGWLALDQELKFLWKEERPKVTQAVSDAAALGDRSENAEYI
YGKRRLREIDRRVRFLTKRLEVLQIVDYNPKQEGKVFFGAWVELENEEGE
TKQYRIVGCDEFAPAKNWISIDSPVARALIGKTLDDEVRVETPSGFITLY
VNKIWYEK
>gid:852135  HI0570  conserved hypothetical protein
MAGVRAVQKEKTRRALVDAAFNQLSAEKSFSNLSLREVAREAGIAPTSFY
RHFSDMDELGLEMVDEAGLMLRQLMRQARKRIDAGGSVISVSVDTFFEFI
TNSTNVFRLLLRESSGTSQAFRTAAAREIKHFVDELAEYISYKHQYSQYV
AYVQAEGIVTIVFTAGANALDMSKAEREQLKARVILQLRMLAKGADFAAN
KERGK
>gid:852136  HI0571  hydrogen peroxide-inducible genes activator (oxyR)
MNIRDLEYLVALSEYKHFRRAADSCNVSQPTLSGQIRKLEDELGIILLER
TSRKVLFTQSGMLLVDQARTVLREVKLLKEMASNQGKEMTGPLHIGLIPT
VGPYLLPYIVPMLKAAFPDLEVFLYEAQTHQLLEQLETGRLDCAIVATVP
ETEAFIEVPIFNEKMLLAVSEHHPWAQESKLPMNQLNGQEMLMLDDGHCL
RNQALDYCFTAGAKENSHFQATSLETLRNMVAANAGITFMPELAVLNEGT
RKGVKYIPCYSPEPSRTIALVYRPGSPLRNRYERVASAVSDEVKSILDGL
K
>gid:852166  HI0601  DNA transformation protein (tfoX)
MNIKDEHIDSVCSLLDQLVGNVSFKNLFTGYGLFHKEETMFAIWQNKKLY
LRGEGVLAIQLTKLGCEPFTTNELNKRFVLSQYYALSDQILRSNRLCRKL
IILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITNVAMLRE
IGAENALVELKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLN
EVWRKNGLKGYRKLDDE
>gid:852186  HI0615  L-fucose operon activator (fucR)
MNYRDELILQWVNQQGKASVIELAQHCDISVETIRRDLNKLANKGLLHRT
HGGAVSNKTKDLGSFFQTRKHINATAKRHIAQKALDLLYENAVIGLDASS
TSWYFAYLMPDIPCTVVTNSMFNINALVNKSNVKTIVTGGVYSAKYEAFY
GPLSEYLLQRLHINFSVFSCSGIDKNGNIWESNELNASLKRKMMEASERA
YLLIDSSKFEKTSLIQLADLSKINTIFSDRSLPDNLQKYCEQHDIMTVL
>gid:852187  HI0616  ATP-dependent helicase (hepA)
MPFAIGQRWLSESENALGLGVITALDQRTVTIYFPAADETRIYAMAQAPL
SRIVFSKGETLSHQAGWQGEILDVQNMNGLLFYLVKNPQDEDVIVQERDI
SPIISFSQAKDRLFSAQIDRSTHFALRYRTLCHQQAQFKSPLRGLRGTRA
SLIPHQLHIAAEVGNRVNPRVLLADEVGLGKTIEAGMILQNQLFAEKVQR
VLIIVPETLQHQWLVEMLRRFNLHFALFDEERCNDFDLDAVNPFTTESLI
ICSLNWLETHPNRVELVLNAQFDCLIVDEAHHLVWSETSPSTAYLLVEQL
ARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPV
VNAVESLLANKALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQ
ELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDF
LKLHRNEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAA
AYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNPDLLEQCIGRL
DRIGQKRDVQVYVPCAKDSPQSRLARWYNEGLNAFEQTCPMGMALFSQFA
DELEKVRSNSTALSENEFSGLLKQTKTAREKLKIELEKGRDRLLELNSHG
GEQAQALADQIADEDNSPELVNFALKLFDIIGVEQEDLGANSIVISPTGT
MLVPDFPGLKEEGVTVTFDRELALAREEMEFLTWDHPMIRQGIDLVASGD
IGKAAMALLVNKQLPAGTLLIELIYVVESQSPKGLQLNRFLPPTPIRLLL
DNKGNNIGEQVAFETLHSKLKPLGKNITNQMVKMARSNIESLIMRGDQLV
KSLAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQ
SLDELSKANWRLDCLRVIVTNKE
>gid:852190  HI0619  glycerol-3-phosphate regulon repressor (glpR)
MKQSLRHQKIIKLVEQSGYLSTEELVAALDVSPQTIRRDLNILAELDLIR
RHHGGAASPSSAENSDYVDRKQFFSLQKNNIAQEVAKLIPNGASLFIDIG
TTPEAVANALLGHEKLRIVTNNLNAAHLLRQNESFDIVMAGGSLRMDGGI
IGEATVNFISQFRLDFGILGISAIDADGSLLDYDYHEVQVKRAIIESSRQ
TLLVADHSKFTRQAIVRLGELSDVEYLFTGDVPEGIVNYLKEQKTKLVLC
NGKVR
>gid:852204  HI0628  RNA polymerase sigma-E factor (rpoE)
MAEQLTDQALVERVQQGDKKAFNLLVSRYQNKVAGLLTRYVSRNDIPDVV
QESFIKAYRSIESFRGESAFYTWLYRIAVNTAKNYLTAQGRRPPNEDILA
EDAENYDVGTHLRDVDTPENEMLSSELERIVFDTIHNLPEDLKTAITLRE
LEGLSYEDIAEIMDCPVGTVRSRIFRAREMIENKIQPLM
>gid:852238  HI0659  H. influenzae predicted coding region HI0659
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQ
LETLSGVKQPMIARIEKGQTNPQLETLLKLLAPLGKTLSIVPLRVKNA
>gid:852245  HI0666.1  H. influenzae predicted coding region HI0666.1
MDNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLND
KRKSLGIELSMLELQTGVSISTLNRLFQDPSQVRFTTVFLVAQTLGVSLC
AI
>gid:852256  HI0677  H. influenzae predicted coding region HI0677
MKLFKAEQWNIEVLLPLFEAYRQAYGQAENPERTLAFLTNRMRFNESLFF
IAVDENEKAIGFVQLFPRLSSLQLQRYWQITDIFVLEHAQQTEIYAALIS
KAKDFVHFTQSNRLVAELAQNQYSMLESEGFKLNPKERLFELSLSC
>gid:852260  HI0681  transcriptional activator (ilvY)
MEFTDLQIFIHLSDTKNFTKTATQNHMSPSTLSRQIQRLEDELGKTLFIR
DNRQVKLTEYGEKFLQFAKTEWQNWQQFKQQLKDESDELCGEIKLFCSVT
ASYSHLPHVLKEFRQRYPKVEIQLTTGDPALALELIQAQQVDLALAGKPN
NLPSSVVFHKIDDISLSLIAPRVACLATQLLQEKPIDWQQMPFIFPVEGH
ARQRIEQWLREKQIKHPKIYATVAGHEGIVPMVGLGFGLAMLPDAVIDSS
PMNNQISRLNLDKPIEPFELGICTQKRNLEQPLVRAFWAMLE
>gid:852295  HI0717  transcription antitermination protein (nusG)
MTEETTVSKKRWYVLQAFSGFESRVALTLREYIKQQQMEDQFGEVLVPTE
EVVENVAGKRRKSERKFFPGYVLVEMEMNDETWHLVKSVPRVMGFIGGTP
DKPAPISKREADTILNRLEQNTDKPRHRNEYHPGEEVRVTEGPFADFNGT
VEEVDYEKGRLKVSVSMFGRATPVELEFGQVEKIH
>gid:852308  HI0726  nitrate/nitrite response regulator protein (narP)
MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTS
PDVIILDLNMKGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAG
ADGYLLKDTEPDTLLEQIKRIAQGEVILSDSIKNLLLERTHEDNPLDSLT
DREMGVLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAAT
VLFFEQNR
>gid:852332  HI0749  lexA repressor (lexA)
MYMRPLTARQQEVLDLLKRHLETTGMPPTRAEISRELGFKSANAAEEHLK
ALSRKGAIEIIPGASRGIRILDNSSNDEFDGLPLVGRVRAGEPILAEQHI
EATYRVDADMFKPQADFLLKVYGLSMKNVGILDGDLLAVHSTKDVRNGQI
VVARIEDEVTVKRLEKKGSIIYLHAENEEFDPIVVNLEEQKNFEIEGIAV
GIIRNNAWM
>gid:852358  HI0775  transcriptional regulator
MLYFVKMAVLRGVKMMDIRHLRYFVSIVDNDFNLSRASQNLYVSQPALSM
MITEFENRENIQIFKRASGKIIGLTFAGENYYRDAKEVIKRYNDMRTNLY
KSKDCKKGTITIGIPPLVLSAVFSSVLPHLILKNPDINFIIKEIGAYALK
SELLLDKVDLAVLLYPERISKNIIDSIEIHSSELALFLSPKHVLAKKQQI
TWADLHQQKMAIFDQTFMIHHHLKEAFERNNCYPDIVLDSSCWDFLLSAV
KTNKELLTILPLPMAELYHSKEFLCRKIESPVPWKVTLCRQRKTVYTHLE
EYIFDKLLEAFRPTK
>gid:852386  HI0802  DNA-directed RNA polymerase, alpha chain (rpoA)
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSS
MPGCAVTEVEIDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVIL
TLNKSGIGPVVAADITYDGDVEIVNPDHVICHLTDENASISMRIRVQRGR
GYVPASSRTHTQEERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKL
VIELETNGALEPEEAIRRAATILAEQLDAFVDLRDVRQPEIKEEKPEFXP
ILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASIAED
>gid:852405  HI0821  galactose operon repressor (galR)
MSTIRDVAKLANVSVATVSRVLNHSLSVSENTRLVVEQAIAQLAYQPNAN
AQALAVQNTDTIGVVVTDVTDAFFAILVKAVDKVAEAHQKTILIGIGYHH
AEKEREAINTLLRKRCSSLVVHSKALSDDELSHYLNTVQGMVIINRVIKG
YEHRCVSLDNQKGTYLATEMLIRYGHQHIAYIGSNHAIFDEVERRNGYLA
ALKDHNYPIIEQAITLNSPDFEGGEKAMIDLLSYNKNLTAVVAYNDSMAA
GAISVLNENNISVPSQFSIIGFDDMPIARYLIPKLTTIRYPIDLMATYAA
KLALSLTDEKIITPPVVQFNPTLVRRFSVESR
>gid:852414  HI0830  trp operon repressor (trpR)
MYISRNLEQWNAFLQMLKIAFEENKAQEFLTLLLTADERDAVGLRLQIVS
QLIDKNMPQREIQQNLNTSAATITRGSNMIKTMDPDFMQWMKQHLDLIEK
N
>gid:852421  HI0837  response regulator (cpxR)
MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLL
DVMMPKLNGIETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPK
PFNDRELIARIKAILRRSASPSNNISNVEILSFDGITLHFSHGIATYNEE
NLNLTDYEFKILCLLLKSKGNVVSREELSLEVMEKPLTPFDRSLDMHISN
LRRKLPKRKNKPSWFKTLRGKGYALVT
>gid:852445  HI0861  virulence-associated protein (vacB)
MTKKRKNLINQDPHYKRELEKYGNPIPSREFILTVIRDNNAPMNRDEILT
ALSIRNEDQIEAMRRRLRAMENDGQLVFTKRKRYALPEKLDLFKGTVIGH
REGFGFLQVDGKKDDLFIPNHQMQRVMHGDFVLAQPAGLDRRGRREVRIV
RVLESRKKQIVGRFFLENGFGYVVPDDSRIGRDILVPNEHRNGARMGQVV
VVELQERSASFNQPIGVITEILGDNMAKGMEVEIALRNHDILHKFPSAVE
KYVKKFTEEVSEEAKKGRVDLRNLPLVTIDGEDARDFDDAVYCEKHGKGW
KLWVAIADVSYYVRLRSTLDVEAHNRGNSVYFPNRVVPMLPEILSNGLCS
LNPQVDRLCMVCEMQISAKGKLTDYRFYEAVMNSHARLTYTKVAKMLEGD
EELRTRYSTLVPHLEELYKLYQALLSARHQRGAIDFETIETKFIFNAMGR
IERIEPVVRNDAXKIIEECMXLANIAAANFMEKHKEPALYRIHATPSEEK
LTSFRTFLSEFGLTLEGGLKPTTKDYAALLEKVKERPDHELIQTMLLRSL
SQAVYHADNIGHFGLALEEYAHFTSPIRRYPDLTLHRGIKYLLAKEQGAK
RKTTDTGGYHYSFDEMDLLGNHCSMTERRADDATREVADWLKCEYMQDHV
GGEFSGVISSVTGFGLFVRLDDLFIDGLVHISTLENDYYQFDAAKQRLIG
ENSGMQYRLGDKVRIKVEAVHLENKMVDFSLIGSERKPRRAGKTAKEKAK
KVFKELPSKASKKRKSAVKKKDVSKKTSRKRK
>gid:852469  HI0884  aerobic respiration control protein ARCA (arcA)
MTTPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINL
VVMDINLPGKNGLLLARELREELSLPLIFLTGRDNEVDKILGLEIGADDY
LTKPFNPRELTIRARNLLHRAMPHQEKENTFGREFYRFNGWKLDLNSHSL
ITPEGQEFKLPRSEFRAMLHFCENPGKLQTREELLKKMTGRELKPQDRTV
DVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDIE
>gid:852477  HI0892  ATP-dependent RNA helicase (rhlB)
MIFMQQDYLSQQRFSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGR
DVAGQAQTGTGKTMAFLTATFHHLLTHQDPNLKYPHPRALILAPTRELAV
QISNDAEFLAKASGLKTALAYGGDGYDKQLQAIERGVDILIGTTGRVIDY
VKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRYLLRKCPAPQARLTMLFS
ATLSYKVRELAFEDMNEPEYIEIEPEQKTGHRIKEELFYPSNQDKMALLL
TLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSL
LKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTG
RAGESGVSISFACEEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRL
KRAVPPQGHTRHRSYHAK
>gid:852478  HI0893  transcriptional repressor (Bm3R1)
MRQAKTDLAEQIFSATDRLMAREGLNQLSMLKLAKEANVAAGTIYLYFKN
KDELLEQFAHRVFSMFMATLEKDFDETKPFFEQYRQMWKNIWYFLQENPT
ILSNLKQYESLPNFKDICKNIKNCRWDLFCHQAQKAGLLAELSEDILFLL
SLKTAINLASDAKFIDFDLKPEILESVIERSWRAIQK
>gid:852527  HI0943  conserved hypothetical protein
MHCPFCDTEETKVIDSRLVSDGYQVRRRRECGHCHERFTTFEMAELIIPK
IIKTDGTREPFNEDKLRSGIQHALEKRPVSADDVEKAINHIILQLRATGE
REVPSKLVGKLAMNELKKLDKVAYIRFASVYLSFDDIDQFTIEIEKLKD
>gid:852540  HI0955  transcriptional regulator (ttk)
MVEEQLSLSGVEEIAPKIETPKIEKRTVKERRQQVLTVLIHMLHSERGME
RMTTARLAKEVGVSEAALYRYFPSKTKMFEALIEHIESTLLSRITASMRN
ETQTMNRIHDILQTILDFARKNPGLTRVLTGHALMFEEAQLQARVAQFFD
RLEMQFVNILQMRKLREGRAFNVDERIIASHLVTLCEGQFMRYVRTNFRL
NSSQSFEQQWRFIEPLFA
>gid:852567  HI0980  Hin recombinational enhancer binding protein (fis)
MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVND
LYELVLAEVEHPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG
>gid:852595  HI1009  glycerol-3-phosphate regulon repressor (glpR)
MEKKMIPAERQKTLLNLISKQSVISINNLVNILGVSHMTVRRDIQKLEED
GKVISVSGGVQLLERLSSEPTHDDKSLLATTEKTAISKKAVELIQEHSTI
YLDAGTTTLEIAKQIANRNDLLVITNDFVIAHYLMVNSQCNIMHTGGLIN
KSNRSSVGEFAAQFLHQISVDIAFISTSSWNLKGLTTPDEQKIPVKKAII
QFSQKNILVTDSSKYGKVATFLLYPLSSLDTIICDKGLPENAQARIAEMN
VELFLV
>gid:852618  HI1032  transcriptional regulator, putative
MNIEVKMEKEKSLGNQALIRGLRLLDILSNYPNGCPLAKLAELANLNKST
AHRLLQGLQNEGYVKPANAAGSYRLTIKCLSIGQKVLSSMNIIHVASPYL
EQLNLKLGETINFSKREDDHAIMIYKLEPTNGMLKTRAYIGQYLKLYCSA
MGKIFLAYEKKVDYLSHYWQSHQREIKKLTRYTITELDDIKLELETIRQT
AYAMDREENELGVTCIACPIFDSFGQVEYAISVSMSIYRLNKFGTDAFLQ
EIRKTAEQISLELGYENI
>gid:852638  HI1052  transcriptional regulator, araC family, putative
MDYLDKLTHLAQVRGEINIRCEFQGEWQISHQEKDAGKGIFHLIEQGECW
LTLNEKQFHLKEGDVFFLPQNQPHSMHYSANKRADIPTKKSHQGLFELHQ
IGRGTPDLKMFCGNFYYQQDALLTASMPEYLHINLCDTPIHPLVQLFLQE
AQKNDAGTKSVVDALSNVLLIYILRHAIQQNLIEQGILFALQDKRLNTAL
IAILQQPQNDWHIEQLAELATMSRANFIRIFQQHIGMSPGRFLTKVRLQS
AAFLLKQSQQSVLAIALEVGYQSEAHFCKVFKNYYQLSPSQYRKSVSL
>gid:852666  HI1082  conserved hypothetical protein
MELQKIEQILKDTLNIAEVYAQGENAHFGVIVVSDEIAALSRVKQQQTIY
APLMPYFSTGEIHALTIKTYTVEKWKRDRALNQFN
>gid:852689  HI1106  xylose operon regluatory protein (xylR)
MTEQYYKIALLFNANKVYDRQVVEGIGQYIQASQCMWDIFVEDEFIYHTD
TINQLSIDGIIADFDDPKTVELLQHTLIPTIAVGGSYKQADFYPHFPYIA
TDNMALVEMALSHLQEKGLSQFAFYGLQVNTHKHWSIERRDAFVELMEKN
HYPIYLYEGVQVHAQNWLEEQQKLIVWLKSLPSHTGIIAVTDARARHLLQ
ACEYSKIAVPEELCVVGIDNEELIQYLSRMSLSSVEQGTREIGYQAAKLL
HKLLNGQKVSHTPILIPPITVHSRNSTDYRSLTDPLVIQAMHYIRHRACH
RIKVGQVLDHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTD
ISIKEITEICGYPSIQYFYSVFKKEFEMTPKEFRLNC
>gid:852777  HI1194  glycine cleavage system transcriptional activator (gcvA)
MEILMYKRLPPLNSLKSFESAARYLSFTKAADELCVTQAAVSHQIKLLEX
FLGIDLFKRKNRSLELTELGKAYFVDINKILRRLNEATERLLTLKTDPHL
NISVPQTFGIQWLVPHLSEFNQLYPQIEVRLTGVDQDEGLLNKEIDLAIY
YGLGNWQNLQVDRLCEENLLILASPELLAENPIIQPEDLKKHTLIHIHTC
DNWQAMANHLQLDDLNIQQGPLFSHTFMALQAAIHGQGIVLANRLLALQE
IENGSLQAVLPTNLPDPKSFYVVNHLDRLDDQKIQAFRQWIINSIKQEEN
E
>gid:852783  HI1200  cys regulon transcriptional activator (cysB)
MKMHQLRYIVEIVNQNLNVTEAANALYTSQPGISKQVRLLEDELGLEIFE
RHGKHIKSITPAGKKIISIARELLVKAQGIRAVADEYTRPNHGVLRIATT
NTQARYMLPSVIERFSKKYPDVSLHIHQGSPTQIHDALMSGEVDLAITTE
APYLFDDLVQIPCYWWNRAVIVSPEHPLAKVKELTIEELGKYPLVTYTFG
FTGVSDLDYAFNSAGILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTA
LDTDLVLIDASHLFRPSMTNIAFKHSTFLRNYMYDFMEYFSPHLTRSVVE
KAERLRDNNSVKKLFEGIELETK
>gid:852792  HI1209  arginine repressor (argR)
MTENLTRAFKELLNQERFGSQSEIVDALKKQGFTGINQSKISRMLSKFGA
VRTRNTKMEMVYCLPNELSVPNTSSPLKNLVLDVDHNAMLIVIKTTPGAA
QLIARLLDSIGKSEGILGTIAGDDTIFVTPTNNKPIDELLQNIQRLFENT
L
>gid:852841  HI1258  transcription-repair coupling factor (mfd)
MKTAFFQPDIPTQPNDHKILGNVLPGADALAISEISEQNQNLTVVVTPDT
RSAVRLSRVLSELSSQDVCLFPDWETLPYDTFSPHQEIISSRLSALFHLQ
NAKKGIFLLPISTLMQRLCPPQYLQHNVLLIKKGDRLVIDKMRLQLEAAG
YRAVEQVLEHGEYAVRGALLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDT
QRTLDEISSINLLPAHEFPTDDKGIEFFRAQFRETFGEIRRDPEHIYQQI
SKGTLISGIEYWQPLFFAEMATLFDYLPEQTLFVDMENNQTQGERFYQDA
KQRYEQRKVDPMRPLLSPEKLWLNVDEVNRRLKSYPRITFKAEKVRSSVR
QKNLPVAALPEVTIQSQQKEPLGQLRQFIEHFKGNVLFSVETEGRRETLL
DLLSPLKLKPKQIQSLEQIENEKFSLLVSSLEQGFIIEQSLPVAIIGEAN
LLGKRIQQRSRDKRKTINPDTLVRNLAELKIGQPVVHLDHGVGRYGGLVT
LDTGGIKAEYLLLNYANESKLYVPVTSLHLISRYVGGSDESAPLHKLGNE
AWAKSRQKAAEKIRDVAAELLDVYAQREAKKGFAFKYDREEFQQFSATFP
FEETYDQEMAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMN
HKQVAVLVPTTLLAQQHYENFKDRFANLPVNVEVLSRFKTAKEQKQILEN
LAEGKVDILIGTHKLIQSDVKFNDLGLLIIDEEHRFGVGQKEKIKQLRAN
IDILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLSIKTFVRQNDDLVV
REAILREILRGGQVYYLHNDVASIENTAEKLTALVPEARVIVGHGQMRER
ELERVMSDFYHQRYNVLVCSTIIETGIDVPTANTIIIERADHFGLAQLHQ
LRGRVGRSHHQAYAYLLTPPPKMMTKDAERRLDALENLDNLGAGFILATH
DLEIRGAGELLGNEQSGQIESIGFSLYMELLDAAVKALKEGREPSLEELT
QQQADIELRVPALLPDDYLGDVNMRLSFYKRIAAAESKAELDELKVELID
RFGLLPDATKNLLQITELRLLVEPLNVVRIDAGTQGGFIEFSAKAQVNPD
KFIQLIQKEPIVYRFDGPFKFKFMKDLSDNKVRLEFVVDLLRTIAA
>gid:852864  HI1283  N utilization substance protein A (nusA)
MSKEILLAAEAVSNEKLLPREKIFEALESAIAISTKKKFEYETDIRVSIN
PKTGEFDTFRRWLVVDEVKVPTKEITLEAAQFDDPNLQLGEYVEDQIESI
AFDRIAMQTARQVISTKIREAERAKVVEQFREEEGKIVTGTVKKVSRDSI
ILDLGNKAEAMIAREDMLPRENFRPGDRVRGVLYKVNPEGKTAQLFVTRS
KPEMLIELFRIEVPEIGEEMIEIRGAARDAGSRAKIAVKSNDKRIDPVGA
CVGMRGARVQVITNELGGERVDIVLWDDNPAQFVINAMAPADVSSIIVDE
DNHSMDIAVEADNLAQAIGRNGQNVRLATQLTGWTLNVMTTDELNAKHQA
EDNKVLNLFINALELDEEFAQILVEEGFTSLEEIAYVPMNELTAIDGLED
EDLVEELQTRAKNAITAAAVAEEEALKKANVEDRLLNLEGMNRHVAIKLA
EKQITTLEELAEQGVDDLTDIEELTAEQAADLIMAARNICWFGEE
>gid:852884  HI1304  N utilization substance protein B (nusB)
MTEQKQVKKPSARRRARECTVQALYSWAVSGNTAEQVELAFVLDQDMDGV
DKPYFRKLFRQTIENIETVDFSISPYIDRAFDELDPIETAILRLAVYELR
FELDVPYKVVINEAIEVAKVFGADESHKYINGVLDKIAPALGRK
>gid:852912  HI1331  transcription elongation factor (greA)
MQQIPMTVRGAEQLREELDFLKNVRRPEIIKAIAEAREHGDLKENAEYHA
AREQQGFCEGRIQEIEGKLGNAQIIDVSKMPNNGKVIFGATVVLVNTNTD
EEVTYRIVGDDEADIKSGLISVNSPIARGLIGKELDDTVNITTPGGVVEF
DIIEVNYI
>gid:852944  HI1364  transcriptional regulator, putative
MDKLNAISIFCKVIETQSFTLAAKQQNISVAMASKLVSQLEEHLKTRLLQ
RTTRKIMPTEAGMMYYQRCQGILLDLDEADSSITQLTSSLQGNLLISVPR
DFGLLFIAPNLPTFMAKHPHLHIEVEFNDKKIDLLSEGYDLALRIGYMED
SSLVSRKIGTTTVHFAASPNYLETNGIPQTPDDLEHHNGLLYKNAMNQVN
WVGSRINQTQRFKIQSKVVSNSGFALLNMAKAGLGIANLPKFILGRAFEK
GELIEILPEYKQQKLEIHVVYPNRRHLPIKVTGISLNF
>gid:852960  HI1379  phosphate regulon transcriptional regulatory protein (phoB)
MTRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPKLIL
LDWMLPGRSGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADD
YITKPFSPQILLARIEAVWRRIYEQQSQFIQIDELSIDENAQRVFFQQQE
INLSSTEFKLLHFFMRHPEKVYSREQLLNRIWHNDLEVEYRTVDSYIRRL
RRNLAPFQCEHYIQTVRGSGYRFSSYLRDKQ
>gid:852989  HI1406  H. influenzae predicted coding region HI1406
MKRNWDLIRSILLKLESQSEARGSLLPDGFTGFDSETVSYHFKLLQSAGL
IEAIDYSSLNEMSLIARLLTWQGHELLDKIRNDTVWNSLKTTIKSKSLDL
SLDAIKQVAQTIISQMLA
>gid:852999  HI1418  H. influenzae predicted coding region HI1418
MGKLSILSKRKYTMKNQIQFSTFNFKDLPVRVILDPKGEFWFCGTDVCHI
LGYTNSRKALQDHCKQGGVTKRYTPTKSADQEMTFINEPNLYRLIIKSRK
PEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPEKKFSFEFTEYELQ
QLVWLWFAFMRGIVTFQHIEKAFKALGSNMSGDIYGQAYEYLSVYAQQTK
S
>gid:853001  HI1420  H. influenzae predicted coding region HI1420
MTEQLKDFDVAEHLTSEEEIQLYLNEILQEDNIELILSALGDIARARNMS
QIARDAGISREGLYKALSGTGNPTFATVMKVMKALNLQFQVQQSRFA
>gid:853003  HI1422  H. influenzae predicted coding region HI1422
MTHLNLIPVFNGLIQNQPVQLCNARELHAFVESKQQYTDWIKNRINEYGF
IQDEDYLVITERTNGRPRKEYHITLDMGKELGMVERNERGRQIRQYFIRC
ERTLKALQQPQQLALPEPEKFTHEFTEFEIETLVWLLIGHHQMNTLLGQL
EKPLDAIGSNLHPAVYSYWKEYGRQYKDALPTIKRLMAPFK
>gid:853016  HI1434.1  cold shock-like protein (cspD)
MEIGIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQF
EVLHSDKGSHATKIIPIADTQE
>gid:853043  HI1459  sigma factor, putative
MSFISYISFKGIKMNVISDLELQQIRTQMLTFAQLQVNQADLAEDLVQEA
FLSAFKNLANFKRQSAFKTWIFAILKNKIIDYLRQKGRFVLESELEDENT
NNSFFDEKGHWKPEYHPSELQGEEETVYSDEFWLIFETCLNCLPAKQAKI
FMMREFLELSSEEICQETHLTSSNLHTTLYRARLQLQNCLSKKL
>gid:853061  HI1476  transcriptional regulatory protein
MQYQNQDNFPERIEYLVDKLNGPSEFARKTGVTLSTITRWRKGEADPSRS
NLVKIAEVTGVSIEWLATGKIKEEKTTEEKPAGSLVSRAFERMQAMLEEG
VSMIDSYSSINVSAGFGSFNEGITQPDGQEPYSDELLTSLGVKADNCAVF
WANGNSMLPTINNYDQMLVDLSRKEIQGDRIYLVQNGESVWVKRVKMEWD
GISLISDNKEEYPPISITGENAQNLQIIGQVVHIGHSLI
>gid:853062  HI1477  DNA-binding protein (ner)
MSVLEKPKKTAEQDWHRADILAELKKNGWSLRSLAKEGQVSYNTLKTVLD
KSYPKMERLVANAIGVPPEVIWAGRFAERNKRPTLQHKY
>gid:853065  HI1480  H. influenzae predicted coding region HI1480
MSETDLLLKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEEN
WHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRH
LQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVS
FEYWHA
>gid:853132  HI1546  impA protein, putative
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCF
IHITNPNMLAWGIESGDMLVVEKNDDLYSGDLVVLEENNEFHVYEFMAHS
GNYLFMALDSTTQNINTKRLVKFTYYRHRDQYDSSNETSR
>gid:853181  HI1596  leucine responsive regulatory protein (lrp)
MSKEIKKMEKKRNKALDAIDIKILNELQRNGKISNIDLSKKVGLSPTPCL
ERVKRLEKQGVIMGYRALLNPELLDAPLLVIVEITLVRGKPDVFEEFNAA
IQALEEIQECHLVSGDFDYLLKTRVADMAEYRKLLGTTLLRLPGVNDTRT
YVVMEEVKQTNFLVLK
>gid:853208  HI1623  mercuric resistance operon regulatory protein (merR2)
MKIGALAKALGCTVETIRYYEQQGLIPPPKRTSGNFRQYNEEHLQRLSFI
CNCRNLDISLSEIKSLLNLENASKQQAEEINRVLDKHIKEVATRIHELAH
LRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK
>gid:853219  HI1635  purine nucleotide synthesis repressor (purR)
MATIKDVAKMAGVSTTTVSHVINKTRFVAKDTEEAVLSAIKQLNYSPSAV
ARSLKVNTTKSIGMIVTTSEAPYFAEIIHSVEEHCYRQGYSLFCVTHKMD
PEKVKNHLEMLAKKRVDGLLVMCSEYTQDSLDLLSSFSTIPMVVMDWGPN
ANTDVIDDHSFDGGYLATKHLIECGHKKIGIICGELNKTTARTRYEGFEK
AMEEAKLTINPSWVLEGAFEPEDGYECMNRLLTQEKLPTALFCCNDVMAL
GAISALTEKGLRVPEDMSIIGYDDIHASRFYAPPLTTIHQSKLRLGRQAI
NILLERITHKDEGVQQYSRIDITPELIIRKSVKSIL
>gid:853292  HI1708  transcriptional regulatory protein (ygiX)
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVL
DLTLPKLDGLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLC
KPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISL
TSREYKLLELFMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQK
LGKQFIRTVHGVGYALGQVEK
>gid:853317  HI1733  exoribonuclease II (rnb)
MFQDNPLLAQLKQQIHDSKEQVEGVVKSTDKAYGFLECDKKTYFIAPPSM
KKVMHGDKIKATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDKKLQVL
VDHPSINQPIGAQQAKSVKEELQEGDWVVANLKTHPLRDDRFFYATINQL
ICRADDELAPWWVTLARHEQSRYPVRGAEPYEMLDQKTRENLTALHFVTI
DSESTMDMDDALYIEPIAQNSTQTGWKLVVAIADPTAYIALDSQIEQEAK
QRCFTNYLPGFNIPMLPRELSDELCSLIANETRPALVCYIETDLTGNITA
KPHFVSAYVQSKAKLAYNKVSDYLEQADNAWQPEMPETAQQIHWLHQFTK
ARIQWRKTHSLFFKEKPDYAFVLAENGKVQEIKAEYRRIANQIVEEAMII
ANICAAQFLHEQAKTGIFNTHSGFDKKFLENAHNFLMANLANEQNQTELA
ERYSVENLATLNGYCQMRHDIEPIESDYLELRLRRYLTFAEFKSELAPHF
GLGLEGYATWTSPIRKYSDMVNHRLIKAVLAKQPYEKPQNDVLARLQEAR
RQNRLVERDIADWLYCRYLADKVASNAEFEAEVQDVMRAGLRVQLLENGA
SLFIPAATLHNNKEEIQLNPDELALYIKGERTYKIGDMVKVKLTEVKEAT
RSIVGEILQ
>gid:853323  HI1739  transcriptional activator (metR)
MKPTFLEFRHLKTLLALKETGSVSLAAKRVYLTQSALSHQIKLIEEQFGL
PLFERKSNPLRFTSAGERLIRLANEVMPKVIDAERDLARVKHGDAGQLRI
AVECHTCFDWLMPAMDEFRQHWGLVELDIVSGFHTDPVGLLLSHRADWAI
VSEIEHNDDVIFKPLFSYEMVGICSKNHSLAEKDIWEAEDFIDETWVTYP
VPDDMLDLWRKVLKSKGINPTRRTTELTIAMIQLVASRRGIATIPYWAAL
PYLEKGYVVARKVTKEGLYSNLYAAIRKEDESLSYLEDFYQTVKSQSFST
LPGLSVLNL
>gid:853329  HI1740  ATP-dependent DNA helicase (recG)
MSLELLDAVPLTSLSGVGAAISNKLAKIGIHNLQDLLFHLPIRYEDRTRI
TLIANLRPEQYFTIEGIVQTCEVAFGRRPILSVSLSDGTSKIMLRFFNFN
AGMRNSFQVGVRVKAFGEVKRGRHMPEIHHPEYQIVRDNAPIVLEETLTP
IYSTTEGLKQNSLRKLTDQALALLDKVQIAEILPNEFNPHQYSLKEALRL
LHRPPPDISLEMLEQGKHPAQQRLIFEELLAHNLAMQKVRLGTQQFSALP
LHYQTDLKQRFLATLPFQPTNAQKRVVSDIEQDLIKDYPMMRLVQGDVGS
GKTLVAALAALTAIDNGKQVALMAPTEILAEQHANNFRRWFKPFGIEVGW
LAGKVKGKSRQAELEKIKTGAVQMVVGTHALFQEEVEFSDLALVIIDEQH
RFGVHQRLMLREKGEKAGFYPHQLIMTATPIPRTLAMTVYADLDTSIIDE
LPPGRTPITTVVVSEERRAEIVMRVKNACVNEKRQAYWVCTLIDESEVLE
AQAAEAIWEDLTKALPMLNIGLVHGRMKPQEKQDVMMRFKNAELDLLVAT
TVIEVGVDVPNASLMIIENAERLGLSQLHQLRGRVGRGCTASFCVLMYKP
PLGKVSQKRLQVLRDSQDGFVISEKDLEIRGPGEVLGTKQTGIAELRVAN
LMRDRKMIPTVQHYAKSLIQKYPDVAESLIRRWLNNKEIYSNA
>gid:853330  HI1741  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (spoT)
MIARDAHEGQFRSSGEPYITHPVAVASIIAQLHLDHEAVMAALLHDVIED
TPYTEEQLKEEFGASVAEIVDGVSKLDKLKFRTRQEAQVENFRKMILAMT
RDIRVVLIKLADRTHNMRTLGSLRPDKRRRIAKETLEIYCPLAHRLGIEH
IKNELEDLSFQAMHPHRYEVLKKLVDVARSNRQDLIERISQEIKVRLENS
GIFARVWGREKHLYKIYQKMRIKDQEFHSIMDIYAFRVIVKNVDDCYRVL
GQMHNLYKPRPGRVKDYIAVPKANGYQSLQTSMIGPKGVPVEVHIHTEDM
EQVAEMGITAHWVYKENGKNDSTTAQIRVQRWLQSLVEIQQSVGNSFEFI
ENVKSEFFPKEIYVFTPKGRIVELPMGATAVDFAYAVHSDVGNTCVGVTV
EHKPYPLSKALESGQTVNIITDPNAHPEVAWLNFVVTARAKTRIRHYLKQ
RCEEDAVKLGEVELNVALQPHNLGDFSIQQIRTVLDALALSSLDELLREI
GLGNQSASMIAHQFVGVPLESANTKNLEFESKILTIAPMQVGKTQFAQCC
HPILGDPIVGCCTEKNTVVVHHQHCASLKNACRQSLAKWDNVQSAVNFEA
ELQIEILNEQNALLSLMTAISASESSLQNIWTEELENNLLLVILQVCVKD
IKHLANIVHRIKGITGVVNVKRNINEL
>gid:853331  HI1742  DNA-directed RNA polymerase, omega chain (rpoZ)
MARVTVQDAVEKIGNRFDLILTAARRARQLQLNQSAPLVPEDNDKPTVIA
LREIEKGLINQDIMDAQEFQKMAKVQETEEAAVALITE