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2024-05-19 09:33:40

Gene list

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COG category: Transcription
Organism: Haemophilus influenzae Rd KW20

Number of genes found: 90

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Haemophilus influenzae Rd KW20
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HI0014 ribonuclease III (rnc)RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS14328 684 - 0.416667
HI0054 uxu operon regulator (uxuR)RecName: Full=Uxu operon regulator; chromosome CDS54779 801 + 0.309613
HI0093 conserved hypothetical proteinRecName: Full=Uncharacterized protein HI_0093; chromosome CDS100475 1107 - 0.374887
HI0143 conserved hypothetical proteinRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0143; chromosome CDS158715 867 - 0.376009
HI0144 glucose kinase, putativeRecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; chromosome CDS159574 903 - 0.404208
HI0182 sugar kinase, putativeRecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; chromosome CDS195888 942 + 0.401274
HI0186 transcriptional regulator, putativeRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0186; chromosome CDS200733 408 + 0.379902
HI0224 transcriptional regulator, putativeRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0224; chromosome CDS253727 507 + 0.357002
HI0231 ATP-dependent RNA helicase (deaD)RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS261572 1842 + 0.419653
HI0260.1 H. influenzae predicted coding region HI0260.1RecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; chromosome CDS290110 726 - 0.381543
HI0269 RNA polymerase sigma-32 factor (rpoH)RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS302991 846 + 0.405437
HI0293 transcriptional regulator, merR family, putativeRecName: Full=Probable heavy metal-dependent transcriptional regulator HI_0293; chromosome CDS328070 387 + 0.369509
HI0294 met repressor (metJ)RecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; chromosome CDS328470 318 - 0.399371
HI0295 transcription termination factor (rho)RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS329034 1263 + 0.402217
HI0304 conserved hypothetical proteinRecName: Full=UPF0301 protein HI_0304; chromosome CDS338634 561 + 0.388592
HI0334 GTP pyrophosphokinase (relA)RecName: Full=GTP pyrophosphokinase; EC=2.7.6.5; AltName: Full=(p)ppGpp synthase; AltName: Full=ATP:GTP 3-pyrophosphotransferase; AltName: Full=ppGpp synthase I; chromosome CDS361233 2232 + 0.407258
HI0358 transcriptional activator, putativeRecName: Full=Uncharacterized protein HI_0358; chromosome CDS383075 648 + 0.422839
HI0379 conserved hypothetical proteinRecName: Full=Putative HTH-type transcriptional regulator HI_0379; chromosome CDS400455 453 - 0.357616
HI0387 ATP-dependent helicase (dinG)RecName: Full=Probable ATP-dependent helicase HI_0387; EC=3.6.4.12; chromosome CDS407000 1923 + 0.367655
HI0410 transcriptional regulatory protein (tyrR)RecName: Full=Transcriptional regulatory protein TyrR; chromosome CDS431377 957 + 0.375131
HI0422 ATP-dependent RNA helicase (srmB)RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS444029 1320 - 0.415909
HI0426 fatty acid metabolism regulator protein (fadR)RecName: Full=Fatty acid metabolism regulator protein; chromosome CDS448763 726 - 0.355372
HI0451 conserved hypothetical proteinRecName: Full=Uncharacterized protein HI_0451; chromosome CDS473358 192 - 0.416667
HI0506 rbs repressor (rbsR)RecName: Full=Ribose operon repressor; chromosome CDS522876 999 + 0.409409
HI0514 DNA-directed RNA polymerase, beta' chain (rpoC)RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS530561 4248 - 0.413371
HI0515 DNA-directed RNA polymerase, beta chain (rpoB)RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS535050 4032 - 0.397569
HI0533 RNA polymerase sigma-70 factor (rpoD)RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS556243 1890 + 0.37672
HI0536 urease accessory protein (ureG)RecName: Full=Urease accessory protein UreG; chromosome CDS560901 678 - 0.442478
HI0563 transcriptional regulatory protein (asnC)RecName: Full=Regulatory protein AsnC; chromosome CDS582372 453 - 0.337748
HI0568 transcription accessory protein (tex)RecName: Full=Uncharacterized protein HI_0568; chromosome CDS588147 2289 - 0.418523
HI0569 transcription elongation factor (greB)RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; chromosome CDS590531 477 + 0.412998
HI0570 conserved hypothetical proteinRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0570; chromosome CDS591078 618 - 0.409385
HI0571 hydrogen peroxide-inducible genes activator (oxyR)RecName: Full=Hydrogen peroxide-inducible genes activator; chromosome CDS591695 906 - 0.40287
HI0601 DNA transformation protein (tfoX)RecName: Full=DNA transformation protein TfoX; AltName: Full=Competence activator; AltName: Full=Protein Sxy; chromosome CDS622876 654 + 0.314985
HI0615 L-fucose operon activator (fucR)RecName: Full=L-fucose operon activator; chromosome CDS647375 750 - 0.334667
HI0616 ATP-dependent helicase (hepA)RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS648322 2772 + 0.409091
HI0619 glycerol-3-phosphate regulon repressor (glpR)RecName: Full=Glycerol-3-phosphate regulon repressor; chromosome CDS652390 768 + 0.397135
HI0628 RNA polymerase sigma-E factor (rpoE)RecName: Full=ECF RNA polymerase sigma-E factor; AltName: Full=RNA polymerase sigma-E factor; AltName: Full=Sigma-24; chromosome CDS667825 570 + 0.385965
HI0659 H. influenzae predicted coding region HI0659RecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0659; chromosome CDS702730 297 - 0.377104
HI0666.1 H. influenzae predicted coding region HI0666.1RecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0666.1; chromosome CDS711981 309 - 0.372168
HI0677 H. influenzae predicted coding region HI0677RecName: Full=Uncharacterized protein HI_0677; chromosome CDS719657 441 - 0.371882
HI0681 transcriptional activator (ilvY)RecName: Full=HTH-type transcriptional activator IlvY; chromosome CDS722364 879 - 0.407281
HI0717 transcription antitermination protein (nusG)RecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS765444 558 + 0.370968
HI0726 nitrate/nitrite response regulator protein (narP)RecName: Full=Nitrate/nitrite response regulator protein homolog; chromosome CDS777975 627 - 0.366826
HI0749 lexA repressor (lexA)RecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS810075 630 + 0.379365
HI0775 transcriptional regulatorRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0775; chromosome CDS837567 948 + 0.324895
HI0802 DNA-directed RNA polymerase, alpha chain (rpoA)RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS852082 987 + 0.39311
HI0821 galactose operon repressor (galR)RecName: Full=HTH-type transcriptional regulator GalR; AltName: Full=Galactose operon repressor; chromosome CDS872402 999 + 0.384384
HI0830 trp operon repressor (trpR)RecName: Full=Trp operon repressor homolog; chromosome CDS881208 306 + 0.359477
HI0837 response regulator (cpxR)RecName: Full=Transcriptional regulatory protein CpxR homolog; chromosome CDS887135 684 - 0.345029
HI0861 virulence-associated protein (vacB)RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; AltName: Full=VacB protein homolog; chromosome CDS910379 2349 - 0.405705
HI0884 aerobic respiration control protein ARCA (arcA)RecName: Full=Aerobic respiration control protein ArcA homolog; chromosome CDS936511 711 - 0.360056
HI0892 ATP-dependent RNA helicase (rhlB)RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS945227 1257 + 0.409706
HI0893 transcriptional repressor (Bm3R1)RecName: Full=Uncharacterized HTH-type transcriptional regulator HI_0893; chromosome CDS946725 564 + 0.335106
HI0943 conserved hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS1002915 450 + 0.362222
HI0955 transcriptional regulator (ttk)RecName: Full=Nucleoid occlusion factor SlmA; chromosome CDS1013845 657 + 0.388128
HI0980 Hin recombinational enhancer binding protein (fis)RecName: Full=DNA-binding protein Fis; chromosome CDS1038094 300 + 0.37
HI1009 glycerol-3-phosphate regulon repressor (glpR)RecName: Full=Uncharacterized HTH-type transcriptional regulator HI_1009; chromosome CDS1073504 771 - 0.347601
HI1032 transcriptional regulator, putativeRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_1032; chromosome CDS1097216 807 + 0.324659
HI1052 transcriptional regulator, araC family, putativeRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_1052; chromosome CDS1117575 897 - 0.350056
HI1082 conserved hypothetical proteinRecName: Full=Uncharacterized protein HI_1082; chromosome CDS1149047 258 - 0.341085
HI1106 xylose operon regluatory protein (xylR)RecName: Full=Xylose operon regulatory protein; chromosome CDS1169854 1164 - 0.349656
HI1194 glycine cleavage system transcriptional activator (gcvA)RecName: Full=Glycine cleavage system transcriptional activator homolog; chromosome CDS1260096 906 + 0.345475
HI1200 cys regulon transcriptional activator (cysB)RecName: Full=HTH-type transcriptional regulator CysB; AltName: Full=Cys regulon transcriptional activator; chromosome CDS1266047 972 + 0.391975
HI1209 arginine repressor (argR)RecName: Full=Arginine repressor; chromosome CDS1275848 456 - 0.361842
HI1258 transcription-repair coupling factor (mfd)RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1332180 3441 + 0.401918
HI1283 N utilization substance protein A (nusA)RecName: Full=Transcription termination/antitermination protein NusA; chromosome CDS1359128 1488 + 0.389785
HI1304 N utilization substance protein B (nusB)RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS1383688 435 + 0.383908
HI1331 transcription elongation factor (greA)RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1409061 477 + 0.366876
HI1364 transcriptional regulator, putativeRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_1364; AltName: Full=ORF2; chromosome CDS1449976 867 - 0.342561
HI1379 phosphate regulon transcriptional regulatory protein (phoB)RecName: Full=Phosphate regulon transcriptional regulatory protein PhoB; chromosome CDS1475625 696 - 0.337644
HI1406 H. influenzae predicted coding region HI1406RecName: Full=Uncharacterized protein HI_1406; chromosome CDS1501283 357 - 0.366947
HI1418 H. influenzae predicted coding region HI1418RecName: Full=Uncharacterized protein HI_1418; chromosome CDS1509035 606 - 0.391089
HI1420 H. influenzae predicted coding region HI1420RecName: Full=Uncharacterized protein HI_1420; chromosome CDS1510258 294 + 0.394558
HI1422 H. influenzae predicted coding region HI1422RecName: Full=Uncharacterized protein HI_1422; chromosome CDS1511013 576 + 0.449653
HI1434.1 cold shock-like protein (cspD)RecName: Full=Cold shock-like protein CspD; chromosome CDS1522993 219 - 0.365297
HI1459 sigma factor, putativeRecName: Full=Probable RNA polymerase sigma factor HI_1459; chromosome CDS1542231 585 - 0.324786
HI1476 transcriptional regulatory proteinRecName: Full=Uncharacterized HTH-type transcriptional regulator HI_1476; chromosome CDS1559962 720 - 0.430556
HI1477 DNA-binding protein (ner)RecName: Full=Mu-like prophage FluMu DNA-binding protein Ner; chromosome CDS1560909 270 + 0.396296
HI1480 H. influenzae predicted coding region HI1480RecName: Full=Uncharacterized protein HI_1480; chromosome CDS1563537 471 - 0.392781
HI1546 impA protein, putativeRecName: Full=Uncharacterized protein HI_1546; chromosome CDS1617353 423 + 0.323877
HI1596 leucine responsive regulatory protein (lrp)RecName: Full=Leucine-responsive regulatory protein; chromosome CDS1663262 501 - 0.365269
HI1623 mercuric resistance operon regulatory protein (merR2)RecName: Full=HTH-type transcriptional regulator ZntR homolog; chromosome CDS1689316 408 + 0.355392
HI1635 purine nucleotide synthesis repressor (purR)RecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; chromosome CDS1697612 1011 + 0.388724
HI1708 transcriptional regulatory protein (ygiX)RecName: Full=Transcriptional regulatory protein QseB; chromosome CDS1781742 666 - 0.387387
HI1733 exoribonuclease II (rnb)RecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; chromosome CDS1809215 1980 - 0.429798
HI1739 transcriptional activator (metR)RecName: Full=HTH-type transcriptional regulator MetR; chromosome CDS1815309 930 - 0.388172
HI1740 ATP-dependent DNA helicase (recG)RecName: Full=ATP-dependent DNA helicase RecG; EC=3.6.4.12; chromosome CDS1824562 2082 - 0.417867
HI1741 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (spoT)RecName: Full=Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; AltName: Full=Penta-phosphate guanosine-3-pyrophosphohydrolase; Short=(ppGpp)ase; chromosome CDS1826640 2034 - 0.402163
HI1742 DNA-directed RNA polymerase, omega chain (rpoZ)RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1828934 267 - 0.363296