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2024-05-06 08:00:50

Gene list

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COG category: Transcription
Organism: Haemophilus influenzae Rd KW20

Number of genes found: 90

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Haemophilus influenzae Rd KW20
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
HI0014 ribonuclease III (rnc)chromosome CDS14328 684 - 0.416667
HI0054 uxu operon regulator (uxuR)chromosome CDS54779 801 + 0.309613
HI0093 conserved hypothetical proteinchromosome CDS100475 1107 - 0.374887
HI0143 conserved hypothetical proteinchromosome CDS158715 867 - 0.376009
HI0144 glucose kinase, putativechromosome CDS159574 903 - 0.404208
HI0182 sugar kinase, putativechromosome CDS195888 942 + 0.401274
HI0186 transcriptional regulator, putativechromosome CDS200733 408 + 0.379902
HI0224 transcriptional regulator, putativechromosome CDS253727 507 + 0.357002
HI0231 ATP-dependent RNA helicase (deaD)chromosome CDS261572 1842 + 0.419653
HI0260.1 H. influenzae predicted coding region HI0260.1chromosome CDS290110 726 - 0.381543
HI0269 RNA polymerase sigma-32 factor (rpoH)chromosome CDS302991 846 + 0.405437
HI0293 transcriptional regulator, merR family, putativechromosome CDS328070 387 + 0.369509
HI0294 met repressor (metJ)chromosome CDS328470 318 - 0.399371
HI0295 transcription termination factor (rho)chromosome CDS329034 1263 + 0.402217
HI0304 conserved hypothetical proteinchromosome CDS338634 561 + 0.388592
HI0334 GTP pyrophosphokinase (relA)chromosome CDS361233 2232 + 0.407258
HI0358 transcriptional activator, putativechromosome CDS383075 648 + 0.422839
HI0379 conserved hypothetical proteinchromosome CDS400455 453 - 0.357616
HI0387 ATP-dependent helicase (dinG)chromosome CDS407000 1923 + 0.367655
HI0410 transcriptional regulatory protein (tyrR)chromosome CDS431377 957 + 0.375131
HI0422 ATP-dependent RNA helicase (srmB)chromosome CDS444029 1320 - 0.415909
HI0426 fatty acid metabolism regulator protein (fadR)chromosome CDS448763 726 - 0.355372
HI0451 conserved hypothetical proteinchromosome CDS473358 192 - 0.416667
HI0506 rbs repressor (rbsR)chromosome CDS522876 999 + 0.409409
HI0514 DNA-directed RNA polymerase, beta' chain (rpoC)chromosome CDS530561 4248 - 0.413371
HI0515 DNA-directed RNA polymerase, beta chain (rpoB)chromosome CDS535050 4032 - 0.397569
HI0533 RNA polymerase sigma-70 factor (rpoD)chromosome CDS556243 1890 + 0.37672
HI0536 urease accessory protein (ureG)chromosome CDS560901 678 - 0.442478
HI0563 transcriptional regulatory protein (asnC)chromosome CDS582372 453 - 0.337748
HI0568 transcription accessory protein (tex)chromosome CDS588147 2289 - 0.418523
HI0569 transcription elongation factor (greB)chromosome CDS590531 477 + 0.412998
HI0570 conserved hypothetical proteinchromosome CDS591078 618 - 0.409385
HI0571 hydrogen peroxide-inducible genes activator (oxyR)chromosome CDS591695 906 - 0.40287
HI0601 DNA transformation protein (tfoX)chromosome CDS622876 654 + 0.314985
HI0615 L-fucose operon activator (fucR)chromosome CDS647375 750 - 0.334667
HI0616 ATP-dependent helicase (hepA)chromosome CDS648322 2772 + 0.409091
HI0619 glycerol-3-phosphate regulon repressor (glpR)chromosome CDS652390 768 + 0.397135
HI0628 RNA polymerase sigma-E factor (rpoE)chromosome CDS667825 570 + 0.385965
HI0659 H. influenzae predicted coding region HI0659chromosome CDS702730 297 - 0.377104
HI0666.1 H. influenzae predicted coding region HI0666.1chromosome CDS711981 309 - 0.372168
HI0677 H. influenzae predicted coding region HI0677chromosome CDS719657 441 - 0.371882
HI0681 transcriptional activator (ilvY)chromosome CDS722364 879 - 0.407281
HI0717 transcription antitermination protein (nusG)chromosome CDS765444 558 + 0.370968
HI0726 nitrate/nitrite response regulator protein (narP)chromosome CDS777975 627 - 0.366826
HI0749 lexA repressor (lexA)chromosome CDS810075 630 + 0.379365
HI0775 transcriptional regulatorchromosome CDS837567 948 + 0.324895
HI0802 DNA-directed RNA polymerase, alpha chain (rpoA)chromosome CDS852082 987 + 0.39311
HI0821 galactose operon repressor (galR)chromosome CDS872402 999 + 0.384384
HI0830 trp operon repressor (trpR)chromosome CDS881208 306 + 0.359477
HI0837 response regulator (cpxR)chromosome CDS887135 684 - 0.345029
HI0861 virulence-associated protein (vacB)chromosome CDS910379 2349 - 0.405705
HI0884 aerobic respiration control protein ARCA (arcA)chromosome CDS936511 711 - 0.360056
HI0892 ATP-dependent RNA helicase (rhlB)chromosome CDS945227 1257 + 0.409706
HI0893 transcriptional repressor (Bm3R1)chromosome CDS946725 564 + 0.335106
HI0943 conserved hypothetical proteinchromosome CDS1002915 450 + 0.362222
HI0955 transcriptional regulator (ttk)chromosome CDS1013845 657 + 0.388128
HI0980 Hin recombinational enhancer binding protein (fis)chromosome CDS1038094 300 + 0.37
HI1009 glycerol-3-phosphate regulon repressor (glpR)chromosome CDS1073504 771 - 0.347601
HI1032 transcriptional regulator, putativechromosome CDS1097216 807 + 0.324659
HI1052 transcriptional regulator, araC family, putativechromosome CDS1117575 897 - 0.350056
HI1082 conserved hypothetical proteinchromosome CDS1149047 258 - 0.341085
HI1106 xylose operon regluatory protein (xylR)chromosome CDS1169854 1164 - 0.349656
HI1194 glycine cleavage system transcriptional activator (gcvA)chromosome CDS1260096 906 + 0.345475
HI1200 cys regulon transcriptional activator (cysB)chromosome CDS1266047 972 + 0.391975
HI1209 arginine repressor (argR)chromosome CDS1275848 456 - 0.361842
HI1258 transcription-repair coupling factor (mfd)chromosome CDS1332180 3441 + 0.401918
HI1283 N utilization substance protein A (nusA)chromosome CDS1359128 1488 + 0.389785
HI1304 N utilization substance protein B (nusB)chromosome CDS1383688 435 + 0.383908
HI1331 transcription elongation factor (greA)chromosome CDS1409061 477 + 0.366876
HI1364 transcriptional regulator, putativechromosome CDS1449976 867 - 0.342561
HI1379 phosphate regulon transcriptional regulatory protein (phoB)chromosome CDS1475625 696 - 0.337644
HI1406 H. influenzae predicted coding region HI1406chromosome CDS1501283 357 - 0.366947
HI1418 H. influenzae predicted coding region HI1418chromosome CDS1509035 606 - 0.391089
HI1420 H. influenzae predicted coding region HI1420chromosome CDS1510258 294 + 0.394558
HI1422 H. influenzae predicted coding region HI1422chromosome CDS1511013 576 + 0.449653
HI1434.1 cold shock-like protein (cspD)chromosome CDS1522993 219 - 0.365297
HI1459 sigma factor, putativechromosome CDS1542231 585 - 0.324786
HI1476 transcriptional regulatory proteinchromosome CDS1559962 720 - 0.430556
HI1477 DNA-binding protein (ner)chromosome CDS1560909 270 + 0.396296
HI1480 H. influenzae predicted coding region HI1480chromosome CDS1563537 471 - 0.392781
HI1546 impA protein, putativechromosome CDS1617353 423 + 0.323877
HI1596 leucine responsive regulatory protein (lrp)chromosome CDS1663262 501 - 0.365269
HI1623 mercuric resistance operon regulatory protein (merR2)chromosome CDS1689316 408 + 0.355392
HI1635 purine nucleotide synthesis repressor (purR)chromosome CDS1697612 1011 + 0.388724
HI1708 transcriptional regulatory protein (ygiX)chromosome CDS1781742 666 - 0.387387
HI1733 exoribonuclease II (rnb)chromosome CDS1809215 1980 - 0.429798
HI1739 transcriptional activator (metR)chromosome CDS1815309 930 - 0.388172
HI1740 ATP-dependent DNA helicase (recG)chromosome CDS1824562 2082 - 0.417867
HI1741 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (spoT)chromosome CDS1826640 2034 - 0.402163
HI1742 DNA-directed RNA polymerase, omega chain (rpoZ)chromosome CDS1828934 267 - 0.363296