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2024-05-05 06:26:31

Gene list

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COG category: Transcription
Organism: Lactococcus lactis subsp. lactis Il1403, IL1403

Number of genes found: 184

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactococcus lactis subsp. lactis Il1403, IL1403
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
ahrC transcriptional regulatorchromosome CDS882501 447 + 0.333333
argR arginine catabolic regulatorchromosome CDS2117603 459 + 0.328976
bglR beta-glucoside operon antiterminatorchromosome CDS1492982 810 - 0.303704
birA1 bifunctional protein BirA (EC 6.3.4.15)chromosome CDS1839700 972 - 0.341564
busR GntR family transcriptional regulatorchromosome CDS1475885 621 - 0.378422
ccpA catabolite control protein Achromosome CDS1695930 999 - 0.364364
citR citrate lyase regulatorchromosome CDS1205754 930 - 0.397849
codY transcriptional regulatorchromosome CDS164033 789 + 0.391635
codZ transcriptional regulatorchromosome CDS1864771 609 - 0.313629
copR transcriptional regulatorchromosome CDS845106 456 + 0.364035
cspD cold shock protein Dchromosome CDS517114 201 + 0.368159
cspE cold shock protein Echromosome CDS172501 198 - 0.409091
ctsR transctiptional regulator CtsRchromosome CDS629354 456 + 0.381579
dinG ATP-dependent helicase DinGchromosome CDS1898543 2385 - 0.348428
fhuR fhu operon transcriptional regulatorchromosome CDS330450 906 + 0.354305
gadR positive regulatorchromosome CDS1326911 831 - 0.286402
glk glucose kinase (EC 2.7.1.2)chromosome CDS2100698 972 + 0.396091
glnR glutamine synthetase repressorchromosome CDS2283711 369 - 0.422764
gntR transcription regulatorchromosome CDS2271521 849 + 0.366313
greA transcription elongation factor GreAchromosome CDS625972 471 + 0.354565
hrcA heat-inducible transcription repressor HrcAchromosome CDS976778 1044 + 0.346743
kdgR GntR family transcriptional regulatorchromosome CDS1680202 684 + 0.368421
lacR lactose transport regulatorchromosome CDS983589 702 + 0.349003
llrA two-component system regulatorchromosome CDS1638768 693 - 0.380952
llrB two-component system regulatorchromosome CDS1458173 711 + 0.336146
llrC two-component system regulatorchromosome CDS402989 702 - 0.38604
llrD two-component system regulatorchromosome CDS912508 630 + 0.344444
llrE two-component system regulatorchromosome CDS1030421 687 + 0.369723
llrF two-component system regulatorchromosome CDS1726969 678 - 0.311209
llrG two-component system regulatorchromosome CDS1804856 672 - 0.309524
llrH two-component system regulatorchromosome CDS1757804 987 - 0.281662
mfd transcription-repair coupling factorchromosome CDS17165 3486 + 0.355422
mleR malolactic fermentation system transcriptional activatorchromosome CDS895741 876 + 0.299087
mtlR LysR family transcriptional regulatorchromosome CDS30922 1938 + 0.318885
napB HYPOTHETICAL PROTEINchromosome CDS306480 480 - 0.310417
nusA transcription termination protein NusAchromosome CDS773810 1149 + 0.382071
nusB transcription termination protein NusBchromosome CDS692721 972 + 0.331276
nusG transcription antitermination proteinchromosome CDS2173872 558 - 0.367384
parA chromosome partitioning proteinchromosome CDS98429 786 - 0.329517
pi103 prophage pi1 protein 03, transcriptional regulatorchromosome CDS449154 837 - 0.354839
pi127 prophage pi1 protein 27chromosome CDS461360 246 + 0.349593
pi204 prophage pi2 protein 04 HYPOTHETICAL PROTEINchromosome CDS1038925 543 - 0.289134
pi237 prophage pi2 protein 37chromosome CDS1059183 372 + 0.354839
pi355 prophage pi3 protein 55, antirepressorchromosome CDS1452584 711 - 0.350211
pi356 prophage pi3 protein 56, cro-like repressorchromosome CDS1453308 240 - 0.366667
pi357 prophage pi3 protein 57, cI-like repressorchromosome CDS1453713 522 + 0.310345
ps101 prophage ps1 protein 01, hypothetical regulatorchromosome CDS35516 324 - 0.410494
ps111 prophage ps1 protein 11, transcriptional regulatorchromosome CDS41419 252 - 0.297619
ps115 prophage ps1 protein 15, transcriptional regulatorchromosome CDS43689 387 + 0.379845
ps122 prophage ps1 protein 22chromosome CDS47988 306 + 0.336601
ps205 prophage ps2 protein 05, transcriptional repressorchromosome CDS505482 369 - 0.308943
ps305 prophage ps3 protein 05chromosome CDS2015846 507 - 0.301775
ps314 prophage ps3 protein 14, transcriptional regulatorchromosome CDS2023293 207 - 0.26087
ps315 prophage ps3 protein 15chromosome CDS2023648 708 + 0.316384
rarA transcriptional regulatorchromosome CDS1649332 300 + 0.326667
rbsR ribose operon repressorchromosome CDS1687322 984 - 0.353659
rdrA transcriptional regulatorchromosome CDS796549 744 - 0.344086
rdrB transcriptional regulatorchromosome CDS1331842 762 + 0.317585
recG ATP-dependent DNA helicase RecG (EC 3.6.1.-)chromosome CDS2329913 2001 - 0.378811
relA ppGpp synthetase I (EC 2.7.6.5)chromosome CDS107212 2223 + 0.381466
rgrA GntR family transcriptional regulatorchromosome CDS436511 717 - 0.362622
rgrB GntR family transcriptional regulatorchromosome CDS1460974 708 - 0.371469
rheA ATP-dependent RNA helicasechromosome CDS353033 1644 + 0.409367
rheB ATP-dependent RNA helicasechromosome CDS415804 1341 + 0.358688
rliA transcriptional regulatorchromosome CDS1727815 975 - 0.356923
rliB transcriptional regulatorchromosome CDS1535202 1038 + 0.349711
rliC transcriptional regulatorchromosome CDS730327 1041 + 0.321806
rliDA transcriptional regulatorchromosome CDS2214455 411 + 0.36253
rliDB transcriptional regulatorchromosome CDS2217579 534 + 0.342697
rlrA LysR family transcriptional regulatorchromosome CDS1263405 912 + 0.287281
rlrB LysR family transcriptional regulatorchromosome CDS1945945 879 - 0.360637
rlrC LysR family transcriptional regulatorchromosome CDS1340924 822 + 0.316302
rlrD LysR family transcriptional regulatorchromosome CDS380895 822 - 0.317518
rlrG LysR family transcriptional regulatorchromosome CDS377467 819 - 0.327228
rmaA transcriptional regulatorchromosome CDS749729 477 - 0.312369
rmaB transcriptional regulatorchromosome CDS714363 876 + 0.364155
rmaC transcriptional regulatorchromosome CDS1502314 1071 - 0.319328
rmaD transcriptional regulatorchromosome CDS115022 492 - 0.339431
rmaE transcriptional regulatorchromosome CDS1511212 420 - 0.302381
rmaF transcriptional regulatorchromosome CDS1340403 471 + 0.324841
rmaG transcriptional regulatorchromosome CDS780787 441 + 0.356009
rmaH transcriptional regulatorchromosome CDS932070 465 + 0.367742
rmaI transcriptional regulatorchromosome CDS1582257 447 - 0.360179
rmaJ transcriptional regulatorchromosome CDS583404 432 - 0.289352
rmeA transcriptional regulatorchromosome CDS1946839 405 - 0.308642
rmeB transcriptional regulatorchromosome CDS1507815 435 - 0.326437
rmeC transcriptional regulatorchromosome CDS236778 363 + 0.369146
rmeD transcriptional regulatorchromosome CDS2052690 378 + 0.312169
rnc ribonuclease III (EC 3.1.26.3)chromosome CDS809461 696 + 0.373563
rpoA DNA-directed RNA polymerase alpha chain (EC 2.7.7.6)chromosome CDS2152087 939 - 0.382322
rpoB DNA-directed RNA polymerase beta chain (EC 2.7.7.6)chromosome CDS1860915 3591 - 0.412141
rpoC DNA-directed RNA polymerase beta' chain (EC 2.7.7.6)chromosome CDS1857183 3597 - 0.403114
rpoD major RNA polymerase sigma factorchromosome CDS546000 1344 + 0.380952
rpoE DNA-directed RNA polymerase delta chain (EC 2.7.7.6)chromosome CDS623557 564 + 0.365248
scrK fructokinase (EC 2.7.1.4)chromosome CDS1517970 876 - 0.402968
sigX RNA polymerase ECF sigma factorchromosome CDS2242478 495 + 0.323232
snf SWI/SNF family helicasechromosome CDS2120587 3105 - 0.340097
tagR transcriptional regulatorchromosome CDS935545 336 + 0.297619
tenA transcriptional regulator TenAchromosome CDS1838686 657 - 0.356164
vacB1 ribonucleasechromosome CDS967019 2454 + 0.370823
vacB2 ribonucleasechromosome CDS1226204 1998 + 0.350851
xylR xylose operon regulatorchromosome CDS1550477 984 + 0.291667
yabA transcriptional regulatorchromosome CDS10280 558 - 0.351254
yabB transcriptional regulatorchromosome CDS12346 324 + 0.308642
yafE HYPOTHETICAL PROTEINchromosome CDS50180 450 + 0.3
ybaH acetyl transferasechromosome CDS100572 489 - 0.351738
ybdA transcription regulatorchromosome CDS130767 576 + 0.354167
ybdG transcriptional regulatorchromosome CDS135110 321 + 0.330218
ybeD transcriptional regulatorchromosome CDS145304 546 + 0.340659
yccI HYPOTHETICAL PROTEINchromosome CDS227643 426 + 0.361502
ycdF transcriptional regulatorchromosome CDS234472 546 + 0.342491
yceG HYPOTHETICAL PROTEINchromosome CDS245056 564 - 0.276596
ycfA transcriptional regulatorchromosome CDS249968 648 + 0.354938
yciC HYPOTETICAL PROTEINchromosome CDS284496 2139 + 0.368396
ydaF HIPOTHETICAL PROTEINchromosome CDS308509 351 + 0.358974
ydcG transcriptional regulatorchromosome CDS326483 294 + 0.397959
yddC HYPOTHETICAL PROTEINchromosome CDS333567 348 + 0.333333
yebF transcriptional regulatorchromosome CDS417888 747 + 0.34672
yecA transcriptional regulatorchromosome CDS419728 732 + 0.333333
yeeF HYPOTHETICAL PROTEINchromosome CDS444997 519 + 0.352601
yeeG transcriptional regulatorchromosome CDS445619 1386 + 0.373016
yfbM transcriptional regulatorchromosome CDS517855 498 - 0.327309
yfcC HYPOTHETICAL PROTEINchromosome CDS521270 459 + 0.296296
yfeA transcription regulatorchromosome CDS547458 744 + 0.31586
yffB HYPOTHETICAL PROTEINchromosome CDS553073 471 - 0.358811
yfhA HYPOTHETICAL PROTEINchromosome CDS570988 444 + 0.306306
yfiC UNKNOWN PROTEINchromosome CDS582008 534 - 0.303371
yfiL HYPOTHETICAL PROTEINchromosome CDS589332 465 + 0.286022
yfjG transcriptional regulatorchromosome CDS599993 303 + 0.346535
ygaJ UNKNOWN PROTEINchromosome CDS607217 564 + 0.351064
ygfC transcriptional regulatorchromosome CDS653769 570 - 0.303509
yheA HYPOTHETICAL PROTEINchromosome CDS740273 1281 + 0.391881
yhfF HYPOTHETICAL PROTEINchromosome CDS757068 447 + 0.360179
yhgC transcriptional regulatorchromosome CDS762819 813 + 0.312423
yhhG HYPOTHETICAL PROTEINchromosome CDS775124 327 + 0.366972
yidA transcription regulatorchromosome CDS830200 756 + 0.35582
yjaD transcriptional regulatorchromosome CDS903327 534 - 0.322097
yjaH UNKNOWN PROTEINchromosome CDS909021 345 + 0.310145
yjaI UNKNOWN PROTEINchromosome CDS909275 300 + 0.326667
yjeA UNKNOWN PROTEINchromosome CDS939920 1443 + 0.276507
yjfE transcription regulatorchromosome CDS954083 921 + 0.334419
yjjB transcriptional regulatorchromosome CDS991739 558 - 0.295699
ykhI transcriptional regulatorchromosome CDS1077643 858 + 0.299534
ylaG HYPOTHETICAL PROTEINchromosome CDS1109208 489 + 0.361963
yleF transcription regulatorchromosome CDS1147533 852 + 0.350939
ylfC HYPOTHETICAL PROTEINchromosome CDS1152577 528 + 0.375
yliA positive transcriptional regulatorchromosome CDS1180044 861 + 0.344948
yljC transcriptional regulatorchromosome CDS1192577 822 + 0.323601
ymiA metalloregulatorchromosome CDS1285022 654 - 0.325688
ynaB transcriptional regulatorchromosome CDS1302355 759 - 0.334651
ynaG HYPOTHETICAL PROTEINchromosome CDS1308685 498 - 0.341365
yndA UNKNOWN PROTEINchromosome CDS1330278 546 - 0.304029
yneE transcriptional regulatorchromosome CDS1343916 975 + 0.321026
yngB fibronectin-binding proteinchromosome CDS1362894 1623 + 0.341959
yogL transcriptional regulatorchromosome CDS1469252 303 - 0.277228
yogM HYPOTHETICAL PROTEINchromosome CDS1469635 543 - 0.373849
yohC transcriptional regulatorchromosome CDS1471753 567 + 0.335097
ypbG sugar kinasechromosome CDS1518948 882 - 0.362812
ypfD transcriptional regulatorchromosome CDS1554850 627 + 0.341308
ypgC transcription regulatorchromosome CDS1562540 531 + 0.316384
yqbH transcriptional regulatorchromosome CDS1617891 312 - 0.317308
yrbI transcriptional regulatorchromosome CDS1717007 834 - 0.333333
yrfA transcription regulatorchromosome CDS1750127 303 + 0.293729
yrfE transcription regulatorchromosome CDS1758958 1404 - 0.356838
ysgA transcriptional regulatorchromosome CDS1865612 675 + 0.358519
ysiC HYPOTHETICAL PROTEINchromosome CDS1884191 444 + 0.353604
ysiE UNKNOWN PROTEINchromosome CDS1888525 639 - 0.331768
ytgE UNKNOWN PROTEINchromosome CDS1965865 354 - 0.367232
ythA HYPOTHETICAL PROTEINchromosome CDS1973807 465 - 0.376344
ythB HYPOTHETICAL PROTEINchromosome CDS1974300 204 - 0.426471
yucF HYPOTHETICAL PROTEINchromosome CDS2025839 540 + 0.309259
yueB UNKNOWN PROTEINchromosome CDS2044002 1161 - 0.321275
yugA transcription regulatorchromosome CDS2064540 735 - 0.322449
yuiD UNKNOWN PROTEINchromosome CDS2085872 459 - 0.350763
yveC UNKNOWN PROTEINchromosome CDS2143591 495 + 0.365657
yveF HYPOTHETICAL PROTEINchromosome CDS2144821 363 - 0.369146
ywdE transcription regulatorchromosome CDS2236512 858 - 0.297203
yweE HYPOTHETICAL PROTEINchromosome CDS2247500 279 + 0.437276
ywfD UNKNOWN PROTEINchromosome CDS2252730 510 - 0.356863
ywiI transcriptional regulatorchromosome CDS2287402 885 - 0.322034
ywjD transcription regulatorchromosome CDS2296597 309 - 0.349515
yxcB transcriptional regulatorchromosome CDS2325385 615 + 0.339837
yxdD transcriptional regulatorchromosome CDS2337140 474 - 0.331224
zitR zinc transport transcriptional regulatorchromosome CDS2184820 438 - 0.374429