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# Acinetobacter sp. ADP1, ADP1

>ACIAD1097 hypothetical protein
MDINLENTDLNQEQKRLAEQHDQEENNYKVLKNLFYSNERISVYNYTAYN
MSDLKNKVIDGSTDHLGVSDLSISFGYGLSYQLRQDTRLGYEYISSFPYN
RGQLIRFFWIRSF
>ACIAD1817 putative transcriptional regulator (AraC family)
MTEMNQINLEISANRPLVDEQQQVHLRQHECSSNTKEYAVQTSHYYRLQI
DTQRALSIIEANTSSTPLLQSPLDTTVEEQTQQEISSYILSTWIKLEEDK
LRQSMCITPKYIKLAEQYIRNNIRQSPLKIEEIAAYANVSIRTLSSGFRK
YRNISPSLFIRDLRLEMVREELLNAGGGKSIAEIAYASGYLNLGTFIRLY
KQKFRELPSTTLRCYFKE
>ACIAD1543 putative transcriptional regulator (LysR family)
MEIKQIKYFSTVVEAGSIGKAAQKLDVGASAISQQITKLEQELCIRLLQR
NAFGVTPTPAGLAFLKHSQLILRQINFAIDAAHSARLSGHVSLGFPPTIS
ALIGIPLMKLMSERYPDIRLEIVETLSGNLIQSINSRQLDIAIIFTHEID
KQWAIQPLVKEQMYLMARKEVLIKHGLSDCLQTGIIQSQQIGDIPLVLPR
QRHSLRKLLEHKIGQLNVVYEIDGLHLLMDSLIHLDLASVRPGSACLQKY
KHQIQLLKVIDPEIERINYLVSLAEEELSPAALAAKSAIKACVKELIRAQ
IWPCSELIL
>ACIAD3556 putative transcriptional regulator (TetR family)
MTVPEPAQSTRSTSKKKSNERQFKGLSLSERKYARREKLIEAGIETYGTQ
GFFSVTVKDVCNEAKLTERYFYESFKKSEDLFQTIFLKQIEILQNNVMQA
VMQHTPSPEKMIKAGLTALLHTLKDDPRLARIIYIDAMLVQELHNQATIH
ETMMRFDRMIQAFVMLASPHIRYSEQELSLVASGLNGYVTQIAIRWVMGG
FKESIEDVLSACEIVFLSLVEKFSNREAN
>ACIAD0599 conserved hypothetical protein
MKILHIANFGFNKQGAHFYCTDRKISAGLVENGHFVYDFSFRDMARMGTI
FKTKKLGASWANKEILKIVNNLEPDLVLIGHSDLMSPEVLKQIKQQFPET
KIAFWYVDPLYLEHKLDFVKAFSPYLDAIFCTTAGEYLAKLKQPHLSAAY
MPNIGHRNVESLIQFKNLNTDKTFIFCGVVYKEPEREKFLKDLADALTQS
QVNYRYYGCFDQPGVYGKAYYKVLSESKMGLNYSRRNDVTLYSSDRIVQL
TGNGLLTFSPRIPGFEKLYTEQEVIYFDDQFDLAQKIQFYDQHPDLAKAI
AQAGWQKTRDSFNAKRITQYMLEVTFGQPLSEAYEWSHEVYT
>ACIAD1897 putative transcriptional regulator (GntR family)
MTKIEQVIHYVDQQLKSRRLTPGMRLPSVRSLAKQLNFSVSTVVNAYERM
LSMGLIESRAGSGFFVCAPLEPLILSHIEPIQDQNLDPLKISRQLLEASS
FLIKAGCGWLPDDWMPHEALRKAIRDTSKDSVFELMNYSSPLGLSSLREL
LARRLHTKDINVTPEQILLTDSGSYSIDLICRFLLKPGDTVLLDDPCYFN
FRALLKVHQVKVISVRYTPDGPDIEAFKQAIIEHHPRLYITNSGIHNPTG
ATLSQSKAHQLVSLIEHANMVVVEDDIFSDFETSASPRLSALDGLKNSIY
IGSFSKTLSASLRCGYIVTKSEWIDYLIDLKVATSFSHNNFSAHVLYKIL
THGGYRKHIEQLKIRLADAMIISIHRLEKIRIQPWIRPKAGIFLWCELPT
DINIQKLMSYCTEKGVILALGNSFGEAHTFQNFLRFNIAQCMHPDFFNIL
EDAMQYASMNRPLNSL
>ACIAD0813 putative transcriptional regulator
MIDIHKLNAFVAVVEESNISRAANRLHMQQPPLTRLIQSLEQDLNTTLLK
RLPRGVEVTEAGKVLYQEAVTILAHASSIPQRVQNIAQGKEGQINIGFTH
SIGLHPFLPTLLRHFREKFPAVSIHLEEDSSSALTDAVINEKLDIVFLRK
PAPKHTAVQTMHVLNETLIVALPSNHPLAMQQGAIHLPDLEPYEFVLYRR
LAGQDLFDNILANCYQAGFSPNIVQEAPRLTSSLNLIAAGIGLSIVPASI
QDFWNKQIIYRPLEAKKPCIAPIYAIYSAKDNNIRVAHFLNLLKASQSSG
NVFHINE
>ACIAD1979 putative transcriptional regulator (LysR family)
METGSFSAAARKLGKVPSAVSMSIANLEIDLDLKLFERKGREPVPTAQAT
VLHEKTAQLLIEMNQWKQQAYALSTGLESSLNIVIVSELLHTNWVDYIRL
VEQKFPSLHINIMSAPQEDALSMLLDQSAQLAWMFEREQLDHREQFVEIK
KEALLTVAANDHFLAQLDQVNFKHLLQARQIVVASRDNNIKPELLFSRHY
WRTDNHHSACMMILGGLGWGVLPAEMFNQNPKLSKQLKVLNVLDFTPKLE
YFIDLVWSRESNLGAAALFLINHLQMQRKQPNT
>ACIAD0132 putative transcriptional regulator (GntR family)
MSSITKSRSTKKLSQVIVEQLIETIQSGEFKIGEKIPTELELIEQFDVSR
SVIREAITELRSLGFVETRHGIGTFVKEQNIEQNFLLSNASLETINDIVA
LLELRISLESEAVFLASERRKNKHLEKMKIALNDFEAHISSGENDGTVKA
DYDFHIAIAEASGNQYFVDFLKYLGEKIIPRARVKSIEQSPENREEYLKT
VHHDHVNIYNAILDQDGLLARQMMRAHLSKSIKKFKQ
>ACIAD1657 conserved hypothetical protein
MSTLEKAIALAAKKHAGQIDKAGQPYILHPLRLMLNVDTIEQKMVAVMHD
LLEDTDTTIVDLISLGFSQNVIDAVVALTKKEGENRLDAAKRIVKNPLAR
TIKLADLADNMDINRIKSPTPRDLLRLEEYKKVKEFLLNPPALFV
>ACIAD2826 fragment of transcription elongation factor (GreB-like)
MPPYGKNLFSKSVNDEVHVQTPTGRKIWYINSMEYIQSYKTRTKLLLSTI
IKLVFDSLIFLSPAFY
>ACIAD0434 putative transcriptional regulator (LysR family)
MMDRLQQFEIFIEVAKRESFSEAALRLDLPRSTVTAAIQNLEASYKVRLF
QRTTRRVSLTQDGKRILPECQNLLADYQLLEQMIQTHHQDYQGIIKVDMP
SRISHQIVVPAIGDFFQQYPHIRIQLHSSDHLTNLVEQEVDCVVRVGILE
NSSLIAKTVGHLSMVNCASPTYLQTFGVPQQLKDLHQHQLVNYQNGVGDQ
QGTFFYGDQYIKLNTRLSVNNTEAYIQAARAGLGIIQVPYYDVYQDLLSG
RLVEILKDDVCPSLPLNVLYPNRHYIPRRLDVFMSWLIPLLQRQCCIRS
>ACIAD2293 putative acetyltransferase
MNDFQIREARLQDRLDLVDMINQSYRGAHGRSWTTEKNMIDGLRISTDQL
NEILLSHTIRFLVAEIKQHNHARLVGCLALNFSGHRVEIGTYCVANDFQN
LGLGQKILAYAEQYAVHIEPKLQYYDMYVLDARHELISFYERRGYAKTGT
TEAYPIDAHVGMPNIPIKLIHLQKAASIKTPT
>ACIAD0968 putative transcriptional regulator (GntR-family)
MIILMSKPLSEKKTSNNISDLIYGLLKEDIFNFVLKPGQRFTETDLSERY
EASRTPIRQALYRLEQEGFVHVHFRSGWEIRPLEFKYYQELFDLRMILEK
EAVKRLCELEHPEQLPALIELKKMWLIAPVDYLTDTKTLVLQSEDFHCAL
VRAAGNQQIAKIHQEASEKIRIVLSLGAMKEFDIAHAYQDHGAILQCILN
KDAEQAIHLAEHHVLESIHEVKNITLQMISAIH
>ACIAD1453 conserved hypothetical protein
MSKVKHSRFNCNPGCSVEAAIGLLDGKWKSLILWNLLTEKILRFNELKRR
IPNVTQRMLTNQLRELEQDGLIIRTVYPQVPPKVEYQLSALGQTLKPILV
ALKEWGDQHIDLYGKPHQSETEQHNEREQHTEITAQAG
>ACIAD3264 conserved hypothetical protein
MANAGLYRSNRQHIIAGVMGGIAERFGWNANLLRLIFVVVSVMSAAFPGI
LVYLILWLVIPKRPQQLEYQAMKGYEHPVRTVHEDHQRR
>ACIAD1839 putative transcriptional regulator (AraC family)
MIPVSLTERSKNLDRLIQKVSHLAETEGDHDSIISGLSFHNRMSPTDSTH
CIYSMGLSLVLQGQKEVIIGDNVYQCHEGHSMLTMMDLPVTSRIINASSQ
KPFLAVLLLLDIQVVNELVANLPVEAKTIISNDSHESFSVEFVDISLIDA
VMRLVKMLDEPKMIPHLADLVKKEIIIRLLNSSQGISFTPTGKVWFGKSK
DSSNRELAKKQFRTTHPYG
>ACIAD0757 putative transcriptional regulator (TetR-family )
MFKFLMIISMSKHIKRAAKNREDLLEAAVEMFKTHGMMVPLQVIIDHANV
GRATFYRNFADRKMLVYALLEQSLVKLKQRTQLYQTYPDGLIRLIQSHVN
HLNHLSALMEYWRVLDYSDTSLQALIQQHQRIIQPLIDQAILHKVCRPDF
NFEDYRSIVTMLSSSFRGHTEQEQIRMASRVIDLLLNGICLNQEESHG
>ACIAD0026 putative transcriptional repressor (TetR/AcrR family)
MEQKKSTQKRNQLLNAALDVFSTYGFSGASLDEIAQLAQMHKSNIFYYYE
NKEALYVEVLTTVLQKWLAPLQTLEVELEPTEALAHYLIQKIEVSRTQPK
ASKLFALEIIQGAPHILEILKGPLKKLFKRKAKVIQTWQEQGKISADIDP
ELLILNIWAITQNYADFSIQMEMVTGKTLKNKSMHQRAIEHTVHMMLYGV
IPRSV
>ACIAD2759 putative transcriptional regulator (GntR family)
MVAIFDICAYFNNSILVIVDIIMTELLEPAARASTQETLTDQIFKKIQSA
IVSGEIAAGSKISEPELARVYGISRGPLREAIHRLEGQKLVERTAHVGAR
VVSLSHQQLRELYQIRENLEGLACRLAAQSIDKQQILNLRDVLHLHAQDP
DFKEGKGYYLQEGQDDFHYCIIKNCGNKTLEKMLCDELYHLIRMYRVQYS
KTPNRPHRALSEHLHILNAIAEGDTELAELLMRRHIAASYRNIEQHFI
>ACIAD2358 putative transcriptional regulator
MKMDRQAQFRAREALIFEVAEQLLLENGEAGMTLDALAAELDLAKGTLYK
HFQSKDELYMLLIVRNERMLLEMIQDKQKSFPEHLAFFMLHHLHHPERTV
MFHQIEERLSTTGQGIYDLFQELYQVRKQRLRIIINMTEIYLQEIQSTMT
VRDYLAAIWSLTHGAAAILNSSFYQRYLGSRDTLRIAYIDQALAIPKHMH
EQYV
>ACIAD1422 putative 2-component regulatory protein
MIKILYIEDDVMIGKTTYQLLRHEKFEVDWAKTGLEALDFLFRQTYHLVL
LDLGLPELEGLDVLKHIRKKIELNKIAVIIISARDQSRDKIQGLKLGADD
YIVKPYDFDELVARIESVLRRGNYASLNELNFNVGQVQLFPNTHRILKDG
QPINLSTKEWSILEPMMMYPNQIFSKQMLEEKLYDCDDEINSNTIEVHIH
NLRQKLGKDFIRNVRGLGYCVETQEK
>ACIAD2817 putative transcriptional regulator
MTNLSNEDLGSDSKQNSGVAAVDRALLILSSFDIENPSLSLAEISRRTKL
YKSTILRLLNSLERHGYIRKNTDGLYSLSIMPLKLARIYQNSFNLKDIIY
PILEKISEETGETSSFYILDNESRVVLFRIEPVRSVKVSISEGDVFPVNV
GASGKILSAFSKQQIEARLEPIKENYWASSFGERDPETSSLSVPVLDGSQ
YLQGALTISGPSERLTSETINGYIPHLMKYGITISKQLGANTMLYEAAYA
NQL
>ACIAD0457 putative transcriptional regulator
MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIAL
FERLPNGLKLTLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGL
IAALSDGFVVDVLATLQSEFPWITLNILTDDSDVLINKIITNEIDVGLIL
DPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTLDTRHIVPDQP
LVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGIALLSYLDVYS
AVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQMEIK
FNHALAGFK
>ACIAD2053 putative transcriptional regulator
MMELDRYDKQILEILTHEDLNLNELSERINLSVSSVHRRIKHLIESNIMS
HLKRDINFTKLGFSLHILLQVSLSKHDTETFDKFLAELEDIPEVTNAFLV
TGQSADFILELVARDMDNYSDILLRRIGKIDNVVALHSSFVIKEYNVFNC
YKLLNKV
>ACIAD2342 conserved hypothetical protein; putative transcriptional regulator
MSLPIEIVAKGLHRERQKAGLSLAELARRAGIAKSTLSQLEAAQGNPSLE
TLWSLCVALEIPFAKLMESNIPQTQVIRFGEGPSVASEIAHYQAILLANC
PTGARRDVYILNTQPGEPRLSHPHPIGSIEHIIIMKGCAKVGLTAEPVVL
NEGDYICYPADQEHIFEALDEDTRAILISEQR
>ACIAD0844 putative transcriptional regulator (GntR-family)
MNLDDIESLSEQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVRE
ALLLLERTHLIEIFPRRGAIVSEMSSQQVKALFDSSVLVLGHIVQKISES
WRVHEAEQLQHLIEQLNEHVKAGDTEKFYDGIFEYLAQQHDMVMNAYLMK
FYKELLPSLRRSYFLTLNTSRRELQEALALFKLVTDAILIRKSHQATLFM
EDFCRHLRNLVLESLTRMKQIELAWARRSRRSSNR
>ACIAD1747 putative transcriptionnal regulator (MarR family)
MTNKYAKYFPTHDDFDLEEFPYYLISQVHALYINKIDNSLKKHGLDNSRR
RILLAASTRQDASISDLAEMALIKIPTTTKIIYRLKDEGYVETSLCENDN
RVTRVALTKLGHEMVIKINEITSLLFNDSFSGLKPSDIKRLNESLRVIKN
NLA
>ACIAD1313 putative cold shock protein
MTAREQGVVKWFNDTKGFGFIQRNGGDDVFVHFRAIMGDGHRSLRDGQRV
EFSVVQGQKGFQAENVQPLD
>ACIAD1875 putative transcriptional regulator (AraC family)
MQYIGQSNGSRMKINSARQEQGIPGVYGLLLLDVVSRWGYNDETLFAPFH
LSSEQLADPEYRIPIHIANELVKHALKLTGESTLGYHLGNQMRISIHGFI
GYAIMTAHDITDALALATRFIQLRMPFLQLYFSTFGPKATLQLQCDFDLE
PLRTEIILSLTIGIMSMAKALTGCDELTGEVDLDFEKPEGFNKYLEKMNL
NMRFDQPHLISSFDKHYLGLKMVNADPIASQIAINQCETELSALGERRRL
AMRVRDILTHSEQHYLSIENVADLLHMSDRTLKRQLAAEGTSFSTLVDEV
RYRHATSLLSRTDYSLEQIADELGYSDVANFSRAFKRWSGRSPSNWRKDP
YL
>ACIAD1650 putative cobalamin biosynthetic protein (CobB)
MKKLVVFSGAGMSAESGIHTFRDHDGLWENYRIEEVATPEAWQQNPSLVQ
HFYNERRKNILAAQPNLAHQIIAQLESCYQVQVITQNIDDLHERAGSTHV
LHLHGNIRLAKSSGPNAQFTQTFYPIDGWQLDLNQDKCNEGYPLRPHVVW
FGEAVPAYDDAIAMLKDADVFIVIGSTLSVYPVAGLIHEIPNHCEAYYID
PQADYFRVPHQYTLLKMTATEGMKQLYLKLKNL
>ACIAD1653 conserved hypothetical protein
MSLAHVLLTSLLEKPSTGFELARRFDRSMGFFWNASHQQIYRELNSMLGK
GWISTVQGEEAQTRKKTYQVEQPGHVELSSWLIQQSEPSQLRDDLMVRLR
AEAQLGNNQILPELERHLMLHQEKLKLYQTIYDKDFTQNFPENRVLFIHK
KILQLGITTEKEWIKWLDEVIPALKSFETD
>ACIAD0473 putative transcriptional regulator (AraC family)
MGQLTDASVVLRFGYQAIRRAGLPTEEILMKAGVALNQVDTNSRTPVSAQ
YAFWVAAEEVSKDPDIGLHLGEHLPLYRGQVIEHLFISSENFGEGLKRAL
AYQRLISDVFHARLVMEDGRCYLTNGEQPFADTIVNRHFSECAISGILRF
FKFITEGAFQPIFIDFNFNEGASEDEYFRVYGCPVSLGQRETRLYFDSDI
LNYPLWQAEPELLQLHEQLAIEKLQELARYDLVGEVRRAIGSTLESGETT
LETVASQLHITPRRLRTQLSEANTSFQQILSDYRCRLAKRLLANTSESVE
RIVYLTGFSEPSTFYRAFKRWTNETPVEYRKRKQR
>ACIAD1559 putative transcriptional regulator (MarR family)
MAERACILKPSLTGILNRMQNLVIKRKDEQDQRISLIRLSEEGLNHFEHQ
AVKMEKSYARIQELYGEEKLKELIEMLKDFEKVRLSD
>ACIAD0850 hypothetical protein; putative signal peptide
MSKMNKKFRLIFQNLITAFILVSVTNSSFANIYIPISFFKKPDHSKTVKA
KVFKTEDFDATTLQLLNEGFVPIQSKKFDGHDSAKGYEYIVSNMEKRADT
LGASMVVFSDQPSANMYGYYTFLNPAPQNPQNQRSNDHFFGSNTSNGLTE
SAPVYNPQKKYQVSYFYKFDSITGIYPVDLSDADQSKTGYT
>ACIAD0461 putative transcriptional regulator (LysR family)
MNLAAFEAFIKVMETGSISLAADQLFITQPAVTKRIHSLEDYFGVKLFES
AGRGIQATHAAHSLLPKVKNWLNELGEIHHTLSHEHDQVQGRLKIGTSHH
IGLHHLPKPLRNYVQQFPDVTLDVHFVDSEQAHEQVFAGDLELAFLTLPP
QGDERLKYLTIWNDPLVFVVAPFHPLAHKQNIELQDLLEYPSLLPSSQTY
TSQITLQAFEKHGLKPKITMSNNPLESIRMLVSIGLGWSVLPKTLLNQDL
TQLQLEVDLNRQLGIVWHPARIQSKAAKALIAYAQDSTLTESL
>ACIAD1344 putative transcriptional regulator
MSQGLDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGM
IIGYFAQVHPQAEKQPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVY
KLTGSYDYVLKVTVEDLNQMSQLINQLMSLNISIGNFNTSIVLERIKENH
QMMNTGKSNDTHG
>ACIAD1539 putative transcriptional regulator (LysR family)
MELKQLKYFIAVIESGSLGKAAKNLDIGTSALSQQISKLESELSIRLLQR
TTLGTVPTPAGLAFFQQVQLALRHLEHAVDSAHSSRLSGHVTVGFSPSVA
AVIGTHFLKLMRNRYPDIKVRLIEGLSGDLKALVNARQLDVAIIFRDDVD
PQWAIQPLVKEQMFLISPKEVLSQYHLESCIDTQTITHTQLKALPLILPS
QRHGLRLLLEQKIHQLKVAYEIDGLHLLMESISQLEMATIQPAGAALNSR
QDLCLLRVVEPAIERINYLISLSEEELSPATLATKVVIRACVTNLIQEKR
WPSAKLINT
>ACIAD0196 putative regulator (TetR/AcrR family)
MIVIKIYVVFMTDVANCAEQNSPEQAVKKKRGRPKCFDEQAALEQAMLLF
WEHGYEATSINDLTQLLGITAPSLYSTFGDKATLFYKSIDYYLAHEACPI
DRMFEQAKTARIAFELYMYDNLNRLLQPNKPSGCMLVVATMNCSESTQDV
QQNLLAKRLKTKEKLMQRLQKGISEGDLPEHIPLEAMTDFYCTVIQGLTM
QARDGASLAQLTKVVEHAMRAWSLFVDTHGETTI
>ACIAD0840 putative transcriptional regulator
MKQLWLDIGNTRLKYWITQNETVIEHAAELHLQSPSDLLLGLIQHFNHQN
IQKVGVSSVLDQHNNDRIRSILKRLHIPMIMAKVHQEYAALRCGYDHPEQ
LGIDRWLQVLAVAQPDRNVCVIGCGTALTIDLVKGYQHLGGYILPNLYLQ
RDALIQNTKGIKIPDSAFDDLEPGHNTIDAVHHGILLGLVSTIQTIMQQS
PQQLVLTGGDAPLFAKFLQPYHPQIEPDLLLKGLQHYVRHQLP
>ACIAD1336 hypothetical protein; putative protein kinase
MFVLQNLTLTTKARRYALGRRLYTFERQNQLYWLKLQCSRGESSTQRSFY
NELSFYQWAEQYLTHILPVQIIDKTQIEHSEPIEPYAIVLPHAEPVFHLP
ASELSLKEIYTTIDKMLGALAEFEGINCIHGDLKAEHFVKFNGSVCLIDF
EQAIYPSCHIALQEMTATPRLMAPELFHGSYKTIQSDLYAFGIILYEWLS
ETRLYAKGYRDWAYLHCQKFYPVLPERYQHLLPLFKILLAKQKEQRCATV
KQAKISFEQLKLSI
>ACIAD1152 putative transcriptional regulator
MNIDISDIRSFITVAELKSITAAAQKLNYLQSNMTAKIKKIENHYNKQLF
IRKPKGVELTVPGINVYQQFKKMLFTWEETENKIQQHDNVLRFGTNTSLG
GMRFYSSFSQLYQAYPDLSITMKTGATGYIEEEILNGNLDIAYVLGHPKQ
KNLQYIQKAEDQLVLIGKNVINHENIQDCLDHQNILFASEQCCYATILDN
IYTDYNLTKGELTHIYDHEALIHFSQLGMGISMIAKSLVKKFNIQYYREV
PELYRNIGLYLISRNNHVFTPIEKQFIDLNNALEKV
>ACIAD2851 conserved hypothetical protein
MLMFNDLLLPMFDDGYYPEVLVAEVKQHILDFFKKIQKNHKSESDIYQLA
ALTLVRINEMKPLFEDLDSGLDETATDYIAEAMMMVVQEAGYLDIDLEEL
VANREW
>ACIAD1834 putative transcription regulator (AraC family)
MTLMNDLNPVIEKTKSLARKVDGLVKNEDFQTEISGFSLHRRVNKQSIHC
IYDLGLGVILQGEKQVLIGNEIFSYGCGQTMLTTIDLPAVSRLTQVSYSE
PFLGMMLKLDIGMITEIAGSMENINVTSNIPSFSIEQMDLGLIEALDRLV
DLVEDPSLISQIAPLIQHEIIVRLLLGKHGDYLRNLIKISVSEKNIFKVI
SWLRNNFLNDVRVDEIAEQANMTSATFRNHFREITRMTPLQYQKQLRLQE
ARKLMLMQSIEIRRVAESVGYESQSQFTREYVRLFGITPQKDLKENTAK
>ACIAD1462 putative transcriptional regulator (GntR family)
MNLSLHYNLDNRNAMKPHTLVKRSSSQVTDQAVEVIHERIQQGFYPVGSA
LPSQRELSAELGISRASLREALTRLAALGLLNIMAGKGAYVTAIESQPVE
QWNIQFKISLKDFYQLRYILEGFSALLACEYISENDLVQLNTHFEQLESA
IQQHNWQEAAENDFAFHRHIIDLSHNQSIIQSLKKQTEWMKQSQILPFVQ
PNLAYKTIQEHEQILQALIKRDGLMAEKAMRQHIIGAAQRAGVYFSSHS
>ACIAD3613 putative transcriptional regulator
MTFYYQRLAQQIAHKIYQQQLLPQQKLSSLRDFATQHQVSISTAKSCYEW
LEAQGLIYVKPKSGYFVKPKSNVSRLPVSPEFESMPRQVSNLMLQNQIQE
ASIQNHLIPFGAIQLSPELVPIDGLRRSIQRALKYCKPEDFLYCEKQGHL
RLRQALSEHWREDGIYVAPNDIFITNGCMPALSLLIQQLSREGDSILIPT
PTFNGQLQLLAGLNRHIIEIPADHTGIDLLRLEQAMQMHQPKLCLLTANY
QNPLGYCLADEDKQKIAQLAARYQCIILEDDIYAECSHHGQRPRPIKYWD
EAGYVIWVSSVSKSLSSAYRVGWFCIGSQLEPMRPRFLSHNMTVNTPLQL
ALADFIFSRGYRRHLNQLHPRLMQQVEAYRDVILNAFAPLTIGLSQPQGG
YALWLELPDNINSVTLYEVAQQQGISIVPGTVFGEDQRYGHFIRLSVGHA
LQNEHHAAIIFLADWVKQHC
>ACIAD1002 putative acetyltransferase (GNAT family)
MNITLAVLQLEDIPQAKQFAIRTRQLLFPDVYQLALPYDLTHFQDVYLHD
QKGACFVVKDQQHNIIGMIAYRAYNHRFALDIPKDSVEVVKLFIQPEYRR
QGLASRLCEALFGYAAQQKIKYFYLHTHPFLPAAEYFWTKQGFDVIHREE
IQNYDTIHMFKSA
>ACIAD1935 putative sigma-54 dependent transcriptional regulator
MVIIMSRYSAPQIFSLEGEQAQPLSIRAKALVYHDPVSKNLLQLIERLAP
NDIPILIQGETGTGKELVARHIHHLSGRKGPFLAVNCGAINDQLAESELF
GHEAGSFTGATGQRKGWFESADGGTLFLDEIGDLPLHLQVKLLRVLQERE
VTRVGARKAIPVDIRLVTATNVDLEQAVQAEQFRQDLLFRINIAQLELKP
LRERKGDILPLFQHFLQKYGEKIKKEANLILSPTVVTALYDYPWPGNIRE
LENIAHYAVLVAEGHLIKKEHLKFNKLFQNFNIEQPTSETAKSWENPFDG
IEYQLKRIFAAPTLPSNLWDRLEQLIIATSFEYCQRNQVQTSVLLGITRN
VMRTYLKRHNLVNDALNFKIVNE
>ACIAD0444 putative transcriptional regulator
MFLSDKKLEVQMSRSIRLLNLLQHLREAKYPVTSQTLAAQLGISQRSVYR
DIETLRQQGVRIDACAGMGFQLKEDFFLPPITLNETEVEAIFLALHWLKS
VPDGELQCASSSVLTKLNSVLPAHRQHLLEQTTLRAFNVWLPVDMKILEQ
IRMAIRRQVKISVMYWDEQQRESHRILWPFAMGYFNDKIMLAAWCELRQA
FRNFRIDRIQQLHLSQEIYPQFKQKLFHQWWTQEVCSTTDKN
>ACIAD1455 putative transcriptional regulator protein (AraC family)
MFQMNTAQLLGTSMCNQGVLSAAASGLSDFISSKGADVDRVFGISGINPE
LLASPTLSLQLPNYCHVLEQAAELSGCDNFGLHYGQQFQPKSLGLIGYIG
LCSATLESALVNMTNHFYLHQKDTLNRMVDLGDCWRLDYQVHHGAILTRR
QDAELTLGMFMNVIRGVLGGHYSPREIHFEHTRPEFWQEHSKLFNAPVYF
DQPFNSILLSKKDLQHPMPNHDPLLLTVILDTLRLLNTHVHRQSLTDQVR
SHIQIELNTGEPNLEKIAHDLDLSSCALTRRLKLEGLTFSSLVDKVRCEL
AEHYMKQKNIPISEMAFLLGYSEVSAFSRAFKRWFGVNPRQWRN
>ACIAD3626 putative transcriptional regulator
MQASGRPKDLEKRKRILEAAKIAFLKHGYHNASMNQIAKDAGVTKLTVYN
HFQDKANLFICAIEESCQECIATRNFQLSAENDFLQSLHHVCECAIYTIY
LPEALKLEHVLFELAAEQSPLTEKFFNASHQRLCGSMTDFFQQASNLGFI
RADIPIKQTELIMSLLLGLRHHHVLLGMEAAPNTDELQQSITDAIEIFML
KYGI
>ACIAD3019 putative two-component response regulator
MYFIQPTRSIPNLDDALHALPDLQVIHIDDIDLYDPTIIAIADVQDYLTH
QWNLPTIVIGFEHEGTALSHAWEMGALAGWIWGKLPKNSNEALLKIDAKY
KRNQDSRDLPAAADLQKKLLPNPIDLLDYKIEAFFQPSAYLSGDWYDYWK
LNDKEVLFYLADVSGHGVTSSLLTSWMAAFHGRSKTPRELIKKLNGMLLQ
ENIEKHITMVVGILNLQTNQIRWSSAGHYPPPIIFEPNQPPKILTTSSFP
LGLIDELEIEEFECTLNRHSRFIVCSDGALEPFDGGLNDQFSQLLDHLQK
QSFKAPDHVADDIAILSLCRMN
>ACIAD1602 putative transcriptional regulator (LysR family)
MKVDWDHLQFFLVLARVKTLTNTARIIGVEHSTVSRRIQALELALGSTLF
KRESTGYELTLEGLALIPHVEQMEQAFLQIEKSGSPLQGHVRIGTPEGFG
TAFLAQLLAELSKQYPLLTIDLIPVPKMIKLSHREADIVISIDRPKSGPY
IITRLTDYCLKIYGSKNYLENTPDIKKLDDLMHHRFVNYIDDLIYSPELY
CLERLPLQLNANFRSSSILAQQMAVSAGAGLAILPKFLAENRSELQQVLE
NEVRFIHTFWMLTLVDLQHEPRIKLVWDFLRTQVDQYQDLLMDR
>ACIAD3386 conserved hypothetical protein; putative RNA binding protein, contains S1 domain
MLLNLILVESNTMTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARY
RKEVTQGLDDTQLRQLDTRLSYLRDLYERREKVIESLKEQNKLSDDLLAR
VNAAETKNSLEEIYAPYRPKRTSKSFKAREAGLGPIAEQILNEQIEPTEA
LAGFSHEDYSDSESQLDAIQHIIIDDWAQNIALTTELKALFAKTATLKSA
VASDEKKEVGKKFRDYFEFSENLNKVPSHRLLAMLRGRQENVLGLKVDGE
DDAPIARIETEYNLDQVQPQARQDFLKQTAKLFWLGKIRPQIEHSLLTEK
RLAAEAEAMQVFAENLRHLLLSAPAGGRTTLGVDPGIRTGVKLAVVSDAG
DVLAHSTIYPFAPKEDKEGSIAELARLCREYNVDLVAIGNGTASRETEAV
IADMMAANTDLNLTRVTVSEAGASVYSASELAAAELPELDVSIRGAVSIA
RRLQDPLAELVKIDPKSIGVGQYQHDVNQTGLAKTLDAVVEDCVNAVGVD
VNTASSAILGYIAGLNKAIAQQIVEYRKENGRFDTRQSLKKVPRLGERTF
EQAAGFLRIQNGSEPLDASAVHPESYSLVEKMVEAKATTVKDIIGNSEII
RQIKADDFVDEKFGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEIAQ
LTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKP
GQIVQVRVIQVDAERKRVNLSMRPEGAEAPAKTQRPPRREQQEQRGERKP
QPKRPQAARSNDQAKKPQRAKQEKPQEQKIGGLGALLLQAGIKGSK
>ACIAD2727 putative transcriptional regulator
MEFLNDMALFVEVCKVMSFRKAADKLNMPSSTLSRRIGHLEKEIGLRLLH
RTTRKVELTEAGQVYFERCKPIVSEALLAHEQLGEMLSKPSGLLRISLPV
DFGVMILAPLLTEFAELYPEINFEIDLTPKLVDLVKQNIDVAIRMGNPPD
SNLIGHKLMQFRGQLYASADYLEKNGHPNHPSDLVHHQCLSFPNNLLWKL
NHKNETVDVKITGRFMLNSVGMMRKLSILGQGIIFTPRAIVYDDINKGLL
VPILTEWQGDFLPAYAMTETRLLPAKVRVFIDFLREKLMNFTTHS
>ACIAD0217 putative transcription regulator protein
MRKKPQQQRAIYLVDTILQATQLCIAENGLIQLTTPKIAERSGISVGSIY
QYFENKEQIVQELLLRKSEHLGQMLKQLVTTQEQLSLEEIIPRSIQFGFD
MMKADQGFFIEVLKHWHDYNHSKAAQVLEQHFFEVGLYVFNRFHREWDFE
TLKHKSFVIINSTLFSMMRYVSNNDFLIEEQQLKYELSKMIIAYLKD
>ACIAD2032 putative bifunctional protein [Includes: transcriptional regulator (GntR family) ; ATP-binding component of a transport system ]
MPMYKSDQLAHQLKSLIEKNIWKAHTKLPSLREQVESSGFSLMTVMNAYQ
KLEAQGLIYSKEKSGYFVAEQTKPALDSASTLAPKIEINSSVFKYLKSIQ
TPNLVSLGSAFPDSELLLPIKLRQIVSQLARYPKSYDQTTNLPPGNLALR
KIIAQRYCMQGIPTQADDIVITSGGLDALNLSLQALTQPGDYIVLQQTTF
YGAWQAAERLGLKVITVPEHAHCGIDVDAFEQLILHYPVKVCWMMFNAHN
PLGFTVSEEIKFKIAKLLHQHHIHLIEDDVYEELFDGLNKPLPMKYYDQN
NLVMHCSSFSKTLGAGFRVGWVYAGKYSEHIQHLQLMSTISANTLVQNAL
VEFLSSHHYEKHLRSLRLKLKKNKKRFYHYLKQNLPTQCRIHYELGGYFL
CIMLPEQASSEEIYKTLLNQNIAVAPSILFNYSQQHQQFIRINCSFDWSN
HIQSALDVLTITLKQLSNAKLET
>ACIAD1620 putative phenylacetaldoxime dehydratase.
MESAIDKHLKCPRTLSRRIHDEYEPPFAMWVARADESLQQVVMAYFGVQF
KSEQKAIALKAMQHIVQSFSLDNGPQNHDITHHTDNQGYENYIVVGYWRD
PGAYCRWFRSTEVSHWWDSDERLNDGIGYFREIVIPRADQFETLYAFKED
LPGVGAVMDDISDDIQEHGYWGSARERFPISQTDRMLANGELHIISGDPE
KGGRVLVQGHDNITLIRSGQDWVNADEKERELYFNEMLPSLQAGMDFLRD
EGQALGCYSNRFVRNVDIDGNLLDIAYDIGYWRSLDKLERWAESHPTHLR
IFTTFFKVVTGLQNLRLYHEVSVSDAKNQVFEYINCHPQTGMMRDAQMT
>ACIAD3599 putative transcriptional regulator; putative detoxification transcriptional regulator
MFDALGVRDDDSSQPFAISLTLDKLIKKAGVTPRSSLMMKYLIGELSKKS
HISVDSIRFYEKRGLLQAPQRAPNNYRYYDDQALDQLIFIRHCRELGMSL
NEIQALHQLLQHPEQQCNVIDQAIEEHLEHINQKIRQFETFKIQLEQLRE
RCQSNSTIDHCKIVQTLKEHDH
>ACIAD3169 putative transcriptional regulator (LysR family)
MELRHIRYFLVVAEEKSFTRAAARLGISQPPLSMQIKNLEDEIGTELFYR
SAQGTELTPAGKAFLVSVQPIQERIAEAVQLAQQVANGESGQLRLGFTGT
SMLNLILPKSIRLFQHQYPKIRLKLEEANSLLLMDRLLDDRLDIALVRPP
DHVPEGLHLQLLMHEPLLAVLPIGHPFAQHHSIQLNALKDDSFIVSPRAI
SAGLFDAIANACRSHGFEPKIGQNAPQIVSIVSLVAANLGVSLVPESTKQ
LGITGVKYLNINDPTPMVGLALAYRKNTHSQIVINFSSLIHSLLIQQYQG
YTA
>ACIAD3406 conserved hypothetical protein; putative transcriptional regulator (AraC family)
MRRMAAVKNYAGSVYGGLGHLLKLYCESQQFDVPDDLLAVQNLERFDYVI
WRDLLERLYARHPQIGLGLRIAEYVQPKHLGILAYIALSCESLGEALRRY
EDLHRLIYDGSPLKVELVSGYFSIHWEEPELHPTQLTDEIAIALMVQFLQ
QFLCQDAIQLHEVHFINSAPKDTQVYERYFRCRVRFSQAKTQILIPLHER
NKLVGNADHTLQQLLMQQAHALLQQLPQSSQLDQRLQQAILKGLQKNDYQ
IDQIATQLGLSVRQLQRHLQQQNMTFQQRIQQVRFMLATEYLKDPHLSLR
DIALLLCYSEQSAFQRAFKLWSGTTPQQWREQHDNH
>ACIAD3129 putative transcriptional regulator (LysR family)
MILLIMNTDDFQFFIRVADCGSLSKAAQEANISVSVASQRIQRLESTLKL
RLFYRTTRKITLTDEGRKLLDFGRYWLDDFITLKDTLTARDKPLTGNLRV
TTSATFGIKILTKVIANFALLHPTLNIYLDLNDQNIDLIEHGMDLAIRIG
KLNDSSLVAKPLMTNHRLICAAPSYLNQYGMPHSIEDLQQHRCILQQHQN
GLTDHWQLIDQKRTVVDVHLKAYFTTNSGEAIRQAALQGLGISNHSRWHV
ADDLEQGHLIELLPEYQIEPTTIYAVFPNRQFRQPKTELFLSYLQNYFKH
EYPWNIRKN
>ACIAD1519 putative sigma-54 dependent transcriptional regulator
MKTFLDNDYKVITLPDNGVPVKPIRAKAIIFSDQNSRKLLNQVETIAPSS
ASVIIQGESGTGKELIAREIHLKSDRKNKPFLAVNCGALVETLAESELFG
YEAGAFTGANKTRAGIFETADGGTLFLDEVGELPLTLQVKLLRVLQEKEV
VRVGGRKPIPINVRILSGTHVDLRKAVAENKFRLDLYYRLNVVVLNILPL
RERKGDILPLVDFFLSSYSQKLITTKPNISDRARNALLNYSWPGNIRELE
NNIHYALLVSGGKTIDLEHLRFSEETGSAVLPDNDLIQEFESILKRLFQE
YDGEAWHIIEDKIVNTAFSSCWNNQVKTAKMLGLSRNVLRNLLSRYNLLP
NKNENEIA
>ACIAD2239 putative two-component response regulator
MRILIAEDDISQAESIKSWLELDGYVVDWVDRGDYAIAAIKQHDYDCILL
DRGLPKSSGDQVLLTLRKHQSMTPVIMITARDSISDRVTGLDLGANDYLV
KPFSLEELSARIRSHIRSMQQQVDSLLCWKNIELNTQDKWVKLSGELVEL
TAKEFKVLHKMMQNPERVVTREQLESTLYAWGDEIESNAIEVFIYQLRKK
IGTNYIKTIRGLGYRMSE
>ACIAD0659 putative toluene tolerance protein Ttg2F
MIYSRMMSFYTQGCIRGLAMNSEQLTQILQEAFPESEVAVSGQAGKFDLR
IVDDQFEGKRTVARQQAVYAPLNSYIASGEVHAVTIRAMTKEEWRKASLF
GA
>ACIAD0046 putative transcriptional regulator
MLACDQTVIGRLMNPDRHQQFLIRKERILSVAERLLLENNQEITLDELVA
ELDIAKGTLYKHFKSKNELLLELVIQNERRLLEISQKHHHDFKEYAPIYM
LHHLLAPARTILLHQLEENLTMTESKLNHLFEALYEIRQERILAIKDITE
AYLKSVNYDMSIRDYLSYIWSLTYGAALLLNSSYYQRSIGSRQKLINLYV
NQALSLPAQSINLDAFEIDLKDLS
>ACIAD1283 putative transcription regulator (AsnC family)
MNDTDSQILGLLRDNARMSVTDLAAKVKVSRATIQKRIEYMENQGIITGY
TVRIKPNSEQNMIRAWMNIMVEGNKASAVIRELRIDPAVHTLHTTNGKWD
LLVELKSENLASFDKILERIRTINGIYNTETSILLSTYKA
>ACIAD0985 putative transcriptional regulator (PcaU-like)
MSVVIEEDVQEAESTKNDDRYLVPGLVRGLAILQAFNQESQEMTISEIAE
ILDVNRSSAFRLIYTLESCGYLRKATQKTYALDSKVMELGFNSLSKLSLL
DLSTPLMKELRDQTKIAVHLSILEGTHIVFVNNIQSSGPFTSTISLGTRW
PAHATVIGQLLLSNLSETEIRQRYRKFDEWDTFSELTPKNLKELLLRLNY
VKTQPSMVSWGHYNNDMAACAAPIYRQSSKDMVAVLSVSCPITTYDEYTF
KHSVAAQVIETADKISKFIY
>ACIAD3245 putative ATP-dependent RNA helicase
MKLSMSKNFADFSLHESLQQALQDLGFTSPTPVQEQAIPAALEGKDLLVS
SQTGSGKTAAFLLPTLHSLAGQDTFLPFKERMRAVTQPNILVISPTRELA
QQVSQDAIALVRHMKGVRIAAIMGGMPFAKQIQQLKGAQVVVATPGRLLD
LVNRRQIKLDKVDALIVDEADRMLDLGFSEDLEAISELAANRKQTLMFSA
TFADRIIRLAECMMQDPMRIAIETGHSTNTDITQTLHWTDGFEHKKKLLT
HWLSDESMDQAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTVRNRR
LRSIREGKAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTG
RAGRTGQAITLATYRERGKIRALEDYLEARLSVSEIEGLEPSPPPARSGR
DGGGRGRGGNGGGRRDGGRGGFGGGRRFEGESNFKRRDGGRDDRPKRSFD
DKPRGERPAFGGEDRPRREFNSDRPRREGGFEDRPKRSFGGEDRPRREFN
SDRPRREGGFEDHPKRDFGDRPARREGGFNDKPRFDSNDDNRGNRVDYKP
RREGSFGDRPKRDFGDRPAPRREGSFGDRPKRDFGDRPARREGGFGDRPQ
RSFGDDRPKRSFGGEDRPRRATQEEFFNRESGDRRRKNDR
>ACIAD0246 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPR
VIKSNGKNEPFDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGE
RDVKSRMIGEIVMQALFALDHVAYVRFASVYQDFQDVEAFRRQIEQMQQR
EQECEKHDV
>ACIAD2511 putative transcriptional regulator (LysR family)
MIRMTPMTLKQLKAFLVLARNLNYANASAELHLSQSALSLSIKSLEEELG
GKLFKRNTRRVELTNEGQSLIPLARKLLANWEDMEKDVKQRFKLNRGTLS
IASMPFVTHAILPEVIKIFSSEHPNLSFSIHDIPNERIIENVLDGIFELG
LCFQPVLHEQLEFKPLFDEDFLALLPKSHPLAQQKTVQWPELYANPFVTL
QHPSIVRYLLEQNAQQHDLILDLKVECHQISSLSSLVALGIGVSAIPRHF
QHFVDKEHNVLLEIENSEVHQAVGIVYKKDFELSNISVQFMQALTRFPYD
SILKNQ
>ACIAD2932 conserved hypothetical protein; putative transcriptional regulator
MNSILAYNVYSQFCPARHFFEKMADKWVLLILNVLGREPLHFNLLKKRIE
GISPKVLSQKLKILERDGFIKREIQQTSPIRVEYSLTDLGHDVSQTAFKL
KEWAESNIEIVLKAQHQYDAIMSINS
>ACIAD2778 putative transcriptional regulator (AraC family)
MSGAFKMSIYIDSHKVVLKQVGDIFLDSCSPLPNHHLNHFNPSDGNGYSE
IYDFGKLCVGKGKYWIDHPLQMSAETPAHSFGITILLSGTHHIQNHKSNH
KYEIRSPMIILRKGSLGLQTIHLQEHKEMSLISLDFNQSFLEIMESNSLN
SDFANFFLSEPSTALKTINIPNKNVLHQAHYLLNIPSAQSSIDLLHLEGA
ALELMSLLLGNNQKSNEIPSSVQRTIFILENEFEKKITIRTLAKQVGINE
CDLKKIFKEYTGKTIGHYLLENRMRCAQILLKEGVSIEKVANQIGYSSTQ
YFKKIYERYFSYSC
>ACIAD2393 hypothetical protein
MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYL
AKAFNCSVSQIFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKH
LIFTLIDTKK
>ACIAD2012 putative transcriptional regulator (AraC family)
MTAYDLKLKCVCDYIQQHLDETLSLQQLSEVAGLSRFHFHRIFYAHLGMN
IMKYTQMLRLKRASFQLVFKPEVKVIEIALDAGFDSPEAFARAFKRSFDQ
TPSAFRVEPNWQNWHRKFVYFTPESELKMNVTIIERPVEKIAYISHQGSP
EKVFETAAKFIEWRKRTGLSPVKTSATYGIPFSDPEQTPEKEFRFDIAGS
ITKSIDQNNEGIEMSEIPAGRYAMVRHWGSHDYIRDSVYFLFRNWLPAQQ
EEAGDYPVFFHYHNFVHEVKEADLVTDIYLLLK
>ACIAD2379 putative acetyltransferase
MENYMIVRRATVEDLNQLAVLFDEYRQFYGASSNLKQSYDFLKQRFENKE
SVIFIHVKDDVFTGFVLLYLGFSSVACSTYYILDDVYVTPVYRRQGSAIQ
LIDTAILFARHENALRISLETQKNNIESMRLYQKMGFVLDEEFQTYHCFL
K
>ACIAD2740 putative transcriptional regulator (TetR/AcrR family)
MTTHQVKKSEAKRQHILDSGFHLVLRKGFVGVGLQEILKTSGVPKGSFYH
YFESKEAFGCELLKHYISDYQIRLNQLWTTETSARDKLMNYLQCWVKDPA
TEQSWAESCLIVKMAAEVADLSEDMRLIMNDGVKRLIARMADLIRIGQQE
GSIQTSVVPDVLAQVIYQMYLGAALLSKLYKHKAPLFQALESTKMMLDGC
NHVQQDKNQ
>ACIAD1294 putative transcriptional regulator (GbuR)
MDLQHFPDLKLLRIFETVVKNQGFANSQQELNLSTSAISTYMSQLESNVG
MKLCERGRGGFSLTYKGELYYQETVKLLQEIDKFALYSAQVKGELNGILK
IGILDSIVTEKHFPIDQIIGQFSQENPYIYIQLQVHSPYELQMGVLENCY
DLAVGAFFLKMNGITYHPLHKEQHWLFCSDKHHLFEQRHLTENMITQEKM
VRRGYWSHSELAKHGFNNSSASVESMEAQLILILSGQYIGYLPEHFAQSW
VDQKRLKVLLPSTFGYQAPFSLIMRRGRSKDPIIQKFRNIMSKYI
>ACIAD3651 putative transcriptional regulator
MHILQQFQITIMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDH
LEHVYSVRLFQRNTRKISLTPYGEKALHYCENILQQHNLLHDLAAHEQQS
GVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQFDLSLTENALDLIDGNIDL
ALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPSQLMQHQCIT
HQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTL
MVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHL
GNDLNPSI
>ACIAD0323 putative transcriptional regulator (LysR family)
MSLIQNIELKWLYDLITLEKYRNFTMAADMRNISQSSLSRRIQTLENTLG
FEVFNREMSPLQLTEKGKLFVLHARSFLDDFEYNIDKIKGTDNIRSKVTI
ASAHSLAGYIFPKILGNLKNYQEKIFHVEAINVNETVDHLRNGKCDFIAS
FYDDELMNPQFLCHKIFSAKLYLVTAPNHLGRPKFSLEDRSLPLMNYTDD
SYMGKKVNKFLQDSQSEYFNITFVSSMSILLKDMIKGGFGIGWLPDYSIQ
EELKNNELMIIPLKDSVLSVDIYLYRSSSRLNAASEGLWNFIKAIDWT
>ACIAD1634 putative two-component system sensor protein (ColR-like)
MGQHFILIVEDHFELAATVCEFLETHGYVVDHARNLDAARTRLKSQPYHL
LLLDINLPDGSGYSLCDWLRVEQGLDLPVLMLTARDTVGDKLKGFSAGAD
DYLVKPFDFNELVARIRALIKRASGEVSNTQLKIHDLVLDTSTQTLTRMG
QTIELPPIQFKLLKILMRHSPKVITKQELIMELWGEEEPESDALRSHIYN
LRKMIDKPFQQKLLHTVSGVGLKIALDS
>ACIAD1822 putative transcriptional regulator
MQSSQVKSAMRALEIMEFFRAVKQPRSMSEISIALGYPQSSTTVLLKTLI
SLGYLNFNRKERLYFPTLKVSALGDWIANSLFSSRDILEVLQDIHMETGE
TVAIATKNDIYLQYIQIIESVHALRFHVDENAIRPLTMSSNGWMLMSTMN
DKAIDNTVRRANTITQKDGIRFEVDDMMARIRQVREQGYASAEHIPFVGG
GTICVLLPMTIQGQPVTMGLGGALDRIKQNYDRYLELLLNGVQQLKKSDS
FHQPIELAH
>ACIAD1367 putative transcriptional regulator
MSKTVLSSLCPTGCELPLTRRGHERWLALLNSATELFLEKGYDAVSLDDV
VNYAGGSKASIYKYFGSKEGLFTSICDYRRELFFKNICVSFDSERDDLRN
FLIHTLIGFYQKITCDENAAFMRLIIEQSQRNPDLALYLHQKGPEHVQKT
IAHALEQATLLGKIQCQKPYNSAMMFFGILRNIEWKILMGVPTTIDNDEV
VEHIEYCVDLFLNAHKVS
>ACIAD1656 putative transcriptional regulator
MQRKTIMFTDLDDFYCFALVVEHGGFSAAERATDIPKSKLSRRVYNLEER
LGVRLIQRSSRHFAVTDIGMNIYRHAQVMMNAAQAAHDLVDHLSIKPRGV
IKVSVPVDIAQNQMSKLLPEFLKLYPEIRVQLMISNRRVDIVNEGIDIAL
RVRSKLDDDPSLVLRQFAQIEQHLFASQAYLNEFGSVKIPDDLPQHRFLS
LSDDHLDQQFTLYDQNNQLHKVKVNPVVMASNLLMLAQLASQNCGIALLP
DTIACDYIKSGELVRVLPEWKAPHGIFHAVYPSRRGLLPAVRVFIDFLVE
HLTER
>ACIAD3615 putative transcriptional regulator; putative transcriptional activator
MKSTVEELIAFITIVDTGSIVGAAEQLQQTPSGVSRSLNRLEKKLNVTLL
ERTTRKIKLTQEGSLFLMRARTILADLSDAEEALLKSDSDTSGLIRIDSA
TPFVLHVLAPLMQKFMQLYPHIEIELNSNDQVIDLLQHKTDVAIRFGALH
DSSLHARLICKSRLYIVASPDYLKKAGTPSHPQELFQHQLVGFSKPVYLN
TWPLKIEDEYITVHPQIKASSGETVRQLTLRGHGIARLSEYEIWQDLQAG
SLIALFEDQIEIQLQHIHAVYYQQKHLPKRVRLFIDFLADELSQQFSTTQ
AL
>ACIAD2793 putative transcriptional regulator
MTTHRRRPKHDPKESEQEILNAAKQFLNERPFRELTVDEVMRRTGLKRPA
FYVHFRDKHDLALRLVQAIGQELFGIADRWLEGDNPQEDLRRALVGLVEV
YMKHSHVLRAFAEAASGDERVNSIYRAFVQEFISAAAQHIREEQATGQIQ
KDIDIDETARALIWLEERYLSDVFGRMPPADPEVVIRVLQNIWISTLYGS
N
>ACIAD2994 putative acetyl transferase
MVIDQEIRVGSWQMLQADARFIREQVFILEQHIPESEEWDLEDDRSLHFI
VFDANQAIATARLLQNHSIGRVAVLKAYRGQGIGLALMKFIIDHAKKLKL
PFLILSAQIHAIGFYEVLGFSLQGEEYLDCGIPHIEMYLNLDSSSNHDEE
C
>ACIAD2825 fragment of transcription elongation factor (GreB-like)
MNRNTESIVCFMIGLQDHYNKKLREIDCKIRYLTKLFEVAHKVKSSPEQD
EKAYFGV
>ACIAD0862 conserved hypothetical protein
MTIDQSSALSLEDIHHEVLLQIEAILFASDVPISLARLKEAFQNQYNKQQ
LRHFLQQLAVLQHGRSIELIETAQGFRFQVRSKYRNMIAQVWPERPTKLS
PSLLETIAVIAYHQPVTRADIEQIRGVSNNSQILRMLFEWNWIKESGFRD
LPGRPALLITTPQFLNAFGLVSLGQLPPLQDAKDAFMSLDVNTPKS
>ACIAD1675 putative transcriptional regulator (LysR family)
MDIKSLKIFVQIIQSQSFTLAAEQLFVTQPTVSKAIAGLEEELGTTLFKK
GEAGRKREVELTYTGQQVYQHALNILDEQKKIYEVLDDIKHLKRGKLTLG
LPPLGSVLLTSLIAIFHKQHPNIELKFLEVGSNTIEQAILAKTIDVGILL
NHIHPLLAVIPIIDSPLCLLSPRHSRWKHAKGITLNDLKDEQFLLYDDSF
TLNHLIIQAANLEGFEPHIVCKSSQWDFIAKLVESAMGIALLPQIYCEQL
DQDKFSITPLINTPLRWTLSMAWNTSVPMTAATRAWLAIVEQYRHEIKF
>ACIAD0935 putative RNA polymerase sigma factor
MSSASAHHKKDLLDQVNNPVFLQDLRQQMIKFAVLQLASLPHAEDVVQDA
LASAFQHLDSFTGRAAFKTWVFAILKNKIIDLIRQKSRLVSMSELFKDEE
SELSIDALFDASGHWHKYEAPQAWLSPEEMMEQQDFWIIFDACLNHLPAK
YAQVFMLREVIELNSSEICEKLELTVSHFNVLMYRSRTRLRECLENKWLL
QEDCSC
>ACIAD3629 putative transcriptional regulator
MRFDFVDLRLFLHVVETGSFTQGAQHSALSLQAASERIRKLENGFGTQLF
TRHRTGVELTCAGQRFLEHARLLLQQSQSLEQDMNHFRQTPQHTIHLWCN
SSAQSEYLPTLLPQYLAQCPSFNIELHEAESSEIIQALEQGRAELGLISS
FSQTEYLQTQEFVHDPLVLICPVNHGFTSSIPLSLSDIFSDSMIGLSSHH
SLQRSIDIQARALGVQIQYRIRLPNFNAIAEVVAAGSGVAIMPARAAARL
KASYDLAIIPLKGAWANRKLLVVARDFSQLSTPYQSFTEFLIQHRPVTNG
S
>ACIAD0194 putative transcriptional regulator (AraC family)
MTMISPIKMNMPTDDLTRLIELHEFFFHPHDRVQPHSSLWGDFNFSLNGI
LQIQVDDSTYLAPPNYGLWLPPKTSHYCVSIDQVTHFVCIRLHPKLCQLF
SANPKTLEIRPFFHALVKELLDQSSRTDQVTYHHLLQVLFDQMQQARCYD
HYLPYTLHAVLKPVLLDLSNATLFHLSLQQILAKSDISERHALRLGQQEL
NMTLSEWRNRAKIVHAIAQIRQGLSIKRIALELGYQHSSSFIEFFKRYTG
QTPLQLKDS
>ACIAD2338 putative transcriptional regulator
MKRSILGLMYLIQGMRNAGIDVDDRLASIGIRLDALDPSSIIHDSLEWDI
QYIIGKDVDPEKGLFIGQHYALAGYGPLLMLLVTSDSIQTAIYKGIKYQK
LTHLSGELDLHTTPSKTNLVYRPVDLQSSIGLLRAQCEVSGTYKFIQDIY
KMMGLIAPEIRVELPFEMPKQEDVLQQYYQYYGQNLHFGNNVATFSLNVD
LLDVKIPSSDIITHRVYEAKCQLEVDRLNAEDIKMPIIVQQVRDYLELQQ
GVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALELMEYK
EYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQYGR
>ACIAD1811 putative transcriptional regulator (MarR/EmrR family)
MQKINIDRHATAQINMLANKLMLKSSTAYTQKFGIGMTEWRIISVLSSAS
DCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEM
GQELYEVASDFAIEREKQLLEEFEEAEKDQLFILLKKLRNKVDQM
>ACIAD1729 putative transcriptional regulator (TetR/AcrR family)
MFGFKEYPLSTRKPRQTRAKVTVDTIIEAGFISVALHGMSGTTTRHIADI
AGVSVGSLYEYFKNKEEIYDAMAASFVQEILKMIKDLTPVIMDMELESVI
EIIFYNFRDLLTRNNERYLICLRHANELRYDKYINQIERELMNIVMKYMM
HNPKYLKVNNLAVTAYVSINSGIFNIARHLILPNPYISFDELVDGLKTMI
MSYINAELKKAEQ
>ACIAD1887 putative transcriptional regulator (LysR family)
MNNIHNSNNQDNHLDLGLFHRIDINLYPLFVAIFEQKSISKTAISLSISQ
SAASHALQRLRLQLDDEIFVRHGNKMLPTPFAQRIYPAIKSALLSIQNIN
LQKYTFDPSLIQSLKIAIHDEIEPIIFPKIIRHFQEIAPDIQFASIKLDR
KKIEHDLATQQLDFVIDIKHDLNKAIGFDFLVCDHYVVCTQQTDLSQESY
LAASHIGVSSRRAGVLFEDIYLNKNNISRHVFLRCQNYSTALQILEQNPT
AMLTIPNSILSHLSYSNALNVYQLPFDFPEINIGIFSFAHLSRNLRYDFL
KKEIIALFA
>ACIAD2170 conserved hypothetical protein; putative phage anti-repressor protein
MNTLIDIGSSGLIPVIDGDIGGEVQPCVDARTLHKWLKNGDMFANWIKSR
IKTYGFIENEDFALILENTKIKKGRGGNRRSVDYLLTLDVAKELSMVENN
EQGRIARRYFINCEKVLRQAVFGLMDQFNKASIEFDKFSEIASSAGRTLS
IVGKQYKPQAKQKVEELKTKVQPHLTHLELHND
>ACIAD1581 putative transcriptional regulator (TetR family)
MSPENPFLNHEKKEQERQAKRDAVLLAAVKIFNEQGFHSTSLDDVAKSLG
ISKPTIYHYLGNKEQVLLTCVEIGLQQLIEAAKDVEKQSISGFEKLRRFL
FLYGCRNLDDFGRCVILTHDDALSKEGLVKFKALKRVVHEALLNIIRDAQ
LDQSINAEHDPKILAATLTGAINWSAKWYNPNGVLSKEETIQKMVDILTY
GFEKK
>ACIAD0202 putative transcriptional regulator (LysR family)
MINPANKWEALDAHLLQVLYVLLTEKSVSNAAKRLNQSQPAISTALKKLR
DITGDQLLVRSRNGMTPTERGESLLEPVRQALAQIELIATQQVHFNPAES
RQVFNIAAPDYLNAIALGEVLRRVRQEAPHCTVIMHSMAHDVDYTHALES
GTYDAVIGNWPQPPEYLRLAPLFEDEVVCLMRKSHPLAARPLTLEDYLQA
DHIVPTPYIVGQRGVIDLYLAKERIKRNIVAYVPYFGMIPYMLLQFDAIF
SAPRSFSRHYSALLPLKVVDAPIKFPKISYFLLWHERLHRSQEHRWFRDL
VISVLRNDGYVSLNQ
>ACIAD3225 putative transcriptional regulator
MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFD
RSEKKIKLTTAGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSS
SVILNQDKLKLFKQLCIEYQIEIEIETLASELQVEAIENGSLDIGFIRPP
VLASLEHLNHQTVYSSKLCVAVCMEQPALNQQKVKLSDLKDIPFVSMPHS
DRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGICIVPQDFE
SVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSKA
>ACIAD3469 putative two-component response regulator
MNILIVDDHPLFRHALIQAVRYSLPQAQIHETAAVNELYQRLESGAEPDL
VMLDLNLPGASGFSALVHVRAQYPSLPIIVVSAHEEVSVIQRAIAHGAMG
YIPKSAHPSHIGEAIRHVLEGEIWLPPNLPNNLSFDPRASDETELAERIQ
SLTPQQFRVLMMVAEGLLNKQIAYELDVSEATIKAHVTAIFRKLGVQNRT
QAVLAISALNIEEKKL
>ACIAD0504 putative transcriptional regulator (TetR-family)
MSVSKVLKTKDRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFR
NKQEIIKELMEHYQKETLEMLALPEDRLLNANDKIRYFQVLSGQLWQYRF
LHRDVYHLVENNDDFKKIYPKFAGQVMQQGQKIYQAFVDAGLMKMTTSEI
EALIINLWIVLTNWTNFLYMSGHISDSNHLEEKWVWQALRQMVFLEGPYL
MGESRETYERLLESFGQSELFASLSLKSE
>ACIAD2678 putative transcriptional regulator
MLSLSQEMDLNHYSSQADFAHHLMSSICGEHRLETSCRDKLDFHYEGIRL
PHKRLAMGKISYGAHVCINTSNLRAYSISLPVQGKQVLNVRGAEYISNCD
KGLILSNNELQDLVIDKDCIKYQVVIPEHSMQQVLGELLHQPLDYPVLFN
PEMNLNVDSSLFVWWKNIDNFLNLRAQFKGVQGMQLWSEDYENFLIKALL
LSQENNYSGMLRALCNQYEPEYLRKICEFIRQHAHENICADDLHRIAGVS
KTKLYQEFQHYYGTSPLAFLRKYRLQQIYKILKSSSNKKLSISKLAYDWG
FNHLGRFSQEYRDEFGETPTETKHKIKWENTNN
>ACIAD1610 putative transcriptional regulator (AraC family)
MDLLSHSNKGTISIALVNEALQGAYTTGLDVEKIVKAVGISPELLAFPKA
RVTIDQYARLWIELADVLNDEFFAMDSHPMRRGSYRLLAKLAMQSETLEK
ALQDILHYFSNILDDIHPQLKIDNHQAYIVLQDRQHPKRMFVYATLIMLI
HGLLCWLSDQRISIDHIKIKSVKPIYPQDYYIRFCEKIEFSSDENLIAIN
SACLKLKIKKNKNDLINFLKHTPHNLLVRYKNEDALGLLIRRHLIRHHPS
EWPELKQLSHELHMSEATLQRRLKAENMSYQALKNEIRCDIAIEQLINTK
HTLNEISEALDFHDPSAFHRAFKKWMGMSPSAYRKAYFQHKIPPVSA
>ACIAD2920 putative transcriptional regulator
MKEITMSELARQTGLKSSAIRYYEKEKLIHPIGRKGLQRVFSIQIIDQLA
LIHLAKQAGFSIQEIRSMLEKPQSPIDKNQLKQKALQIEEKIVEMKVLSK
TLRHVAQCSFDNPLNCPKFQKILSAVKRECLTNPPFIEKNISKKSS
>ACIAD1659 putative transcriptional regulator (LysR family); putative glycine cleavage system transcriptional activator (Gcv operon activator)(GcvA)
MRRMIPSIQSLICFESAAKHKSYTDAAQELSITQSAVSRQIQQLEDFLDI
ELFSRTRHGVELTQAGEQYYKNIKPLLLGIEHSTLDLMSHKGLGGTLKLG
VIPTFATRWLLPRLYRFNEIYPEITIHLETSTKPFLFSDHIFDAAIYAGT
PSQIENWPGAKIQFLMQEEVVPVCSPTLIKRHFPDITLKQNQTISLSPEQ
ISQLPLLQQTTRPYIWKEWFTCMGYEYPYAMEGQRHELFSMLAVAATHHL
GVALIPQMLLEKELLNRELIVISSLKLVGTRSYYFVYSEQNNNILIQKFI
DWLEQEVKNFQNQVV
>ACIAD1864 putative transcriptional regulator (TetR family)
MSKKDDIINTALRLFNSNSYNSVGIDRIILESGVAKMTFYKYFPSKAKLI
EECLNQRNMNLQESLTASLEACDPNSPLDRIKAIYMWYSAWFHTDDFNGC
MFQKAVEEIFKIYPSTIKPAIEYKEWLTERILELLDQMKIKNPEHLATLL
VSILDGMTMHAQIDKHSVNINEYWSRVERLIKFELPKD
>ACIAD2522 putative transcriptional regulator
MNFKSIENFYWVARLNSFNKAAVKLNTTQPAVSQRLNSFEQELGVKLLER
TSRSLQLTDKGKVVYEYAEKYIQLNQDLLKALSENKAIQATIRLGVAETI
VHTWLVDFIEQVQLEFPQVTIDIVINITPVLKQAVQSGELDMAFLLESGC
DFDCIELPLCEFQHSFLIAPRFHKRFMSRQLSLKDISQTTILTYPKTTYP
YVDLKKQLTLHQFKEPKTITSYSLATLIKMTEEGMGIGIIPHLSVIHELR
ERRLQILPAELTLKPFRFSCIYVAGKDDLVKQQLSKMAYQIAQQSLRKLN
NQFDGDHYV
>ACIAD0154 putative transcriptional regulator
MRHRSSHHQPEQDLQHREHHHSGRRGRLFEAGRMKLLVLHLIQQSPKHGY
EIIKEISDLVGDGYTPSAGTIYPTLTNLEEMNFISLQDAERKQYQVTQLG
EAYMQEQQGKLDELLEKLRLRREIHNNDQLIEIHRAMENLKTALRLKLNT
ADLQQEQIYQIAEKIDQAAIAIGRL
>ACIAD0746 putative transcriptional regulator (LysR family)
MRMTLRQLAVFVAVAQEGTVTKASDAVRLTQSAASMALADLEDGLGAPLF
DRLGKRLQLNDLGRFLLPQALEILGRCEAFEQAAKGELQSIDLRLGATLT
ISDYLIPDLMADFLQIHPQAHLQLQVGNTRQMIEAVNQFQLDLALIEGSC
HLPQLQCIHWRNDELAVCCAPDHPLAKLGRPLTAQDFLNVEWILREEGSG
TREVFDNAILQDVPDANIRLTLGHNEAILKIVAGGLGMSCISRLAIEPLI
EKGQLVILETPFWELTRPLHLLVHRQKYQGPGLKAFMNFCENRVN
>ACIAD1469 putative RNA polymerase sigma factor (iron regulated)
MRQKLGNTDQAADLVQDTFIKLLQTRDELFGIKEPRAYLTSIAKNLLIDQ
VRRKRIEQAYLDGLSQMKYMLDAVASPEDQMQIIQAINQLCKALEGVSEK
AQQAFILHYLEGYTHKEIAERLNVSTKMIQKYLASCLIQCYQNRQDMDAC
I
>ACIAD1230 putative transcriptional regulator
MLDQLRAMGVFACVVEKSSFSGAARNLGITTSAVSQQIRSLEQEMDVTLL
HRSTRKLSLTEAGQAFFHSCQEMLAAAERGKIRINELRDDLIGDLRIATT
PELGALHVVPALSHWMSAHRGLSVHFEADHRYIDLIEGRIDIAIRMSPRI
DDQSLNAIPMVRVDQILVASPSYLNQSAPISRPEDLMNHDLIPVNLMSGY
QHLSFQHLSTGESIDIEMKNRLQTNNVFIAKSLCQHGHGVARILYLDVQK
ELINGSLVEVLPEWNLPAFTLYALTQKREQQPMKIHRCLDALKQYFSQLP
GGRNLQEVS
>ACIAD1044 putative cold shock protein
MKSEFYQGKIKQYDATKGFGFIGGLEQDVFFHISDFPLEEGEPKRNERVK
FMVVENNGKFKAVKIQRVVDQSAKAKKSRAVENNTSITSALLSNFKK
>ACIAD3447 putative transcriptional regulator (GntR family)
MRSLLGDHLLQRLQQDVEGKLHQRLFRCLRGAIIEGVIQPKTRLPASRDL
AKEIHVSRNTVLSAYEQLQAEGYLEARTGHGTWVAEQLPEAFLNTPHGKQ
LVGLRNPPRSYTLSQRGSQLMGYAAASPHQWGPFVPGAPDVTEFPHHIFS
RIQARLSREPEISHLIYSNAGGCAELRSALADYLRVARSVQCDPDQILIT
EGVHQAIDLVSRALCDIGDQVWIEDPAYWGMRNTLRINGLQIQPMPVDAD
GIIPQQYPEHPPKLIFVTPSHQYPLGSHLSLERRKSLLNIAKRHGSWIVE
DDYDSEFRFSGQPYPSLQGLETDAPVIYMGTFSKTIYPALRIGYLVVPKP
LFSPLRILAAELYRGGHLLEQKALAEFIREGHYQAHIRRMRLLYGKRRAY
LVDLIHRYLGPEFVHQYNDDSGLHLVLKLPDFCDDVAIATSALERGIKVR
PLSQYYMHAHANAERGLLMGFACVTEKDMVMAFGILLQCLREANVQTRS
>ACIAD1802 putative transcriptional regulator
MGTSMNKGTQNQDRQQVLIDLYQQYLLSEITLGQLLTHLRKNILGLSQEQ
YATLVGISRRTLTDIEQDKGKLTQSVLDKVFKPLGLKAGLVPTHQHIVRK
IIKSVDDKA
>ACIAD2523 putative transcriptional regulator
MPTKLITQPTSPRYQTIYEIIKTAITKNHLNYGTVLLEAPLAKLFNTSRV
PVRQALQLLCEKQLITRFEGRGYLVNPNQQQIPPLRVSITREMLGTDQHR
LLDTRLLSEKIYDQLHMTISNIILYGHYRLDEHIIADFFNVSRSVVREAL
KSLHIQGLIEKEPYGEWLAGPLTAKSVNENYEIRSVLEPVALKKNIVKLS
VAELTEMSSRITQVQHHPDQINFQLIQQIEKDLHQTICNVSTFNEKMGNI
LIHAQSSILISQLLHQAIHVNDYHLMLNEHAQVFEALFYGSVNDAAQALE
KHIQSAQKRSVDYLKVFSIIPEPHIAPYLERLT
>ACIAD0974 putative acetyltransferase
MNTALLQVVPVTQEDYSQWYTYWLGYQNFYKVILTEEITQTTWQRFFDDS
EPVFCAVAKKGEQVLGFVHYVFHRSTWAPHYYCYLEDLYVSPDCRGQHIG
KSLIEYVQQQAKTQHATRLYWHTQENNLTAQKLYNWVAEKSEMIQYRMPI
H
>ACIAD1576 putative transcriptional regulator (AraC family)
MQGLALRNEDVVSQTLGCRPEVSYVNKQSDWQMMRWRQFVGHYNLDALPE
PMLVAHIGGKQQVHMRDGQCWSHTGSKPSDMTNMPAHVASGWLVNGELDV
VTLTLPRAIRDFVTDVRFAYRDTLGIALIRQMLASLYEPQSVERDQYIDL
LMTTFVAHLNRADTQLTDQIPITSCSAHRLHHILNMIREHPEQEFSLDIL
ASEIDLTPAHFCRMFREATGITPHQYILKCRLQRAEHLLNNSDLSISMVA
EASGFNSQSHFTRLFLKKMGKNPSDLRRRLH
>ACIAD3452 putative transcriptional activator (TenA family)
MSFSQDLWNNNIDLYQKILDLPFNQELAKGTLPEAAFCHYVIQDAHYLLA
YGRTLAVAAAKAFEADDVMQFSEAAKIAIVVERSLHNDFMQVFGISKHTF
ETTPLTLACHHYTSFLTATAWSESYPVVLAALLPCFWIYAEVGHDIVSKS
VNNNPYQAWIDTYSGEEFHTAVRNVIATVDKVAARCDDDTKAKMHAAYSM
GAKLEWLFWDSAYHQRQWLGLSD
>ACIAD2190 putative prophage transcriptional repressor
MLGFPNRLGKIMKTLAERLKYAMEILPPKKIKGVELARVVGVKPPSVSDW
LSGKSRSMEGENLLRAAKFLDVNPVWLATGTGKPKTTTEDGSNLFLIEEP
NSVEIPNQDIRQLVDSLLLLDSKGRLSPELIKAIRATIDISINSLNN
>ACIAD3044 hypothetical protein
MKVLVEGIEQGSIEIELGLLPRLGESVRIFYGPDAEIEGLVEGVHHVINQ
HDGGHHVIIKIKPTF
>ACIAD2986 putative transcriptional regulator (AraC family) (AdiY)
MQVNIKETDGLNVNRDTISIHFVNAALTGVKRLGMDVETLLSHVGIEAEL
LRQPKARISPEQYTRFIKMLWMVTQDEHVGFDIQPRRLGTFAIMCQLIIH
AKTLGQALELSSQFYKLFGDEWSVTLERDKHEARLVPLIPKTLDPDHFIT
ESMLMIWHGLASWLIERRLPLERVHFSYPRPAHADEYDALFFAPVMQFDA
PRTEITFAADYLDLPLRQDEQTLEEFLKAAPAQLLIKFKNTNSLTSRIRE
VLKSQIGEEMPTLNDVASMLYLSPQTLRRRLAAEGKSYQGVKDALRRDAA
IHLLLNPDLTLEDVAQQVGFSETSTFHRAFKKWTGVTPGLYRQLHGYH
>ACIAD3326 putative bifunctional protein (SpoT) [Includes: guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; (p)ppGpp synthetase II]
MPGEEVSQAKQQLKLIIDAYLSESDVDNVLAACDFADLAHSGITRKSGEP
YILHPIAVSCILAHMRLDAETLMAALLHDVIEDTEHTKDEIGERFGEVVA
DLVDGVTKLTHSSDKQYNKAASFRKILQATLQDPRVIIIKLADRYHNMTT
LDALRPDKRARIAQETFDIFVPMARIVGMNEMGDNLELLCYQNLDLDMYN
NVQEALLETKPRRCEYQTKWEHHLGELLTTYHIHGRVKKKNNNIELLRHF
VKNEIDLQELTHSHAFEIILNSISDCDRLVDALKENFQILHFEDHIRRPL
PGGNQSIMMKLKGEQTTLSLTIQTELMRKAARFGVVLGENAPQACRSAIQ
ASMQNLTTLIDGECAKTTFNDLLDYLHQEKIWVYTPHGHLHELPQGATVI
DFAYSASLFLGNHAVGAKIDGEIRPLSTPLVSGQVIDVITDVLATPNPDW
LSFINTQKARRAIQNMLRDQDIEEQLLVGQQALNRALKLFNRSMHDLSES
DWLNVLQWRHVENKEALFEQIAVGDLLPQLVANHLYAQDTSDKTGHAPDR
LIQGTEGVDVKYAHCCNPILGDPIQGHLSRRGLIVHRARCHNLLHEQHLH
PENIMPLQWTSDDLDDVSFTAYLCIDMPLDGEQISELIYLCRKSHTGVEM
VQPHGDHTYVNIVVNNRKVVAQIIRDLRMLFGFPRVSRLFTPAAVTESVK
IKVS
>ACIAD3490 putative transcriptional regulator
MLNRISLRQIQYFVATAESGSIIIASEKIHVSSPSISAAIAHIESELQAQ
LFIRQHAKGLILTDIGEKVMQECKVLLSQADNLYALVADFSGSVRGPLKL
GCFTAFAPMIHAEVIQGFCNLYKNVTLNVSEDDQMVLMNRLIRNELDVAL
TYDLNLDDDLINFESLAILPPHVLVSESHPLAQNSAVTLEELTELPMVLL
DMPYSNDYFISLFRKYKLSPKVTHSSRHVDVVRSMVANNLGYTILNVRPK
NNYSLDGKRLVRLRIAGSHRPMHIGLATAKNATLNTVAQAFISRCRAFIS
NHYISGMTDAHFFDPHIKSHALDVQEPE
>ACIAD1638 putative transcription regulator protein
MMDINQHLSQRIKQLRLERGYTLDELANRSHVSRAMISMIERATTNPTAV
VLEKLAVALDITLVSLFNIQTSDLKTQPYTRYSEQPVWTDPESGYTRRVI
SPLGVESPIQLIEVDFPAFAKVTFETPIRHSVQKQQIWIISGCMTILVAG
CTFHLSTGDCLAMDLEGPIIFSNPHPTSTRYILAIANPSA
>ACIAD0641 putative transcriptional regulator
MPFFIQIATYLFCGVTMSVKIIVGYLRLLQRVRQHYHLEHLSQQKAWADY
WLQFSQALDQELEQGFDLHVYTQLLKQVQSTLSRPVSLVLAEHATLQDVG
LIGYLASTSLNLQQALSLLEQYYPLIFKQTNLEQLKIVEQQDLIQISWGA
LYEDYREMYELNQALIFKIAQAIIQQHLIPPVFIQLGHVPNFSISYYAQF
YGCDVTIREGQYCIGFSKQILRARSFAADQHLNQMLSSQAKQSLQHADTF
EHRQQQFKQKVMGLIEQGLRHQNEVIQHYVAKQLHASERTLQRQLKQYQL
NFQDILDEFRLQQSQLYLKQGRALTEIAELLGYADQSAFGRAFKRWTGRT
PKNYRADLHQD
>ACIAD1838 putative transcriptional regulator (AraC family)
MGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFL
GLMLLLDLSMISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTL
LDEPILLSQLSPIIQQEIMIRLLAGVNGVYLRQLIRVGSVSERVAKVVNW
LKQNFVETIRLDELADRFYMSSATLRQHFREVTGMSPLQYQKHLRLQQAR
HLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKDKQAAQLS
>ACIAD1745 putative transcriptional regulator (LysR family)
MSLEIRWIEDLLTLEQERSFSKAAERRFVSQSAFTRRIQQLEQSLGYPIL
ERNSRYMEFTDAGQILLTTAKSIEQQLNATLALLNNLNRANEVTIKFAVV
HSLSSTFFSKFLKLFPEYIKDFKIELVAANVGEGFKLLKEGACDFLICYS
DESKLKLINHEVLSYLKLGETEIIPVTLIDEDGNAKYDLNQRFPLLSYSK
NAYLRNLVDQVIVNRLDYRILYETDHANNLKDFVLQGAGIAWLPKITIEE
DLLRKRLKIINAREFIIKQQIFIFKNKLRKDDYLKIFWDSLRNIEY
>ACIAD2672 putative transcriptional regulator
MLATFQSGHLVDTVVMFSVSQPKGICMSQVNPAMELNGRHLQQCSIFSSQ
NLVFQHQDLGETCKSVGQIFKPHLLKIVQQRNDFYSSMHHLKAGRLSISR
LEYGADVYIEPDHLEKFYLIQIPMQGYAEIEINRQKFISYTQVASLISPD
QSLKMRWHANSPQLILKIDKEDLLQHCRQHLPDAPHHLPLFEPKLDFSTQ
GGAYFLQLMRTLIDALGCEQHPLHHPMAFKQFESSLFNALIYGQQNTLLE
RIKQAKEQAISPYFIKRTEAFMRENLHASLTIEQLAEHAGVSVRTLFAGF
KSFLNTTPMAYLKELRFEQAHTELLRNEDVSVTDVAFKWGFTHLGRFSQE
YKRRYGELPSCTRRATIEHQDMGLRAYS
>ACIAD1206 putative transcriptional regulator (tetR family)
MAPSSLSQSFDHAAQTPEIFEKVPSRTVGRKATITKEELFQAALNLIGPE
KSISSLSLREVAREAGIAPNSFYRHFRDIDELAIDLINRAGLVLRHIIRE
SRLQASKQNSIIRSSVEVFIQQLDADEGNLSLLLREAYTGSKSYKEAVER
QLNFFQQELQEDLIRLERLNHSRLSHPDLVARAITQLVFTMGAKVLDLPI
NQRTAVAEQTMIMIRMILEGARHLDESKIR
>ACIAD2627 putative RNA polymerase sigma factor
MTGFSISMDLAPKQSRSDRSTHEGTVEQRLKFFMQDVTGRALVMMESATQ
GQHGIAMDLVQEAFIALHKSYADKATDEWYPLFYTILNNKLQDWRRKEAR
RSNPFSFFKKVSLDSDEEVTDVVDETTPNPFEFLDQAVTIEEIQAAIAQL
PVRQQQAFMLRAWEGFDTQTTAQIMNCSEGSVKTHYHRAIQGLRASLAHL
NPSLGGSSDESR
>ACIAD1728 putative transcriptional regulator
MLRSSSVDRKREEEPRLSYMIARVDRIISKYLTEHLSALEISLPQFTALS
VLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRIL
VTVTPSGLDKLNQCNQVVQQLEAQMLQGVDINLAFLIRNNLELMVKNLST
FSSLDQSKE
>ACIAD0347 putative transcriptional regulator
MIMALSSFGKILTVLDLFSVHRPIINVDIICEELALSKPTGYRYLKELVS
SEILQRISGTSGDYTLGPKIAVMDYISRTTDPIVQMSSPFMRDIAERTEL
CCLLTHLNRDYCIDVHHEVFRNADLLSYGRGCPRPVYMGSSPKVIMAHLP
KRQIQDYYQRFSRQLAEVDFAHDEESFLIRMKKIKKDGYYISHGELNPDV
TGLSVPIKFSHTKESPMALTLVASKNRFEFINIDKLIEILQANVIHIEQK
SLALIQIEKSLH
>ACIAD2500 putative two-component response regulator protein
MSQDAHHTHLPISHDQAAILIVDDVPENLGLLHESLDQAGYRVLVTTDGL
SAIEIAHRCLPDMILLDGNMPHMDGFESCLQLKASPITQLIPVIFMTGLS
ETEHIVKGFQVGGVDYVTKPLNIEEVLARVKTHLAHAKLLQQQKQVIDAT
EVAIIALDIQGEMAWQTDKATLFLNQYLQDQSGFKLGLKQWFADIKKDKD
NKKRMSCTYSTSTQQLQLILLTPWQDDLSTTKNYLVQIKISSTALSIEDI
LKYCPQLTQREAEVSHWLALGKTNKDIAEILELSPRTVNKHLEHIFEKLC
VENRTAAVAYMNSLVQDQSL
>ACIAD2245 putative transcriptional regulator
MYEERMSLSAPEKSNHLSNNEDTDQHIYHAIVDAIMNRQIGPGTRLVEAP
LCEAFGVTRGVLRRVFVKLAHDRVIEIQPNRGAVVPEHDFQETEAIFEAR
SMLEIGTVKKLARKYKQLDLSELKALIDKEEKVRSAGNLKEWIKLSGDFH
ICLCEANHNPIVTGYLQTLIARTSLLIGMYETKPNHCSVEEHHAILEAIE
QGDEQKAIKLMEAHLGEYARSFLDEQPDTKSPNLIDIFQNKKLQK
>ACIAD0622 conserved hypothetical protein; putative transcriptional regulator
MYLPTHFKQENQAELFDLIEHHPLGTLIVMHADGLEVNHIPFELDRLHLP
AGILRGHIAKANPLASLLSEPQSAYVIFQAEQHYISPNWYPGKQEHHRVV
PTWNYRVVHATGQLSVIEDQKYLRGVLARLTRQHEADQPAPWRLSDAPAD
FIEQQLEKIMAIEFNIESIIGKFKLSQNRSQADVAGVIAALNELEPQIAN
SIHKFYPK
>ACIAD1082 putative transcriptional regulator
MNLERVDLNLLIYLDVLLREKNVTRAAEQLGVTQPAMSNILRRLRNLFND
PLLIRSSEGMTPTERALELQPRIRDALSDLSMILEPRTEFRPYTSSRVFR
IMTSDYAEATLIPRLIKALRSEAPNVVLDFLTPSDVSYRDMEQGKVDLAI
NRFNDIPQSFHQVLVWRDSFSCLLNDKHPAVQHLNLKSYLDAQHIWVSKT
GMGVGFGVNPDKQAGLGWIDQALERIGQKRKISVFTRHYQMPALLAQNVD
LIATLPTRIARLQAQNPKLVIKDPPFYIPEFELKMAWCPLLHHHPAHRWL
RQLILFVARQMIEEENREFMVNNSQFSHY
>ACIAD2333 putative transcriptional repressor of for multidrug resistance pump (MarR family)
MTKKYSRFLPSEKSFNIDNFPYYWVTQVHSQYVHNIDNVLKRYGLDNSRR
RILLALNIKQNASVSELSEMIISKMSTTTKIVYRLKDEGFVNTYSCENDA
RITRVNLTEQGKEMIHKINSLTGAVLEQSFEGLTPLQIEKMIDGLKIIFK
NLSS
>ACIAD1840 putative transcriptional regulator (AraC family)
MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDA
GRAAISVGYESASQFSREYSRLFGESPQRDIQRIKQNT
>ACIAD0105 putative transcriptional regulator DNA-binding,transcriptional regulator (LysR family)
MFDLDSRLLNIFYHVYKSKSVSAAADAIGVSQPTISNGLIKIRQHFGDPL
FLRVGNEMIPTELSKQIFPLISEVINKVESINNFSVNFDPSKSDLLYTLA
MTDVSHLVLLPQITQFLNKNAPFIRLNVRPISSETSYQMANGEIDLAIGF
LPQLEDGFYQQKLFSQRYVVISRKNHPRLKEERISVDDYIREMHIDIDAG
AGHYHIENELQNKGLKRNVLIRLPSYLGVGLVVQETDAIATVPYYLSQVL
LARGNLQIFDAPLDFPTYSIKQHWHMCCHHKTSHQWFRQACHEIFKTIV
>ACIAD1300 putative transcriptional regulator
MFALKNMEKTTVLNRISFRQMEYFVSTAQHGSIIVASEKIHVSPPSISAA
ISHIESELKVKLFIRQHARGLSLTNIGEKILKECLFILGQTYALYALASE
YRGLTQRALQVGCHHVLTPLIYSDIVHDFNLLHQQDDIRLVDGSHDELMN
ALLSNKVDMAITTNLQIDHNLICFEPIVSLPPHVLVSEHHPLAKMKSVRL
EDLTQFPMILHDSPYYKDYCTDLFTQHNLVPHIKDTYKNYDLVRTMVADG
WGYSMTNLRHKLEHTLNGKKLIRIMLEGDHAPVSIGIATISSVNSNEVTE
KFMSYCKDFICEYYHDHASCSFTLTSSIKKTRSIPSVA
>ACIAD1865 putative transcriptional regulator (ArsR family)
MSKELEIDLIRQSADAVVTILKSLANTDRLLILCYLAKQELNVSQIEEKT
NITQPTLSQQLMMLRKSDVVHTRRDGKQIFYSIKDEKLIIVLSTLYELYC
PQ
>ACIAD2022 putative transcriptional regulator (AraC/XylS family)
MSRRPREQVNYLHLKELGGLEMLSAQYYQQEFSRHVHEGFCIGVIEEGAQ
RFYRTGGDHIAPKGDIILVNADEIHTGSSAVETGWRYRAIYPTPEILDAL
TRDILSNKGFVPWFTQAVVHDQGLAQQLRLLFDLLEQPNNLLLKETMFLS
TTAWLISRYSQSKPSPLVLNDSKSSILNIQDMIASLPEHDFSLSELAAAH
LSQWHFLRQFKKHVGFSPHAWLIQCRILKAQKLLRQGISISEVSQRCSFS
DQSHFTRHFKNTFGITPGGYIRSLKP
>ACIAD0135 putative transcriptional repressor (GalR/LacI family)
MQSNVNKKTITISDVALAAQVSRTTVSHALNGKGEVNPDTRKKIQEIAEQ
LGYRPNRFAKALRSGGTKTIALISTIPSAISGGASKLGFMMEVANVAAIY
ALEHDLYILLVPFIDHNNFDGNLMNVDGVILLEPCLNDPIVKKLLQYKIP
LVCIGTPGQDNKEVPYVDLQSEQTAIKLLEHLVEEGAHQIALITGQSKRN
ASLKAEEIYSQYCQQYAMTEVVYKVEEHLGEMGGKSAIAEIMKQYPKTDA
ILVMIDTFATGVMQYLTEKGISVPKQMKVVTRYNGIRALTSNPPLTAVDL
HLDDVAKIAIDLLITQLNEDIETGSLRVMPAPEIIKRTSSVQISSSN
>ACIAD2547 putative transcriptional regulator (GntR family)
MSEYMTLNLKIEQPPITLREMALTNLRNAIITGYFPAGKRLVERVLCEEL
GVSRTVVREAIRYLEAEGLVETLPNKGPIVSVLNWHVAQQIYDIRLLLEQ
SAVVDCTEKLDERNSQKLQSHLQKLHDAFEDGKMQDLLSVSRDLYRFIFE
IANHDIAWEVVERLNGRISRLRAMTINSPHRAVSGYERICTIVEAILKKD
TNAAKAAVAAHLQEASTIAKQILENQTQDD
>ACIAD1014 putative transcriptional regulator; putative regulator of acetoin metabolisme
MDMSKKQGFDIHSNSGLILGESSPDEILKRESAPLLDLGQEWQQALFGRS
IQHCHSELLHIAEDAGMAIGITDHHGTLCWTWSSHLMRSSAEQVHFVQGG
HWSMQAVGKNAIGLALKTNRASCVYSHENQMNSVRDWVCYAAPIIDQATG
QLHGIMNLSTKYEKHNALGVLAVERCADLVRRAIQFEQTNVLYIKVLGTP
RIQFNQKVLTLSHRQIEILCILALCPDGISLDELHYALYGDRQVTNTTLK
SELSQLRNLLPDCIQSRPYRLNCEIQSDFLMSEQALNQGFTTTVLSLYKG
SFLNKSDSPFLCAWRDCFDARLSHLIYQMKDVDQLFRLISRAPERVDAIH
RLFDLLPEDSPYREKLNKLLE
>ACIAD1161 putative RNA polymerase sigma factor
MTANQQIITHYIAELYKAHYGWLYGWLYKKLGSAENAEDVLQDTFTKLIR
SQGLLDIQQPKAYLTTTAKRILIDRARHQKIEQSYLEYLAQQNLTYDISP
EQTVLAIDILNQLAWVLDGLAERQQLAFLMHYIDGLSLVDIATRLKVTSR
TIHYDLVKTLSHCYCVLKSDS
>ACIAD3022 putative transcriptional regulator (MarR family)
MPKNHEAYMQQDASILELDNQLCFLIYSTNLALHQLYRKLLSPLGLTYPQ
YLVMLVLWEKDQLTVSEIGSRLFLESSTLTPLLKKLEHLGLLSRKRSTRD
ERQVIITLSSQGQELKQQALDIPHQIAQASACNLDELMQLKEQLETLRTN
ISQ
>ACIAD1264 putative acyltransferase; putative acyltransferase for phosphonate utilization (PhnO)
MIEIRKASTHDATAIQTLLTQLGYPQSLEFIEKKIRLFESDERQFIFVAD
IDHKLAGFLSLTMIPQIALEGDFARIAYVCVDQQFRGKRIGQTLVAYAEQ
IAKSWGCNRMELHSGDHRKQAHEFYLGQNYEDAPKYFRKFL
>ACIAD1165 putative transcriptional regulator
MKTFEDQPAELLFQTLRQIRQASKIEDIFDVVVEFAQNIDFDRLIICSIA
PHGKEELIDEVFFVYGNWTDRTNIEERNKYLRNCPITRHIFDYDEPFFWT
KTFNKNNSKETYRVIKNISERGEESGVQVPIFGRTGLEGAISFAGKLSDL
GADFRFILQSVCVTAFREIQSKRSLNLLRENSVLTQREKEILKWTAVGRK
QSEIAEILKISERTVENHLRSIRKKLEVKSTGQAIASALLKGEIDL
>ACIAD0353 conserved hypothetical protein
MTKQYLTHRCLIAPPEMADDFFANTVIYLARHDDEGAQGLIINRPSGIQV
RELLNDLDIEADHVQPHEVLQGGPLRPEAGFVLHTGQPVWHSSIAVGENL
CITTSKDILDAIAHNEGVGRYQIALGYASWTKNQLEGEISRGDWLICDAD
MDLIFNLPYDERWDAAYKKLGVDRIWLSSEIGHA
>ACIAD0579 conserved hypothetical protein
MAWMRLLLMTSLAFGISACQSIIPKASGLSQSNWSAWSHSDYQRQDQVDV
QWRKQSFSFLLYQQQQGQVLELVALSLTGQQLFQVDYDGQQVLVKQRIEQ
MRLLPFEFVVRDILLATYPNFAEQQHTAIYTQPTVNGQNIYIKQQLALKI
SALEQHIELDNVQVPYQMTFSPIENTLQPN
>ACIAD0160 putative transcriptional regulator (AraC family)
MTYQTLQQLQRHKTQLIDTVQLGSGMQIAAWRNQQDLVSVCSNHHTLSLY
IQGGYESYRKTPHGWRNGGAPDRFCLMPEAHESVWDIRDQLSFVHLYYTD
QHLRTLACKIWDKEPAQIQLQEQSFVSDTKVSSVYRHFLLGCDWRDSSNH
LQLSSAADLLLNHLLQSYSNVQWQLPRVRGGLAPFLLKRVKAWINEHLHT
AITIADLAAQTQLSEYHFAHMFKQSTGVSPHQYVLQQRLERAHHLILHHS
CDLTQIALQCGFSSASHFSTRFKHHYGYSPSVLRRQAY
>ACIAD0047 conserved hypothetical protein; putative transcriptional regulator (TetR family)
MSIRDERKQQSRQALLDAALQLSTGGRSFSSISLREVAREVGLVPTAFYR
HFQDMDALGQELVDQVALHIKSLIHQLGQSYLQQVSTHPDSSIELFFQAI
NHSPLEWQFMIAERWGGSAAVRQAIAREIEDLIEDLATDLRKLPMFEHIQ
DSQDLKVLSTILINLSFTWAMTWLSLASQYQDAALSQHQQQFVENANTQI
RLMFRGVANWG
>ACIAD1964 conserved hypothetical protein; putative protein kinase
MTKIIQCQTLDGRPVAFVDEVIGSGAMKDVYFSPDKSYVVCFFSKEKNHF
YQSHAELERQKDRLKEIVGNKWQGIFNSAGGDYWKNVFCWPDGLIEYNGL
LGITAPTYQKQFFFEHGSKNNDFLGIKGKEKEGKWFASANNQNRFLDEKE
KGNFANYLKICILIARAVRRMHAAGLAHSDLSYKNILIDPVTGSACVIDV
DGLVVPGKYPPDVVGTPDFIAPEVVKTNHLKKDDPQRNLPNIMTDRHALA
VLIYMYLLYRHPLRGGKVHDVNDPQRDENLAMGENALFIEHPTDTSNRVK
VSQVRPSALPWADPEKIPFTVTGPYLKELFLQSFVAGLHQPQQRPSANDW
ETALVKTVDLIQPCLNSDCGQKWYVFDNTIKPVCPFCGTAFKGKLPVLNL
YSARREGSFRPDNHRLMVWTGQSLYPWHVNNLIAPNERLTAEQTKRVGYF
VFHQNQWWLVNENLPDLMDVATKTTIPIGEKIELLDGKQILLSRQDGGRL
VVVQIVECI
>ACIAD1622 putative transcriptional regulator (AraC family) (nitrilase regulator)
MNHYQSLNPIHYSTQDIHASERFEYWNDVVLRHCIPAQSKPEDKRNFNGE
LNVRHVGLIDICTVSSTMHFWERTEKHLRTGPNDDLWLGFMEDGNGELVQ
GGRGTKYQNNSLMLYDAAQTFKFNLSGQKNHLIRIPRHLLANRVPNIEQL
TAQVLDESRPGIIPLREMLRQSVDATYDFSNIDFAERFTKSALELLVLSL
EVQDLSKVAIERDLYSKAMNFILRHLCDPELNLEKVAQAHCVSVRTLSRA
FARHQKTVMSVIWSERLNASREALKSGRVTSVSEAALDYGFTDFSHFSHA
FKKAFGISPREDFKKLSSS
>ACIAD2530 putative transcriptional regulator
MRQTKNSVKLEQYIGIQIKRHRQEQGLKLSEVAQIAGISQGMLSKIENAQ
VSTSLETLSRLCDVLGIPMSTLFSQYDQQESHAMLVKSGDGMEVVRRGTE
KGHTYRLLTHSRGPRKNFEAYLVSMDDASEEFPTFAHPGTEMLYLVEGEL
IYRHGQEVFHMQPGDCLTLEGEIPHGPEKLVQVPIRLLSVMNYGSSEE
>ACIAD3472 putative transcriptional regulator (Lrp-like)
MKKMQDLDPIDLKILALLKQDSRLSHKQIGALVHRTGQAVGARISHLIEQ
GVIERYTLAIAYPQKQFIQLFLNEPRFSEIENIINHFEQVDEFYKVMGNA
CYMVVAHFSPQELNLFIEQISKWCRYSVESVIKKI
>ACIAD1748 hypothetical protein; putative transcriptional regulator (Cro/CI family)
MNFIQHSDKRLNNTLANIQDDFLSHHMVRIRRALNISQAQLASKLGISAR
TLESWERGVRHPSSSAQALIRLFIQSLHFVLKNLG
>ACIAD2979 putative transcriptional regulator (AsnC family)
MDKIDKKILAELQQNGRLSLTELAEKIGLSLSPCHRRVRALEESGVIRGY
RAQLEPALIGLQFATIVFVTLRDGDKASVSAFEEAVIEIPQIVQAQRLFG
DPDYMLHVVTKDLLSFQKLYDERLSAMPNVQRLISTMVMKNVVTDRLYPI
>ACIAD2533 putative transcriptional regulator; putative transcriptional regulator (LysR family)
MHWDDVKVFLAVARTGTLTTAAEKLNLGIATVSRRLERLEQDMAMTLFTR
HQTGYQLTLEGEALLSNAEAFENAALSLTESGQNHAQAQGLVRLAVSENL
ANGLIIPSLQSLFSRHPELRIEINSGVQLTNLHRRDADLAIRTIQPDVGN
LTIKRLGTLRFGLYAATSYMKFIQDHDLHPDQCHYVGWADTHQHLSLAHW
MKDFTRNQNFKIETNSLSTQIDAVKSGLGIGLLPDFIANQLGLVQINDNT
LVEQPIWLVAHSNLITAKRIRTVMDHLIQLFAEHPSFQ
>ACIAD2017 putative transcriptional regulator
MFTKQDLLQQRNSIDQLRRQNSLSPQNAEKLGQSIASSWQRSATAEIPKE
RLAAPLTTQQSRKNTTALDFALERCEEDLRHVAEQSSMVIAVGDVGSTII
WTAPSLQMRSAAERVHFIAGGQWREELVGTNALALSLKTQKSSCVFSNEH
YMESVHDWVCYAAPIIDPYSKQPIGVVDLSTTWKNHNSLGVLAAERCASI
IQSALLEQQRQHLYIRAFSVPQVVFNGKNLVLTPRQIEILSILALCPQGL
NLEKLHHALYGERKVSIGTLKAEMSQLRDILGGLLGSRPYRLLAHVEADF
LQAEQALDAGYVSSALQLYTGVFLSKTDSPFLCAWRDCLESRLSDAIFKA
KETDMLLKHLARFPEAIDAVERLMELLPLDHPAHQSLIKYQES
>ACIAD1973 putative transcriptional regulator
MIMNYLNREQRRAMIIDAAKEVALQDGLNGLTVRRIATEAQVSTGQVHHH
FQSSSHLKAEVFIELMDQLTEVEKQMQTSNSFERLSLLLGFENLEQTQPY
LRLWNEAEVLIDQDIEIKRAYNITMERWHSTLVNAIEQGMENHEFSLPLH
SPIKDIAWRLIAFVCGMEGIYQLGLNGLDAHSFKHHVEIMLDMELRPKTR
>ACIAD3274 putative transcriptional regulator
MFQTVVECGTMAKASMQLHCVPSNITTRIKQLEEELGSPLFYREGKTLKL
TPSGEIFLEYCHKILALCDEAKRSIHPDAPPSGPLRIGAIESSASTHLPR
LLAQYHQHYPDVSIQIITGTWKQLLLDVSQHKLDAAMVAGAIDFPCLNKV
EIYQENMVLIAPASMGIIRNQEDLINKEIFMWTEGCPYRAALETWLKLKH
ISLPITSITNYATIIGCVSAGLGVSLIPKSIYAQYKNLPQLCSYEFDRLA
TIPVHFFWHQKILNHKARDAFLKLLTLEFLEKNQ
>ACIAD2084 putative transcriptional regulator (AraC family)
MTHLSNQFWTDPRMPYVETRRACMSRICYKAHSHPTFSIGAVDSGKSYFS
SYLHTNMEISAGTVVSIPAYLEHSCNPLPNQTWSYQMMHLELNWVKQFFE
ETVAESFGSQIPELKPEIIHHPKIYQHFSHLNTMLFDSERTILEKEQLLI
ETLNQIIFPSLQLKYLNDKKNSTNLLSKLLEILLQHDDFISLEQLSRYGG
ISRYAIIRLFKKNFGLTPHAFQLNMRVNQARELLKKGKAIIHIAYDLGFV
DQSHFYRVFKSLTGISPKDYQQHFSRNFIQE
>ACIAD1041 putative transcriptional regulator (AraC family)
MPISTKQSELIIGLSSEHRYKEITYAHAHLRAQLLYASQGSIQVFTPDQV
WILPPMCALWIPPRVEHSVISLSQVKLNTALVEENAAKSMGEHCFLIRVS
NLLHELLIRFNELDELKDHPDDRSRQLSHALQIIVFDEIKRANSLPVQIP
WPKDHRLIKICETLLRSPHHVYDLNTWADEINTSSRTLMRMFQRETGLSY
RAWLQQMHIALALKQLSDDQTIGQISESLGYTSASAFSAMFKRHMGITPQ
QFKQYKK
>ACIAD0124 putative transcriptional regulator
MQIPSSCKVYFNDNHYNCLNNIYDRVPFSTWQKIIYEIYEQYPVSDLSIK
IARHANISYAGLPGYLILSRENLYQAAMDFIYYERLIVDFNSGTLKVKNG
LIEVGWSDFHGKAGLLVDEVIIFTYIEIAKHIIYPQELKLEKISFYYDKP
DNTDFYEKILGCPVYFNSPTISVVISAAHLESIKLPTKDPILYAILKQKA
NRLLLELPSNHDFEQRLEVCIMHCIKEISLNNVADYLNISVHVLKQNLLE
KDLNFSVCVNNVRKKLAVAYLENERLTISQISELLGYSEQSAFQRAFKIW
MNITPLQYRKNLKQDDYLDLKVLD
>ACIAD3497 putative transcriptional regulator (ArsR family)
MLMDIDAIFKALANPTRRQILEWLKHPSDYLSAEECGYFERGVCAGQIER
LGKVSQSTMSNHLSVLQQAGLINVEKYGQWSYFSRNEALIQQYLNHLKET
L
>ACIAD2742 putative transcriptional regulator
MSTNQGIHLLQEMAIFVKVVETGSFSETSRQMGSTPSAVSRAISRLEKAL
GTRLLQRTTRKLRLSESGQQIYENCLDMVNAAQAVMQSSGQFHAEPQGTV
RMSVPKAVGHFMIHPHMPEFLQRYPKIDVQMLLEDRYVDFIDDGVDLAIR
ITDQPPGGLMGRRLIEIGHLLCATPEYLAMHGTPEHPHDLKQHACIYLGE
QPSDSKWKFQQGSKSITVAVKGRYSANHTGIRLDAALKHLGIASLPYFVA
RHALESGDLIQVLPDWYFKTYYSGDAWLLYPPTRHLPPKLSVLIQFLAEK
LAQEPNLSSFFQGDKSRY
>ACIAD3227 conserved hypothetical protein
MLSMQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHF
MGKQGWIITTRGKGGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCV
LRSHCGLKGILDQALEQFYQSLDQYQLKDVLRAPPTYSPIAFLSL
>ACIAD1545 conserved hypothetical protein
MKWHELGEMNCPIARTLSIFGDRWTLLIIRNAFMKTRRFDDFQKQLGITR
HLLTERINRLVEQKIFEKVLYHEAPKRYEYKLTEKGLALYPIIVTMSTWG
NIWQNENKQFPELRYLHKNCGQLTSPSLTCDCCKQPIDARQMSPVYVSGE
E
>ACIAD0285 algR, alginate biosynthesis regulatory protein
MRILICDDEPLAIGRLSRLVIQLGHDVVATAQNGQQALELVDVYQPDVVL
LDIQMPDMNGLLCAEQLSLMDPMPAIIFCTAYDDHALDAFKSKAQGYLLK
PIAQPELQRVLEQLPRLNQVQINHIKQKEDIDTLKTQRHQITARTYRGVE
LIPVENIYYFLADQKYVTVRHKNGSVLIDETLKELELEFQNRFIRIHRNA
LVSVDYLDGLEVISSGQYQVRCREVNERLAVSRRHLPYLRDRMQKM
>ACIAD1410 alkR, transcriptional regulator (XylS/AraC family)
MDALSKIFDDIHLNKSEYLYVKTQGEWAFHMLAQDALIAHIILMGSAHFT
LQDGTTQTAYSGDIVLIPSGQAHFVSNDAQNKLIDCSNIQSFFDGHRNDA
IELGTTSSDHGLIFTVRSHIDMHMGSPLLNALPSLIHIHHAMSSTGPEWL
RVGLYFVALETQRIQPGRDKIFDHLMSILFIECVRDHIAQLDDPKSWLTA
LMHPELSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPL
AYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPK
HYRQQS
>ACIAD1431 areR, sigma(54)-dependent transcriptionnal regulator for areCBA operon
MQISSSRDWCQVKDYFYKTGQVPEQTELDPTILQMWHKAKAAGLSPFTPV
PASTQQPLTTDDIRLSETVFPILKDIWALFKHQNICTFFLNTQFKIIAEY
QNPDPHSPYHFLKQGQVLDIAQFGSIAPSCSILSQMPIIMMGHQHYLNEF
SDFYCASVPVFNGQGKILGALDITSYREQLASNWLRHLLYQGYVVENEII
KKNMPAQHKLLYFQHSEDLLKTAYTGMIEIDATGQIQKANQMALTLLNTS
IDQLLYKPISNYFSSISTLASLEQQTQFIRSQDEALFYARLYTPQMTKKT
SHLFSTSTPDFKDIAKLSKILHSDVPILITGATGSGKDHLARQIHEFATK
DQAFISINCAAIPEHLLESELFGYEAGAFTGASAKGKRGLIELAHQGILF
LDEIGDLPKHLQAKLLRVLQDQVFYRVGGHKPIQSQFKLISATHQDLLAM
IDNHDFRSDLYYRICGYQIELPQLKDRPDKIDIFKTLLANAKIYSWSVNV
QEQFEHYDWPGNIRELTHVIQLSAALIAHDSLEHAHLEHLHVPQQRKVTP
QSYLANKPQTSLNQMTKQLVLDILQQEKGNISQAAKRLNISRTTLYKYLQ
>ACIAD0627 baeR, transcriptional regulator protein (OmpR family),response regulator in two-component regulatory system with BaeS, regulates RNA synthesis
MKHVMLVEDEVELAHLVRDYLEASGFEVSMFHDGQEAYESFLQRKPNLMI
LDLMVPRMDGLTICRKVREQSDLPIIMVTARTEEIDRVLGLNMGADDYVC
KPFSPKELVARVQAVLRRLDRKAEPEQNDLFRIDKAQQRIWYKQKSLNLT
PTEFRLLELFLEHLGQVYSRAQLLDHINPDSFDVADRVIDSHIKNLRRKI
SEAADTGNRHEWVQAVYGVGYRFEYPED
>ACIAD1435 benR, transcriptional regulator of benzoate degradation (LysR family)
MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLER
GSRPVKTTPEGHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSL
LFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKIS
DPAIKRTLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPK
PNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGISLVPASTQSI
QLFNLSYVPLLDPDAITPIYIAVRNMEESTYIYSLYETIRQIYAYEGFTE
PPNW
>ACIAD1010 betI, repressor of bet genes
MNKRRVKPEHVRREEIVNAAYEVIFEVGLSNTTMAQIAKKAQLSVGIVSH
YFGDKQGLINACMLEMLNVLRRKTAQYKAEVQDSHPESMIKAIIDSNFDI
SQVNQRAMRIWLDFWSASMHMPELSRLQRINDQRLYSNLKFHFLELMPKD
QASIAARGLAALIDGLWLRGSLSQDTTFDSTLARSIAYDYVDTQLKLVKQ
IRQERQNE
>ACIAD1445 catR, Cat operon transcriptional regulator (LysR family)
MELRHLRYFVTVVEEQSISKAAEKLCIAQPPLSRQIQKLEEELGIQLFER
GFRPAKVTEAGMFFYQHAVQILTHTAQASSMAKRIATVSQTLRIGYVSSL
LYGLLPEIIYLFRQQNPEIHIELIECGTKDQINALKQGKIDLGFGRLKIT
DPAIRRIVLHKEQLKLAIHKHHHLNQFAATGVHLSQIIDEPMLLYPVSQK
PNFATFIQSLFTELGLVPSKLTEIREIQLALGLVAAGEGVCIVPASAMDI
GVKNLLYIPILDDDAYSPISLAVRNMDHSNYIPKILACVQEVFATHHIRP
LIE
>ACIAD2597 cbl, transcriptional regulator cysteine biosynthesis (LysR family)
MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFI
RKGKRLLGLTEPGQSLLGIVERMLVDAENIKRLADDFNKVDEGTLTIATT
HTQARYVLPPIVNQFKKLFPKVHLILQQASPTEISEMLLQGEADIGIATE
SLTTEENLASIPYYQWEHSIITPQNHPLTQVPEITLETLAHYPIITYHGG
FTGRSKIDKAFDDAGIDVDIVMSALDADVIKTYVELNMGVGIVNDVAYDK
ERDYRLNQIKTGIFGLNTTWIAVRKGHLLRGYGYEFISLCSPEANIKELK
KIAYPED
>ACIAD1948 csp, cold shock-like protein
MSNSVNGTVKWFNEVKGFGFIQQDSGPDVFAHFKEIASSGFKTLYEGQRV
SFGIVDGQKGPSAVNIIAL
>ACIAD1787 csp, cold shock-like protein
MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRV
EFLVVNGKKGLQASNISIVK
>ACIAD1688 dcaR, transcriptional regulator (IclR family)
MSPSAETKNNDKTLNFDEIRLDPISHIHRENNPQFIASLARGLELLRCFS
LQHQVLGNQELAKMTGLPKPTIARITNTLVSLGYLKQMPNSPKYMLDLGV
LSLGYAALSNLSIRTTAHRFMEEMSMYAQAPVALAARDRLNMLYLDVVQT
NSTMRRPIGSTLPLHNSSMGRACLAATPKQERYFLLEAIQKREPENWIEI
KEKLDIAFDQYAEYGYCLSLGEWQQGINSVAVPLMSTKHGLYVFNCGAPS
YALSTEKLIEDIGPRLKYMVNSIQDALTESL
>ACIAD1684 dcaS, transcriptional regulator (IclR family)
MTDLNETEQTEKLLVPSRHELLHPIEDMQDEDDRQFITALARGLELLRCF
SAKQPHLGNQELSQMTGLPKPTITRLTHTLSRLGYIRQVPNSTKFQLSVG
VLAFGYSMLSNVSIRSIAQPYMKELADYAGAAVAMSTRDRLNMIYLDVVQ
GKGNVTMRRQVGTYLPIHLSSMGRACLAAMPEDERDFLLNAIRHKHKEDW
IKINRDLDKAFKDYQDFGYCFSIGDWHKDVNSVAVPLLHEQHGLLVFNCG
GPSFIMKREKLEEDIAPRLLHMVNNIKTEIS
>ACIAD1063 estR, esterase operon transcriptional regulator (LysR family)
MAALPSLRQLSYLVTLSETLHFTEAARRSFVTQSTLSGGIMELERLLGGV
LVERDRQNVRLTPLGEQVVARARVLLADAQDLMRLSREMSEPLTGDLHLG
IIPTIAPFILTQLLDEVHKQLPKIQLHLHEAQSEKIVERLEHGNLDMVVL
ALPFDTRGLKVADIAKENLYLVCNKHDKHSVNAHSLDDLDLSRLMLLEEG
HCLRDHALSACPIGERKNDNRLKASSLPTLVEMVSSNLGFTLLPEIAINT
HMLKFNDDLLVKEIENAPSRTLALITRKSTPLQSEFDVILDILKRITATL
H
>ACIAD1778 fecI, alternative RNAP sigma factor required for fecA promoter recognition and ferric citrate transport; activated by FecR
MLYREHHSWIYTWLYRRLGNSADAADLAQDTFIRVITRKSLLEIEQPRAY
LTTVAKSLMLNWFNRRNIEQAYLEVLANQPEFEHPSPEQRYLIVETLIEV
IQLLDTLPDQIRDVFLHAQLENMNYQQIADQFNLSLSTVKRHIKKAYIHC
LTAMLDTDFSC
>ACIAD2446 fis, DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replication
MIFGLTRMNSKSPIFTAQSDVALRIHVDRAVRHYFAQLQGEQPSQVYDMV
LAEMEKPLLSVVLEYTRGNQTRAAEILGLNRGTLRKKLKAHGLMSE
>ACIAD0260 gacA, response regulator (Global antibiotic and cyanide control protein, LuxR/UhpA family)
MITVLVVDDHELVRTGICRMLEDQADVDVIGQAESGEEAINIVRQKHPQV
VLLDVNMPGIGGVETTRRLLQTAPDTKVIAVSGLAEEPYPSLLLKAGAKG
YITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDALS
EREMQVAMMVVNCISAQEIADKLFVSVKTVNTYRYRIFEKLSIDSDVKLT
HLAIRYGLIKP
>ACIAD2862 greA, transcription elongation factor, cleaves 3' nucleotide of paused mRNA
MQRYPMTPEGKLALEKELQQLKSVERPRIIQAIAEAREHGDLKENAEYHA
AREQQGFCEGRIQDIEGKLGAVQIIDVKELEQNGRVVFGVTVTIENLDTE
ERKTYKIVGDDEADFKINKISVNSPIARGLLGKSEGDEAKITTPQGEVEY
EIVSVEYI
>ACIAD2814 greB, transcription elongation factor and transcript cleavage
MNRKLLTAEGYQRLQDELNDLVRKERPEITKIVSWAASLGDRSENADYIY
NKRKLREIDRRIRYLTKLFEVAHKVEYSPEQDGKAYFGAWVELENDEGEI
IKFRIVGDEEIYGRKDYISLQSPIAKACLGKSVDDEIQVQTPTGKKIWYI
CQINYNQ
>ACIAD0448 hcaR, transcriptional activator of hca cluster (LysR family)
MELRHLRYFVTVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVQLLYR
TKRKVELTEEGAVFLEQARLTLAQADKAVMMARKVSQAKQQCLRIGFVPV
AEVQVFPHVLPNFRAHHPELRIELHSLNNDQQLKALKRGELDLCFIRDNI
QHRDGIHSQLVLSEPLIFILPKQHPLAKLERIPLEALNNIDFIIPAADQA
RVLNQHILQFAKQHQIQFNIIQSADTVLSNITSVALNLGCSILPNYVSTL
LPENCVMRPLDIELPHFDLFMAYQSASKTPPVTTFIKALDKWFQPAGY
>ACIAD1204 hepA, RNA helicase
MWSSFEIKVEKLQQFAIGQRWLSDTETELGLGVLIDVDERSISILFPKSD
ETRVYARNNAPLSRIVFNVNDEVQDQEGHKWLVESIEDRHGVLRYNVLRT
SSDGETERKALNETRIGAHIQLSKPLDRLLASQVDYKEWYDLRIEALQMQ
AQMHRSPLRGLIGARVGLIPHQLYIAHEVGQRFAPRVLLADEVGLGKTIE
AGLIIHQQLKTGRAERILILVPDSLQYQWMIEMRRRFNLQFSLFDLTRTA
SIKEHDPDLNPFLTEQCIIASVDLMVDHDDLREQALEAGFDLLVVDEAHH
LMWNEEEGGNDRYDLVEELAQQTPGVLLLTATPEQLGVESHFARLRLLDP
QRFSSLERFLDEEEQYLQTAKIAEVLMSDEPLAAEHLTALQTLLGHSIED
VPEQRYRAIHELLDRHGTGRILFRNTREAIQGFPGRDCQPAALIAPENWS
MDGKLREQMWPEEGQLDGSWMENDPRVPWLMEILRKELKHNKVLLIARSG
PVVEALENVLRLHAGIRTAMFHEGMSLLERDQAAAYFAEESYGAQILLCS
EIGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYL
IGTAQERMFRWYNEALNIFSSISPTAQTLQENFIVDLKDCLLADLGQKFE
DLLEEVNVQRQALEAELQAGRDRLLEYNSCRPVVAQKIVQALEDYDDNTM
LPMFMKRFMSSTNIDFDEQSNGTVIIKPTDQMQVQGLTLDEDGMTATFYR
DQAQIREDAQYLTLEHPFIESVMEMINTQSFGSTNVALLKSNALKQGSIL
IEVWFKVDVVGPRSLNLPSSLPRQLVRVLLSETGQDLSEKIDPVILRPYL
HHLDGNSCRQVVKARRDVIEQRYSQALESAKEGLPVLKEQAKKYYSQKWQ
YEIDRLSYLKQFNPSIRQDEIDRLTKLQKEGVDLLEDISLTPSAIQVMVV
VKP
>ACIAD0967 iciA, inhibitor of replication initiation (transcriptional regulator of dnaA and argK (affects arginine transport) (LysR family))
MLDNKQCDAFFAVAEQGSFEQAAIQLCITASAVTLRVQALEKELGQLLLI
RARPCTLTHAGQQLFEHLQHTRRLEQNFLHNLTDATPSQFFKVMMAANAD
SLATWLLPALNEVASQQKLMLEILLDDQSHTHALMEKGTVSACISIEPKA
MKGCKSVYLGSMRYKMLATQAFQGTWFRHGVHREALRVAPAIIFNHKDQM
HFDLLEKQYGLIKGAYPYHYIPSSACFFTAVQLGLGYGLVPELQLKQAAD
PDQLRDIMPEMQLDIPLYWHHWQQQSRPLQSLTEHLTQHAAKYLSPL
>ACIAD1405 iscR, repressor of the iscRSUA operon, involved in assembly of Fe-S clusters
MTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRG
ANGGYHLARHATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLW
QELSHHIADYLAKITLADLIARDNVQTVALRQNTVNYDSALLSVTGI
>ACIAD2973 kdpE, regulator of kdp operon (transcriptional effector)
MSHSFNTQASILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILAS
QGADLLILDLGLPDMDGAEVLKEMRQWSQIPVIVLSARPDEQQKIKLLDA
GANDYVTKPFSIQELCARIRVMFRQQPSQSEHNLVFNDGQLFVDVAEHSV
KLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSELWGITHEEDTHYLR
ILVKKLRTKLGDSALQPHYIFTVAGIGLRFQSDVGSS
>ACIAD0107 lldR, transcriptional repressor for L-lactate utilization (GntR family)
MRVSDQVVQKLQGLIEQRHLKQGDRLPAERQLATSLGISRPSLREAIQQL
NSLGILASRRGDGTYIQQLPETWSQQLIVEPISNLIEEDPEYRFDVQEAR
IVLEGGTAWYAALRSTEADRAKIHQCFDEIAYHQLQGDSAAAAVADANFH
LAIAEASHNLVLIQMMRSLFDLLQYNVVLGRKKVYNHPVSADQLSEQHFQ
VMDAIDRQDAQAARDAVCGHIEFVIDHVRSLDEDEARQKRATRLHRIDQT
>ACIAD1648 lrp, leucine-responsive regulatory protein
MSGGFSTLDRVDIKILDILQRDGRISNSKLAEEVSLSATAVLARVQKLSK
EGFIVGYEAKLNPEKLNASFLVFVEVLLDKTTTNGLEEFIEAVAQYPEIV
ECHMTSGGFDFLMKIRSASMEEYRKFAGQTLWQLPGVKETRSYPVMQVVK
ETSQIKLVKRSVKKGAS
>ACIAD0114 lrp, transcriptional regulator for lrp regulon and high-affinity branched-chain amino acid transport system, mediator of leucine response (AsnC family)
MRALDRIDRQILDILQKEGRIAISELASRVNLSTTPCSERVKRLERDGII
TGYHARLNPIYVDRNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHL
ISGEFDYLVKARLKEMSAYRRLLGDLLKKLPSSASSHSYIVMEEIKETLF
LDVIKS
>ACIAD2439 mdcH, transcriptional factor
MIMSSQEKETSNSLYRQWHILSRLSTGKWMGTRELQEILEREGIDISLRT
IQRDLNQIAQRFPIESNKTVPQGWRWRADAPLQSLPHMTSSQAVTFMMVE
QHLKHLLPPSLIDEMNPWFDLARRSLSTQNNVRQWINRVRIVPASQPLIP
PTVDKNAQQAIYEGLLQDKQIECVYTPRNIQADEKIYILNPLALVQKGAI
IYLICTRHDKNEVQTFALHRFKSANVLNSRAMHPVDFDIDEYIDSGALGF
RFDYAKPTEMIQLKLIMTENTAQSFYETQLTRDQKIIPIDENIVEVSANV
PFTSQLVWWLRSFGKKILHIEPVEVHNAVREIDLK
>ACIAD1762 mdcR, transcriptional regulator for malonate utilization (LysR family)
MEIDEELTLKKLQIFLAFMRNGNLSKTASEMEISNVSVHKALHSLESALR
CPLFKHEGRNLIPLKSAYVLQEHSHKLVQDIVVTINKTREAAGFAAKVLH
LGSLYSLTVNTIPNVISRLKLRRGELDIQLLLSSNLDLVKKLKSTELDAI
IVALNETTRDPDFESLPMFEDNIYLAVNKHSPLASLDEIDLSTLKDETFL
TLSKGFATRNDSDLVFEKAGIDPKVFLQVSDIFTLVSMVSTGVGLALLPG
RISTIYESSVKLIPLQGSYQIKQEIGLVFLKSKERDPNLLALVAECRMFA
KQYIAI
>ACIAD2384 metR, transcriptional regulator
MLEIRHLKTLLALREHGSLVAAANDLCLTPSAISHQLKELDHWYGVEVVN
RRSRPVTFSNVGQRLLKLADDILPQIQIAQSDITRIVHGQTGRIVFSSEC
HSCFDWLMPLLNQYRQQYPDVDLDFASGFEANPHDLLQTGEFDLLITADP
IALKGIEYFPIFEYESRLVLSNTHPLVRAEKVTVEELAEQTLITYPVDKH
RLDIMAHLFIPANIQPKEIRTTDLTQMLIQLVASGRGISALPDWVVNEYE
QKGWVTSRRLDCVSANGLRRTLYAGYRIEEKEKSYFEGFLKQLAKFSQKR
AHYYAN
>ACIAD1395 mfd, transcription-repair coupling protein
MHVKIIDMSFIFYTSSMFQQQISELKLKQLKAGEKRWIGSLFGSSGALLF
KEIVQQHTTLLVIVTQNSQHLAQLESELEFYGVKPTIFPDWEILPYDRLS
PHQDIVSERLAILSNMPQTGVLLISASTLAQRVAPIGWVLGEHFDIQVGQ
KLDLEKEKLRLIQAGYHLVDTVYDHGEFAVRGSIMDIYASGQEQPIRIDL
FDDEIDTLKFFDPETQRTTENLKQFRILPAKEFPLKEGRSIFRERYAEAF
PTANPKKNPIYQDVLDGIASPGVEFYLPLFFEKGQMESQSYFTAYLPRNC
IVITNDALDESLTSCWKDVVQRYESRRHNIDQPILSPEHLFLMPNMVLEQ
LKQFPRIHVSSEIIAERVGGINLPVSQPVKLAVDPKKEHPFEVVTKYINE
VNHPVLLVAESAGRRESLKDALRPSLGDIPNVEGFDAFVKQQYAIAITNA
PLDRGLVLSSQLAVISENQLYEHRVVQRRRKRQQEVSEEFLIRSLTELSI
GAPVVHIDYGVGRYAGLITLEIDDQDHEFLQLDYADAAKVYVPVTNLHLI
SRYSGGDPDLAPLHKLGTDAWSKAKRKALEQIHDVAAELLHIQARRQSKP
GFAFELDQSPYMQFSSGFAYEETLDQANAIEATLHDMQLAKPMDRLVCGD
VGFGKTEVAMRAAFLAVQNNKQVAVLVPTTLLAQQHYESFKDRFADWPIR
IEVLSRFGSNKTHQKNIEDLQTGKVDIVVGTHKLLQETVQFHDLGLMIVD
EEHRFGVRDKERIKAMRADVDMLTLTATPIPRTLNMAFSGMRDLSIIATP
PARRLAVKTFVQEHTDDSVREAILRELLRGGQVYFLHNEVDSIERTAENI
RNLVPEARVAVAHGQMRERELEQVMQQFYHKEYNVLVCSTIIETGIDVPN
ANTIIMERADKLGLAQLHQLRGRVGRSHHQAYAYLLVPSIKHLKGDAEKR
LDAIQRASTLGAGFMLATEDLEIRGAGELLGEQQSGSMQAIGYSLYMEML
EKATKAIQKGKTPNFDAPLSLTAEINLHMPALIPDEYLGDVHQRLLFYKR
ISNTDTQEKLDNIRMELIDRFGTLPVSVKQLFHVHQLRLQAEELGITKID
LNSQGGYIEFSQDTPVQAISIIQLMQKQPTYYRMEGGQRLKVTVQLQEYD
KRIQFAHALLSKLIQELHSYS
>ACIAD0368 nusA, transcription termination/antitermination, L factor (N utilization substance protein A)
MSREILTVVETVSNEKGVSREAIFEALEQALVAATKKKFYEGTNAEEAQL
RVEIDRKTGDYRTFRQWTLVADEDHEMPACQDAISDVDASKWSIGDVREL
EVESIEFGRIAAQIAKQVIVQKIREAERALIADAYESKVGELIYGEVKKQ
TKDGFIIDLGDNAEAYLAREEMIAKEILRPKQRMNAILYSVNREGRGAQL
LLSRARPEMLMALMKKEIPEISEEIIEIKAAARQPGVRAKIAVKTNDHRI
DPVGACIGMRGTRIQAVQQELNGERIDVVVWSDDPAQYIASALEPADVSG
IVLDEDTRSADIIFATNDQLARAIGSQGQNVRLASELTGYKLDMMLEEEY
RARQQNEAQQYLDMFVTRLDIEEDLAMALVEMGFTSLEEIAYVPPETFDE
IELDQELVELLQSRAKEAALTDALKQQENVQEPSVELLAMAGMTQELAYA
LAARGVVTVDDLADQATDDISDIEGLSEEKAGQLIMKARESWFN
>ACIAD3572 nusB, transcription termination, L factor (N utilization substance protein B)
MSQTLQAAYAAKRKARRFAVQGIYEWQMSRNPVHEIEARTRVENAMHKVD
LGYYHELLTQVVAQHETLDTLLVPVLDRELNALDGVELATLRLGAYELRD
HLEIPYRVVLDEAIELAKHFGGADSHKYINGVLDRLASRLREAEKQQAN
>ACIAD0301 nusG, transcription antitermination protein
MKRWYIIHAYSGYEKQVMRSLNERIQRSAVADSFGEVLVPTEEVVEMKDG
KKRKSERKFFPGYVLVEMEMNDETWHIVKECPKVLGFIGGTAEKPAPITQ
KEADAILARVRNTGEAPRPKTMFEPGEELLVIDGPFTDFKGVVEEVQYEK
SRLTLTINVFNRPTQVELEFRQVEKTI
>ACIAD3388 ompR, two-component response regulator
MSLVVPAEHTETVHNETDRVERILVVDDDVRLRTLLQRFLEDKGFVVKTA
HDATQMDRLLQRELFSLIVLDFMLPVEDGLSICRRLRQSNIDTPIIMLTA
RGSDSDRIAGLEAGADDYLPKPFNPNELLARIRAVLRRQVREVPGAPSQQ
VEVVSFGSWALDLSTRTLTREGQVVTLTTGEFAVLKALVQHPREPLTRDK
LMNLARGREWGAMERSIDVQVSRLRRLIEDNPARARYIQTVWGIGYVFVP
DGAE
>ACIAD1702 pcaU, regulatory protein for pca operon (activator)
MWSNMDDKKVKEEKILHNSTNKKIIRHEDFVAGISKGMAILDSFGTDRHR
LNITMAAEKTGMTRAAARRHLLTLEYLGYLESDGHYFYLTPKILKFSGSY
LGGAQLPKISQPLLNLLTTQTSLIYSVMVLDGYEAITIARSAAHQQTDRV
NPYGLHLGNRLPAHATSAGKILLAYLDDHAQQEWLNQYPLQRLTKYTYTN
NIDFLRLLSEIKEQGWCYSSEEHELGVHALAVPIYGQQSRVVAALNIVSP
TMRTTKEYLIQHILPLLQETARELRNIL
>ACIAD3557 phoB, positive response regulator for the pho regulon,autophosphorylates and phosphorylates sensor PhoR
MKDDYILIVDDELPIREMIHTSLDMAGFQCLQAEDAKQAHQMIVDQRPAL
ILLDWMLPGGVSGVDLCRRLKRDENLSEIPVIMLTARGEEDHKVQGLDAG
ADDYMTKPFSTRELVSRIKAVLRRANALNGDKVIDANGLILDPVSQRVSF
GSNILDMGPTEYRLLAFFMTHPERAYTRAQLLDQVWGGNVYIEDRTIDVH
IRRLRKVLEPFGADRFVQTVRGTGYRFSTRADLAAG
>ACIAD1718 pobR, p-hydroxybenzoate hydroxylase transcriptional activator
MEQHHQYLAHPHSSEEIRTEDYIAGLAKGLALLEAFGIDRQRLNVTQVAE
RTGISRTAARRYLKTLKFLGYLDTDEHYFWLTHRVLRFSSSYLSSAHLPK
VAQSFLNLLCAQTSLTFSIVVLDEHEVVPVARSYLPQQDNLRVSPYGMHL
GNRLPAHATSTGKVLLSVLDREVQIEWIEKYGLKRLTPYTITDEHTFLET
LDAVRQSDYCLSTEEHELGLIAIAVPVLNAQGLTIAALNCMSQTNRVQPQ
YLIDQVLPLLRNTANELRNLV
>ACIAD2961 qseB, transcriptional regulator
MTKILIIEDDFMIAESTITLLKYHQFEVEWVNNGFDGLAHLAKQSFDLVL
LDLGLPMMDGMQVLKQIRQKTGVPVLIISARDQLENRVEGLNQGADDYLI
KPYEFDELLARINALLRRTNSKDASSLQQDQVLSNGEVILNVEKHIATFQ
GKEIELSNREWAILIPLMTHPNKIFSKANLEDKLYDFDSEVTSNTIEVYI
HHLRSKLGKNFIRTIRGLGYRLGQTS
>ACIAD3235 recG, ATP-dependent DNA helicase
MIWGDMTSVHHLQGVGTAAASLLEKLNIFTTDDLLFHLPRDYEDRSTVIA
MNQLMVGRSYLLEGEIKSLDFPAGKRKSVAALLQDDCGKVTLRFYHIYKG
LTDKLKSGQRLRVFGEVRVGARGLEMYHPEIQVIHDYTPLPKTQLTAIYP
STEGLTQPKLREYIKQALKQYSDNLPELLPKQFTNGYVLKEALHYIHEPP
LNANMQQLALGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPKFEPSQ
TLAKALLAQLPFQMTSAQKRVSKEIAHDLHQSQPMLRLVQGDVGAGKTLV
AAIAACHALEAGWQVALMAPTEILAEQHYLNFKRWFEPLSIQVGWLSGKQ
KGKARTQAEELIRTGQVQLVMGTHALFQDNVEFAKLGLVIIDEQHRFGVD
QRLALRNKGVDHFTPHQLVMTATPIPRTLAMSAYGDLDTSVIDELPPGRT
PIQTVTIPLDRREEVINRIASNCLEGKQAYWVCTLVEQSETLDAQAAEAT
YQEIRSRFPELKVGLVHGKMKAEEKQNVMQAFKDNQLQLLIATTVIEVGV
DVPNASIMVIENAERLGLSQLHQLRGRVGRGAKASFCVLLYKHPLSQNGQ
ERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMNFRVAKLERDDHL
LVQAHYVAEQVLKDHAQQAEALLNRWLPDAPRYAYV
>ACIAD3068 relA, GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((p)ppGpp synthetase)
MVTVREQLPERLSELAEETTVEHAEKTQLDLASWFKRVSEILDGAELKQL
EKVAQLTLKKVLETTVNHPSNTFTTGIGMADILAHLHVDEDTLSAAVLYR
SVREGIIPIEEVRDKFGEQVHSLVTGTLAMGKLSEMIEKNKRLEDHFNNN
QREHLSGIYKMLIAVTEDVRVVLIKLAERTFTLRELAKSSRERQERVARE
ILTIYAPLAHRLGIAQLKWELEDLAFRYLAPERYKEIATLLNEKRLEREQ
YIQSVILKLKTELSEYGINAEITGRVKHIYSIYRKMKSKNLSFDQLYDIR
ALRVLVQNIPECYHSLGIVHQIWRHIPHQFDDYITNPKANGYRSLHTAVI
AENKSLEVQIRTHEMHEEAELGVCSHFNYKEGSKTTDRSFNHRLHSLRSV
LEHYQERNETTVHKNDDEAENFEELQNFEDFEKIYVFSRDGDIKELPRGS
TVLDFAYHVHTEVGNKCYAARVNQRYVPLTYTLKTGEQVEILTKKDREPN
RDWLVNSLGYIRTARARDKLRHWFRQQDRSKNLEIGKEILNKELSRLAIH
PKSIDLSDYCAHFNVKSGDDVLIALVSGDVSLHSLINQINRQMHLDQDEP
ELVLKPTLNPRASHTLSAHGILIDGLDNVELHIAQCCQPVHGESIGGYIT
LNRGVSIHKVGCPDYQRMIKNEPERAVEADWEMQPTRGQSVQIVIDAYDR
RGLLKDLTQVIFSDQINIRQVNTISEADGIANMKLLIEVKGLAQLSRLLA
RLEQQPGIISARRLIQGN
>ACIAD1314 rhlB, ATP-dependent RNA helicase (DEAD box)
MASGFGTLNLHPQLKQAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTG
TGKTAAFLISVINDLLNNPIQEQRYRGEVRALILAPTRELALQIESDARE
LTRFTDLNVLTLVGGVDFDKQKKPLNEKFIDILVATPGRLIDFVEQKEVW
LDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMFSATFSYDV
LNLARQWLFEPVTVEIEPEQKTNNDVEQRVYMVAKQDKYRLLQDILRDEP
IDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQG
KNNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTQGV
SISFLSEDDAFYLPEIEKAIGKKLPLTRLEGYC
>ACIAD3038 rho, transcription termination factor
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIF
GDGVLEILSDGFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGT
IRPPKEGERYFALLKVNQINYDTPENSRNKILFENLTPLFPTEQLVMELG
NGTTEDLTTRVVDLIAPIGKGQRSIIVAPPKAGKTMLLQSIAQSIVRNNP
EVFLIVLLIDERPEEVTEMERTVRGEVVASTFDESPARHVQVAEMVIEKA
KRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIA
EKRVFPAMNIKKSGTRREERLMDEDNLRKVWILRKLLHPMDELAAMEFLL
DRMKETKTNDDFFDQMKRKAAN
>ACIAD2581 rnc, ribonuclease III, ds RNA
MIKTQSKLSDPRLQSRIGYEFKQLELLQLALTHRSVSHKYNYERLEFLGD
SLLGMIIANYLYQAYPHENEGRLTRMRATLVRQEALGKIANDLKLSRCLI
LSTGELKSGGHHRESILADTVEAIIGAIYVDSNDLNLLKNIVLKWYIPYL
DHIEPTDQLKDPKSRLQEYLQARKKPLPVYEVVDIQGDAPNQHFKVVCLV
EGLPRVMGEGSSRRFAEQTAAAEILKLLEQ
>ACIAD3179 rnr, exoribonuclease R
MLNLSSIMKPNEIMKNWIDPEAKAEAERYDNPIPSRTLILTTLEQLDLPQ
SHAELVDHFDIHDQKSIDALSHRLIAMVRDGQLSKDGFKFQPIGEQPTFD
ATVYINNKGFGSAHIDGQNDLLLPERELRLVFNGDRVKVRQTSVDRKGKA
WGFITEVTQHRVKQLIGKLAVHEGEYFLQPSAPNAHQPIPLEKELIEHAQ
AKVGENLRVAIDDYPTREEFSTGHIIQSMSDKADTEIIIPQTILEFGLPY
EFPEEVVKDAESFKEPSKKDIEGRIDLRDLPLVTIDGEDARDFDDAVYAE
KRSGGGYRVVVAIADVSHYVRLGKPLDDEAQERGTSVYFPHFVLPMLPEA
LSNGLCSLNPHVDRLCMVCDLKLSRAGRVMSYEFYPSVMHSKARLTYTQV
GNYFDGQTDAIPDDKNIQKSLNTLFQLYQTLKGLRAKRHAMEFETIETYM
TFDELGGIKEILPRTRNEAHKLIEECMLLANVAAAEFSLQHDIPMLYRVH
EAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQRVIEATKDRIDAPSIHAV
LLRSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLQQ
KPYPLSGAALDDAGEQFSRTERRADEASRSVTTWLKCHYMKQHLGEEFIG
IISAVTEFGLFVTLKDLYVDGMIHVSQLGDDFFLYDQASQSLVGQNRGQI
FGLGDEVKIKVAAVNLDERKIDFELMQQITHAGRVIRQKAPRSSKTQATE
QVFNVPSETTSTQERDTRKKEKSKSKPSSYAKKSAKKSSPASVSKPVKEK
KKVKVKKKKSNAKPKSE
>ACIAD3194 rpoA, RNA polymerase, alpha subunit
MTRTANEFLTPQAIKVEAVSGTSAKVILEPLERGFGHTLGNALRRILLSS
LPGAAVVEVEIEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYL
TLEKQGPGDITAADLRLPHNVEVVNPEHLIGTLSASGSIKMRLKVSQGRG
YETSDSRFPEGETRPVGRLQLDASYSPIKRVSYTVENARVEQRTDLDKLV
IDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQAPVAQEPREEVDPI
LLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
>ACIAD0307 rpoB, DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit)
MAYSYTEKKRIRKNFGKLPSVMDAPYLLSIQVDSYRTFLQDGKSPKNRED
IGLQAAFRSVFPIESYSGNAALEFVEYGLGKPEFDVRECILRGSTYAAPM
RVKIRLIIKDRETKSIKDVREQEVYMGEIPLMTENGTFVINGTERVIVSQ
LHRSPGVFFDHDKGKTHSSGKVLYSARIIPYRGSWLDFEFDAKDLVYVRI
DRRRKLLASVILRALGYNNAQILDLFYEKVPVYLDFGSYQIDLVPERLRG
EMAQFDIADNDGKVIVEQGKRINARHVRQMEASGLTKLSVPDEYLYERIT
AEDITLRDGDVIAANTLLSHEIMVKLAEGGVKQFNILYTNDIDHGSFVAD
TLRADTTMGREDALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSP
VGRMKFNRRLGRPYEVGTDQKSREVEGILSNEDIIDVLRTLVEIRNGKGE
VDDIDHLGNRRVRSVGEMTENQFRVGLVRVERAVKERLSQAETDNLSPQD
LINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRE
RAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVSDDVEYLSAIEEVGTVIAQADSAVDADGHLMEEMVSVRHQGE
FVRMPPEKVTHMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVP
TLLADKPLVGTGMEANVARDSGVCVIAKRGGMIEFVDASRVVIRVNEEEM
IAGEAGVDIYNLIKYTRSNQNTCINQKVLVNLGDKVGRGDVLADGPSTDG
GELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSIHIQELSCVAR
DTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEK
DDRALAIEKAQLDAYRKDLKEEYKIFEEAARERIVRLLNGQESNGGGTTK
RGDKLSDDVLSGLELVDLLDIQPTDEGIAERLSQIQVFLKEKSAEIDEKF
AEKKRKLATGDELTTGVLKVVKVYLAVKRRIQPGDKMAGRHGNKGVVSNI
LPVEDMPHDANGVPVDVVLNPLGVPSRMNVGQILETHLGLAAKGLGEQID
KMLQQQRTIAELRIFLDKIYNKVGGEQEELDTLTDEEILVLAGNLRKGVP
LATPVFDGAEEGQIKELLELAELPRTGQQILFDGRTGEQFDRPVTVGYMY
MLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAY
GAAYTLQEMLTVKSDDVEGRTRIYKNIVDGNHYMDPGMPESFNVLTKEIR
SLGINIELKNGD
>ACIAD0308 rpoC, DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)
MTQPSERMLLGIRRNKLKDLLDIMRKKTDSDGHTPIEFDRIRIGLASPEM
IKSWSHGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRMK
YKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIWFLKSLPSRIGLLLD
MTLRDIERVLYFESYVVTDPGMTPLEKYQLLTDEEYFNALEEHGDEFSAK
MGAEAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASKRLKLMEAFKE
SNNKPEWMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRL
KRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLAD
MIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKP
FIFAKLQASGQATTIKAAKKMVERETPEVWDVLANVIRQHPVMLNRAPTL
HRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMMFAD
THEVNRALATGQVAIHARVKVRVHQTVINEDGQREKQTIVVDTTPGRCLL
WEVVPEGLSFEMINLEMTKKNISKLINSCYRKLGLKDTVIFADQLMYLGF
RQATRSGVSVGMEDMVIPPQKQAIIDKAETEVREIEEQFEQGFVTAGERY
NKVVDIWARTNDQVAKAMMDNLSFTNVKNKQGQDEKQKSFNSIYMMSDSG
ARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTMGGLVMTPFIQGG
DVIEPLRDRVLGRVTAEDVRRASDNEIVLPRGTLIDEKIAAQLEEAGVDE
VKVRSVIACESTFGVCAKCYGRDLARGHQVNPGESVGVMAAQSIGEPGTQ
LTMRTFHVGGAASRTSAANSVQVRNKGTVRFHNVKTVQHAKGHLVSVSRS
GEIGIADELGRERERYKLPYGASILIKDGEAVEAGGIVATWDPHTHPLVT
EVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLRPAIV
LDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVLGRVPQETSRTRDITGGL
PRVADLFEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEE
LIPKWRTINVFEGEHVNRGETISDGPQNPHDILRLKGEVALTNYIVNEVQ
DVYRLQGVKINDKHIEVIVRQMLRKVDITDGGDTSFIKGEQVDYIRVVQE
NQAVLAQNKFPAKFERQLMGITKASLSTDSFISAASFQETTRVLTEAAVT
GKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHNDFSEV
DQAFSQALNQEQF
>ACIAD2925 rpoD, sigma D (sigma 70) factor of RNA polymerase , major sigma factor during exponential growth
MSDMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQML
QDVGIPVHERAPESDDTMFGDSTEADEVAEEEAAAVLASVENEPGRTTDP
VRMYMREMGTVELLTREGEISIAKRIEEGIRDVLHSIAYWPNAVEVVLQE
YNDYVTGERRLADILSGYLDPETDDDIPEVLEEEAELEEDDESTSKTTTK
DVKLDDDDEEEEESEGDDDSEGDSGPDPEIAKVRFEELEAAWKNTKTVIE
KHGRNSEEANAALESLATVFMMFKFTPRLFDIISEMIRGTHENIRSNERE
VMRYAVRRGRMDRTQFRTSFPGQESNPAWLEEQIAKAPNESKAYLEKVRP
DIQAFQQKIAEIEQDLNLNVREIKEIAKRMAVGEAKARRAKKEMVEANLR
LVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWI
RQAITRSIADQARTIRIPVHMIETINKINRVSRQLLQEMGREPTPEELGE
RLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSNITSPVDAA
TSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRE
RIRQIEAKALRKLRHPSRSEHLRSFLEND
>ACIAD1311 rpoH, sigma H (sigma 32) factor of RNA polymerase
MSDSSNQLMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAERYYYDQD
LDAAKMLVMSHLRFVVHIARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPN
MGVRLVSFAVHWIKAEIHEYVIRNWRIVKIATTKAQRKLFFNLRSLKKSS
KKLTLEEAQSIANDLNVTPEQVLEMEGRLTAYDAAFETQGDDDDDSSTHV
APALYLEDNRYDPARLAENDDYEEQSSTALHEAMNQLDDRSRNILQRRWL
DDDKSTLHELAAEYNVSAERIRQLEKNAMEKIKVAMSAG
>ACIAD0657 rpoN, RNA polymerase sigma-54 factor
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKI
EDEGTAESLTHLENKESRDLTQDLNADHLPNDLPVDTDWDDVYTHQSTAL
ASPEYEEREDNRQAEHTLKEHILAQVNLLHFSTVDRLIAYCVVDCLDEKG
FLDAEIEEIIEAAQYLLSEAGLEEEIEADEVMVVLKHIQRLDPVGVGSKN
LAECLKVQLDVLDVFTPLRNEALSLLKYYELLVSNDLNKLLKSTNLTMLQ
VKEAIELLKTLKPYPGLDFEAQDSDYQVPDVVVTKKDQSWQVQLNPDIMP
KLRINSFYSNMIRRADQSDGNMYLRNQMLEAKNFIKSIDERHKTLLKVAT
CIVEHQRNFFEIGPEGMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTSGGECSSTAIRARIKKMISAENPRKPLSDNIIANM
LKDEGIDVARRTVAKYRESLHIPSSSERKVLI
>ACIAD3325 rpoZ, RNA polymerase, omega subunit
MARVTVEDCLDHVDNRFELVLVASKRARQLARQGIEPTVEWDNDKPTVVS
LREIAEGHVTKDILKQRDQDYQTSSLDLALSANSLNLEGFSFQ
>ACIAD0726 rstA, response regulator (activator) in two-component regulatory system with RstB (OmpR family)
MSQEEKLPKILIVEDDERLARLTQEYLIRNGLEVGVETDGNRAIRRIISE
QPDLVVLDVMLPGADGLTVCREVRPHYHQPILMLTARTEDMDQVLGLEMG
ADDYVAKPVQPRVLLARIRALLRRTDKTVEDEVAQRIEFDDLVIDNGGRS
VTLNGELVDFTSAEYDLLWLLASNAGRILSREDIFERLRGIEYDGQDRSI
DVRISRIRPKIGDDPENPKRIKTVRSKGYLFVKETNGL
>ACIAD1425 salR, transcriptional regulator (LysR family)
MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFER
TQYGVEATKLSHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSD
IGEICLLPTLIEYLRAHAPKIKIEVEEIKIDQVEKWLIEGFIDVAVFNST
HLEFKHLEYETLFLERYVALVNMNHPRIRSTLSFDAYLNESHVAIKSSTG
HTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTLPSRAAQQYLN
QSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL
>ACIAD3082 soxR, transcriptional activator for superoxide response, contains iron-sulfur center for redox-sensing (MerR family)
MKQSNQENLGQQFITIGELAKRSGVSVPTIRFYEAKQLIWSIRTNGNQRR
YLRAMLRRIAIIKVAQLVGISLEELKQAFSVLPDRKMASKQDWEKMSNLW
KNQLDKKIQTLLQLRQQLDWCIGCGCLSLDQCPLRNPDDHYASQSNGAHF
QRVQYQIEQLDTED
>ACIAD2366 spoOJ, chromosome partitioning protein
MTIKKRGLAKGRGLDALLGSIQKEKLQLEAQAIDHGQLKQIDVNLLKRGE
YQPRRFIQEQDLKELAASIEKHGVMQPIVIRPIQDEQYAYEIIAGERRWR
AAQLAGLKEVPAIVRDLNDQVAIALALIENIQRQDLNPIDQALALQRFHD
EFGLSHQEIAETVGKARTTVSNLLRLLSLDDVIKDFMQEGQLDMGHARAI
LALKAKDQIAIAKVVIEKNLSVRQTEQLVRDWNAPKQEKPKAQVAPDIEQ
LTHRLSERFGANVKIDHNKQGKGKLVIQYHSLDELDGILNICLPDV
>ACIAD2729 umuD, component of DNA polymerase V
MLGGLMSQQNKNEHGGARTNAGRKAKYQEPTKVIRVPESQVAFIKRWLLD
NVKTDNLIDFNSALKVQAIQPNPTKIYQIPLATERVAAGLPSPAQEHVEQ
SLDLNEYLVRNENATFIVKANSLSMLDAGIDIDDPLIVDRSITAKAGDIV
IAMVDNEFTVKRLMIDHHFHPPKVWLKAENPDFQNIYIDEGQELVIWGVV
TYNLKPMR
>ACIAD1095 ureG, urease accessory protein
MTERSPLRVGIGGPVGSGKTALTLNLCRALRNKYNMAVVTNDIYTKEDSN
FLTRNEAMTPDRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELI
IIESGGDNLAATFSPELSDLTLYVIDVAGGEKIPRKGGPGITKSDLLIIN
KTDLAPMVGANLDVMEQDAKRMRGEKPFLFSNMKTEDGLTQIIEFIEKQG
LFKA
>ACIAD0978 vanR, transcriptional regulator for ferulate or vanillate catabolism (GntR family)
MSSGHQVLIKLRKMIIDGELEGGSRIAEIPTAELLGVSRQPIRMAFRLLE
QEGLLIKNPTRGYVVREISDELVHDALEVRGVLEGLAAKTIAEQGLTEQQ
KNILHECIEETEKLFNGRNEFGDEELEKYHHYNVIFHDTIIEGAKNIALM
QALAKNNQLPLASAQAITYDQNRALSEYRRLHYAHLQHCSIYNALVNRQA
GRAENLMREHSSVVVLGETVRQILADAE