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COG category: Transcription
Organism: Dechloromonas aromatica RCB, RCB

Number of genes found: 238

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Dechloromonas aromatica RCB, RCB
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Daro_1644 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Regulatory protein, LysR:LysR, substrate-binding protein; chromosome CDS1768791 909 - 0.588559
NA Daro_1779 Helicase c2:DEAD/DEAH box helicase, N-terminalSubName: Full=Helicase c2:DEAD/DEAH box helicase, N-terminal; chromosome CDS1918614 1926 + 0.629283
NA Daro_3573 GCN5-related N-acetyltransferaseSubName: Full=GCN5-related N-acetyltransferase; chromosome CDS3827877 450 + 0.608889
NA Daro_1388 Cold-shock protein, DNA-bindingSubName: Full=Cold-shock DNA-binding protein family; chromosome CDS1518422 204 - 0.514706
NA Daro_3567 Phosphate regulon transcriptional regulatory protein phoBSubName: Full=Phosphate regulon transcriptional regulatory protein phoB; chromosome CDS3820914 687 + 0.649199
NA Daro_1939 Peptidase S24, LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS2088163 606 + 0.584158
NA Daro_2129 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Regulatory protein, LysR:LysR, substrate-binding protein; chromosome CDS2299854 936 - 0.583333
NA Daro_2286 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2469628 771 - 0.631647
NA Daro_1650 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1776056 444 - 0.560811
NA Daro_0017 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS21218 915 + 0.62623
NA Daro_1581 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS1699425 672 - 0.577381
NA Daro_4007 regulatory protein GntR, HTH:GntR, C-terminalSubName: Full=Transcriptional regulator, GntR family; chromosome CDS4307505 702 + 0.594017
NA Daro_0313 RNA polymerase Rpb1, domain 4RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS356857 4212 + 0.578348
NA Daro_1079 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS1182242 693 - 0.58153
NA Daro_3553 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; chromosome CDS3806252 1155 - 0.572294
NA Daro_0264 regulatory protein, LuxR:Response regulator receiverSubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS305705 666 + 0.618619
NA Daro_2245 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2427903 945 - 0.665608
NA Daro_0102 regulatory protein, MerRSubName: Full=Regulatory protein, MerR; chromosome CDS118650 393 - 0.610687
NA Daro_0898 regulatory protein GntR, HTH:GntR, C-terminalSubName: Full=Transcriptional regulator, GntR family; chromosome CDS971767 651 - 0.519201
NA Daro_2504 BRO family proteinSubName: Full=BRO family protein; chromosome CDS2704300 177 + 0.576271
NA Daro_2590 Sigma-70 region 2SubName: Full=RNA polymerase, sigma subunit, ECF family; chromosome CDS2791110 573 - 0.577661
NA Daro_1572 regulatory protein, LuxR:Response regulator receiverSubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS1685785 657 - 0.557078
NA Daro_2453 Transcription termination factor NusA:Transcription termination factor NusA, C-terminal duplicationSubName: Full=NusA antitermination factor; chromosome CDS2654472 1473 - 0.547183
NA Daro_3739 NusB antitermination factorRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS4018176 492 + 0.609756
NA Daro_0694 regulatory protein, MarRSubName: Full=Regulatory protein, MarR; chromosome CDS763821 516 - 0.523256
NA Daro_2950 Sigma-70 region 2SubName: Full=RNA polymerase, sigma subunit, SigZ; chromosome CDS3185936 543 - 0.541436
NA Daro_1210 regulatory protein, TetRSubName: Full=Regulatory protein, TetR; chromosome CDS1314868 624 - 0.580128
NA Daro_2219 ParB-like nucleaseSubName: Full=ParB-like nuclease; chromosome CDS2396351 2004 - 0.656188
NA Daro_1674 regulatory protein, TetRSubName: Full=Transcriptional regulator, TetR family; Flags: Precursor; chromosome CDS1799787 606 - 0.570957
NA Daro_1528 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS1636506 897 - 0.651059
NA Daro_1126 Prokaryotic transcription elongation factor GreBRecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; chromosome CDS1226825 558 + 0.523297
NA Daro_1559 Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Metal-dependent phosphohydrolase, HD subdomain; Flags: Precursor; chromosome CDS1672417 2097 + 0.559847
NA Daro_2135 regulatory protein, ArsRSubName: Full=Transcriptional regulator, ArsR family; chromosome CDS2304451 294 + 0.540816
NA Daro_0604 Protein of unknown function DUF193RecName: Full=Transcriptional repressor NrdR; chromosome CDS674566 465 + 0.580645
NA Daro_3844 RNA polymerase, omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS4136875 207 - 0.63285
NA Daro_3310 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminalSubName: Full=Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; chromosome CDS3560036 1524 + 0.633202
NA Daro_2495 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Regulatory protein, LysR:LysR, substrate-binding protein; chromosome CDS2694136 879 - 0.610922
NA Daro_0219 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS239927 735 + 0.572789
NA Daro_1965 Transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS2111293 3444 - 0.646922
NA Daro_0401 regulatory protein, ArsRSubName: Full=Regulatory protein, ArsR; chromosome CDS443517 312 + 0.567308
NA Daro_0091 Negative transcriptional regulatorSubName: Full=Negative transcriptional regulator; chromosome CDS108017 618 - 0.622977
NA Daro_0969 Response regulator receiverSubName: Full=Response regulator receiver; chromosome CDS1053973 567 - 0.59612
NA Daro_2744 RNA binding S1SubName: Full=RNA binding S1; chromosome CDS2936427 2319 + 0.632169
NA Daro_1424 Urease accessory protein UreGRecName: Full=Urease accessory protein UreG; chromosome CDS1551671 606 - 0.615512
NA Daro_1932 regulatory protein GntR, HTH:Aminotransferase, class I and IISubName: Full=Transcriptional regulator, GntR family; chromosome CDS2076951 1431 + 0.614955
NA Daro_3831 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS4121734 1008 + 0.619048
NA Daro_2960 Response regulator receiverSubName: Full=Response regulator receiver; chromosome CDS3199487 573 + 0.588133
NA Daro_1527 regulatory protein, TetRSubName: Full=Transcriptional regulator, TetR family; chromosome CDS1635537 639 - 0.532081
NA Daro_1367 regulatory protein, LuxRSubName: Full=Regulatory protein, LuxR; chromosome CDS1489741 828 - 0.549517
NA Daro_1897 Metal-dependent phosphohydrolase, HD subdomain:CHASE2SubName: Full=Metal-dependent phosphohydrolase, HD subdomain:CHASE2; chromosome CDS2039322 2016 - 0.610615
NA Daro_3100 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS3342877 903 - 0.6268
NA Daro_2710 GCN5-related N-acetyltransferaseSubName: Full=GCN5-related N-acetyltransferase; chromosome CDS2903038 528 + 0.617424
NA Daro_2546 Helicase, C-terminalSubName: Full=Helicase, C-terminal; chromosome CDS2740380 5010 + 0.639321
NA Daro_2972 3'-5' exoribonuclease, VacB and RNase II:Ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS3208863 2418 - 0.590157
NA Daro_1525 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS1633311 942 + 0.605096
NA Daro_2799 Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Metal-dependent phosphohydrolase, HD subdomain; Flags: Precursor; chromosome CDS3004792 1269 - 0.5855
NA Daro_1480 Helix-turn-helix motifSubName: Full=Helix-turn-helix motif protein; chromosome CDS1600523 279 - 0.666667
NA Daro_2910 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS3133813 942 - 0.591295
NA Daro_0940 Prokaryotic transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1021864 519 + 0.560694
NA Daro_2567 Helix-turn-helix motifSubName: Full=Helix-turn-helix motif protein; chromosome CDS2766430 363 - 0.553719
NA Daro_3005 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; chromosome CDS3242897 1086 + 0.590239
NA Daro_1911 Helix-turn-helix, AraC typeSubName: Full=Transcriptional regulator, AraC family; chromosome CDS2054177 903 - 0.632337
NA Daro_3679 Response regulator receiver:LytTr DNA-binding regionSubName: Full=Transcriptional regulator, LytR/AlgR family; chromosome CDS3954210 789 - 0.608365
NA Daro_0429 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS472916 672 + 0.60119
NA Daro_0384 regulatory proteins, IclRSubName: Full=Transcriptional regulator, IclR family; chromosome CDS416303 798 - 0.646617
NA Daro_1063 regulatory protein GntR, HTH:Aminotransferase, class I and IISubName: Full=Transcriptional regulator, GntR family; chromosome CDS1164940 1413 + 0.631281
NA Daro_2159 regulatory protein, TetRSubName: Full=Transcriptional regulator, TetR family; chromosome CDS2329233 618 - 0.584142
NA Daro_3947 Helix-turn-helix protein, CopGRecName: Full=Putative nickel-responsive regulator; chromosome CDS4244938 465 - 0.602151
NA Daro_3580 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; Flags: Precursor; chromosome CDS3835162 885 - 0.576271
NA Daro_3569 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS3823255 441 + 0.587302
NA Daro_1537 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS1644217 924 + 0.569264
NA Daro_0487 regulatory protein, MerRSubName: Full=Regulatory protein, MerR; chromosome CDS549879 906 - 0.649007
NA Daro_2565 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2764337 954 - 0.622642
NA Daro_0292 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS333418 909 - 0.645765
NA Daro_1977 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2127232 321 + 0.551402
NA Daro_2274 Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Metal-dependent phosphohydrolase, HD subdomain; Flags: Precursor; chromosome CDS2461272 1329 + 0.586155
NA Daro_1632 Response regulator receiverSubName: Full=Response regulator receiver; chromosome CDS1754219 372 + 0.551075
NA Daro_1820 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminalSubName: Full=Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal; Flags: Precursor; chromosome CDS1956783 1344 - 0.65625
NA Daro_1487 Helix-turn-helix, Fis-type:Nif-specific regulatory proteinSubName: Full=Helix-turn-helix, Fis-type:Nif-specific regulatory protein; chromosome CDS1603477 1650 - 0.638182
NA Daro_2866 regulatory protein GntR, HTH:UbiC transcription regulator-associatedSubName: Full=Transcriptional regulator, GntR family; chromosome CDS3085828 756 - 0.572751
NA Daro_0356 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS387480 2052 + 0.627193
NA Daro_1118 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminalRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1220106 1821 - 0.632619
NA Daro_0521 Sigma-70 region 2:Sigma-70 region 4SubName: Full=Sigma-70 region 2:Sigma-70 region 4; chromosome CDS581892 501 + 0.658683
NA Daro_3881 conserved hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS4174801 687 - 0.567686
NA Daro_0110 Response regulator receiverSubName: Full=Response regulator receiver; chromosome CDS126495 891 + 0.567901
NA Daro_1322 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1440346 255 - 0.470588
NA Daro_3521 BRO, N-terminalSubName: Full=BRO, N-terminal; chromosome CDS3771025 600 - 0.543333
NA Daro_2902 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; chromosome CDS3127080 1053 - 0.552707
NA Daro_2247 Helix-turn-helix motifSubName: Full=Helix-turn-helix motif protein; chromosome CDS2430040 360 - 0.611111
NA Daro_1948 Protein of unknown function UPF0074SubName: Full=Transcriptional regulator, BadM/Rrf2 family; chromosome CDS2101069 504 + 0.571429
NA Daro_0455 Helix-turn-helix, Fis-typeSubName: Full=Helix-turn-helix, Fis-type; chromosome CDS497529 1407 + 0.633973
NA Daro_2029 Ribonuclease III, bacterialRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS2181393 669 + 0.532138
NA Daro_1916 putative nucleotide-binding protein containing TIR-like domainSubName: Full=Putative nucleotide-binding protein containing TIR-like domain; chromosome CDS2058223 834 - 0.416067
NA Daro_0925 Cyclic nucleotide-binding:Protein kinaseSubName: Full=Cyclic nucleotide-binding:Protein kinase; chromosome CDS1002879 1365 + 0.578755
NA Daro_0386 Phenylacetic acid degradation operon negative regulatory protein paaXSubName: Full=Phenylacetic acid degradation operon negative regulatory protein paaX; chromosome CDS417912 1059 - 0.646837
NA Daro_3349 Response regulator receiverSubName: Full=Response regulator receiver; chromosome CDS3604929 381 - 0.643045
NA Daro_0627 probable transcription regulator proteinSubName: Full=Cell division inhibitor SlmA; chromosome CDS692211 609 - 0.586207
NA Daro_2343 regulatory protein, LuxR:Response regulator receiverSubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS2523753 636 + 0.529874
NA Daro_2542 ParB-like partition proteinSubName: Full=ParB family protein; chromosome CDS2735695 1764 - 0.657596
NA Daro_0552 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS613940 912 - 0.66557
NA Daro_3834 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS4124636 888 + 0.556306
NA Daro_0224 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS248540 732 - 0.639344
NA Daro_2256 Cd(II)/Pb(II)-responsive transcriptional regulatorSubName: Full=Transcriptional regulator, MerR family; chromosome CDS2442196 435 - 0.556322
NA Daro_1445 regulatory protein, LuxR:Response regulator receiverSubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS1572557 927 - 0.666667
NA Daro_1392 Helix-turn-helix, Fis-typeSubName: Full=Transcriptional regulator, LysR family; chromosome CDS1521871 912 + 0.633772
NA Daro_2809 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS3016248 948 + 0.626582
NA Daro_0037 ROKSubName: Full=N-acetylglucosamine kinase; EC=2.7.1.59; chromosome CDS43448 894 - 0.62528
NA Daro_3014 ParB-like partition proteinSubName: Full=ParB family protein; chromosome CDS3258444 921 + 0.606949
NA Daro_3135 regulatory protein, ArsRSubName: Full=Transcriptional regulator, ArsR family; chromosome CDS3378442 321 - 0.566978
NA Daro_3638 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS3911849 951 + 0.64143
NA Daro_1767 regulatory protein GntR, HTH:GntR, C-terminalSubName: Full=Transcriptional regulator, GntR family; chromosome CDS1900919 768 + 0.634115
NA Daro_3915 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS4209158 906 + 0.639073
NA Daro_0826 Protein kinase:Protein phosphatase 2C-likeSubName: Full=Protein kinase:Protein phosphatase 2C-like protein; chromosome CDS897130 1689 + 0.640024
NA Daro_1832 Sigma-70 region 2SubName: Full=Sigma-70 region 2; chromosome CDS1970701 498 + 0.586345
NA Daro_1332 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1449818 537 + 0.389199
NA Daro_0970 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; chromosome CDS1054536 1317 - 0.628702
NA Daro_0747 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS818997 285 - 0.547368
NA Daro_0235 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS264883 360 - 0.594444
NA Daro_0562 Excisionase/Xis, DNA-bindingSubName: Full=Excisionase/Xis, DNA-binding protein; chromosome CDS625794 588 - 0.610544
NA Daro_0242 Helix-turn-helix, Fis-typeSubName: Full=Transcriptional regulator, AraC family; chromosome CDS272596 1068 - 0.649813
NA Daro_1136 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS1242138 921 - 0.647123
NA Daro_1100 regulatory protein, TetRSubName: Full=Transcriptional regulator, TetR family; chromosome CDS1203131 585 - 0.623932
NA Daro_1890 Helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminalSubName: Full=Transcriptional regulator, AraC family; chromosome CDS2030224 933 - 0.614148
NA Daro_0522 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS582389 795 + 0.651572
NA Daro_0834 regulatory protein, LuxR:Response regulator receiverSubName: Full=Regulatory protein, LuxR:Response regulator receiver; chromosome CDS906575 666 + 0.561562
NA Daro_0743 Sigma-70 region 4RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; chromosome CDS816228 747 + 0.555556
NA Daro_3799 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS4084095 903 + 0.654485
NA Daro_0698 regulatory protein, ArsRSubName: Full=Transcriptional regulator, ArsR family; chromosome CDS767060 336 + 0.616071
NA Daro_4024 regulatory protein GntR, HTH:GntR, C-terminalSubName: Full=Transcriptional regulator, GntR family; chromosome CDS4323065 720 + 0.636111
NA Daro_3269 regulatory proteins, AsnC/LrpSubName: Full=Transcriptional regulator, AsnC family; chromosome CDS3521000 969 - 0.629515
NA Daro_3392 Cold-shock protein, DNA-bindingSubName: Full=Cold-shock DNA-binding protein family; chromosome CDS3645125 207 - 0.531401
NA Daro_2695 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminalSubName: Full=Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal; chromosome CDS2890657 1515 - 0.547855
NA Daro_3150 Sigma-70 region 2SubName: Full=RNA polymerase, sigma-24 subunit, RpoE; chromosome CDS3388543 603 - 0.608624
NA Daro_2634 Sigma-70 region 2RecName: Full=RNA polymerase sigma factor; chromosome CDS2834071 558 - 0.607527
NA Daro_1070 Helix-turn-helix, AraC type:ThiJ/PfpISubName: Full=Transcriptional regulator, AraC family with amidase-like domain; chromosome CDS1172458 996 + 0.623494
NA Daro_3666 Helix-turn-helix, Fis-typeSubName: Full=Helix-turn-helix, Fis-type; chromosome CDS3940789 234 + 0.564103
NA Daro_0972 PAS:GGDEFSubName: Full=Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); chromosome CDS1059402 2985 - 0.622781
NA Daro_2513 BRO, N-terminalSubName: Full=BRO, N-terminal; chromosome CDS2710179 519 + 0.55106
NA Daro_0930 Negative regulator of class I heat shock proteinRecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS1008651 1029 - 0.60447
NA Daro_0076 Helix-turn-helix protein, CopGRecName: Full=Putative nickel-responsive regulator; chromosome CDS94027 456 - 0.611842
NA Daro_0307 transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS349442 534 + 0.541198
NA Daro_2281 regulatory protein, ArsRSubName: Full=Transcriptional regulator, ArsR family; chromosome CDS2466403 351 - 0.606838
NA Daro_2124 Sigma-70 region 2:Sigma-70 region 4SubName: Full=Sigma-70 region 2:Sigma-70 region 4; chromosome CDS2295210 681 + 0.612335
NA Daro_2566 Prophage CP4-57 regulatorySubName: Full=Prophage CP4-57 regulatory; chromosome CDS2765529 276 - 0.619565
NA Daro_2521 Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4:Sigma-70 region 1.2RecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; chromosome CDS2719020 930 - 0.578495
NA Daro_0856 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS928886 309 - 0.559871
NA Daro_1400 regulatory protein, LuxR:Response regulator receiverSubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS1529514 651 + 0.528418
NA Daro_3458 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; chromosome CDS3706019 1098 - 0.570127
NA Daro_0007 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Response regulator receiver modulated metal dependent phosphohydrolase; chromosome CDS7338 1140 - 0.580702
NA Daro_3893 Protein of unknown function DUF179RecName: Full=UPF0301 protein Daro_3893; chromosome CDS4183673 561 - 0.568627
NA Daro_3176 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS3414577 681 + 0.660793
NA Daro_2259 Heavy metal response regulatorSubName: Full=Two component heavy metal response transcriptional regulator, winged helix family; Flags: Precursor; chromosome CDS2446519 678 - 0.610619
NA Daro_3267 regulatory proteins, AsnC/LrpSubName: Full=Transcriptional regulator, AsnC family; chromosome CDS3520076 477 - 0.612159
NA Daro_1993 CHASE2:Stage II sporulation ESubName: Full=CHASE2:Stage II sporulation E; Flags: Precursor; chromosome CDS2143768 2127 - 0.594734
NA Daro_3541 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3792252 615 + 0.634146
NA Daro_2093 Response regulator receiver:LytTr DNA-binding regionSubName: Full=Transcriptional regulator, LytR/AlgR family; chromosome CDS2249600 714 - 0.588235
NA Daro_3268 NirG protein precursorSubName: Full=Transcriptional regulator, AsnC family; chromosome CDS3520549 459 - 0.610022
NA Daro_0797 BRO, N-terminalSubName: Full=BRO, N-terminal; chromosome CDS863998 336 - 0.52381
NA Daro_0418 GCN5-related N-acetyltransferaseSubName: Full=Acetyltransferase, GNAT family; chromosome CDS459726 555 + 0.623423
NA Daro_3557 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS3811812 693 - 0.598846
NA Daro_2998 Transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS3236431 1260 + 0.587302
NA Daro_1985 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Regulatory protein, LysR:LysR, substrate-binding protein; chromosome CDS2134357 903 + 0.560354
NA Daro_0668 regulatory proteins, IclRSubName: Full=Transcriptional regulator, IclR family; chromosome CDS736879 729 - 0.59808
NA Daro_0704 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS771712 681 + 0.610866
NA Daro_1886 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerizationSubName: Full=Transcriptional regulator, AraC family; chromosome CDS2026546 822 + 0.670316
NA Daro_2633 Cd(II)/Pb(II)-responsive transcriptional regulatorSubName: Full=Cd(II)/Pb(II)-responsive transcriptional regulator; chromosome CDS2833324 489 + 0.566462
NA Daro_1980 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS2129688 732 - 0.637978
NA Daro_1847 Silent information regulator protein Sir2SubName: Full=Silent information regulator protein Sir2; chromosome CDS1983935 804 + 0.606965
NA Daro_2456 Prokaryotic chromosome segregation and condensation protein ScpBSubName: Full=Condensin subunit ScpB; chromosome CDS2657543 537 - 0.597765
NA Daro_3756 Bvg accessory factorRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS4039027 717 - 0.60251
NA Daro_3430 hypothetical proteinSubName: Full=Uncharacterized protein; Flags: Precursor; chromosome CDS3683032 819 + 0.465201
NA Daro_3843 RelA/SpoT proteinSubName: Full=RelA/SpoT protein; chromosome CDS4134700 2154 - 0.600279
NA Daro_1543 regulatory protein, TetRSubName: Full=Transcriptional regulator, TetR family; chromosome CDS1650219 717 + 0.578801
NA Daro_3251 regulatory protein, TetRSubName: Full=Regulatory protein, TetR; chromosome CDS3500564 618 + 0.606796
NA Daro_2474 Heavy metal response regulatorSubName: Full=Heavy metal response regulator; chromosome CDS2673168 672 - 0.598214
NA Daro_0438 Protein kinaseSubName: Full=Protein kinase; chromosome CDS480379 1374 + 0.59607
NA Daro_0512 regulatory proteins, AsnC/LrpSubName: Full=Transcriptional regulator, AsnC family; chromosome CDS573351 477 + 0.563941
NA Daro_1017 Helix-turn-helix, Fis-typeSubName: Full=GAF modulated sigma54 specific transcriptional regulator, Fis family; chromosome CDS1113392 2040 - 0.623529
NA Daro_2782 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerizationSubName: Full=Transcriptional regulator, AraC family; chromosome CDS2984900 966 + 0.552795
NA Daro_2294 Helix-turn-helix motifSubName: Full=Helix-turn-helix motif protein; chromosome CDS2477364 243 + 0.539095
NA Daro_0878 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminalSubName: Full=Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; chromosome CDS950826 1278 + 0.624413
NA Daro_2110 regulatory protein, MarRSubName: Full=Regulatory protein, MarR; Flags: Precursor; chromosome CDS2279424 492 - 0.506098
NA Daro_0610 regulatory protein, ArsRSubName: Full=Transcriptional regulator, ArsR family; chromosome CDS680370 297 + 0.545455
NA Daro_0476 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS536292 960 - 0.677083
NA Daro_3093 Cold-shock protein, DNA-bindingSubName: Full=Cold-shock DNA-binding protein family; chromosome CDS3332489 219 - 0.488584
NA Daro_2827 RelA/SpoT proteinSubName: Full=RelA/SpoT protein; chromosome CDS3035302 2223 - 0.605488
NA Daro_3790 regulatory protein GntR, HTH:GntR, C-terminalSubName: Full=Transcriptional regulator, GntR family; chromosome CDS4076256 708 + 0.637006
NA Daro_1030 regulatory protein, LuxR:Response regulator receiverSubName: Full=Two component transcriptional regulator, LuxR family; chromosome CDS1131274 648 + 0.635802
NA Daro_2815 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS3022429 657 + 0.633181
NA Daro_3909 Ribonuclease IISubName: Full=Ribonuclease II; Flags: Precursor; chromosome CDS4204259 1914 - 0.597179
NA Daro_2792 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS2999545 888 - 0.615991
NA Daro_0526 Sigma-70 region 1.2RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS586121 1974 - 0.599797
NA Daro_3870 SNF2-related:Helicase, C-terminal:SWIM Zn-fingerSubName: Full=SNF2-related:Helicase, C-terminal:SWIM Zn-finger; chromosome CDS4161946 3276 + 0.635531
NA Daro_2670 regulatory protein, MerRSubName: Full=Regulatory protein, MerR; chromosome CDS2867302 378 - 0.526455
NA Daro_1878 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS2020355 690 + 0.626087
NA Daro_2246 Prophage CP4-57 regulatorySubName: Full=Prophage CP4-57 regulatory; Flags: Precursor; chromosome CDS2429105 276 - 0.666667
NA Daro_3978 Hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS4277118 1059 - 0.630784
NA Daro_0312 DNA-directed RNA polymerase, beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS352552 4284 + 0.576097
NA Daro_1342 Helix-turn-helix, AraC typeSubName: Full=Transcriptional regulator, AraC family; chromosome CDS1459048 993 + 0.545821
NA Daro_3146 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS3385439 705 + 0.611347
NA Daro_2702 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2895094 372 - 0.489247
NA Daro_3923 regulatory protein, TetRSubName: Full=Transcriptional regulator, TetR family; chromosome CDS4219500 645 + 0.542636
NA Daro_4149 Sigma-54, DNA-bindingRecName: Full=RNA polymerase sigma-54 factor; chromosome CDS4448008 1470 - 0.580272
NA Daro_1602 Protein kinase:GAFSubName: Full=Protein kinase:GAF; chromosome CDS1718068 2373 + 0.567636
NA Daro_0820 Protein kinase:Protein phosphatase 2C-likeSubName: Full=Serine/threonine protein kinase; chromosome CDS890816 1725 + 0.575652
NA Daro_4106 ParB-like partition proteinSubName: Full=Chromosome segregation DNA-binding protein; chromosome CDS4405966 855 + 0.62807
NA Daro_0789 BRO, N-terminalSubName: Full=BRO, N-terminal; chromosome CDS858341 519 - 0.558767
NA Daro_0345 DNA-directed RNA polymerase, alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS378127 975 + 0.571282
NA Daro_1854 Protein kinase:Leucine-rich repeatSubName: Full=Serine/threonine protein kinase; chromosome CDS1993479 1323 + 0.621315
NA Daro_3076 Sigma-70 region 2:Sigma-70 region 4SubName: Full=RNA polymerase, sigma-24 subunit, RpoE; chromosome CDS3317663 579 + 0.556131
NA Daro_3352 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Response regulator receiver:Transcriptional regulatory protein, C-terminal; chromosome CDS3608606 705 + 0.61844
NA Daro_3200 regulatory protein, LuxRSubName: Full=Transcriptional regulator, LuxR family; chromosome CDS3449805 618 - 0.595469
NA Daro_4080 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS4374526 984 - 0.645325
NA Daro_0687 regulatory protein, ArsRSubName: Full=Transcriptional regulator, ArsR family; chromosome CDS758128 411 + 0.489051
NA Daro_1585 Helix-turn-helix, Fis-typeSubName: Full=Helix-turn-helix, Fis-type; chromosome CDS1702781 534 - 0.588015
NA Daro_2918 Protein of unknown function UPF0074SubName: Full=Transcriptional regulator, BadM/Rrf2 family; chromosome CDS3141977 480 - 0.583333
NA Daro_1311 Helix-turn-helix motifSubName: Full=Helix-turn-helix motif protein; chromosome CDS1425720 822 - 0.526764
NA Daro_1129 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminalSubName: Full=ATP-dependent RNA helicase DbpA; EC=5.99.1.-; chromosome CDS1235629 1401 + 0.610992
NA Daro_0804 regulatory proteins, IclRSubName: Full=Regulatory protein, IclR; chromosome CDS868644 801 - 0.550562
NA Daro_0357 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator; chromosome CDS389521 861 - 0.656214
NA Daro_2022 Sigma-70 region 2:Sigma-70 region 4SubName: Full=RNA polymerase, sigma-24 subunit, RpoE; chromosome CDS2175660 600 + 0.528333
NA Daro_1000 Helix-turn-helix, Fis-typeSubName: Full=GAF modulated sigma54 specific transcriptional regulator, Fis family; chromosome CDS1092748 1986 - 0.638469
NA Daro_4077 regulatory protein, LysR:LysR, substrate-bindingSubName: Full=Transcriptional regulator, LysR family; chromosome CDS4371898 876 + 0.676941
NA Daro_1180 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS1287020 666 + 0.615616
NA Daro_0897 regulatory proteins, IclRSubName: Full=Regulatory protein, IclR; chromosome CDS970899 837 - 0.599761
NA Daro_3285 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainSubName: Full=Response regulator receiver modulated metal dependent phosphohydrolase; chromosome CDS3537581 1089 + 0.600551
NA Daro_2361 Helix-turn-helix, Fis-typeSubName: Full=Transcriptional regulator, AraC family; chromosome CDS2545927 1008 + 0.554563
NA Daro_0191 GCN5-related N-acetyltransferaseSubName: Full=GCN5-related N-acetyltransferase; chromosome CDS209369 507 + 0.558185
NA Daro_3394 BolA-like proteinSubName: Full=Transcriptional regulator, BolA protein family; chromosome CDS3646794 246 - 0.528455
NA Daro_2846 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3062286 330 + 0.609091
NA Daro_2641 regulatory protein, ArsRSubName: Full=Transcriptional regulator, ArsR family; chromosome CDS2839394 339 - 0.560472
NA Daro_0575 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Two component transcriptional regulator, winged helix family; chromosome CDS641979 684 + 0.586257
NA Daro_0006 Silent information regulator protein Sir2SubName: Full=Silent information regulator protein Sir2; chromosome CDS6432 816 - 0.636029
NA Daro_2298 Response regulator receiver:Transcriptional regulatory protein, C-terminalSubName: Full=Two component transcriptional regulator, winged helix family; Flags: Precursor; chromosome CDS2480783 666 - 0.576577
NA Daro_2568 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2766929 762 - 0.585302
NA Daro_3849 Protein kinaseSubName: Full=Serine/threonine protein kinase; chromosome CDS4142869 945 + 0.589418
NA Daro_1520 Sigma-70 region 2SubName: Full=RNA polymerase, sigma subunit, ECF family; chromosome CDS1630305 573 + 0.5637
NA Daro_3837 Sigma-70 region 4RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS4129487 861 + 0.612079