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2024-04-30 08:56:46

Gene list

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COG category: Transcription
Organism: Azoarcus sp. EbN1, EbN1

Number of genes found: 203

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Azoarcus sp. EbN1, EbN1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ebA6850 DNA-binding response regulator, LuxR familychromosome CDS4065554 648 + 0.658951
NA ebA4048 putative transcription regulator protein, IclR familychromosome CDS2386446 792 - 0.683081
NA ebA250 conserved hypothetical proteinchromosome CDS145068 873 + 0.591065
NA ebA3736 putative gntR-family transcriptional regulatorchromosome CDS2198890 672 - 0.645833
NA ebA2840 Transcriptional regulator, Sir2 familychromosome CDS1689024 858 - 0.653846
NA ebA2995 Transcriptional regulator, lysR familychromosome CDS1788760 912 + 0.694079
NA ebA2878 predicted transcriptional regulatorchromosome CDS1715633 462 - 0.614719
NA ebA2 putative bacteriophage-related transcriptional repressorchromosome CDS487 690 + 0.618841
NA ebA1969 transcriptional regulator, TetR familychromosome CDS1158450 615 - 0.676423
NA ebA2689 DNA-binding proteinchromosome CDS1597323 288 - 0.663194
NA ebB24 putative MerR-family transcriptional regulatorchromosome CDS504247 384 - 0.606771
NA ebA1169 putative two-component system,regulatory proteinchromosome CDS680175 762 - 0.695538
NA ebA4627 probable transcription regulator proteinchromosome CDS2735483 1857 + 0.727517
NA c1A29 Protein kinasechromosome CDS1374969 819 + 0.647131
NA ebA2024 Two component response regulatorchromosome CDS1194617 681 - 0.668135
NA ebA2047 Transcriptional regulator, GntR familychromosome CDS1203621 690 + 0.678261
NA ebA4336 hypothetical proteinchromosome CDS2566326 444 - 0.635135
NA ebA7092 hypothetical protein, predicted transcription regulatorchromosome CDS4186811 408 - 0.629902
NA ebA3757 DNA-binding response regulatorchromosome CDS2214090 726 - 0.680441
NA ebA1044 predicted transcriptional regulator,consists of a Zn-ribbon and ATP-cone domainschromosome CDS611476 516 + 0.616279
NA ebA2903 conserved hypothetical proteinchromosome CDS1728845 423 - 0.650118
NA p1B369 hypothetical protein containing helix-turn-helix domain1 CDS201230 2478 - 0.598063
NA ebA2237 probable regulatory proteinchromosome CDS1309533 1029 - 0.599611
NA ebA168 Protein containing response regulator domain, but no DNA binding domainchromosome CDS99736 372 - 0.602151
NA ebA5719 Two-component system response regulatorchromosome CDS3390441 633 + 0.631912
NA ebD35 hypothetical protein, potentially DNA-bindingchromosome CDS884410 270 - 0.637037
NA ebA2026 putative regulatory protein, LuxRchromosome CDS1195597 2688 - 0.704613
NA ebD61 putative transcriptional regulator,possibly phage-relatedchromosome CDS1488272 213 - 0.633803
NA ebA5752 Two-component response regulatorchromosome CDS3414037 636 - 0.570755
NA ebB68 conserved hypothetical proteinchromosome CDS1386768 294 + 0.615646
NA c2A175 Transcriptional regulatorchromosome CDS1097278 858 + 0.675991
NA ebA3954 hypothetical protein, putative transcription regulator with helix-turn-helix domainchromosome CDS2329660 705 + 0.636879
NA ebA1370 Transcription elongation factorchromosome CDS805340 477 - 0.672956
NA ebA1212 putative serine/threonine protein kinasechromosome CDS712551 1788 - 0.701342
NA ebA6111 transcriptional regulator, LysR familychromosome CDS3619212 927 + 0.658037
NA ebA3804 transcriptional regulator, AsnC familychromosome CDS2242086 480 + 0.647917
NA ebA2046 probable TetR-family transcriptional regulatorchromosome CDS1202466 909 - 0.686469
NA ebA274 helicase/SNF2 family domain proteinchromosome CDS167114 2652 + 0.559578
NA ebA4984 conserved hypothetical proteinchromosome CDS2965751 2112 + 0.696496
NA ebA7146 Two component response regulatorchromosome CDS4216383 663 - 0.648567
NA ebA4502 ATP-dependent RNA helicasechromosome CDS2671502 1476 - 0.674797
NA ebA715 TetR-family transcriptional regulatorchromosome CDS411636 750 - 0.626667
NA ebA5163 Transcriptional regulator, AraC family,chromosome CDS3060643 1032 - 0.666667
NA ebA4487 regulatory protein, GntRchromosome CDS2661082 651 + 0.6851
NA ebA1734 Ribonuclease IIchromosome CDS1007928 1911 + 0.682889
NA ebA6513 transcriptional regulatory protein,TetR familychromosome CDS3859430 591 + 0.620981
NA ebA4032 transcription regulator protein, lysR familychromosome CDS2375110 867 + 0.72895
NA ebA5964 GCN5-related N-acetyltransferasechromosome CDS3541323 492 + 0.621951
NA ebA2413 helicase (Snf2 family)chromosome CDS1443856 2880 + 0.621181
NA ebA5533 hypothetical protein, INTERPRO suggestion: Beta tubulin or Prophage regulatory proteinchromosome CDS3293023 210 - 0.590476
NA ebD107 putative phage-like regulator proteinchromosome CDS3540015 312 + 0.612179
NA ebA5018 Transcriptional regulatory protein,lysR familychromosome CDS2983058 921 - 0.679696
NA ebA3634 putative transcription regulator protein, merR familychromosome CDS2151843 486 + 0.648148
NA ebA3801 putative two-component response regulatorchromosome CDS2239793 627 + 0.641148
NA p1B327 putative kinase1 CDS179626 1503 + 0.586161
NA ebA6572 predicted transcription regulator containing helix turn helix domainchromosome CDS3894665 444 - 0.554054
NA ebA3210 putative response regulator receiver proteinchromosome CDS1918192 1806 - 0.607973
NA ebA5646 Transcriptional regulatory protein of IclR familychromosome CDS3352942 801 - 0.617977
NA ebA4655 putative transcriptional regulatory proteinchromosome CDS2747776 1062 - 0.677024
NA ebA508 TetR-family transcriptional regulatorchromosome CDS292005 618 + 0.627832
NA ebA350 hypothetical proteinchromosome CDS216679 342 + 0.555556
NA ebD97 fragment of hypothetical proteinchromosome CDS3490366 330 + 0.651515
NA ebD72 hypothetical protein with response regulator domainchromosome CDS1912461 444 - 0.637387
NA ebA3727 putative response regulatorchromosome CDS2194871 681 - 0.656388
NA ebA6134 putative transcriptional regulator,helix-turn-helix typechromosome CDS3635797 594 + 0.6633
NA ebA6755 transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family)chromosome CDS4011698 1407 + 0.658849
NA ebA2491 conserved hypothetical proteinchromosome CDS1499464 423 + 0.600473
NA ebA5610 transcriptional regulator, LysR familychromosome CDS3331095 969 - 0.671827
NA ebA6729 response regulatorchromosome CDS3994088 711 - 0.655415
NA ebA3993 conserved hypothetical protein,predicted protein kinase familychromosome CDS2355146 1506 - 0.701195
NA ebA2019 GCN5-related N-acetyltransferasechromosome CDS1191698 504 + 0.597222
NA ebA5682 Transcriptional regulatory protein,MarR familychromosome CDS3375437 546 - 0.602564
NA ebA537 predicted transcriptional regulator,rf2 familychromosome CDS309579 636 - 0.591195
NA p1B199 hypothetical protein containing helix-turn-helix motif1 CDS113679 606 - 0.589109
NA ebA3439 DNA-binding response regulatorchromosome CDS2039609 720 + 0.669444
NA ebA2797 conserved hypothetical proteinchromosome CDS1664575 2013 + 0.702931
NA ebA4796 Serine/threonine-protein kinasechromosome CDS2841073 1362 + 0.631424
NA ebA6482 transcriptional regulatorchromosome CDS3845541 921 - 0.634093
NA ebA6247 transcriptional regulator TetR familychromosome CDS3698658 609 + 0.655172
NA ebA1803 putative LuxR-family transcriptional regulatorchromosome CDS1050191 624 - 0.692308
NA p2A358 transcriptional regulatory protein2 CDS195367 669 + 0.603886
NA ebA5855 probable ATP-dependent DNA helicasechromosome CDS3485155 1401 + 0.621699
NA ebA6235 DNA-binding response regulatorchromosome CDS3692926 660 - 0.660606
NA ebA5688 hypothetical proteinchromosome CDS3378002 315 - 0.653968
NA ebA2001 GCN5-related N-acetyltransferasechromosome CDS1182560 495 + 0.608081
NA ebA4111 transcriptional regulator, Bvg acessory factorchromosome CDS2426206 729 - 0.705075
NA ebA6693 transcription regulator proteinchromosome CDS3976304 729 - 0.628258
NA ebA803 putative helicasechromosome CDS465886 1533 + 0.650359
NA ebA2431 conserved plasmid related proteinchromosome CDS1462975 2274 - 0.644679
NA ebA1686 probable serine/threonine protein kinasechromosome CDS985793 2064 + 0.676841
NA ebA3295 Transcriptional regulatory proteinchromosome CDS1962768 831 - 0.684717
NA ebA1182 Two-component response regulatory proteinchromosome CDS691075 687 - 0.652111
NA ebA5218 conserved hypothetical proteinchromosome CDS3090418 891 + 0.603816
NA ebA5924 hypothetical proteinchromosome CDS3522437 348 + 0.591954
NA ebA1369 putative transcription regulator protein, lysR familychromosome CDS804425 915 + 0.681967
NA p1B250 hypothetical protein1 CDS134088 984 + 0.567073
NA ebB62 GCN5-related N-acetyltransferasechromosome CDS1184566 405 - 0.639506
NA ebA2446 hypothetical proteinchromosome CDS1472093 504 - 0.632937
NA ebA1753 putative transcriptional regulatorchromosome CDS1026237 567 + 0.657848
NA ebA666 helicase (Snf2 family)chromosome CDS389311 2898 + 0.652864
NA p1B57 DNA helicase1 CDS25305 2016 - 0.582837
NA ebA6738 Transcriptional regulator, TetR familychromosome CDS3999380 867 - 0.648212
NA ebA3750 putative transcriptional regulatorchromosome CDS2210509 828 - 0.682367
NA p2A165 hypothetical protein2 CDS91892 273 + 0.582418
NA ebD15 conserved hypothetical protein, putative regulatorchromosome CDS3492996 303 + 0.610561
NA ebA2467 conserved hypothetical proteinchromosome CDS1485430 1692 - 0.675532
NA ebA483 transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family)chromosome CDS276634 1407 - 0.658849
NA p1B135 fusion of domains from two conserved hypothetical proteins1 CDS68740 456 + 0.563596
NA ebA5314 TetR-family transcriptional regulatorchromosome CDS3156611 897 - 0.671126
NA ebC12 putative cold-shock proteinchromosome CDS2658239 204 + 0.534314
NA ebA5056 putative transcriptional regulator,lysR familychromosome CDS3000983 924 + 0.685065
NA ebA1664 probable sigma-N-dependent transcriptional regulatorchromosome CDS972588 1320 - 0.695455
NA p2A60 hypothetical protein2 CDS38332 1299 + 0.658968
NA ebA3131 hypothetical proteinchromosome CDS1864826 480 - 0.710417
NA ebA5860 predicted ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteinchromosome CDS3488200 591 + 0.595601
NA ebA6834 conserved hypothetical protein, putative s1 rna binding domain proteinchromosome CDS4053588 2349 + 0.700298
NA ebA2682 putative helicasechromosome CDS1594124 1167 - 0.650386
NA p1B136 putative histone acetyltransferase-related protein1 CDS69206 492 - 0.599594
NA ebA6875 predicted regulator of plasmid copy numberchromosome CDS4075128 237 - 0.535865
NA ebA639 conserved hypothetical proteinchromosome CDS373805 303 + 0.590759
ORF3 ebA5292 putative regulatory protein,conserved in anaerobic benzoate degadation gene clusterschromosome CDS3140724 453 + 0.576159
acxR ebA4722 Sigma-54 dependent transcriptional activatorchromosome CDS2788320 2043 + 0.666667
araC ebA3764 Transcriptional regulator, AraC family,chromosome CDS2216986 1137 - 0.694811
arsR ebB173 transcriptional regulator ArsR familychromosome CDS2971332 375 + 0.650667
badR ebA1957 Transcriptional regulator, protein,possibly involved in regulating genes for cyclohexanecarboxylate metabolismchromosome CDS1149346 504 + 0.642857
bolA ebA1303 BolA-like putative cell cycle proteinchromosome CDS768659 258 - 0.600775
boxR ebA2762 putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domainchromosome CDS1642653 903 + 0.667774
bzdR ebA5278 Putaive regulator of anaerobic benzoate metabolic operon consisting of shikimate kinase-like domain and a Helix-turn-helix domainchromosome CDS3134434 858 + 0.632867
colR ebA3319 DNA-binding response regulator ColRchromosome CDS1975791 684 + 0.590643
cspC ebA2865 probable cold shock family proteinchromosome CDS1708040 570 - 0.564912
cspD ebA3470 probably cold shock transcription regulator proteinchromosome CDS2055714 204 - 0.583333
cysB ebA2615 Transcriptional regulator, CysBchromosome CDS1559940 942 - 0.651805
deaD ebA5738 ATP-dependent RNA helicase DeaDchromosome CDS3402825 1977 - 0.670207
dinG ebA6678 ATP-dependent DNA helicase-related proteinchromosome CDS3961573 1956 - 0.671268
gntR ebA5664 transcriptional regulatorchromosome CDS3363106 684 - 0.603801
greA ebA4816 transcription elongation factorchromosome CDS2854120 555 + 0.590991
greB ebA4864 transcription elongation factorchromosome CDS2891657 561 + 0.643494
hepA ebA251 ATP-dependent helicasechromosome CDS145949 2943 + 0.621475
hrcA ebA4803 Negative regulator of class I heat shock proteinchromosome CDS2843992 1026 - 0.638402
iclR p2A140 putative IclR-family regulatory protein2 CDS81579 789 - 0.622307
iscR ebA6404 Iron-sulphur cluster assembly transcription factor IscRchromosome CDS3804701 483 - 0.639752
lasR p1B112 hypothetical protein1 CDS57622 687 + 0.550218
lexA ebA3086 LexA-SOS-response transcriptional repressor (RecA-mediated autopeptidases)chromosome CDS1840639 612 - 0.686275
lysR ebA811 transcription regulator proteinchromosome CDS469694 900 - 0.657778
lysR ebA2202 transcriptional regulator, LysR familychromosome CDS1293237 888 + 0.676802
lysR ebA2490 Transcriptional regulatorchromosome CDS1498860 627 - 0.658692
lysR ebA1372 transcriptional regulator, LysR familychromosome CDS805897 906 - 0.6766
lysR ebA4142 transcriptional regulator, LysR familychromosome CDS2441392 897 - 0.666667
lysR ebA2966 transcriptional regulator, LysR familychromosome CDS1765736 948 - 0.682489
marR ebA4868 transcriptional regulator(MarR family)chromosome CDS2895984 516 + 0.612403
marR ebA3908 transcriptional regulator (MarR family)chromosome CDS2306614 477 - 0.563941
marR ebA3444 transcriptional regulator (MarR family)chromosome CDS2041817 492 + 0.670732
marR ebA5386 Bacterial regulatory protein, MarRchromosome CDS3199412 462 - 0.616883
mfd ebA6555 Transcription-repair coupling protein Mfdchromosome CDS3885874 3474 + 0.669545
narL ebA6278 Nitrate/nitrite response regulatorchromosome CDS3715575 681 - 0.629956
narL ebA3508 Nitrate/nitrite TWO-component response regulator NARLchromosome CDS2071301 663 + 0.669683
nirD ebA881 NIRDchromosome CDS517194 1038 - 0.66185
nirG ebA880 NirG protein precursorchromosome CDS516718 480 - 0.652083
nirH ebA878 NIRHchromosome CDS516134 588 - 0.647959
npd ebA3329 NAD-dependent deacetylase 2 (sirtuin/SIR2 like protein)chromosome CDS1982298 783 + 0.694764
nusA ebA5840 N utilization substance protein Achromosome CDS3473307 1476 + 0.621951
nusB ebA3564 N utilization substance protein B,transcription termination factorchromosome CDS2107890 438 - 0.643836
nusG ebA3811 transcription antitermination proteinchromosome CDS2244748 534 + 0.55618
ompR ebA4468 DNA-binding response regulator OmpRchromosome CDS2651277 762 - 0.675853
ompR ebA6497 Transcriptional regulatory protein similar to OmpRchromosome CDS3850565 747 + 0.615797
paaR ebA3555 probable transcriptional regulator of paa operonchromosome CDS2098341 618 + 0.640777
padR ebA5390 PadR protein, putative regulator of anaerobic phenylacetate metabolismchromosome CDS3200495 957 - 0.634274
parB p2A290 ParB, partition protein2 CDS160560 1092 - 0.60989
parB p2A246 plasmid partition-associated transcriptional repressor protein2 CDS140446 1044 - 0.623563
parB p1B141 partition protein parB1 CDS71815 894 - 0.548098
parB p1B79 hypothetical protein1 CDS38035 1674 - 0.597372
phoB ebA3019 Phosphate regulon transcriptional regulatory protein phoBchromosome CDS1801569 708 + 0.680791
poxR ebA5755 Positive regulator of phenol-degradative geneschromosome CDS3414973 1713 - 0.597782
recG p1B53 ATP-dependent DNA helicase1 CDS23627 1542 + 0.610895
recG ebA2297 RecG-like helicaseschromosome CDS1352655 1959 - 0.696784
reg1 c1A220 Transcriptional regulator, TetR familychromosome CDS1372978 702 - 0.700855
reg2 c1A250 Regulatory protein, LysR-familychromosome CDS1386021 651 - 0.6298
reg3 c1A53 Regulatory protein, LysR-familychromosome CDS1387090 903 - 0.59247
relA ebA6528 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)chromosome CDS3870713 2202 - 0.65168
rhlE1 ebA3563 ATP-dependent RNA helicasechromosome CDS2106258 1392 + 0.688218
rhlE2 ebA3682 ATP-dependent RNA helicasechromosome CDS2171527 1527 - 0.685658
rho ebA4743 Transcription termination factor rhochromosome CDS2805061 1260 - 0.607143
rnc ebA5539 ribonuclease IIIchromosome CDS3297904 678 + 0.651917
rpoA ebA3853 DNA-directed RNA polymerase (alpha subunit)chromosome CDS2273270 981 + 0.635066
rpoB ebA3818 DNA-directed RNA polymerase, beta chainchromosome CDS2247844 4134 + 0.639332
rpoC ebA3819 DNA-directed RNA polymerase, beta' chainchromosome CDS2252012 4230 + 0.638771
rpoD ebA4365 DNA-dependent RNA polymerase sigma subunits (Sigma70/32)chromosome CDS2581941 1992 - 0.616466
rpoE ebA4517 RNA polymerase sigma factor (sigma24)chromosome CDS2678805 570 - 0.670175
rpoE2 ebA5463 Sigma factor, ECF subfamilychromosome CDS3259371 600 + 0.588333
rpoE3 ebA6072 ECF-family RNA polymerase sigma factorchromosome CDS3595278 696 - 0.686782
rpoE4 ebA7129 RNA polymerase sigma factor transcription regulator proteinchromosome CDS4208244 498 - 0.646586
rpoH ebA4241 Sigma-32 factor RpoH (RNA polymerase sigma factor)chromosome CDS2498846 852 - 0.638498
rpoN1 ebA3393 RNA polymerase sigma N (Sigma 54) factor transcription regulator proteinchromosome CDS2015440 1434 - 0.634589
rpoN2 ebA6931 RNA polymerase sigma N (Sigma 54) factor transcription regulator proteinchromosome CDS4110717 1443 + 0.668746
rpoS ebA778 RNA sigma factor RpoSchromosome CDS447348 936 - 0.616453
rpoZ ebA3495 DNA-directed RNA polymerase omega chainchromosome CDS2064208 216 + 0.62963
rumA p2A243 DNA repair protein2 CDS138554 477 + 0.618449
spoOJ ebA2907 ParB-like partition proteinchromosome CDS1730389 870 - 0.694253
spoT ebA3497 guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolasechromosome CDS2064449 2199 + 0.657572
tcr1 c1A77 Two-component response regulatorchromosome CDS1401498 621 - 0.566828
trbA p2B1 TrbA protein of DNA transfer system2 CDS12049 363 + 0.548209
vacB ebA1247 exoribonuclease RNase R (VacB protein)chromosome CDS732581 2541 - 0.658402
waaP ebA3995 Lipopolysaccharide core biosynthesis protein WaaPchromosome CDS2356648 828 - 0.677536