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# Thermobifida fusca YX, YX

>Tfu_1446 putative transcriptional regulator
MRHAETMANTSTRMLRLLSLLQTQRYWSGRELAEQLGVSERTLRRDVDRL
RELGYPVEATRGVAGGYQLRSGTALPPLLLDDEEAVAIAVSLCTAAQSTV
TGVEETAVRALAKVVQVMPPRLSKRVEALRPFTLPALRSNAPAVNAVILT
VLAQTCRDTEILRFTHLARDGTRSLKLVEPHHLVSLWHRWYLIAWDVGRG
DWRTFRVDRITDPEATGARFIPREIPGGDPAEFVRKHSRELPPQYRVVVE
VAAAADTVRRAVGSWGTVEELDGDRCRLTLHTDFFDWPAMLLASLDADFT
VVDPPEFRDYLQACAGRFLRAAESAGPLPSES
>Tfu_0725 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
MSPAAAAAFAPGSLVAGRGREWVVLPSTEEDFVLVRPLNGDEAFTTLLYR
DEVTPAEFPAPSTELSQIGDHVSASLLRTAMRVGCTSPALPLRCLGSIRV
QPRRYQFVPLLLALRMETVRLLIADDVGTGKTVEAALIAKELVERGEARR
MAVVCPPALAEQWQAELRDKFGIEAELVLPSTVRCLERPLRADQSVFKTY
PYTIVSTDFITSEQRRAQFLTHCPDLVIVDEAHTWVNASPTRLRQQRQEL
LRNVAAQQDRHLILVTATPHSGRENAFHDLLGMLTPELAEADCRSRRGRA
LLARHCVRRHRRDIQRFLDQETVFPQGREFRDEKYEWSPAYAEFNAEVLA
YAREAAADPSGTKLQQRVRWWSALALLRSVVSSPAAAAAALRTRSTTFSA
ARSAADVDALARESVYDADSAATEGGDAVPGAAVDPDTLPESTRRRLRAL
AERAEKLQGVEHDAKLRALIATVKGLLADGCDPVVFCRYIPTAHYVAEEL
RQALPKNCAVEAVTSELPPREREDRVAHLAATDRRRVLVATDCLSEGVNL
HELFPAVVHYDMAWNPVRHEQREGRVDRFGQRAKRVRVVTLYGADNGIDG
PVRDVLLRKHRTITAQAGGAVPVPTSSESVLQALAESLLLCGPHPQLGRT
PGLAEASAVLHRERELVSEPAPHQGATFAPSTGDVPDVVEHLERLIPAID
DELGRPRDIASFVARVFTRLGVPVHADAGKLTVPPQSLPPGVRAALGVAD
TAHQDLVFRRDLPAGPHEHVLVRTDPAVRALARYVVETAFEPDPGTRPVV
QRCGVTWTGRVTVRTVLLLVRYRFLLTLPGVDGPRTVVVEEARIRGYRAG
AHGREWLTDAETAALVDTPPDADLPPELVQCHARRAVAELDEIRGDLAEW
GVVRAEQLRHAHYGIRASAGSRGQGLALVPHGRADVVGVYVYLPLGDAP
>Tfu_0548 RNA polymerase sigma-70 factor, ECF subfamily
MPASVGTLLRERSVTATGMARVRFEPLQPYGEVAVATGENRARRPTGLSQ
SQETIEDRAARFERDAMPLLDQLYSAALRMTRNPTDAEDLVQETFTKAFG
SFHQFKEGTNLKAWLYRILTNTFINSYRKKQREPRQAGTEDIEDWQLARA
ASHTSSGLKSAEAEALEHLPDTDVKRALQELPEDFRIAVYLVDVEGFAYK
EAAEIMDTPIGTVMSRLHRGRRQLRSLLEEYALERGFLSVAERESVGAVN
GGKDQR
>Tfu_1605 putative xylose repressor
MVGATEGPAGFQAVRETNLGIVLRTIRTSAPCSRAVVAASTGLTKATVSS
LVAELIDRGLVCETGLVNERRVGRPGMMLTINGSTLVALGLEVNVDYLAL
AALDLLEREVLTRHVAFDARAAGPEECAKQLKTLLLETVADPLLRDRPLL
GVSVAIPALVDVSSGTVTNAPNLGWRNFPLQQRLTELLADTPLAGAPVRV
DNDANLGAVAEYRGGHLARTMDLVYLTGEVGIGAGVLMNGEPLRGASGFA
GEVGHIPLLKDGPACACGQDGCLEALAGLDSILRRAVPDLVPEGPVRGSV
VESLVAETVRRAESGDATAVQALEDAGEWLGRAAATLVNLLNPSAIILGG
YFVPLSPWLLPSCREAMAAYSFAPNSGNCRIEPSTLGLSAAARGGAMALI
DALDTGLLPLPPGSSAA
>Tfu_0646 ATP-dependent DNA helicase RecG
MTDLTESLRVVGDRTAKVLASALGLHTVGDLLRHYPRRYDRRGELTDLDG
LVEGEQVTVLAEVLTCTVRPMRQRRGSILEVVVTDGRGRLSLLFFHRVGW
HRDRLLPGRRGLFAGKVSVYRGRRQLAHPEYELFESDDAIQERARTYADT
LIPIYPATEKITSWKIAKAVATVLDILGDLPDPLPADLRARHGLVSLSEA
YRLIHTPKDWDDVRAARKRLKWDEAFVIQVALAQRRRTAQRQPAQPRPRI
SGGILDAFDANLPFTLTDGQREVGEVISADLASDHPMHRLLQGDVGAGKT
LVALRAMLQVVDAGGQAALLAPTEVLAQQHHRSITEMLGPLARAGQLDGA
EQATRVALLTGSLGAAARREALLDAASGRAGIVIGTHALLQEQVTFADLG
LVVIDEQHRFGVEQRDALRDKSTRGRPHVLVMTATPIPRTVAMTVYGDLD
VVALRQLPAGRSPIATHVVPSRDKPHYLARAWERIREEVAQGRQAYIVCP
RIGGEAEDPEENGRLFAEPDGGETAGRRAPLAVVDLLAEVEQGPLAGLRL
AALHGRLAPDEKDKVMRAFAAGEIDVLVATTVVEVGVNVPNATVMMIMDA
DRFGVSQLHQLRGRVGRGSLPGLCLLVTEAEEGSPARRRLDAVASTTDGF
ALSRLDLEQRREGDILGVAQSGRSGTLRLLTITHEQDEELIGQARAEATA
LVDADPELSDHPVLAQALTELLGDDRAEYLEKA
>Tfu_2323 putative transcriptional regulator
MNQMAKRSDNDGVLPPKEGGATPSTVLKIRSLLPSLAPAEQRVAQRIIDD
PEGVANSSITQLARDCDTSEATVIRFCRTIDFAGYRELRLRLASEAGQAR
GARGSVQELTGDINPDDTLVTVVQKIAYADARAVEDTGSQLDIETLQRVI
ELLDGARRIDIYGVGASAFVASDFQQKLHRIGMISHAWTDAHAMLTSAAV
LRPGDVAVGISHSGSTSDTVGALAEARRKGASTIAITNFPRSPISEVSDH
ILTTAARETTFRSGATASRLAQLTVIDCVFVGLAQLRYADTREALEATYE
AVRGLRISREERRRS
>Tfu_0563 similar to transcriptional regulators
MTTIFGHGRLRLYLLKLLDESPRHGYEIISLLRDRFLGIYSPSPGTIYPR
LARLEEEGLVTHEEVNGRKVYRLTDKGRAELRERERDLEDLERQITESVR
DIAQAVQRDVRDTISHLREELKATAQHTRRSRSERQESAKTGADDVWSRA
ADEQEERRDREREHGFAWNREWEKFAHTFGWVWPKGPKDRAAGSGFERIL
HDFTHRVRDIIRETGGISEAAIADLRRILDETLDIIRRDAARWGPPPTDS
ASRATDNADKEQTPRSTE
>Tfu_0518 putative TetR-family transcriptional regulator
MTAPSEAQPRGTRLPRIARRRQLLAAAQQVFVERGYHAAAMDEIAERAGV
SKPVLYQHFPGKLELYLALLEQHSEALVEKQRAALQSTDDNWQRVVASFK
AYFDFVSGEGGAFRLVFESDLRNLPAVREITEQTTLRCAELIGEVIRQDT
SVSDEEAHLLSIGLVGMAETSARYWLSRGTIPKDAAEQLIARLAWRGISG
WDLTRH
>Tfu_2855 similar to Putative stress-responsive transcriptional regulator
MSEYTTKKTLRRSKSNRILTGVCGGIGEFLNVDANLIRLAFAVFTLLGGS
GVLLYLIAWLVIPEEDAGASVLEHIIRTFQGKESKL
>Tfu_0216 helix-turn-helix motif
MASPTVRRRQLSAILREMRKASGLSLDAVAARLEWSRAKVGHIETGQRKK
PSVLEVKALMAEYGVTPEDPRYETVLMLTRQAQARGWWRRYDDLFPGSYI
ELEAEASEIRTYEAFVVPGLLQTPGYTRLLQQARLDRDPDDVERAVESRR
KRQEIFDRTSPPAVYAIIEEHALERLRGTPDVLAEQVAHLLHMAGRNSVT
LQVLRTRVGVHAGAMGPFVILDFPEPASPVVYLETYTDGLFLERREEIDQ
YRSLWDRIRDAALPPDRTVEFLRSLLTL
>Tfu_0351 helix-turn-helix, Fis-type
MRAVARARGRVPSGAEPRLTLAQALLLESALAVTHPTVGEIAHAAGISSP
SATRMLQQLERKGMVRRRRSEEDERATVVSVTDEGMRALHAHQTLVRDRL
HDLFHQVDPRLRPVLVDLLHTMRDLADRL
>Tfu_0789 hypothetical protein
MGTVSGAGERVRGPAVSTQRFVRPARAEDVEAIVDVQVAAWQEMYHALLP
EPVLAEMAGAEARAAFTAQWRSAVSSPPTSRHRLLVAVDEGAVAGFAAFG
PAQDPDRWPGTDAEIFAFHIAPGLTRRGHGSRLLHAVVDHLVDDGFHAVY
VWTLEQANPVRSFLEQAGWAPDGARRELDPGTVVPMVRLHAAIR
>Tfu_1913 putative transcriptional regulator
MPKDTTFPARCETGAASVPMSRRMRIRAATLAEIKTIARNLLSAHGPGGV
SLRAIAREMGMTAPALYRYFSSLDDLLLALRAEFFAELSAQITDASGRLP
ADDVDGRLLAALRAFRSWALANRAEFILLFGPRDEPFTTTEPHCAALQHE
KQRFAAIFLSLFNRLLEEGRVPLPDTASFSPELRAQLHLFARDAGFAGAN
ATEGALRVLTACWVRLYGLVCMEVFRSMPFTVGDLEPLFEAELCDVLTSI
GVRYRAPHS
>Tfu_0909 regulatory protein, LacI
MRRPTIVDIAKAAGVSKGAVSYALNGRPGVSDATRRRILDIAEQLGWAPS
SAARSLSDGRAWAIGMVVDRPAKTLAAEPFFMQLIGGIQLELDGSPFSLL
MRSAEDRDVETATYQRWHAERRVDGVLLVDLRRDDPRLPFVKELGLPAVV
VGGPEHTQGLPCAWTDDAEAMGEVIRYLADLGHRRIVRVAGPAEFVHTEV
RSQAFAKVAREVGLTRAEIVHADYVESRAADITRELLSAENPPSALVFDN
DLMAVAALGAAQEMGVPVPERLSIVAWDDSRICQVIRPALTAVGREVTQH
GRIAASLLMEVIEGRTPRSRQTPPSRLIPRASTGPAAF
>Tfu_2816 hypothetical protein
MGTERATRILDAAAELIARYGYAKTSVSDIAQRAGIAKGAIYQEFPSKEA
VVAALVERQVHQLTATVARAVRDDPDGARLSVIYRHALRALAADPLMRAF
YTADSQILGDIVRRRGPERYGPRQRLVVDFVSRMQDAGLIRADLDAAAVA
HVLGIISLGLITIESTVGSAVSPPLEKTLDALSTLLAEGFEAGPDADRAA
GQRAFDTFLADLAATARPGTPQ
>Tfu_0549 anti-sigma factor
MSGEEPYATPCSEVLDKVYAYLDGELEEANCAEIRRHLDECAPCLREYGL
EEAVKKIVAKCCGCDPAPAQLRARLMEQLAQARAAMRGREAVAE
>Tfu_1141 Tyrosine protein kinase:Serine/threonine protein kinase
MAVSGELGTVPYALVDDVESTDEPEEEPEQIGGHRIVERIGTGGAAAVYA
ALDSAGHWVAVKVLHPMVAANTTCRNRFAREVALLREVADTYTAPLLDAD
IHTERPWLAMRYIAGPTVGRRVDAEGPLMGVELLEFAAGLAEAVAALHRA
GIVHRDLKPGNVLLAGDGPKIIDFGIARRTSETGDADSGKILGSPGWISP
EQFHHRVPGPAADVFAWGGLVAYAATGRRPFGSGTLRQTVERVLHGEADL
RGTPSLLLPWVQAALDTDPDRRPAAAELAAAIGALRDGHQPVHDARSWAS
ISSR
>Tfu_2254 putative LysR-family transcriptional regulator
MLDLRRLHILHEFAVHGTIAATANALGYTPSAISQQLAALEREVGTQLLD
RTARSAELTDAGRLLLGHAEQILAMVEAAESVLAAQTGAPQGRVTLTAFP
TAAVAFAPSLARELRTYEGLQLVLRQTTHGSGARQVQTAEVDISLVDHWS
ERAPDDAAGTLRYFLLLHDPLVLAVPEGHRLADPSIPVDFAELLDESWVT
APVGEPSRSAIDRLLGDVGGSPGAVWEFEGIGTIMSLVARGLGIAAVPAL
AFSSSYPGLVHRRIPNAPVRRIYALARATSVPRPAIDVTLRALRKAAQDI
INVLNTERGEALVY
>Tfu_0412 putative TetR-family transcriptional regulator
MSEQSPKTRKKQRMTGKERREQLLAIGRELFAERGFAATSVEEIAARAGV
SKPVVYEHFGGKEGVYAVVVDREMQRLLGLVSDALVEGSPRQKLERAALA
LLQYIEEHSEGFRILARDSHAASGTGSFASLISDIATQVEHVLAEEFRAR
GYDPKLAPLYAQALVGMVALTGQWWLEVRRPRREVVAAHLVNLAWNGLSR
LDTKPRVEGARSRRRE
>Tfu_1006 conserved hypothetical protein
MSVFQRLSMIFKSKANKALDAAEDPRETLDYSYQKQLELLQKVRRGVADV
ATSRKRIELQIQQLEQKAAKLTNQGRAALAQGREDLAREALERKSALQPQ
LDSLHEQHAQLQSEEQKLTLAAQRLQAKVEAFRTRKETIKATYTAAQAQT
QISEALTGISEEMGDVGLAIQRAEDKTAELQARAGAVDELLASGALDDLS
GAPRDDIQAELDRMASTDAVERELEAMKRELGQGGNAPKQIEGGGA
>Tfu_1854 regulatory protein, DeoR
MDSAERMDLIVARLRAEGEVSVAELAELTGHSEMTIRRDLDHLADKGVLR
RVHGGAVSLLPRGQEPPYAIRERMAVDAKKRIGQAVGELISDGQAVLLDR
GTTVVEVARALAERHVTVMPLSLQAAAVLSESTTVRLLMPGGEVRSGELA
MTGPLTEASLAAVRFDTAVLSCCGLSLADGVTAYDLADVAIKRAAMRSAR
QVVLAADSTKIGQVTMGHVGPVSDFDVLVTDTGASDDSVTEIRAAGVAVH
RV
>Tfu_0801 probable acetyltransferase
MDHTIRPMTAADRPRLVEVSRAADTLFARAGVHLPDDDPDDLFDQAAAVL
VAGRPPVGFAALTVLDGAAHLEQLSVHPDYGRRGIGTALLTAACAYAQEH
GSPWITLTTFRDLPWNAPWYARHGFTVLPEPEWGPQLARQWREEIAAGIA
VLPRVVMRRRLTPDRTTATGR
>Tfu_0867 sigma-70 factor
MTKFNPSTPGKRRHTIRVVFPVSPKRASSMRDTAAEIVERRTPAGPAAAV
ERSGGPPVEAVGGEPEYVDRDDFAEHPETRTSSGDIVHAYLREIGRVPLL
TAEEEVELAKAIEIGLYAEQKLRAARTGPVPAQYSPEWFEDLNELVREGK
LAKRRLIESNLRLVVSVAKRYLGRGLALLDLIQEGNLGLIRAVEKFDYTR
GYKFSTYATWWIRQAITRAIADQARTIRVPVHMVESINRLARTRRRLHQE
LGREPTLHELSRELNVDHDRVVEIHRVSQEPISLHTPIGEEDSAFGDFIE
DTDAVPPVEAAAFVMLQDQLAQVLGGLSEREQRVITLRFGLEDGKPHTLE
EVGRKFGVTRERIRQIESKTLAKLRQPSRARILRDYLG
>Tfu_1556 regulatory protein, ArsR
MSNQETGVEPTTAADCCPTLLTSAVDEQEAIQLARVFKALGDPVRLRLLS
MIASHPKGEACVCDLTAAFDLSQPTISHHLKLLRQAGLITAERRGTWVYY
RLVAEATHHLAQVLTRHTTPTEVKA
>Tfu_1403 regulatory protein, LuxR:Response regulator receiver
MVRVVVAEDQAAVRAGLVMILETDPGITVVAEAADGQEAVDTCLRLRPDV
ALMDVRMPRRDGISATQELAAAGIDVLVLTTFDLDEYVFGALRAGAAGFL
LKDVEAADLLKAVHTVARGEGMIAPAVTRRLINEFAATRPREQEKADPAI
LERLTPREREVLACIGEGLSNQQIARRLYITETTAKTHVSRILTKLDLRS
RVQAAIVAREVGLG
>Tfu_0343 response regulator receiver
MSPARTVLIADDDRAIRESLERALQLEGYQTRTAADGVETLAAVHSDPVD
LLILDVMMPGVDGLGVCRVLRAEGDRTPILMLTARVETSDRVAGLDAGAD
DYLPKPFELDELLARIRALLRRAAPTTGEGAAEPLIQVGDLRIDPGARRV
WRAGREVELSKTEFDLLELLARNAGIVLDHSTIYDRIWGYDFGPESKNLA
VYISYLRRKLEPEGTTPLIQTVRGVGYTLRPK
>Tfu_0422 Protein of unknown function UPF0074
MRLTTFTDLSLRIVMRLAVAGEETLTTRSVAGMLAVPYTHAAKAVARLSE
MGLVEARRGRGGGLRLTPAGRAATVGSIVRELEGSKDVVACEDDPPCPLR
AACRLRGELRRAQEAFFAALDEVTVESLVASPTGPILVQLRAPERPQNSS
ELEKQ
>Tfu_0977 helix-turn-helix motif
MSRGSPVRKHYLVSQLKRLRAEARLSQEQVAEEMGWDVSKLYRIENGRFV
RLNPESVAALCRLYGADDGLFEELVAIAKAARRHKPWWSQFEEGAGNDFY
SVEYEATLIEEYAVGLVPELVQHPDYWAALVRRRVPAGSAEYQKLCAALR
QRQAAVLERDDPPRFWSVVDESALRCAVGGPQVMRAQLTHLLELVKHPNL
VIQVLPLSQGMAHPATFTVLRLDGGAKVGYIGVPPHGCFVDGGDRVAAYA
QRFELLQATALPPQETPGYLRRVLAELEDADG
>Tfu_1785 regulatory protein GntR, HTH
MSSSYPGRGVHGRVVELLGERVASGMIREGDTLDLRSLSAELGVSMSVVR
ESVRVLAAKGLVDSRQKRGTFVRPRTEWNLLDADVVRWRARGGDTARLMA
DLAELRALIEPAAARFAAQRRTENQLADLDQALDCMDRTRGDPRAHALAD
LEFHRCLLAASGNELLSRMDLLVAPGLVERDILVHSADPKADPVPAHRAV
VDAVRARNPDAAEQAMRALLAAADADLRRLAGTALDPPNRKDRP
>Tfu_0392 helix-turn-helix motif
MVARMPVRRRYLVIQLKRLRREAGLSQDEVWKALGWSRAKLQRLEAGDFQ
RLKAGDIMALCQVYKADKAVAEELIQIARDSRAEKPWWIRYKDVLPGAFL
GLEAEATLIQEYNIALVPGLLQTRDYATALMRTSVDIHGEEEVQRRLEIR
AERQRTVLDREEPPMVMAVIDEAAIRRQIGGVETMKAQVRHLLELSERPR
IDIQILPFSAGAHAAAGVPFTILGFDGTDAAGSVVYLESHKDGYYLDTDE
EIARYRLIFSRTQGSAMSVEDSRIFLERLLT
>Tfu_3105 conserved hypothetical protein
MSTFMIEPGARLANRYRLDELVSETSGASLWKATDETLARPVGAWTFADG
FSRTSEVVRAARAASRVSDARVTQVFDADESGPTPYVVQEWISGTTLSDL
LRNGPLEPERAAGLIAEAAEALAAAAQVGIHHLRLTPDKLVWSVGGAVKV
IGLGLDAALHNITVDDPQGTDAQGLGRLLYAALTGYWPGPEATALRPAPI
VSGRPCEPAQVVAGIPDVLNTIVCRAAFPESGYPPLRTPQELVDALADVP
RVVPIPMAQVASPPPPPRGTSRISGQLDVAAAASSTPRTSRSSRHRTPQA
TEGSLTNRILIGAVALLVFVAVVMGAWMLGSSMRDTSGTQTADVPGDKSE
ETELVVLTPVGATGFDPPPAGDNSEHDDKAPNTIDGDPSTHWNTEGYNSA
AFGNYKDGVGLLIDMGTEVEIHEVDITFGSGTYSAELYVRNDSGGAPGED
EKPVWQGAGVTGKVPIKLDEPATGQYVVVWFVSPLSQDGGKYRGTINEVE
LRGIQ
>Tfu_1238 response regulator receiver
MVRAVSKDLQEAGFDVRAAATGAGALARHREADVVLLEVSLPDLDGFQVC
QRIRSRSSVPIIFHSVKATERDRVLGLKLGADDYVVKPCGTWELAARVEA
VLRRARVAEVRIPRQDRGGVAVVGPLRVDLNQRQVEVGGRKVPLTYKEFE
LLRVLIERPGHVVSRAEIMHKVWGYTPESDTRTLGVHMVSLRRKLALPSL
IETVRGVGYRITSEFAAG
>Tfu_1658 Tyrosine protein kinase:Serine/threonine protein kinase:Sel1-like repeat
MSSATGRWRESPPTAVKNEEDNGRCPRELRVQSEAVLAGRYRLEERLGRG
GMGEVWRAFDPHLEREVAVKLILSGDNDGVLIRRFQREARISANIQHPNI
TAVHDFGHHEGQLFLVMELLRGRDLGAVLADHPQGMPLDLVVSVAVQAAD
ALRAAHTHRVVHRDLKPGNLFLLDTGHVKVCDFGIAHIADATSQLTAVGT
ALGTPAFMPPEQWKGEEVDSRSDVYALGGVMHTMLTGRIPFTGPLPALLA
QHLTQDPPPIREFRPDVPLELADLVARMMAKDPAARPDSHELGELIYRAA
APEASGSPAFFSPQIAPQALPTAPPTAAPVPPQPSHATGYAAPSQWMPAA
PQPHPTAHPPAEGDPQTMFTLGLRHREQGDIAGAESWYRKAAEAGHLDSM
FNLALLSRERGNLVEAESWYRRAAEVGDVDAMVNLGDLLKERGESAEAEL
WHRRAAEAGHIASMHTLGNLLYSKGDTAEAETWWRRAAEAGNIRAMGVLG
NLLEQRGDTFGAEQWYRRAAEAGNLDAMVNLGVLLENRHDTFGAEQWYRR
AADAGDIDAMVNLGNLLHGRGDMGSAQYWWQRAAQTGNTRALNHLNQMG
>Tfu_1244 helix-turn-helix motif
MDRFSPKGDPESDNVSSRLSLAEEEPVPRPPKPLRPERSPADWFGAELRY
WREHRKLTQRELAQRVWVSTSLVGRIEVAERSCPPDLARRFDEVLETGGV
LSRALRLINATEGDSDTKSEKGGKTADPPARNPLSGSSRDLCPAAGTIRD
IAETTVNDLMKRRDALAAGGALVVGTALTETLERWLVPLRKPVTRQSGAP
EETELERIEAGVAALRHWDDRWRLGISRKAVVAQLSEVADMAGEIRSAAI
QPRLFLAMAELSRIAAAMSYDEGDHPSAQKYYTLSLRAAHQAGPDYELYG
VGVLADMARQMLDLHRPQDALEISRLALDGARTRKAPPAMMSMLYTREGW
AYARMGRVQAYRRTVAQAEEMLENDTAEPLPEWVRTIDRAELSGVVGARY
RDLAQNQDDPAAKRKNAEEALHYITQALELRPPTRRRNQAFDLIGLGRTY
LLLNEPVEAANAVCNAVAVAGGLRSGRVRRRLQDWYREAEPFRREPVVAE
LREELSRTLLAKSQT
>Tfu_2121 hypothetical protein
MPLSGQTYKAACVKELVRRAADNDEAAWNALLDRYSGLVWKITRSYPLLF
HDAQDITQTVLCNLAEYLTRLRTPERIGAWLATVTHNECRRHLRIHGKVQ
IFPAEDLDSPDHRTPESLSLVAEDVARVRSALNQLDSPEREVAHVDVYRP
GLPRPRQPDWQG
>Tfu_2200 Protein phosphatase 2C-like
MSTSPPSRLLRSANSVAQRVFAFLRRKVLFRYRLVLIVLVLLAVGIGVGA
VWGPPGWFPPSAVIITVLAGGLLLKRRSLAFLFGVVAVVLAFTAYALDFS
QVGPGLAVTIGVTAVVAYLLSGVRERLGVQGLDGEKMLLELRDRIRTQGQ
LPALPAGWHATQVLRQAGGSSFGGDFVVSTLRDDQLDIAVVDVSGKGVEA
GTRALLLSGAFGGLIGAVPRGEFLEHCNDYLVRIAGGEGFVTAVHLSVDL
TTGEYLLASAGHPPAVQFDHTTGAWSPTEAKGVVLGIIPEMSYTPVRGRL
RPGDAVMLYTDGLVETPGEDLDAGVDRLLGAAESLVAMGFGPGTEQFVDT
LSKDKNDDRALVVLWRTH
>Tfu_1710 regulatory protein, LacI
MGSGYVTLEQVAKHAGVSLATASRVINGSTRQVGEKLRERVTASARELGY
LANASAQTLARNTSSLVGLIVHDIADPYFSSIAAGVTRHAEGEGLVVVLG
TTGRAPQREVQLLSTLRAHRARAVVLVGSRTIDEESTRKLADEIRIFTRQ
GGRVACVSQEGLPADTVVPDNRNGAAALARHLIELGHRKFAILAGPTDLC
AARDRLDGFHSALSSAGIELAYHNVVHGAFTRDGGYESTKRLMATGTDAT
CLFAVNDVMATGAMAALRDLGLRVPEDLSVAGFDDIPTLRDLTPALTTVR
LPLEKMGEEAARLALDGETPDEPRVIPVQGEVIARESTAPPTRS
>Tfu_0504 RNA polymerase sigma-70 factor, ECF subfamily
MADPAPAADFGHWEPPSWEEVVRTHSARVYRLAYRLTGNQHDAEDLTQEV
FIRVFRSLANYTPGTFEGWLHRITTNLFLDMARRRSRIRFEGLAETANDR
LEGREPSPAQAYDDRHFDADVQAALDALSPEFRAAVVLCDIEGLSYEEIA
ATLGVKLGTVRSRIHRGRAQLRAALQHRRQAAERVGEVTEA
>Tfu_1262 hypothetical protein
MTRRYEGKIVKEAESHALTEEFLIRPPRQERSRRAWARVLEAGASLFEEG
GYEAFTIAAVCERAKVAPRAIYDRTPSKDALLVAVYEYWVNRVWEEMRIF
DDEEQWIGLDGPELVTRLFTELGSILRRHESFTRSLMALSPTTHDRIYRR
VQWYNRQLIDRLTNLLLLAKPQITHSDPETAVQMCLIAVYSALIVHVGCG
AVLAPASLDRDDFNRHLAEMALRYLLGAEPQAA
>Tfu_2139 carbamoyl-phosphate synthase L chain, ATP-binding
MCRNAREGTAAQYYGGPPASGGIGTEPGAGHRPPDSPDRRVQQSRHTSVR
EVFVSPASSTRSKQQPEALQEPVIQQLIERGRSQGYLEPEDVRRAFEEAE
IPMSQAQAVLRTLTKEGVTLIVNAAESAPPRRKSTRRKTTSASRAAAQTS
TTRAKRTAAAQEKPEAATAVKKSTEDAEETTTASKKRTTKAASTKSKTTA
KRSTAKKTTTKSTTKKTAKTATKKKTAATAATPAVEEELGLEATDLLEDN
FEETGADLELVDDTDDEVVELEETTPAKRSRDLPEKADADDDDSFVLYDD
DDDAPAAQVVAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFA
EEKLSKKGHELTPEEREELEWIAEDGKRAKKHLLEANLRLVVSLAKRYTG
RGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQ
ARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVVE
VQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIQPGEAVSFTLLQEQLHS
VLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMS
KLRHPSRSQVLRDYLD
>Tfu_2389 conserved hypothetical protein
MEAHMDRLSLTGALLVATPLLEDPNFYRSVVFVIDDTPDEGTLGVILNRP
SELGVGEVLAEWGEHVSQPAVMFAGGPVGQDAGLALAVPDDGQRPLGWKS
LDAMDAKTWPNGLGTVDLDTPPQLVADALRQMRVFAGYAGWSAGQLRAEI
DQGAWYVLPATVDDVFCADPRGLWSRVLRRQGGELAFVATFPHDPTLN
>Tfu_2080 hypothetical protein
MTEYATGTPQGDGRYRYFFRDDSSGDTQRVEVLIEAVDPQTAEQLAAEAA
LAEQATEAVMNETGGRFPHSLAEYVGTRTGTNGTQSTLVLRMPKGRGQPF
FLEPKIQQTPGILPVSPKVVRKIAIDIYEALTVLHSVGYVHGAVNTESLV
WNRREAVLARYRRMASDPDGLQGAIDVADAARLLYHVAIGRPLNGDTLPP
GDQRELNSRLFGLGDLIAAALDQQERRISASEAWARASRLVPVENSTAAA
TPAERREDSPEEAEARHRFRAIRTRHEDIRRRRYPPAPPSAEPRWTPPVS
EELPSRSLGRVLLDEGIGAFARRLLGRIGKPAAAASRLVSGKAAVLLLVI
VLVVLLGRIL
>Tfu_1330 response regulator receiver
MARILIVEDEDRIASFVRKGLNANGFTSTVVDRAGAAIDYALTGNFDLMV
LDLGLPDADGFTVLRRLREEGSRLPIIILTARDSVRDTVTGLETGADDYM
TKPFRFEELLARIRLRMRSAHNAETTVLHAGDLALDLRTRRASTPEATVD
LTAREFALLELFLRHPGQVLSRQQILSHVWGYDYDPGSNVVDVFIRALRK
KIGAHRIETLRGMGYRLGG
>Tfu_1845 regulatory protein, LuxR:Response regulator receiver
MISVLVVDDEQLVRSGLRMILESAPDLEVVGEAADGAEAVALARKLQPDV
VLLDIRMPGMDGLTAAAHLAELPNAPKVVLLTTFDLDEYVHRGLRAKAVG
FLLKDTPPRDLITAVRTVYEGNAMLAPSVTKRMLERFAAPSGNSAAEAAR
RLEVLSERERAVLVGVARGLSNAEIAAELGMREATVKAHVSRILTKLEKN
NRVQIAILAHDAGLV
>Tfu_1342 Tyrosine protein kinase:Serine/threonine protein kinase
MTGQVLDGRYRLVERLGSGGMGEVWRGHDERLGRTVAIKLIHPGASVDDE
AVALFRREAQVTARLAGHPNIVILYDYGTDGDTVYTVMELVTGCSLSALL
RERGRLPVELAVRWGAHVCAGLAAAHAVGVVHRDIKPSNLMVVDADAPDG
GTVKLVDFGIAGFHEAALHQRTLPPTGEPFGTPLYVSPEQIQMLPVGAFS
DLYSFGAVLFHMLTGQPPFHAAEPMPVLRMHLTEPPPNPAELRPDVPAEL
AELVLMLLAKDPGQRPDNALWVRDRLLSLSGTSPPASAASPTESASREAQ
MRRLEQSWVEAERLAAAGQAAAAAQRIGALLGELAAIYGADHPATLEARR
RHASLTSRAGDPERAAALFDTLVADLDRIYGHAHPETYAARHHLAAATEQ
AGRRAEAAVLRSELVDALTAQYGPQAARLLHPRLFYAVDLAEAGDFTGAE
KLLRDLAAALEQQLGAHTPALQIVHHYLDAAAAFASETAGAEPPHPNRFR
ESTRLDGRPPPHPLRQRLTRWLRSTTEL
>Tfu_0257 response regulator receiver
MTESETTARPHVLVIDDEPNIRDLVQAALRFHGFEVSTAGSGEEGLALAR
SERPDLILLDVLLPDISGFDVCRRLRDEDDDVPVIYLTARDTPSDTVTGL
SLGGDDYVTKPFSVEALIARVRALLRRVKRDPNSAQSSDGVLRVADLELD
EKTWTVRRGGVPIDLSPTEFRLLAYMMHNAGRVLTRAQLLENVWGWDYAG
QSQIVETYVSYLRRKLDPFGPNLIHTQRGVGYALRVKEDDK
>Tfu_1147 putative transcriptional regulator
MVAMAIPAGWRTVGPGSFFRRAAGCRARRHAGHHHGWHFAHHGGFPPPIP
PGPWPPHGGPAFGGPRGPFGFHGPRGGRGMRARRGDVRTGILLLLAERPM
SGYEIIKEGRERSNGVWRLSPGSVYPVLQQLESEGLVTLAATGVGRRRPY
ELTEQGHAYVAEHAAELTPPWESAAQEYEETHARHLELASLASQLTAAVA
QVSQVGTDAQVERVKQLLVKARKSVYRILAEDDLSDDEEL
>Tfu_0906 hypothetical protein
MTTTDLAAPDAPFVLHVLDTAVQLFSRHGTTGVSLDAVAAAAGVDPDDLR
RVFPTRLDLVYRLVVDRVRLLTAAEPANTAPASPVEQMRRLVRRHIEHSC
RYRVELTLRRSLLRTLRAISPPRYRELSLLLRAYHDRIARIIDQGRTDGV
YTPADGSGEPVTATTVLDTLDSTLNWYDPSSMTPQQLGDVYEDLVLHHLL
GVARR
>Tfu_0842 putative RNA polymerase ECF-subfamily sigma factor
MVVEAPAATVSARWDADQAVTQLYSDHYRPLVRLAALLVRDVATAEEVVQ
DAFVAMHGAWRRLRDPNKALSYLRQAVVNKARSVLRHRAVVEKHAPKALP
DAPSAEHGALNELERAEVVNALRALPTRQREAIVLRYYGDLSEAQIADAM
GISRGAVKSHTARGISTLRKLLEQTK
>Tfu_2454 putative lysR-family transcriptional regulator
MQLQQLAYFLAVAETRHFTRAAELSRVAQPSLSKQIKALEEELGAPLFVR
ARGNITLTPAGEILLPLAQRILADVETARREIQELAGMRRGWVRLGATPS
LCAGLLADALVRFHERYPGIELHVEEGGSRDLIRALGGGELDLALIILPL
HSSDPAFVTVPILRESLVVASPISQPPPTNGGAMRITDLRDQPLVMFRRG
YDVRETTLSACRAAGFEPRLAVEGGEMDAVLRFVEAGLGLAVVPSMVLRN
RPGLRGTPLAEPRLLRTIALAHRKDVALSRTARAFWRVLMSYLGTLTKAE
LGEDLEVIAPTEKLKRI
>Tfu_3028 regulatory protein, MarR
MGDSTPLRPRELRAWTSYQRMSAALYAHLQQTLHRDTGLSWADYEVLRAL
HSSPEGRLPALDLRCALGWEKSRLSHQVRRMAERGLLCREPNPADARSAV
VCLLDKGRRAIEKATPEYLARLRADFLDLLTPAQLDALTEISETVLAHLV
CRDQEPPREAASGTGQPSRDSR
>Tfu_2910 response regulator receiver
MTRVLVVEDEESYSDALSYLLRKEGFEVAVAPTGTSALEIFDRTGADLVL
LDLMLPGLSGTEVCRTLRQKSNVPVIMLTAKDSEIDKVVGLELGADDYVT
KPFSSRELVARIRAVLRRRTADDTVLPSVLEAGPVRMDVERHVVTVRGEN
VQLPLKEFELLEVLLRNAGRVLTRPQLIDRVWGADYVGDTKTLDVHIKRL
RAKIETDPSKPQHIITVRGLGYKFEPEPAT
>Tfu_0408 redox-sensitive transcriptional activator SoxR
MAQLPVQLTIGQLAERSGMSHSALRFYEAKGLIRAERTAGNQRRYHRSTL
RRLAFIAAAQRVGLTLARIQEALATLPEERAPTAEDWARLSRMWRDELET
RIDALQRLRDRLTSCIGCGCLSLRSCALRNNDDALAAWGPGAPLLRPARE
GGL
>Tfu_0849 regulatory proteins, IclR
MTTSQTATGDAGLDGMNGTTVTAGKRERSGGVQSLDRAFCLLEIMAEAGG
ETSLSELAQSSGLPLPTIHRIVRSLVSNGYVRQLPSRRYALGPRLIGLGE
SASRLLGAWARPHLARLVDELGETANLAMLDGDQVVYVAQVPSAHAMRMF
TEVGRRVLPHSAGVGKALLAQLPDDEALAIVRRTGMPAATDRTITTPDEF
AAELARIRSRGYAIDDGEQEVGVRCLAVPVVGGPAMMAISISGPESRMTW
DFVAKAAPVVREVARELADDLNNQAR
>Tfu_1360 helix-turn-helix motif
MSEGYQEASFGKRVQAIRERNGMTRATLGGLVGRSAEWVKSIEKGRLQMP
RLDMLTQLAAALGCDLAELVGGKHPIIVAPYVKEAHPALLEIREALTSYP
IGRDEEPATAAELAERVRHAWMVWHGSRANHRTRIAALLPPLLADLRYAA
RVHEGKERRSVLASLAEAYHLAQLFLSFQPAPDLVLLTGDRGMEAALEAD
NPRAIASAAWYMNHVFRDAGERHEARVELAMQAARLLDPEKDSDELARWG
LLHLAVALSYAKVGRAGDAWRYWDIAYEAAQKLGRSYAHPYLIFGMGIVE
GYAVTMHDDLMQGGKAVEAAAKVDLGLIPSATRRAFHIIETARGHWQRGE
QAAVVHLLNKAHRESPETIRFNIFSRRAVSDMVSNPPSMLREDVDSLAQK
LGVVAR
>Tfu_1094 NusB antitermination factor
MGGSRRRGSRHKARVRAVEILYEAEVRGVPVSEVIERRRAQTEPPINEFT
EQLATRVDEHRARIDELLETYAIGWTLDRMPVVDRNILRIGVYELLWADD
IPDGVAIAEAVAMAKELSTDESPVFVNGLLSRLMEKKPSLSL
>Tfu_0447 prokaryotic transcription elongation factor GreA
MTETRDDNVTWLTQEAYDRLTAELEYLSGPGRIEIADRIEAAREEGDLRE
NGGYHAAKEEQGKIEARIAHLQSILSNARVGQAPQREGVVGPGMTVTIKF
EGDEEEMTFLLASREESGAPIDVYSPKSPLGEAINGKKVGEKVTYKLPSG
KEATVEILDAVPYNGGS
>Tfu_1656 helix-turn-helix motif
MVKHPAWSRFGAEVRRLRVQSGYSQAQLARAIPLSQSMLSGIELGRKGAK
RDHAEALDRVLNTGGRLVRLWDSLNSIPAHPSWFQNVLALERKAVEIREY
QMVVLPGLLQTEDYARSLIRPAQPWANAEKVDELVHARMSRREILTAPDR
PLCWFVVDQVVIDRVTGSPTVMKEQLTYLLNLIEDHTIRFQVFPQEIPLH
PGLTGPIRIMSFDDRPTMAYVEHTLGGLLTDQQQEVRYCSAIFSALQSEA
LSSHASADYIRRRKDQL
>Tfu_1670 putative acetyltransferase
MGVIVEATSWDDPVGVRLRQEQEAEIIQRYGGDLEQCPKPSAEDVDVFLI
ARDAETSVSVGCGGLRRLDEVTYEIKRMYVTPAWRGRRIGEVLLRALEEA
AISRGAQRMRLEAGTRQPEALRLYERCGYQRIEPFGHYANCAESICFERI
LVPSAA
>Tfu_0330 regulatory protein, LuxR:Response regulator receiver
MRVIIAEDSVLLRGGMARLLEDAGIEIVAQVGDADALLAAVARHDDVDLC
LVDVRMPPTYSEEGMHAAIRIRKEHPDVAVLLLSQHVVGTYASQLLGGSA
SKVGYLLKDRVADIDEFLQTLRRIADGGTAIDPEVVAQLLSRNTDNVLDR
LSPRETEVLAAMAEGLNNAGIAARLFITERAVEKHIRSIFTKLNLLPDTH
EHRRVLAVLQYLRASSRQP
>Tfu_1052 helix-turn-helix motif
MPPSEYAKALGARLRAIRTQQGLSLHGVEEKSQGRWKAVVVGSYERGDRA
VTVQKLADLAEFYGVPMSELLPGEPAPAPLGPTPKLVIDLERMQQLPKEK
AGPLARYVATIQSQRGDYNGRVLSIRQEDLRSLAVIYDRSPAELTEEFIN
WGVLDPEARRAVEAF
>Tfu_0651 ribonuclease III, bacterial
MGTQLSPAEVREFQETVGVEIAPDILTRALTHRSYAYENGGLPTNERLEF
LGDSVLGLVVTDTLYRTHPDLSEGQLAKLRAAVVNMRALADVARELGIGR
YVRLGRGEEATGGRDKSSILADTLEALIGAVYLDRGLDEASELVHRLFDP
LIARASGLGAGLDWKTSLQELTAAELLGVPEYVVEESGPDHQKTFRATVR
VAGQTYGSGEGRSKKEAEQQAAESAWKAIRAATEKAKQES
>Tfu_1596 CRISPR-associated protein, CT1974
MHAAVMSSFPTLLPSDTDGPRVLWRIDRTSRAEVFLYIVSPPKPDLTHLV
EQAGWPTQPTWESYDYTPFLSRLAKGDVWAFRLTANPVHSIRRKAGEPTK
LTAHLTQRYQKKWLLQRQDAAGFRVVEKPAEKRRLPEGDEHELIVHNRRD
WNFSKGARKGRPVSLVTVTFDGRLEVTDPDALRRALISGIGRAKAYGCGL
MTLAPVG
>Tfu_0838 negative regulator of class I heat shock protein
MLDDRNVLDDRKLAVLRAIVEDYVSTNEPVGSKALAERHKLGVSPATIRN
DMVALEELGYIAQPHTSAGRVPTDKGYRLFVDRLSKVKPLSKAERRAIET
FLSGALDLDEIVSRTVRLLAHLTRQVAIMQYPSLTRSSVQHLELVPLGPQ
RLMLVLITNTGRVEQRVIDGLAEVSDDVVENLRGALNRALVGKWLTEAPK
EFPTVLAQLPLEERPIAESVMSVLTESLVEKHEGKVVFGGTANLAAMGFS
AGLRDVLEALEENVVLIRLLGEMGDASMLTVRIGAENNHEGLQSTSIVAA
GYGIGDQTLAKLGVVGPTRMDYPGTMGAVRAVARYVGQILAGQ
>Tfu_0143 similar to Transcriptional regulator
MTTNSRSSTTRLPAPSSCPTTFTGEEVFPALRNGSAVISPPSLINAPLRR
IPSQQRSMARVQRMLDACAELLDEAGYAELTTTKIAERAGVAIGSVYQFF
PDKKAITQALGLRYLDIFSARIVRRITEQNFDHWTETVDAIIDEYVTMHR
EEPGFRFLRFGDAIDPKLLDSTRENNQVIATRLRDLLISLAGAVQSEKLD
LAVLVSVEAADAVLKMAFRDDADGDPRLITAAKQLVRSYLEHVFGDEPDT
AQELHESTDDRSPA
>Tfu_0500 Tyrosine protein kinase:Serine/threonine protein kinase
MPAASQDNDGGPSQSGGPMADPAPLIDTDPARIGEYTLLGRLGQGGQGVV
YLGSAPDGARVAVKTLHRDALDLPGLREQLAEEVEMARRVARFCTAQVLA
ADLDADPPYVVSEYVEGPSLQAVVRERGPLRGASLERLAVGTLTALAAIH
QAGIVHRDFKPANVLMAPGGPRVIDFGIARALEGTAILTSRIAGTPAYMA
PEQITGGPLGPAVDMFAWGATLVYAANGRGPFGHGSLKAVVQRVINDEPD
FGELSGTLREIAERCLNKDAAQRPTAAETLMLVLGIEGPPPTEEPSTDTA
IPVTHQTLVAGAIAAADTGEQESAAELYRSYPPAPPPPHSNVAAQPSPTP
PPHPQTASGPQPSLPSTGAQHSGYGYATGPHQSGYGYATGPQQGGYAPPP
GPHQHAYPTPHSGNAAIPPHGGPSGPYAPAQPWMPSTGGYPQTSQPYSGQ
QYQQQAEGTSTAFVLGVVSIAVIAGVLLFILLFLLIGSLG
>Tfu_0701 Tyrosine protein kinase:Serine/threonine protein kinase
MTDRWWGERSEHPWEQEALEHIKALMPQRDPYRAWQCFSFTAASGQIREC
DLFIVTPAGAFLVEIKSQPGRAINRGSTWTFYGDRVRTIDNPLYLTDKKA
KELKSQLEWAAKKLGIRDYRLPYFTPAVFLSAPDLRCDFDEIQRQHVYGR
EGLDKQTGLPGIWSGLLNRRTHRSPDPVFFRSITRLMETIGAKAIRRDLT
AGSYTLQRRAFDSGPTWTDYLGKHTVITNKHSRVRIYHYRPDADEQTKKS
VLRAAEREYRSLVGVAHEGIVKAEDFVEVEGYRPAVVFEHRESWQRLDHF
MQEKGADLDVYTRVEMVRQLAEAVNHAHRNRLFHRALAARSVWVELDGHY
PRLRIADWQTAARQGIGSLGHTQHVGQTTVHALVEHIEAAAQAYLAPEVN
APNSDPRALDMFGLGALTFLILTGQPPGNDRREFNEHIREHGELSPAAVS
DDIHPLMDTLVREATRLIPTERTSSPREFLRRLEEIEELLTRPEVVTSPL
EATKGQEIIDGWKVESVLGKGATSRALLVSRNGEQRVFKVAVNDSAAAKL
RREAEQLRRLRDRRIVAVIGDDPVMTIGEHTVLQLELAGEVTLADYLRQE
GNLGIEELRRFGIDLFEIADYLEDQKVFHRDIKPANLGVRERTKKSRELV
LFDFSLAGTSTRETQAGTPGYLDPFLAEGNRSYDSAAERYAIAVTLHEMA
SGDLPVWNEEGVEPHLLPDSVEYPRLSEEDFPDQVRASLTEFFRRALHRR
PEQRFATLADMREAWEQAFQNIEASPVTTPDSLELAEVDDEATRRRNAEN
ATADTPLVVAGLSPDALDAATRLLRCETVGDLLKKPVAEIRRLRGVPLRA
RNELARQANRWRRKLAHAEPLPKVSAKLSVDGASEEEKELALENASLDKI
IRQFLPKTTERNRDWVRTVRELLGLPEDALAEPVWRTQKEVARRLGLQQA
TVSRHLAEARQYWVKNTPSQLRTAVRDDIVEILERHGRVREVRQIADELL
SKRGTSAEIPETRKAYALAAIRVVTECEERKQKESPVFVLRRLYTHSDTP
KVLVAQVIENDPTVPVEADLLDYAAALGREADRIVRFDDDAPLPSPAEVR
QRLRGVPTKPGMAPLSDVDLVTLAAAASENAQATARLELYPRSLSLKRVL
DIVQVASYLGEPGITPQQIVDRVRARFPHMDPPGVHVIRRQLREDFPNLE
SRTASDGTEYWYLPRTAITRSITYSAISAGGGYEPPSEHESARRRLDQAV
ARGGYLAVKTWMSEAERVAELLAARPDVAAFDASAEFVRVVTEMINQYGG
PPWDVVVAADVPGGPPEFGNMVAEACMILGDRIRAAGQDRPVFVYGATPL
ARYPAGRDLLRTLAQQARESGTAPYGLWLLCPMGNPYRPARLDDEPAGAI
TDAEQLRLPRGFGAEEPVLVG
>Tfu_2491 regulatory protein, LuxR:Response regulator receiver
MSGAPPTRVESIKVLVVDDHEFFRRGLVSVLAEEPDIEVVGEAGDGEEAV
ARAKELRPDVVLLDVRMPKRSGIAACAGIKEAVPDAKIVMLTMSDEEEDL
FEAIKAGATGYLLKEISVVELPEAVRAVCKGQSFINPSMATKLINEFAAL
ARKGKDRRSQPTKPPRLTERETEVLRLVARGLNNRDIADRLYISDNTVKN
HVRNILEKLQLHSRTEAAVYAIREKFLDADDTDDGPIGQRGR
>Tfu_1467 hypothetical protein
MNLPAPKDRGGRPRDPDVDRRIIEAALQVFGLSGWSGFSMEAVARTAGVG
KASLYLRWSSKADLLTEAVASRFAPIAEIDNGDVRADLVEFADLLLDLFC
GPHGLAARRMAVESHIIPDITERWNRVRESQIRASRAIVKRAVARGELSP
HTPIGVLLDALHGAIVNHSIAAPEHIRSQTDARRRYARQLVDFLLSSLQE
YTAERGVEESARL
>Tfu_0920 regulatory proteins, AsnC/Lrp
MLDAVDWRILTELQADGRLSYNELSRRVALSPPAVAERVRRLEERGVITG
YHAHVDLDAVGLSVVALVQMGCYGPLCLLRDEAALARPEILRLYRVTGDA
CCVLLVGVPSMAHFEQLIDDLADHGRPSSTMVLSSPIPWRAVSRPQAER
>Tfu_2858 response regulator receiver
MLPSPRGLRVLAVDDVPLALTELCRLLRAAPEVGEVVAADDPISALRNIQ
ADRFDAVFLDISMPGLDGVELANLLSKLSDPPVIVFVTAHEEHAVTAYGI
GAVDYLLKPVRAERLAMALTKVVRMLSAGTAPVTPHRVRRPDAMAVLPVE
TAGRTRYVRRSDVRFVEANGDYVRLHTPEGVHLVRMPISRLEEYWADSGF
LRVHRGYLVALSAIRELRSDSSGGLLAHTDLGDVPVSRRHARELREQLLH
AAQTGMFDDPTRGA
>Tfu_0734 regulatory protein, MerR
MKSSSVELSIGELAARFGLAPHVLRHWESIGLLRPARRVNGRRRYTAEHV
GLVALILRGKDAGFSLEQMRDLLVAPDGETRRALLTDHLAALDAKIAQLQ
RARALVEHTLKCTADDFLTCPDLHALLDELVAESLAVPDPAQRSGPSCLA
RQEP
>Tfu_2496 response regulator receiver
MKGRVLVVDDDLALAEMLGIVLRGEGFEPSFVHDGDKALEAFRETKPDLV
LLDLMLPGADGIDVCRQIRAESGVPIVMLTAKSDTVDVVLGLESGADDYI
VKPFKPKELVARIRARLRRTEEPAPEILQIGDITIDVAGHSVRRGDQVIN
LTPLEFDLLVALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRA
KIEKDPEHPEIVVTVRGVGYKAGSP
>Tfu_2393 regulatory protein, MarR
MSRVGNPLNLPFDPIERAHDNWAARWGKSPAMAAVTSIMRAQQLLLGQLD
AVLKPYELTFARYEALVLLTFSSTGALPLGKIGERLMVHPTSVTNTIDRL
ERQGFVRRRPNPRDGRGTLAEITDAGREVVERATRDLLDMEFGLGCYSDE
ELWEIYTVFRKLRVNYGDFRAES
>Tfu_2150 Protein of unknown function DUF193
MRCPFCHNQDTRVIDSRAAEEGTAIRRRRSCPACERRFTTQETVLLMVTK
RSGATEPFSRSKIIAGVRRACQGRPVTEDALALLGQRVEEEIRSRGVAEV
SSHEIGLTILGPLRDLDEVAYLRFASVYRSFESLEDFEREIAELRAERTA
TQG
>Tfu_1851 regulatory protein, DeoR
MTVQDRPAFAARRRELIVELLRAHGTMALRDLAHELQVSEVTVRRDVRVL
EAQGVLDRRRGGASLPGYQGRRSQEQTTTPELVAIARTAATLVAEGDAIV
LGPGEATAALAAELVRRRGLTVVTNSLRNAQILADAPEVEVVVTGGILRG
ADLALVGGAAEQALEGLRVRRAFLTGHGVTAERGVSTSNAAIAGVDQALA
ACAEEVIVLVDHTRLGTDTMVQTVAPESIEHLVTDSNADPEVLLTFEDMG
TTVHVAVPDPDRGR
>Tfu_0325 conserved hypothetical protein
MATQKVSRSITVNAPAERIFAILTNPRRHAEIDGSAMVSGCLHGPETLTA
GSEFRMDMSMLGVPYRMTNRVVEYEKNRRIAWRHIGPHRWRWQLEPVDDH
TTRVTETFDYSPAGPFAILYQLAGYPARNARAIEQTLLRLKALAEAE
>Tfu_1374 regulatory protein GntR, HTH
MPLASTRRTGLVDQVITQLKAQIDSGEWSIGDRIPTEAELSDQLEVGRNT
VREAVRALAHTGLLEIRQGAGTFVRSSSELGGALRRRLKRSELRENFEVR
WALELEAARLAAVRHTEEDLDTIDRALGERTSAWHARDMQAFVEADFAFH
KAVVAATHNSLLIELYDDIAQAVYDSIAHMVYEETPETATEEPASDHQRL
AEAIRAGDTERALREAACYLDDLVNQAAASS
>Tfu_0777 similar to nucleic-acid-binding protein implicated in transcription termination
MSPRGRMGDNSAAPVRTCVGCKSKAAQSDLIRLALDGDAVVCDHARRLPG
RGAYLHPDRRCWEAAQRRQVWPRVFRVKRALDISPAAEWFAAV
>Tfu_2941 regulatory protein GntR, HTH
MASTVGARSAKPMYLQIADDIEEQIKSGRLAPGEEIPSEAALMERYGVSS
GTVRKAVAELRTAGLVVTYQGKGSFVKSRPPVTRKSSDRFRRSHRRAGKA
AYIAETEQAGVKPTVQVLSIGPVPAPREIADRLGVEEGAKVLARRRLYFS
DGTPAEEATSYLPWDVARDIPELFEENPGGGGIYARLEDHGHEFAEYTET
IRVRIATKQEASALRLSPGSPVIHLTRNAVTTTGRVVEVCDTIMAADQFV
LDYRIPATD
>Tfu_1404 conserved hypothetical protein
MSRNNAGLSRERIVAEALRIIDGMGLRSLTMRRLGDALNVEAMAIYHHFP
LGKEQLYSAIVEYISDPARALASPAAETAPEDEATPETDPEPEPRPWDQR
LRDWACDYRAALLRHSGALPLMIHRRPDTVAALRATELHYAAFTEAGLPP
EEVPGAAAALTSYVLGAVIHQVRSEGLPSSDPAVLDGRFPTVMALSSIDV
DHDRVFRTGLDALLAGLTAPRVQHGER
>Tfu_0033 regulatory protein GntR, HTH
MTEKPGYLRVADSLREPILNGELPPGTRLPSRAQLARRHAVSEQVARCAL
QLLVAEGLIEGRAGSGYYVRAPSAEVLLSRTSHLPGLDPLRTEWLGARTE
TASIAMARRLGTRVGEPLYRTECLGYAQGTPIALWVAWEPAILTLGTGLT
PGERPDTSVAERLAEVGVTVDRIEEEVSVRRLREVEARRLALEPGTAILL
VQRTHFAGRRVVETSDLIVSAEHCRLGYRLVSPSRPGRTAADKNGPSPPR
SRETAASSQMGSAE
>Tfu_2048 conserved hypothetical protein
MTDHHGTGRGPHWEEDAGPLVRPYAVTGGRTRPAESQLDMISTVVASRRE
TGITHLLPEHRAILRLCRSPVSVAEIAARVDLPITVVKVLLGDLVTQGFV
LARAPMPPRAATSEMTLLQAVLDGIRRL
>Tfu_2297 regulatory protein, MarR
MDSGASDTKRELIDRLRDLEIRQLKLFLRDRSLPLLSTTLTIQQLKVLVA
LAIDGNTPTHELAERVGVSVATLTGIVDRLAARSLVFRREDPADRRVRRV
DLTEEGRALVNDMWGASHKRMSEALQTLDVETLRSLVRGAEALYAALLRS
SPSTSAGWER
>Tfu_1025 putative transcriptional regulator
MITAIVMLKVDVGRIPEVAKTIADLEGVSEVYSVTGEIDLIAIVRVREHH
ELAEVIPNRINKVPGVLSSDTHIAFHTYSQHDLEAAFSLGL
>Tfu_2653 RNA polymerase I subunit A, N-terminal
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEK
IFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAP
VTHIWYFKGVPSRLGYLLDLAPKDLEKVIYFAAYMVTWVDTEARERDLPS
LEAQISVERQHLEQRRDSAIEERHRKLEADLAELEEQGAKADARRKVREA
AEREIRQIRDRAQREIDRLEEVWNRFKNLKVQDLEGDEQLYREMRDRFGK
YFRGGMGAQAIKERLANFDLEAEAEKLREIIRTGKGQKKARALKRLKVVS
AFLNTRNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINR
NNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLK
SLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKQMALE
LFKPFVMKRLVDLNHAQNIKSAKRMVERARPVVWDVLEEVISEHPVLLNR
APTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQMAVHLPLSAE
AQAEARILMLATNNILKPSDGKPVTMPTQDMVIGLYYLTTMKEGAKGEGR
AFSNIGEAIMAYDLGELDLQAKIKLRVEGDTVPPVNWEPPEDYQPGQPYI
LETTLGRYLFNETTPEDYPFVNQQMGKKQLSALVTELAEKYSKVQVATTL
DALKDAGYYWATRSGLTISISDVIPPPNKQQILDKYEQQAQKIQRQYERG
LISDDERRQELIHIWTKATDEVAKDMEENSPPDNPVWMMVNSGSRGNPLQ
VRQIAAIRGLVSNTKGETIPRPIKSSYREGLTVLEYFISTHGQRKGLADT
ALRTADSGYLTRRLVDVAQDVIVREVDCGTDRFLWQEIGERRPDGTIVRK
HNVENTGFGRTLAEDVVVDGKVIATKLSDTTEALIDKLLAAGVTRIRIRS
ALVCESKIGVCATCYGRSLATGKPVDVGEAVGIIAAQSIGEPGTQLTMRT
FHMGGTAGQDITHGLPRVQELFEARVPKGVAPISEVEGRVRIEETDKSRK
IIVVPDDGSDEVSYQVPMRAPLLVQDGQRVEVGQQLVQGTVNPHEILRIL
GPRAVQQHLVSEVQEVYKSQGVSIHDKHIEIIVRQMLKRVNVLESGDTKL
LPGEMIERPKFEEINRRVVAEGGQPASARPVLLGITKASLATESWLSAAS
FQETTRVLTENAIHGKSDPLLGLKENVIIGKLIPAGTGMPQYRNIRVEPT
EEAKASMYSVSSYEEPSEYTFGQGSGEAVPLEDYDFGSYNR
>Tfu_2790 regulatory protein, LacI
MAETPSRSVTISAIAAEAGVSAPTVSRVLNGRGDVAPETRERIENLLRLR
GYRRRGSRGDGQRRGERIGLIDLVFNDLDSPWAVEIIRGVEDAAHGMDSG
IAVSAIHRQASSTRKWLQNVRSRASDGAVLVTTDLDSELRSELEELHIPV
VVIDPVGLSDLTVPTIGCTNWAGGLSATTHLIELGHRRIGFVAGRPELWC
SRARLDGYRAGLETAGIEVDPELIAPGEFNYESGFRAGERLFDLDDPPTA
VFAASDQMALGVYEALRQRGLRVPDDVSVVGFDDLPQARWSSPPLTTVRQ
PLDDMGRLAVRTLRRLMDSEEIESPRVELATELIVRDSTAPSPTATKK
>Tfu_1248 helix-turn-helix motif
MQKDGGPWVKIGQKIREHRQHAGLSQEELAKLVALSPTMLSAMERGTRGI
KRDHVERIDAALGIPGTLTELWDRSRGAGLPPWYEQVADLERAASEIWVY
HPLMVPGLLQTEEYAAHILRVSHPRATPAEIEELVRGQMERKAIFDQERP
PRLIVVVDEGVLRRPTGGREVMRRQIGHLLQESSRPFVSIQVVPYDSEHH
PGLSNGFALFTVPWKNPVLYVETRRAGKPTDDPEAVEDYSQLFSDLRGAA
LPLGCSRRLMAQLHEKL
>Tfu_0887 RNA polymerase sigma-B factor
MTEPGGSRATTPIRGARTTPMTLRGTLPMSVSVSHSGHSSNGSHSRNSRP
PRHADEAYLRETRELLAELDRVRDDPKARERIYLKLTELHAPVARRIARQ
YRNRGEPEEDLRQVAMVGLYNAIRNFDPAYGKEFISYALPMMTGEVKRHF
RDRTWAIRVPRKYQEKRAELNRVTAEFTQRHGRSPTVRELAELLEMDEEQ
TLELIDAARAYSTLSLDVPFGPDDDGATLGDTLGGLDDALERVVDHAALR
PALAALSPRDRRILLLRFAGDKTQAQIAEIVGLSQMHVSRRLAAILTTLR
RQLVGDH
>Tfu_2075 Tyrosine protein kinase:Serine/threonine protein kinase
MPHGFPSDLPPLHPSDHAIRIPGYDLVGRLGSGGMGVVYAALDPQGRRVA
VKLMRTEMVPDISQQRRRFQEEVRALQRLRDKHVVPLLDSGIAAGRPWLA
TAYVPGRNLQQCGKLSGQRLFLLARGVAAALCAIHRAGIVHRDLKPSNIM
VYSDGTPVVLDFGIARSLGAAGLTGTGAPPVGTAGTISPERYRGVSAPPA
DVFAWGCVVVFAATGQLPFTAPSPEEVMHRVLHSPPELHGFRGPLADLAV
RAMAKNPAERPTAEQLLKELDALGSPRPFAMPRVSRKTGDAATLLVLEMQ
QHYANPVPWLRRNQERILGEARRMGADRGLRDLVHRAAEARLRAAELDEA
LAEIASLLAPHERPRYRGYPVDEDGLVALASGGAREQALLRRLLGERSVI
VEKYAAQHICRHVLCVSKHFGRGCRVLRRLRSQVVAVVDRTWEPLRELRH
QIWAEHDALGHPRILLPPDQELVDRVYATALLVRRRTDELDRHRKAVLAL
QCPTCWWASQQEAVVQADPNTDKGLAHVVIASVAADTARRFAEAVRQG
>Tfu_2059 regulatory protein, MarR
MGTKAGTDTEQITDEDLITCWGLFHEALSETTPLLLQGIAPCGKDMSGPW
FEVLLRLQRSPHHRLPMSQLAREVSLSSGGFTKLADRLERNGYLVRQACA
LDRRVTYATLTKKGLDLAEQARTKHVALLREYVLAPLGERGVRALAEQAR
KLRDNSRHAREELGKG
>Tfu_2074 Tyrosine protein kinase:Serine/threonine protein kinase
MSRRSERTISVLVPPDLAPTAPEDPRTIGPYVLVGRLGATETGSVYAAVH
PDVEPEALLAVKVIPSSRVADEAARTRLEQRLRTLGAVDGRCYVPPVAFD
VHGTPPWLATRYSPGTPLKQYIDQRGPLRLGRLTALAAGLGEALSALHSL
DVVHGDLKPSSVLLSSAGPRLLDCALSGEAPAPAGSTPWLSPERLRGEAP
TPASDVFSWGAVLAFAATGKPPFGTGTPEEVAERIASGSPDLSDAAEEIR
SLLESALAADPAERPNIRELVRSSISLWESSLGTVGSEAGPGSGVTRVLT
REWQGIVEPALLPRVVHLDDRARGKKSGLRSLTMPVPLLSRSTAQPASSA
AAADAPDSTGPTSSGAAATAVTAQEDTEANTDTPAKAASAPSSSSSAPAA
PPASSPSTGPSGSKGPNKRFLALVGGGAAAALLLLGGGVWAVSALRGDDP
EPQDVTAQPDSAPEEAPQEEPPPAWDTGTLVVRLDSSSDVHLLAGPWPYT
PVKPASGDDAFAGLNGREVTPEEWSEAWAPVPGVEEPLEALIASDAEVMC
AHFCLNPDQVYVDEEGRGTYKVTGRDLGNYLSWGDAVIAEVTFGEPDPET
GLPVITKVTELYPLPTA
>Tfu_2272 putative septum site-determining protein
MNAYQVMIGVPSDDLENALLARLAEISDIEVVSVYRSSHDITDALTHFPS
LDVVLIHEDLGPLPVLDLIRDISRNRPQLAVILVSDEMSPDLFTSAVEAG
ARGLLHSDATIEELETRVSSAAEWSRTLRRHLEAASLDLPIGGRRGRIIS
LTGAKGGVGTTTTAIHLARIAARNGQAVCLVDLDLQSGDIPGYYDLKHRR
SIVDLVDAADDISAAMLAETVYVHPDGPHILLAPVHGENGEDVTAHAARQ
ILGALRSRYDMVIVDCGSAVDDATAVAVELSDTALILITPDLPALRAAQR
LIAMWERLQVRDPKNVTSLLVRHSRKNEIQPEFARKLLRAPMLRTVIPAA
YRALEEASNTGDPSRLTDESLLKAFGKIARELGLLESAEESAAEPPTGVT
STADAAEAMLARSRQFHGRSDTGASMVEFAALIPLLGLAFLLTWQLVLIG
LTGMYAAHAANEGARQAAITPDDPELILEEATRRVRSPWDEEGTFHLERI
TVEGREYVEVTIAMPMVLPGLDSPWEISSRSMVFPER
>Tfu_1334 RNA polymerase sigma factor
MPHREDSGTGPLTGAAVGAVLLNQARDEEVDMTTNSTTARRRSPAHRRGG
VVRPPAPQSRPTGQAERLLAALADHQDDEETSARIRDELVRLYMPLVRRE
ARRYRNRGEPMDDLYQVGMLGLMKAIKGFDPSYGKPFVAYLLPMVTGELK
RHFRDTTWAVRVPRVHQERRSELNRVIAEFTQKHGRTPTTREIADALEMD
LESAIELIDASSAYSALSLDTPFGDTEDESALGDTLGVADGDLETVVDKT
SLKDALDRLPERERRVILLRFFGNKTQSEIAADVGLSQMHVSRLLSQTLR
QLRRELLS
>Tfu_1664 iron dependent repressor
MAPVANRPSTSVEDYVKVIYDLQERGSGPVTISRVAERLAVSNSSVSGML
RKLGELGLVDHQRYGDVRLTPTGDKVALAVLRRHRLIELYLVEELGYSWD
EVHDEAEVLEHVVSDRFVERIAERLGHPTVDPHGDPIPTSDGRVPTQETR
LLAHVDPGSGGTIVRVNDSDPALLRYLASQHIGIGMRIELVERQPFGGPL
VVRLHTDEGVEERSIGTGVAEALWIATDH
>Tfu_2567 cell envelope-related transcriptional attenuator
MADRPHPYDRAPGGSSGSHDRTGVFRRNPDGGLPDRIDSLYRPEPAARSA
SDAAATRRLSRTSGTPPRRPTPRSRGRDSGGWERRERERRARRRKKAAVL
VLVLLLLLPTVGYLWANSRLNRVAALVPYEGRPDDQPGTTYLIVGSDSRE
GLSDEDMEALRTGKAEGKRTDTIMVLYVPTEGRPAIISVPRDSYVEIPGI
GANKINAAYAEALGGGPATLVRTFEQASGVRIDHYVEIGFAGFVDIVDAV
GGVELCPEEAMEDPKAGLDIEAGCQVMDGPTALGYVRTRATPRADLDRIQ
RQREFFSALIQQATAPSTLFNPFRSIPLVLSGTSTFSVDEGDSLMDLAWL
ALAMRDSPATTAVPVGSTPTLDVGSVVLWDEARAEEMFAAMREGRPIPES
AMQD
>Tfu_1420 hypothetical protein
MQTSLDTKTRSGFSGVLRFRYIGPFEVDELAELWKPLHQQHTTIASHLED
LLGTVSAEESWRRRSRRYVEWLSEPETIAVIAESDGVDVGYAMVTIRDEH
HGSWDRGDRVAVVQTLAVHPDYSLELVGSGLLDEVRRQLAETGVRDLELP
AVSGNSAAIRFYESQGFRPFVTTMVSRIGVGPHD
>Tfu_1266 helix-turn-helix, AraC type
MKQQRKEIQVLDRLNQAMEYIERHLDQRIEGAELAQIAATSEYHMRRLFS
ALAGMPLSEYIRRRRLTVAGAEVLAGDRTLLDIAVRYGYGSAEAFARAFR
AMHGVGPGEARRTGAPLRSQPRMSFRLVVEGSTDMRYRIVEKDAFQVVGK
KARVPLVYEGPNPAIVEFVRSIDPGTLQRLAELSDQEPRGVVAAVANIAG
ERVSAPEGTELDYYHGVVTSAPAPEDMAVLPVAAGLWAVFEVEGEAPYAI
QYLWRDVFTQWFPANPYQSVPGPELLRTTMSQDGAYVEAELWVPVERVER
>Tfu_1422 putative LysR-family transcriptional regulator
MIDVRRLQVLRAFAEHHTVAATAEALGVTPSAVSQQLAALAKETEVPLVE
RSNRRFVLTGAGRVLLERAQVIFAELERAQADLARYAEGSLGSVRVGAFA
TGISNLVAPAVARLRHTHPGWDFSVIQAEPEHSTELLCTGEIDIAVTMSS
PHLPATGSPGFQFHPVMVEPLDVVLPYEHPLATKMELDLATDLNDADWIM
SAPGTVWFDTVAAACHQAGFHPRSTHVVTDFSAAFALVAAGLGVSMVPRL
AWHGIAIAHMVVRPVRNGPRRHVLAVTRSGANPEPLLTAMREAAHRITVP
AGRFVLSA
>Tfu_0767 regulatory protein, LuxR:Response regulator receiver
MIRVLLADDQALVRAGFRALLDSAPDISVVAEAATGAEAVRLAVAERPDI
ALLDIRMPELDGLAAAERILADPRLSSTRVVILTTFDLDEYIFEALRLGA
SGFLVKDTEPEDLINGVRVVARGEALLSPSVTRRVIAEYAGRPRRPAPDR
RLRDLTDREREVVALVGEGLSNEEIAARLVLSPATVKTHVSRAMAKLRVR
DRAQLVVVAYETGLVAPGWMQ
>Tfu_0191 similar to N-acetylglutamate synthase and related acetyltransferases
MAGRRPWSQPIPKVLRAGTGIVRPWVQGEAEDRGKGAAEPQAKTAEPARV
RKRAAPLHHPGRGRCRGGRERAPVQRISPAHSMARSMTGTVPTGTDRYPC
MPQYGASSGISPLWATISEAMIIREATRSDLGAILRLLRELGEEAPAQGG
TVRMSSATVRAWTRIENDPERTVLVAERRGQIIGTLDLIMIANLTHDAQP
WAVIDNMVVDAAYRRTGIGRALVEEAINRAIQAGCYKIEMLTHESQGSAY
EFCRAMGFTIATEGFRRYL
>Tfu_0907 regulatory protein, DeoR
MRVPQCTPAPNRIERGQKMIPDQRREHILKLLQERNVLSISELTSMLSVS
HMTVRRDIQALENEGKVLSVTGGVRLAARLKSEPSYLAKAQLEVPAKRAI
ARAAAELVRENFTIFLDAGTTTLQMVPLLTDKAGLTVVTNDFNVVGHLME
YPNIELIHTGGVVSHADHSSVGQFTAEFLRRVNVDIAFIASSSWDVERGS
TTPSEAKVVAKQELLRVASKSVLTVDSTKYGKFGTFTVARLEEFDLIITD
DRLPANAVQQMRERDIRLQLVPLN
>Tfu_2299 regulatory protein, ArsR
MVIMLTSDQRLSAIRRLGRALADPTRCRLLLVLLDGPAYPAQLAEQLGLT
RQNVSNHLSCLRECGLVRASSQGRQTRYSLVDDSLRHALEDLLRVVWGVA
VAHVPPGETVPVPID
>Tfu_1336 putative Sir2 family regulator
MAATVNISDVGQWFAESERTTVLTGAGISTASGIPDFRGPQGLWTRNPGA
AAMFDIDIYRSDVNVRREVWRMRRDSPALTAEPNDAHRALVDLDRTGRLL
AVITQNIDGLHQKAGLAPERVLEVHGTIHEVECLSCGRRVPTPDVLARLD
EESDPRCLACGGIQKAATISFGQRLDPDVLDAAITAAKDCDLFLTVGTSL
TVHPVAGLCDIAREHGARLVIINAEPTPYDEVADAVLRDPVETVLPELVQ
RAVSTA
>Tfu_1397 regulatory protein, MerR
MVDGRVHRQQTNVVHDAPTAVVDAAHAPAYRRGSEAACGVENKSCCLPIV
RYRRRPGSRRFGVAGISGKQNASEYRRSPVRWTGEECLLCDEDVVGLPMN
VGYRGPTACMAAGITYRQLDYWARTQLVEPSVTVPGSSPAHRLYSFRDIL
ILKVVKRLLDTGISLQQIRTAVEHLRQRATADLAHITLMSDGVSVYECTS
PDQVVDLLQGGQGMFGIALGRVWRELEGKLSELQGEPLTEQARIAMEAYP
RDELAQRRRQRRTG
>Tfu_0241 regulatory protein, MarR
MLMNQPHPSTPASTDASLAAALRMAVGRLARRLRAQRPDSSLSLGQGSAL
FTLARHGTMTPGALADHEKVQPPSMTRIIAALEERGLVRRRRHPDDGRQQ
LVEITEEGIQLVQADHQRREAWLTRQLAELSHEDKEVLRRAAEIMDRLSQ
S
>Tfu_2943 regulatory protein GntR, HTH
MVNMSGLEFTPPKYVQIVRTLQERIEDGTYPVGEKLPSETRLVREFGAGR
STVVRALQILSMQGWIEREHGRGSFVKGVPHQAVERSRAGASAFEAPENS
KSDRIVRAGRMSIPATIAEVIGLPENAPAIMRRRLVLDDGKPSELVTLWF
PLDVAEGTDLGDLAPISIGAREHIQRVKQLRPSLVFERLSARLATDEENE
LLGLEKGTPVLGILARIVDTSGEVLAVAEVVLPGDLHELEDSYSAV
>Tfu_0776 transcription termination factor NusA
MDIDMSVLRSLEREKDISVDLVVKAIEDALLIAYRRQEGPDTNARVELDR
ATGHVTVWAEERDEEGRLIREYDATPSGFGRIAASTAKQVILQRLRDAED
EITLGEFAGRESQIVSGVVQQGKDPRNVLVDLGRVEAILPPQEQVPTETY
THGERLRAYVVQVRRGHRGPSITLSRTHPNLVRKLFELEVPEIADGTVEI
AAIAREAGHRTKMAVKSNKPGVNAKGACIGPLGSRVRNVMNELRGEKIDI
VDYSDDPAQFVANALSPAQVTHVEVLDAAARVARVIVPDYQQSLAIGKEG
QNARLAARLTGWRIDIRSDTEMAEQHGEE
>Tfu_1501 similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
MPPGEAGPPPGAPGLLRAESRGARAQPPLAAEVTKIKPTKQVDLIELLAH
HGAMLTSDIHRPVRDADAALPHRDEERLLGVIPLTDRRKVMVVVGHVVEA
ANGTDSTATGPLNDDALVIDRDSWQVWAYGKPVSLSYQEFRLLAHLASAP
GRVFTRQELLDQVWDPEAHTTARSVDVHVHRIRRKLGALGERLVTVRRVG
YVYRPR
>Tfu_1232 hypothetical protein
MTGQVSWDHDPLASPDSPDKRPWTAKGLRARRRILAAARKCFAEVGYEKA
TLRMIAAEANSDKSSVIKYFGSKEQLFRECVYWTIPIDELTADAPDQSAE
NYLRSMLSAWARDPHSPMAVLLRVSMTNKEAADLLRSHITTHSVERVMKH
MKGPDPELRAGLFAAMMMGIASGRYLLRIPGLAEAELDDVLRVAAPAIRA
LIAVEEGTDSTEEKQDRT
>Tfu_1608 putative xylose repressor
MIGRTRDPNKAEVGDVRATNLAVVLRCVREQGPCSRADIAAATGLNKTTV
SSLVSELLRRRLLRETGTTENRVGRPAIMLALDGASSAAIGIEVNADYLT
AVAVDLAGRPVLSWRRAFPGNTVSPARTVTAVTALIRRVVTRIEHDGRQV
LGLGVALPGLVDPDGRARLVPSLNWRNVDFAAELVDALRGPGFPVEIGND
ANYAVLAEHRFGEHAGTRDLVYLTGGTSLGAGLLVDGSLRRGHSGYSGEA
GHIPVPAPGGTAPLETVASITAIARRVLPDDTRDDEHLSLAEIELRIDEI
VARARAGDPTTLTRLHDAAKDLATGIFTLVSVLDPARVILGGYYAELAPW
LLPVVNDLLDTRGIPADEPIAVASTLSLDAPALGAAARVLDAVEQGRLPD
NTTPARALAAAARAPR
>Tfu_2830 putative TetR-family transcriptional regulator
MNHSHGERTAESSRPAILLAARRAFALHPYADVTIRSIAADAGVSAALVI
KHFGTKEQLLRASADFTKAVELLLDAPLDRLGEHMVRTLISLRERNGADP
LLRVVFSTSAQDERAVVREYFTTQVTEAMADRLTGPDARLRAELVIAHLL
GLGATLNIHYRATGRTPDTERIVALYAPGIQQLITGP
>Tfu_0974 helix-turn-helix motif
MQRSYSPTIRRRRISAQLRKFRKQKGLSAAAVGEKLGWPQQKISKIESGE
QKRIPAAELDALLEVYGVTDPQIRESLHECARLAKERGWWTRYKDAFPSG
LPDFESEASVIRSYECQVIPGILQTPDYADAIFRAYKLREDKEIDRLVKA
RMERQNILNRVDPPHFMTIIDEAALHRLVGSVEVMRTQLRHLTHMASRHN
IDIYVLPFKAGAHAATTGSFMIMDFPDPMDNSIVYVDTPTSILYIEDEEE
VREFNVMFSRTQSAALSPTLSMDLVKKVIKSLEE
>Tfu_2845 Tyrosine protein kinase:Serine/threonine protein kinase
MSNDSPQLPDFLLAGRYRLHRLIGAGGMGRVWEGVDELLDRPVAIKELTI
NEHLPPQEIEILRARMLREARSAAQLSHPSIITVFDVVEKDGFPWIVMEL
VHGKSLSEIIKQEGAISPERAANLGLQVAAALSVAHQRGIVHRDIKPGNV
LVARGDRAVLTDFGIAYLEGSSRLTRTGSLLGSPSYLAPEQARGEPASPA
ADMWALGTTLYAALHGAPPFQRATPMATLTAVVVDEVPPPVKAGPLRPLL
EQLLNKDPQKRPTVHEVVEELQRVVMSFPPQSSSASSTGTHTLQEEASPA
PAEVSVAKPAADTSALPLSSPAEPGKRNSTLATVGLVALALCVVVAVITA
VVLFVPAGGNSRADGEQPAAETSQSSEETGQAEEPEPTTSAEAAEQGVGE
DDEDSEEEAEDDDYSGPPLVRHEDPTGFSLDVPEGWSVDRRGSSVFFRNP
EGGYLQVDQTDSPNPDAKKDWEAQERGAAGRFSNYSLIDIRYSDHPSMER
YVTASDWEFTFTINGQRMHAVNRGFHTEKKGYALFLVYPADGWEETGAPL
LDRMSESFEPAA
>Tfu_0029 putative LysR-family transcriptional regulator
MLDLTRLRVLCEVARLGSMSAAARALSYTQPAVSHHIARLEAEVGTPLVV
RHGRGVRLTEAGRVLVGHAEAVLARLDTAEEEVAAIAGLRAGRVSLAAFP
TATAGIVPQALATLRERAPDVAVTLVEAEPPESLDLLREGEVDVTLAFSY
DETPPDASTGIREVTLCREQVRLLLPGDHPLAAEHTLELAALRKETWVAG
CERCRSHLVHVCRRAGFEPRIAYTTDDHLAVQRLVSLGMAVGVLPQLALL
LHQGENVAVVDSPELGWRRLFVAVAGGTIPPAAAALVDELTAAVGQLNSG
NQAGS
>Tfu_2526 cell envelope-related transcriptional attenuator
MPKRSSSRRSAGSRALQRKLSLGGWVAIGATALVIASSLTAYGAYYDIYG
NISQETVDTDAWDRPTKVEGAINIMIIGSDVRSGANAEYGGEIEGERPDT
LLIAHISPNHDGAILVNLPRDSIVDMPACEPNGDRPGMEAHRGMLNSAMN
YGGIQCQWKVVEQLTGIHIDHFVSVDFTGFKEMVDAIGGVEMCIPHPIDD
PKAHLKLDAGRQTLNGEQALGYMRSRYGQGDGSDLSRIDRQQVFLGAMLR
KVMSGEIMSSPSSIYAFLSSVTDSITVDDQFTVDKMTDIAIQMREVDMSN
IRFVTVPNGAHPDDANRVAWTQPDADRLFQAIANDTEITDEKSDDEEKDE
EKEDVPTVDPAEVSVEVINGTTTSGLAGTVGEELQARGFVVAGTGNPQGS
VPGRTTVFYGPGMEAHAHTVAAQVKKAVVEESPYLGSTVQLVISMDWDGL
KGQSSGDSSNVLDSLNAKTAEAPEDDAC
>Tfu_1271 PAS:Protein phosphatase 2C-like:GAF
MRHQAEHGKRSGQAAAADPLLVEKVLTGLDIGIYVTDAQERIVSVNPRAE
EILRWSAALLVGSNAHDALHRSANGTLLSPQECKLTQDYQHEFTIRAGSA
WFMCGDGGLLPVVWLVAPYRLENGDPGTAVLFHERVFDPEMFGTYDPDHV
AALTANLSLISATTTVLTSHVEIAEALRQVVQLVLPRLADWAIVDLIDEH
GHVRRAAAIHYHDNRHVRVEELEGSLPPVPPESQMPLSRVLKGAPVSRIS
PEDYSVPPDAEMAVVQRRLFATTGMHSAIAAPLRGRGGSILGVLTLGRSK
ERPDFTSTEITLVDDIAHQAGLALDYEQQRRVAETMQRYLLPQLPRIPGL
EMEARYYPAPQSSRVGGDWYDAFTLADGTLTMVLGDVTGHDLRSAAQMAE
IRSMLRAFAWDHTSTPGEIVSRLDQALVTLDAPTMATLIFARLERTADSS
WQLAWTNAGHPPPLLLDRDGHSRFLDAENDPLLGVVPFARRQNFTTTLTP
STTVVFYSDGLVESAARPIDTGLESLRDHAARLAHSSLADLCDGLISRVR
AAGHDDDVALLALRVTDPQMVPCTPKTQINSASPT
>Tfu_0798 helix-turn-helix motif
MMVLLRHLLGDVLRQLRQRQGRTLREVSADARVSLGYLSEVERGQKEASS
ELLASICGALGVPLSQVLREVSDQLALAELQEAALSGSVPADSAAGPDRL
GIDSTIPDRVPEVVDMVGV
>Tfu_0454 Tyrosine protein kinase:Serine/threonine protein kinase
MAQPERFGRYRVLRRLGSGSFATVWLGHDDLLDTPVAIKVLAENWAHNLD
IHQRFVEEARILRQADSEWLVRVHDIGTLPDDRPYFVMTYADRGSVADRI
AQGPLPLDEALRLLTEIGQGVTVLHRHGTIHRDIKPSNVLLQSSPVGERV
LVADLGFAKSIDGASGFTASAGTPGYMSPEQSVVGGDIDVRADVYSLGAV
AYELVTGKRPPSPPVRVPPSRLRPGVPPALDELIMSALSPNRSDRPPDAA
TFTSRIREIRMSPDLELATPWWQRYRATWTRLVALVATAVAVLGVAPAAS
ASPHLPMMEIYDASGELHVRVPTPWLRQMQLNGWSPRELGLPGGHEPGLL
VATDLDAWSDARQSVSGLFAGLFVSDGQSPDLDRLISSGLCSGQPQRQRF
TNAHWDGELWQWVDCSPDSSEGDVFTAAVLQHRGQERTLYLEIRQTEHQP
QTVAEILDGLRLIS
>Tfu_0234 Cold shock protein
MPTGKVKWYDAGKGFGFLTKDDGGEVFLHASALPPGTTTLRPGQRVEFGI
VEGRKGTQALQVRLLDTPPSVAKALRKKPDEMVVIIEDLIKLLDNVSNTY
RRNKYPDRREATKIAKVLRALADDIEL
>Tfu_2793 regulatory protein, ArsR
MRTPGIDPGEHRVFADPSRVAVWEALRRAPGPLTVQDLAQRVGLHANTVR
GHLAILAERGYVTSAPEERDQPGRPRLLYSAVTDETAALRNYRLLAEMLV
DYLAETAADHAAAAIDAGRSYGRRMVHAPQAGERVDADTAIRAVATLLDQ
AGFRPRRSAAGIDLHRCPFRELAESAPDIVCGIHLGMMRGVLAELGAPVE
AVRLRPFAEPDRCVAELRPRKETE
>Tfu_0872 regulatory protein, ArsR
MPVPLYQAKAEFFRTLGHPVRIRVLELLQEGPRPVHELLADIGVEASNLS
QQLAVLRRTGLVVSHREGNVVRYELSAPQVGDLLRAARTILTSMLVDQGE
LLAELREAEREGQR
>Tfu_1711 regulatory protein GntR, HTH
MPEISPIRPQALGDQVASELRRLIITGRYAPGTPLVESHLAAQFDLSRGP
IRDALKILAAEGLIDTNRRSATVVGLSGADIDELFSLREAMERLALRIAL
DRDRASLVAGLNRALHAMRRAAEEHDPTAFTAADLRFHSVFYDVAEHRRL
GDVWAQYRPTIEMLLLASNERYTDLTPSVRAHELLARLIEEGNPEAVFAE
LHEHLDNARRRLRQPYTAQETTSAQE
>Tfu_2240 helix-turn-helix, Fis-type
MGSDARRPARAPDKIDQAIIDALAQDARIGVSELAEMVNISRATAYNRIK
RLTDEGVIRGYSAVVDHARMGLGITALILISGSQPDWRANREIISSYPEV
EYCWYVAGSADIVLLVRLANTDQLRDLILTRLQSLPGVNSTQTLTVIDEV
VHRTVVRPPQDC
>Tfu_2044 conserved hypothetical protein
MTGLSTSDPGRLLRPFALALKDSDDTALVLDLASMVVAVHPPEEGYETAP
EQEKILRLCAVPHSVAEIAAALDIPPSLARLLVSDMVAEGALRVGATPDP
RPTDSLLQAVLEGLQAL
>Tfu_0880 regulatory protein, MarR
MGVRIVNSSDSSLGDPLALENQVCFALTIAARNVVALYRPVLAPLGLTHP
QYLVMLALWQYAPVSVKELATLLELDSATLSPLLKRLEAAGLVRRERNPD
DERRLMVTLTPAGREMQEKARDIPERMMRLLGMDPEELRHLNAVLSRLNA
AATSADLTDAES
>Tfu_1817 regulatory protein, LuxR:Response regulator receiver
MPVRVLLADGRPLVRAGLRLIVESDAQTSVVGEAAEVRTALAAVRQLLPD
VVVADAELPGGGGAVLSREVRQWAADSGQTVQVVVVASSVAEGTAFEVLQ
AGARGLLLRDSSPEELVRAVREVARGNAALCPQVTARLLDRLAALPAAPQ
ASGPAAEVARLTRREREVLRLLGRGLTNAEIARQLVLGETTVKTHVGRVL
AKLGLRDRVQAVVYTYEHGLVVPGEGAGDGRSSRGE
>Tfu_1514 Tyrosine protein kinase:Serine/threonine protein kinase
MAEQTVIDDRYELESMPIGEGGMGEVYRAHDRRLDRKVAVKLIRFPFGQH
DETLVKRFLHESRIMARLEHPGAPAIHDVGVFDDPRVGSRPFMVMQFVEG
ISLDYIIDEHEDIPVSWVASAAAQVAAVLAAAHKRGIFHRDLKPSNLMLC
HDGTIKVLDFGLAMFHDPDVSRLTRTGTLLGTPSYMSPEQVQGATLGPQS
DLYTLGLVMHELLTGQRLFDGRTEYEVFHRQVNEPAPSVRTTRPEVPEEI
DRLVLRLLEKHPADRPADAVEVCRALLPFTQGAGFLPGTVAEGSNPIHLY
SAVVGSMTDTVGPTIPRKTRGGPVDLDQVRQVAVAFAHEARYNQAATLLE
AVLSAVVPALAPDDPQVLTLRGELAEVLFKDSDYRKAVPIFAELHQVLAH
HRGPDDEQVLHYRHREATCHALMGQTTEALRLLRALLADQQASYGPYDQR
TLNLRRQIGLMELGAGDTGGARRTLLELLDDLEQHYGPDHPDTVKVRESL
QRISG
>Tfu_1646 putative TetR-family transcriptional regulator
MAGRTEGRGVVAAALRLFDEKGFEATTMDDVAVAAGVSRSTLFRRFGSKD
DLLFADQEELVEAVRTHLASSPEDPVSAVCSAARMVLRSYTSQPDLAVRR
YRLVRTRPALRDREIAMTARYQSLFTQHLTGGHSDESRVLAAEVVAAAVI
AAHNHVLRMWLRAPEVTSPSPLERLDQALAFVVDMMAPALRRSGEQRSDE
RGDRAVLVAVYPAGASHEEVLARVRAALESPRN
>Tfu_2361 Tyrosine protein kinase:Serine/threonine protein kinase
MSIEQPPTERPKADVTGRRPSVTVDGQASGSERVLAGRYVLREPIGRGGV
GTVWRATDLVLDREVAIKELRLPDDVTEDERNSLLRRTTREARVAGRLSH
PNVVTVLDVVNEDGRPWIVMELVEARTLAEIIDIAGPLPYPRVAEIGLQL
ISALKAAHDEGIVHRDVKPENVMISEDGRVVLTDFGLAAWTGESALSSSG
RIIGSPSYLPPERAKAGPVGPASDLWSLGATLYAAVEGHPPYGRKGYIAI
LRGDDVEEPPPAANAGPLAPVLAGLLKVDPNERLTAESATAMLRIASLAP
WAPETSPETAARMAEAVRRQQEREKLSAVDHFRAGAEVLRTNLQEQVSHV
SDALQRHRPESVSALLTAIRESTDALGLTSSGKHRSKRSRKKQAVIVAGV
GLFVLLLLSVVLWALVFRT
>Tfu_0476 similar to ATPases involved in chromosome partitioning
MDLPTYTRIWRIEKRLYKLYDFRLPVPVSLVTIGVFVGTSVVWCLLMGLL
GVPFHTPWHVVWLVPPGVITFLATRPVIEGKSLTELLRSQLVYATEARVY
TRLVPQYEPDRIIVTARVWRRDPAAGPLPGLGRTTIRHTEPETEVLEASA
REDHSEPAATPDGAPAASPTPTPAHHEPEERRSAQPPLFRRVLNYFGFAL
PENPPARQEEPAPAPLTSSTAAARRAELAPRKNRDDAPAFRTGRDTGDTA
TGNDDHPSTAAETVAVPAGDTQPEPQDTDAHAREPDAAATRDEEERRAAE
ERAATRRRAEEIMAAPEPEPTLAAESAPAPNTEPDAEPTSTADVPTQPSR
ADDFADDAAEKAHRKAKRRLRGRAQSHVIARRMQRARARAEAHEAQAAAH
PTPTEEPQTRSEDIRAAAEPVVRGTAEPALQTGQGTALPAPAEEPRPQRR
SNRPRPHAAPWDLPPVARTSDTGVPAPKPSPAPSPWEEPRDTADVSAAED
AAVVPAEPAVPAEPDPQADSGTPEDTGPEPAPAAPSPTAADSDEPAAWEE
DVSATLPSLAEQIRAAGSGKPRLEIDHGTGELDSFVDAVRPRRGEEESAA
SRGGEQPESVQQAGERSAGRSASGKPRLEIDHGTGELDSFVDAVRPRRGE
EESAASRGGEQPEPVQQAGERSAGRSASGKPRLEIDHGTGELDSFVDAVR
PRRTEEELAAIEQAALRSRGFTDPAERTTPADGDNRDPLPRRHSNRLARG
VRSAGQAPQRTPDTEPEPTTTGSDTDRGLFTRFVDNARKVGGILTPARGT
STPDQHTDEAEKRPAPSKPDLQLDHGTGEQQHFTGATPPRGGTSAGTKPA
SLKDASGTRGWRRLARVVTGGHSANAKPQLSPAEMERLRKPLAGSRGVVV
LGCTGGAGQTITTLMLGHTLAAYRDDHVVAVDINPGPESLSRRIRTETPE
TLTSLLANTDALHAYSTLRDYTSRTPSGLEVVATLDDPYVQTLDDRDYVT
LTGTLRRHYQIILLDPAATGVARALPVVDGLVLVAPASADAARSVALTFE
WLDGHGYTDLRSRSIVVINGVSRRSLTDVDAAEQVARGNCRAIVRIPWDD
HIASAQSVIEVRSLRHTTRRAYAALAAVVADHLSHTGHQRSETAAPTPLR
RPTSAQEESR
>Tfu_2953 putative transcriptional regulator; RBL02063
MGVLPVTDGETGFTAELGRRHADLFEAFYQHPFLKGLREGSLSREQVLHY
VAQDYQYLTAYTRCYGLGMALSPDRRWMRFFHDNAAVILCAETHAHESLC
AYVGVSYEEAQADHLAPTAQAYINHMMEAGRDTLGVLLSALLPCPWTYLW
AAARFTSETPLDPSHPFYGWWDFYAGLYESQKLTQTRAMLDELAAAAGPA
ERERMERAFVASCHYEIRFWEMAWSLEDWTPPNGS
>Tfu_0273 glucokinase ROK
MVFTRTTGRRTRGLVIGIDIGGTKVAGGVVTPAGHVLDRIRTETPDRSKS
PKIVEDTIVDVVEQLRRDHRIQAVGIGAAGFVDARRSTVLFAPHLSWRDE
PLREALQDRLGLPVIVENDANAAAWAETRFGAGRGVRDAVVVNLGTGIGG
AIIIDGALRRGRYGLAGEFGHMVVVPDGHRCECGNRGCWEQYASGNALTR
EARELAAAHSPMASRLLDAAGGDPAQITGPLVTALAREGDRACIELLEDL
GAWLGAGLANLAAAFDPELFIIGGGVCEADELLLAPARAHFHRALTGRGH
RPEARIVRAALGNDAGLIGAADLARSLPLRGLRLPGGAARSRLFFRPPGP
RPRRSGVRGVD
>Tfu_0559 RNA polymerase sigma factor
MSERGPALTAQTEHSTPDRARARELFERLGELDPDSPERQRIRDELVELH
LPLVEYLARRFRNRGEWLDDLTQVATIGLIKSIDRFDLSRGVEFSTYATP
TIVGEIKRHFRDKGWAVRVPRRLQELKLSLTKAVSELSQRHGRAPTVAEL
AEYLKMSEEEVLEGLESANAYSTVSLDAPDNGDEDAPAVADSLGIMDESL
EGVEYRESLKPLLERLPPREKKILLLRFFGNMTQSQIAAELGISQMHVSR
LLARTLAQLRQALTADD
>Tfu_2229 Tyrosine protein kinase:Serine/threonine protein kinase
MTRNGHERAKPLRPGDPTELGAYRIVGRLGRGGMGTVYLGKDTAERLVAI
KLIRPDLSEDPAFRQRFAREVAAARRVARFSTAAVLDAQLEGDPLFIVSE
YVAGPNLAEAIQADGPMYGGTLESLAMGVAAALTAIHGAGVIHRDLKPAN
VLLSSVGPKVIDFGIARALDDDTAVTRSSQLMGTPAYLAPELIAGEPPTP
MSDIFSWGCLVAYAGTGRAPFDAPTVPAVLHQIVAGQPNLSGLDPALREL
VESALDKFPDNRPTAQQLLSRLVGQEEMSLDAVHETVVRSWTPPATSRPE
AVPSGPNPAAVPAQVGAAAAAPPTQPGTTPPGGQPSATPSAGHPGATPPA
GQPAAAPPFPEHSPQTPPWAAPTPPGGNGTEQKTRGTRFSPAIAIAGGSA
VALLAGAVIGGLVLFRSPEVPEGMQVYADDFTHQDGWAGYDFDPENTFSW
SGYYQGGYALSADGDTRTSTVSVAPPAGLPEQVRVSATTQVVSGPDYGTY
GLHCFYNDDGDNVTYYSATVRVDGSAAQIRRHGGEQGSTHLEEVTAKPVS
GFLTPSRDAEEAPVNTFDFTCELDPEADTVTLNLWLNGEHVLEAVDTNPL
PYDGEDAPQAGMLAGRGIGGGDNIVVVFDDFAVYQLDGGQRERS
>Tfu_1740 putative LysR-family transcriptional regulator
MLDANRLRVLVEVARAGSITAAAERLSFTPPALSQQLAKLERELGCALLE
RGRNGVRLTEAGRVLLDHGERVLGELREAERAVRATLGQHPSTLSLGAFA
SAGTTLLPSALAEFRRAHPHVRLALSDVEPPDGYGLVTSGDLDLLITHCY
PGTELPSATGLRRERLLTDPLMLVLPDGHPAIDKPRITLADLADEEWICG
APGIHNRIALETAAAEAGVEVTVAYETRDYEVTLALIRAGVGIGLVPATI
LRTHPEHQWHAHQLSGTDLARTIFLVYRPRLPEPVAAMAATLRDAARRAL
A
>Tfu_2542 cell envelope-related transcriptional attenuator
MNEDGNDTPRPLGEVPEFRRIRSGPLPPHQNIPPRRRAPADQLPWLPSAA
ARRRRAALLLCGFLSAVVLLVSGSSWAVTGWLSDQLHRYDVFTGLLDENR
PPASQGALNFLVIGSDDRSGLDSRQRSELGVGNVEGRRSDTMMLVHLNHQ
REHITVVGIPRDSWVRIPGHGPDKINAAYSLGGPQLAVQTVEAATGVRID
HYVEIDFTGFVEVVDTLGGITVCLPEAIHDEKAHLSLEAGTHRLQGTQAL
AFARTRKSPHGDLDRIDRQQQVLAALLDEALNAQILSDPARLAQFVETAL
GSITVDDTLDTAALIQLGTQLRSLGLDDVTFTQVPVDRIDFWTPSGEVAV
TWHEQHATELFTAIAADRPIPQPQSAEDSALPSPDEVTVEVYNGTTIPGL
GAQVRVELLESGFQVPESAGNWPQQDLAETLVRYSPEREDAATLLVESIP
GARAEVDPGLGGRVQVIAGVNHTGVAVPAHAASPIAEQPVDVGGRETVHT
RTAAENVCR
>Tfu_0249 iron dependent repressor
MTAQGLIDTTEMYLRTIFELEEEGIVPLRARIAERLRQSGPTVSQTVARM
ERDGLVRVENDRHLVMTEEGRRLATQVMRKHRLAERLLVDIIGLPWEDVH
VEACRWEHVISEAVEERLIGLLKEPWTCAHGNPIPGLDELGVEGYEPEPF
ASSSIVPIPEALSDTPTRVTIRRISEQIQSDTKTMLALKRTGVQPGKEVT
LEASDDGVRVIGGNGKDGESIELPRQVASLIFVTRV
>Tfu_0625 regulatory proteins, IclR
MDNSSPSSGVGVLDKTMSVLTALESGPASLAQLVRLTGLSRPTAHRLAVA
LERHRMVARDSQGRFILGPRITELSIATGEDRLLAVATPILAQLRDHTGE
SAQLYRRQGDVRVCVAAAERMSGLRDTVPVGSELPMTAGSAAQVLLAWED
SERIRRTLRGAHFTAATLAQVRRRRWAESVGEREPGVASVSAPVFAPSGR
IIAAVSVSGPLERLTRSPGRLHAPAVLAAANKISEALRHT
>Tfu_0574 similar to DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein
MTAPQRPERQQISEDHAFALLLRQGEGYERCYDAFAPALYRYCWTLLGAE
QEDAAAEAVYETFLAAVELLPRLSDPDLFRAWLFALARAACERHGFAAQP
AYAHLTVHSEQQPFVAALSALLPSQRELLELSLRHGLTHTQIAAVLGLDP
ETVSDLCRSAAQQAADLLTEQQPGGSPGSRWFIADIPLVVSSIALPGPPR
SLRARVIADCSDATAITRREQAAALLCPLGANGFPLPGARGAEAEAAEPV
QADAAVPAASASEADASPAAAEPETTDSAIAGEPHRLSGWLVPATAGLVT
ALVAFSLWGLGAFTNRPGNGTAAGTPPPVDGVSVAPMSDHVPASAAPDTG
KVPSIELTEPTLEPTPEEPVEPVAPDSVEDDTAEPAAPPAEPDPAPPASE
DAATVDPPAPAPQQPAPAPREEPASQPQPAPTAPAAPAPAPAPAQPAQED
PPPRRPGSGVISLLEGVLGLLGLHGNR
>Tfu_1205 Prokaryotic chromosome segregation and condensation protein ScpB
MSRTTSEVDLTVLRRNLEAVLMVVDQPVSAYELARAFGTDVETVTRVLRE
TAREYTEQGRGFDLREVAEGWRFYTRPECAEAVEHFLRDGHEVRLTQAAL
ETLAVVAYRQPVSRGKVSAIRGVNCDGVMRTLVLRGLIEEAGQDPESGAI
LYRTTSYFLERLGLRSLDELPDLAPFLPDDIEGLDDTGEQATR
>Tfu_0800 Protein of unknown function UPF0074
MRLSARVDYALRAAAELAAVGGGPVTAEQLARAQAIPGKFLENILTQLRR
AGLVRSQRGPVGGYWLARPASEISLADIIRAVDGPLANVRGERPEHLEYD
GAARSLQQVWIALRASERAILESVTLEHVATSQLPESVRSLAENPEAWTS
>Tfu_1511 regulatory protein, MerR
MSTRISSGAARTSSSASPEQQDASAPSSGTARSLLSIGELARRAQVSPRT
IRYYEELGILPTPQRTAGGSRRYPPEYLSYVQGALLLKELGFSLEEVREL
CQGTQERTGEASARTHAMLATKMAVLEQRIRLLSRLHDLIRAAAEGGGEA
NSGAAELLRLLGEEAQAAGSASSPTGQR
>Tfu_2053 arginine repressor
MTVDGAKSAPPTKAARHAKITELLTKYAVRSQNELARLLAEEGVQVTQAT
LSRDLDELGAVKLRTVDGNLVYVLPGEGGERLPRAHADELELEQVSNPRL
SRLAEDLLVSAEASANIVVVRTPPGAAQYLASAIDHSDIPAILGTIAGDD
TILVVARDPQGGEELAATLLRFANRRV
>Tfu_2916 similar to transcriptional regulator
MACSACRRAEPFPPTRCSTTNSKLTSMKTRLGDLERAVMDVLWEQTEPMT
VREVGRALADRDLAHTTVMTVLDRLAKKGVVRRHRDGRAWRYRPAASRET
YISELMLDALGQTGDRDAALAAFVRSMSGQEAEVLRRLLLENHGEHGESD
RSRM
>Tfu_3038 hypothetical protein
MSMLLPGCGLIPATMSSPAAKCFVRTDVAEGTRLAEDGFVLPSLQAAIEE
LGHRFSRATETLVARPLTLYEADLLEVPGEWVVQILRVSVSTDDVPIHAL
ETVCAASRHVFTIGQVAGSDQF
>Tfu_0056 Tyrosine protein kinase:WD-40 repeat:Serine/threonine protein kinase
MIEPLQPGDPGRIGPYRLVSRLGAGGMGQVFLARSPGGRPVVVKVILPEY
ANDDEYRIRFAREVEAARRVGGFHTAQVIDADPTADPPWMATAYIPGPSL
RKAVTERGPLYGNNLRTLAAGLVEGLAAIHACGLVHRDFKPSNIVLAADG
PRVIDFGVARPLDSSVMTQSGAVIGTLAYMSPEQTDGSQVGPASDVFSLG
TVLAFAATGRSPFMADSIGEIIARISGPPPELPELPDDLRELVYACWEQN
PDLRPTTAELLAQLSTDHTGDDWPPPHLSDLIGSMLPLGATTSPNPSLAI
EPPPPSHGPPRPSEPLPDPGDDADEPSAEKPSRTLPEPEPPELEEKPIQV
IHEPERPAPTPPRPREPARGAIKPKNPRPAAPQPPWSPPRVQPPRWKQLI
TKKPVAGILTAVATAGLVVSFLVWQWTLPETPLRPDSSTAPSESADPHEL
NEPRILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGH
TDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIA
FSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMV
ASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTV
HLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQ
EEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPIATE
>Tfu_2950 regulatory protein, LuxR:Response regulator receiver
MPQADTPKPIRVFLVDDHEVVRRGVASLLEDEDDLEVVGEASTAEQALSR
IPVVKPDVAILDVRLPDGSGVEVCREIRSSHPDIACLMLTSFADDDALFK
AVMAGAAGYVLKQIHGSDLVGAVRTVASGGSLLDPRSTGRMLERLRQNGG
KPDPLAALTPQERQILDLIGEGLTNRQIGERLFLAEKTVKNYVSSLLGKL
DLKRRTQAAVLVAQLRAKNQI
>Tfu_2152 peptidase S24, LexA repressor
MPEENRGGHQPYTEESSVSALHPVRTDDSVGSSAEQTGDAPTLTERQRSV
LNVIHRYVRERGYPPSIREIGEAVGLSSPSSVAHQLKVLQRKGYLHRDQN
RPRAVEIRIPHKTSGRTRRELGGLSGSEEIVDIPLLGRIAAGGPILAEEH
VEDVLSLPRQLVGEGTLFMLTVVGDSMIDAAIADGDLVVVRQQPDANNGD
IVAALLGDEATVKVFKRDREHVWLLPRNSAYDPINGDSATILGKVVTVLR
KV
>Tfu_1289 regulatory protein GntR, HTH
MLPNIMSGFGPSGVTWERRSEKVSEIVAREIVRDIAKRRPAPNSVLESES
AMIKRYQVARGSLREALRILEVHGLIRMKPGPGGGPVLSEVSSRDFGRMA
TLFFQVLDIRFCELVEARLMLEPFMARLAAERHDPKDHEELRAIVQQGFA
AKTTDAWLQATDAFHTKVLSMSGNGLLTLIACALKDIFTERASTIYVANE
GDHIRETHSEIAEAVIGGDAETAERLMREHLQEYADLVAEREPTLMNEVV
DWR
>Tfu_1423 putative transcriptional regulator
MDLTRLRLLVELRRLGTMTAVSEVTGMGTSAVSKHLAVLEREAGVRLLVP
DGRRVRLTPAGRRLAEHARDILERVEAARAEMAGEGPPVGRINLVTFVSM
TVPVILPAMEQLRQQHPGLEVRLIEHEPDQALDLLLSGEADLGLIYEYTL
VPRRIPEGLTVHPVGREPLFLAEPTASNPSGATMTRERLRALADASWIAN
SRGSDDDELVLRMCADAGFRPQIRHRIDTLEALSAVVAAGWGVGLLPKLA
ASPPHPGVVHTPLGELAGERRISLVARTGAWAWRPLHVVAHAIHRAARHV
LDPVASGFSEGAAADGSGAEDEPARGDSDPVRGFPHRGE
>Tfu_2956 cell envelope-related transcriptional attenuator
MGNLIGSAFGHPLSPLVSFVPRPRARDSAESHTPVEVSMSDDARPSTPSP
EDPPPRRRSLRRVLVWTSILLSAALIACLGTAYAYYRSLRANMVQHDLVA
LLPEEERPPKIGDAVNILFIGSDGREGGNAAYGGRDFVGERSDSLLLAHI
SPENRVIVVSFPRDSLVDLPACDPYGETEGTYGYYGMINAALFHGGPPCV
VKTIESLTQIRIDHFVHLSFVGFREMVDALGGVEMCIPVPLHDERSKLDI
EAGTQVLDGEQALAFVRARYEIGDGGDLGRIDRQQMFLGALASQMLDSKV
LANPTTMHALLESVTQYTATDADLTLDTMLSIAFTLADVEPRNITFYTVP
SWPAPWDPNRVIWNEEKAERLFRAIKEDTPVEDVIVETGRPTAEPSPSTS
LTPSYPAEPSPKPTNPEPTPSAAPPDAIEGRDATADPCVNGLGLGTEDMV
TPR
>Tfu_0592 Tyrosine protein kinase:Serine/threonine protein kinase
MAMAAGFPDGEELPEYIGPYKIRRRIGQGGMGVVYQAVDPQDRLVAVKVL
RAEVAGDDIARARLAREVMTMRRVRSRNVAEVIDADTTAPLPWVVTEYIP
GPTLDSTVTNHGPLRGRALTRVVTGLARALRDIHAAEIIHRDLKPGNVII
CNGEPIIIDFGIAYAVDGSKLTQTGTFVGTPSYLSPEVIEGSDLSPATDI
HAWGATVAFAATGNPPYGAGAFEVIFFRILNGEINLDGVPEPLRPIVQDA
VQRDPRKRPTAEELVARTEQLNLDLPWMEDEYRSSGMTGLHTVSADLPTS
TPQPAPPEPEENQATAVAEAAAPDRTMVAPEGFGDDEEEQDSGRRYDHYY
DATLRPEEFRDILTPVDYEGRNRDSADYDDEPPSLLERFRAYRRGEDRLS
DYFSDDEDDYYDEYEAKRLPWVMVVPVALGIVGLTLMMPTIGLILGTLAV
TVLGGLDLARREHARRLHERGPRSSDNVVIALSMPWALLRTLGHAALYGL
GYLLAGIVVGIAIGMVSGNSSANVVGSWALGVVVLMNFLFGPHARGAQRQ
SRWLVSKITIRNPYVYWGTIIAISLLALFLVVFGVQLVPAWDPIPGPSEW
FGS
>Tfu_0406 Tyrosine protein kinase:Serine/threonine protein kinase
MPSDGLPKNLEPLAAGDPATIGPYVLVGRLGSGGMGTVYLGRAPEKGTHV
AIKVIRPELAFDEATRARFRDEMENARKVASFCTAKVLDHGTFQNRPYMV
TEYIAGTALAEHIAEHGPLDSGTLHGFALGVAAALAAIHKAGLVHRDLKP
ANVLLSLSGPRVIDFGIARALNTSTSHTQTGIVMGSPGWMAPEQLLEEKV
TTKADIFAWGCLVAFAGNGRHPFGNGDAMTLGKRMLFAEPDIGNLDPPLD
RLVARALAKDPDQRPTAQELLLELAGGTDSNDTNDVVSHALHQSWRPNFP
PMPPGYPPPSPQAHSGMPGPQAQAQAPGQTTIAPQPYAHPQQGGPGPMPP
QAAGPQGGPQGGPQSPPMPQRPGPQASHHTGQIPVVPPTTGRQPPRSPAA
QGSSGGPQARPYVPPNTLPPHRPLRPDSSRSRLLIVFAVLGAVLLAVVLV
FGLVFFQDWFSSTSDTNPPGQGQEQQSSAPKEDPDDESDKSDTQAADPQA
GESLRFDLLDWYCGNQVLDRPLIVNGGEYCVAEIEAHNSANYPVKFRHDL
QILAHASGEQTKADAPLHGEGADPLWAGPIQPGDTVRGYLVFIVHSELTP
EVLILRSTVDSPGQQIEIPSGQPA
>Tfu_0731 helix-turn-helix motif
MGEENVSFGAELRRLRTEAGWSLADLAEAVHYSKSHLSKVETGRKSPSAD
LARACDTALGAEGRLAALVRGRRPTTRSGASGPPLPAAGPPLSPPHAFAL
GAGALLGLGPSGKEPPAFLGSADVLTAFRSMFDQARVLGQRTGPTLVLPT
VAAQAHALTRLARGAKPKLAVPALLLASRFAEYGGWLAQEAGNSHGALWW
TKHAVDLAAQAGDQEMRAQALIRRACVAMYAHDGLHTVALAQQAYAIAPS
PRLRAMASEREAQGHALTGDYDQCRRALDRAEKEAAHETAEPSDRPLLGS
STVPNRLAVVTGWCMYDLGRPAEAAEILDRELSAIPHTAVRARVRFGMRR
ALAHAAAGNLERACTLAHGLLEKFAAVDSATVAHDVRQLARTLSRWHNDP
AVRNLNPRLVLALRRAPV
>Tfu_2507 Tyrosine protein kinase:Serine/threonine protein kinase
MPGPESLQPNDPTTFGQYSVIGRLGRGGQGIVYLARDSEGQKYAIKVLNE
QWSQDTELRKRFEKEVRAAQKVASFCTAAIHEANLDADPPYVVSEYVEGP
DLQEAVSKEGPRKGAALQRLAVSTATALVAIHQAGIVHRDFKPGNVLLGP
DGPRVIDFGIARVTDSTATMTNSIVGTPSYMAPEQITGKNITDKVDVFAW
GCVMAFASTGNAPFGSDSVPAVVHRVVSAPPDISEVPEPLREIVADCLNK
DPDKRPTAKQLLMRLLGHNVEDETKVSTSQAVEEGEKRAISPTPFVSPYP
NQQVSESGPQTPFPPQPPPAPPTPPHTGPQSGYRYPQPGPPVPNPNSGGR
AHPNVTTHSSMPSLPPHPPITTPRPNYPTLPQTTSQQADDPVLSQGWVLP
AVIVTIIVLLLILLLMAVAES
>Tfu_3035 regulatory protein, LuxR:Response regulator receiver
MAETADPIRVFLVDDHDVVRRGITAFLESEGDIEVVGEAATAADAIARIP
AVRPDVAVLDVRLPDGSGVEVCREVRSRLPELACLMLTSYSDDEALYQAV
MAGASGYVLKQIHGSDLVGAVRTVAGGGSLLDPQSTARIMERLRERERRE
DPLAKLTEQERRIFELIGEGLTNREIGERVFLAEKTVKNYVSSILAKLDM
QRRTQAAAYAAQLKAEAARRHIE
>Tfu_1641 valine-pyruvate aminotransferase
MSVDPRESQPNPQGSRIDPYVDAYAARAAGMVASEVRALFAVASRPEVVS
LAGGMPNISALPLDALGELAQQVVVEQGRTALQYGSAQGDPVLRQQICEV
MALEEIDASPDDVIVTVGSQQALDLVTKVFVDPGDVVLTEGPTYVTAINT
FAAYQAHIEHIPMDDDGVIPEALEERLAALTRQGKRVKFFYTVPTFNNPA
GVTLAPERRHRVLEICERFNLLVVEDNPYGLLRYEGDPVRPLRAESERNV
IYLGSFSKTLSPGFRIGWALAPAAVRDKLILAVESAMLSHSNFNQAIVGR
YLATQPWPEQIKEFNEMYRARRDAMLSSLDALMPPECSWTRPSGGFFVWA
TLPEGINSKAMLPRAVNERVAYVPGTGFYYGGGGERNMRLSFCYPTPEQI
REGVRRLVSVLESEIELRDTFGGVPSSTGRGGEAPAPDLP
>Tfu_0554 regulatory protein GntR, HTH
MTGQRTVEDSPRVPKYYQVKKQLLQLIETMPAGNPVPPERTLATQFGTSR
TTVRQALSEMVVEGRLLRIQGKGTFVAKPKVTQVLQLTSYTQEMRSHGLQ
PDTRILDVGYINADEELAGLLAIRLGGRVLRIERLRLANGEPMAVETAHL
PARRFPGLRRRLDRHASLYEALATVYNVHLAEAEATIETVLATPKEAQLL
GVDVGLPLVLHCQHSFDDEGNPVEWVRSLYRGDRYKFVTRLRPPKERT
>Tfu_0505 putative membrane protein
MSHLEEQLSAFIDGELGHSERERVLSHLARCEPCRFEAAMLRQLKQRLCT
LRPPEPASEFLTRLLALPEATTGDPPAPPSGFGASPPLGAGQPLGGLPLP
RPERRPAPARGLFRFRGEWGRARYAVAGVSMLAAALGTAFLAGGDPAEPP
VVTPALTDYAIEHAAVSGQSPLGDPATVPVVTRPLSPHDAPTVQVVQTVN
RGVMRSDTPEHR
>Tfu_2037 conserved hypothetical protein
MKGMATLNECRSALDLVSARITQFDEAQRRAHIVERTISLTISDLDSVFD
MRLTPHGLVDITPRPSTAAGNRAQVRITISSDDLVALAEDRLDYAKALFT
GRVKVKASLSDMARLRKLL
>Tfu_0069 putative transcriptional regulator
MPALQRLSEKTRARREELLDGLRRLFLAEGFARFSVSDMAERLRCSKSTL
YLVAPSKEQIVVAAVRSYFKRAAERIEARVAEAPPEKRLVVYLEAVAAEL
EPVSEQFYADLAAFAPANEVYQENTLVAARRVQELVAEGVAAGVLRPVNA
AFVGAAVARVMTGIQDGTIKEATGLDDAEAYRHLADLVMASLTREATESP
LA
>Tfu_2737 transcriptional regulatory protein
MSHLLLLTNSNDPSDQILPALGLLLHSVRVAPAEASALLTPGPDNAAGSP
VDAILVDARTNLVAARNLCRLLNTTGLDCPLIAVLTEGGAAALTPEWQVT
DFLLTTAGPAEVEARLRLAIGRADSADDPDEIRRGDLVIDEATYSARLRG
RILDLTFKEFELLKFLAQHPGRVFTRAQLLQEVWGYDYFGGTRTIDVHVR
RLRAKLGPEYESLIGTVRNVGYRFVMDPAAKSNSDAAMPRMAEPERSLAP
HQL
>Tfu_0102 regulatory protein, MerR
MRIGELSRRSGVSVPTIKYYLREKMLPEGERIAANQVRYSEEHLRRLRLI
RSLIDVGGLPVPTVREVLAEIDASQPSVHHAVALAHRGLPVLTGERSDEP
REEARRYVESVFAARGWTVPEDHPGFTALVEALARMSLLNQRGFFECVGR
YAELAEAIAEVDIDLISGHTDVADVVEKAVLGTVLGDVVITALRRIAQEQ
VFNRRMAQGG
>Tfu_0567 possible regulator
MKIREFGELESAIMDALWKADRPLSVREIRETMTYRRNIAYTTVMTVANI
LVNKGILDREKVGRAWRYQPRESREEHTARIMSEVLHSGGDRGATMIRLI
EQFSDEEMTRLHEALSEMRIRRGIAS
>Tfu_2306 helix-turn-helix motif
MNVAQPEPGSGPTVRRMLLGSQLRRLREAKGISRADAAYKIRGSESKISR
IELGRVGFKTRDVEDLLTFYGVEDEAVRDSFLKLAREANEPGWWQQYGDS
LPSWFQSYVGMEEAATQLRVYETQFVPGLLQTEDYARAVVTRGGRKKLDD
AARHRIATRMRRQERIRKNHNVKLWVIIDEPAVRRPVGTPEVMRAQLEHL
YDLSMAPNITLQIVPFHQGVFAAETGSFTILRYPEYDLPDVVYVEQLTSC
LFQEKRADVEQYTMTLEWLAVVAERPDQTRKMLQKMIKELEE
>Tfu_3065 Tyrosine protein kinase:Serine/threonine protein kinase
MSETPERGLGSRAGVVLVDRYRLDERIGVGGMGEVWRATDILLSRPVAVK
LLHLAQVSDPVSQQRFRTEAQITAALSHPNIAQVYDYGEQDGFSFLVMEL
ITGESLSAIIKRNPGLDPDITLDVVDQAAQALSAAHANGVIHRDIKPGNL
LVTEDGTVKLTDFGIARGNESVTLTQTGMVMGTAQYISPEQVSGKPASPL
SDIYALGIVAYECLAGHPPFTADTPLALALAHSREPPPPLPDSVPPAVRE
LVECMLAKDPQERPSSAAEVSQWAQRLRAALNGGDATEALGLVSATAATA
VVPAQPGPPTGDSTPVDGPHSGAQAQTWPPPQGKDSDRVAERSAAPNSRL
NLPVVFALIATVGAVAVGIFLVGLLGKEPGTNGTPTSHRSVVPTLSRSPD
TTENITTDSQTPVPDNPGGQLPPLNDEPEESYSPAPHPEPTTPPQSEYPS
PPGDGADSTPDPGEEPGGPSDEDDADGGGAAPGGPTGGTGEESRGSTPP
>Tfu_3098 conserved hypothetical protein
MSARRARVLELAVLGLLYESPLHGYGLRKRLNSELGFFRAFSYGSLYPCL
KRMLRRGHISQHPEETGFGRTRIVYRLTEAGHQHLHGMLDEVTPAACDDE
SFGVYFALFGHARSDLRLRILHGRRDRLLTRLKELRSRLAHTADDYLREL
RRHGAESVEREIHWLDGLIAREQRLAALSPSQPGPLG
>Tfu_2809 regulatory protein, LuxR
MTIPPGPYSPNPAPLLARALRALRRDTGLPVAFGGPVSRDGRGFVIEQLD
RARTTSLLRLRVQAGAGLGGRALALARPWVVDDYFAAEEITHVYDHAVAP
EHLRSIAAAPVVVDGAPRAVLYGASRSSVDFGDRLLESVARVVQLVERDL
AVEEEVRRRLAAAPPALHSAEVHELVAELSQIAATVQDEGIRRRLVDVCR
RTRLLAGRVPSADRSPAPAVAAVRLSPREREVLAEVARGCTNDEVAEALG
LLPNTVKSYLKSAMRKLGATNRVQAVNLARAAGALD
>Tfu_0561 putative acetyltransferase
MIRPARPDDVPVITALVRELAEYEKEPQSATATEEDFAAALFGPNPAVFA
HVAEHTAEDGSPMVVGMALWFLNFSTWTGRHGIYLEDLYVRPEFRGRGYG
KALLTELARICVARGYRRLEWSVLDWNTPAIEFYKSLGAVPMDGWTVYRL
TGEALTALGQQ
>Tfu_2346 hypothetical protein
MPKISAPTIAAHRAQVLDRILDAVAVLTRDQGIDEISMTDVAAVSGITRT
ALYNYFPDKPALLLAFTERVTANFVQRCAEELPQDAPAIQRLAGFISFQL
EAIVEHQHPAAAELSASLGPQAYQQLADHVAPMQHLLVEILRQGTENGEF
EPVPLEHTAKLLLALIGSQRLPLVRGEIALDEARILVTEFALRALGVDRD
HAAAAARTRPTEQANDQ
>Tfu_2756 hypothetical protein
MSLYNEQIDVRSTTNDAPVLFSWRGTLYRVRRVIGTWHGTSSEAASEVRL
VRVAAESDHGHRGIADIVLDTATNHWTMRRLWY
>Tfu_1063 RNA polymerase, omega subunit
MAGTPPVAEGITNPPIDELLEVVDSKYSLVTMAAKRARQINAYYAQLGEG
LLEYVGPLVETQPQEKPLSIALREIREGLLTAETQEEA
>Tfu_1620 regulatory protein, LacI
MSRRRPTLAEVARQAGVSVSTVSKVVNGHLDVAAETRRHIEQLLEQHQYR
QRRSPGRQAVGLIDLVFHDLDNSWAMQILAGVEQAAHEHGVGVVVSAVRN
DNDRPGRRWLDNVRARGTDGVVLVLSELSPEQRSQLKALGVPVAVVDPVG
DLSHEVPAVGTTNWAGGLAATQHLIELGHTRIATISGPTHMLCSRARVDG
YRSALDAAGLTVPDEYIGYGDFTIPGGHAETHRLMELPEPPTAIFAGSDM
MARGAYEALFERGLRVPQDVSVVGFDDLPEAAWAAPPLTTVRQPLSEMGQ
MAARTLLRMVAGEKPHPRRVELATELVKRASTGPPPS
>Tfu_0601 serine/threonine protein kinase
MSEFIGKYRIITDFTTSGGGQCRWAFAVHGGKEYFIKEFLSPTYPLPDSP
GSKATKERKLRKCEQFEKHHREITKTLKRLSKPGGNLVITQDFFRHGAKY
YKVTEKIDTSALSLEEIAAEPMERRLLMLITVTHSLKILHQAGLVHGDIK
PENILIKGTVKNYHTAKLIDFDNAFFSGKPVPPDDMVGDLNYYSPETFGY
LNGTVMGEQLTTASDIFALGLVAVQFLTGSLVSFIPVEGAGRYPGELCAA
GASYTTGLEEIFPQADSFVRKMLSAEPSKRPTVDQVFDHVKELRSEVKKR
EDFITTTIVPRASSAKKSRLKGTLLKKSASTSREAEPTPRNEKRSRLRGT
LLEKRDSPPA
>Tfu_1033 glucokinase ROK
MRLTIGVDIGGTKVAAGVVDVDGRILTRVKHPTPADGDALADVVCDTVDE
LAGHYPAGAIGGVGVGIAGFVDENRSTVIFAPNLDLCKEPLRDRIRRRID
LPVIIENDANAAAWGEARFGAGRGVDHVVCVTLGTGIGGGIILNGQLFRG
RYGVGAEIGHYRVVPDGRLCGCGNRGCWEKYASGRALVAEARELARTDPR
RAKRLLDFADGDPERLQGHHITQAALEGDAAALECFTTLGTWVGQGLADL
AAILDPERFVIGGGVCEAGEILLGPIRDSFARNVTGRQVRTLADIRIAEL
GSAAGIVGAADLVRC
>Tfu_1756 Tyrosine protein kinase:Serine/threonine protein kinase
MGPLENGDPERIGRYRLIGRLGAGGMGQVYFGRSAAGRPVAVKRIHPHMA
ADQSFRERFAREVTAARRVSGAFTAPVIDADPDGEVPWLVTAYVPSLPLD
RAVREHGPLPEPSLRVLAAGLAEALTEIHRVGLIHRDLKPGNVLLAEDGP
RVIDFGIARATEGTAATQSIIGTPGFMSPEQVQGAPLTPKSDMFAYGAVL
VYAASGVGPFGEGAMPTMVMRVLQHEPDLSGVPESLRGLVAACLAKDERN
RPSPGDVLDALGDVPVGSSWLPPVFMRGIQDQVARMNAALSGAPATEGDA
TAVLGTQSGGYAATEVLGDHQATRAIATPPGADPHQPTSVLNTGTGPGGG
TPPTAVYGQNTGGQTPPTAVYGQNTGGQTPPTAVYGQNTGGQTPPTAVYG
QNTGGQTPPTAAMPPATPPTPPSRDAAYADLYRDSPAAERRRREQEELRR
RAEERERQRYEEQRRRAQEIERQRYEERRRYEEELARARRRAERARYAEQ
PSLWSFVKLLPLLIIPIIQIPLGWGASIAWEWFATTELYTGDGWYYPGLL
TIDGFFQALYLGYFLLNNVVSLEYLVRCLRSGSVTGVMLALAAAVGTNCA
LWYFGFFG
>Tfu_2582 regulatory protein, LuxR:Response regulator receiver
MRGWYSQVESHDVGEENTFASGRIPRIVIVDDHHLFRSGVRGELGDTVDV
VGEAGDVDEAVRVISEQRPDLVLLDVHLPGGGGIEVLRRILPKHPEIRFL
ALSVSDAAEDVIGVIRAGARGYVTKTISGTELADAIVRVADGDAVFSPRL
AGFVLDAFAATDAPPVDPELDRLTQREREVLRLIARGYAYKEVARELFIS
VKTVETHVSSVLRKLQLSNRHELSRWATARKLV
>Tfu_1087 regulatory protein, MarR
MEREGVSTMAAMDAVNWLTEEEQRLWRSFLTVNSLLQERLDRDLRRRNGL
TLVEYGILVHLFEAEGRRMRMRTLAETVLVSKSRLSHQVARLERDGYVRR
EDCVEDRRGFWAVLTDKGAEVLRAAAPGHVAQVREYLFGRLTDEQTAQLR
DILAVLERGLRDPTAH
>Tfu_0411 regulatory protein, MarR
MRDEVDGLVEAWRTERPDLDVAPLQVLSRVSRLARHLDRARRSVFAAHDL
EPWEFDVLAELRRSGHPYELSPGRLMRATLVTSGTMTNRIDRLTEDGLVR
RLPDPTDRRGVLVRLTDEGRERVDAALADLLRYEESLLAALTTAERDQLA
TLLRTVLAPLDEPD
>Tfu_3106 putative RNA polymerase sigma factor
MTDAVQEIPDNELLFRHNQGDEHAFSELVKRHHARLWAVAIRVLGDQEEA
ADALQDAFLSAFRSAHRFRGEAMVSTWLHRIVINACHDRLRRKMVRPAVP
TEDTALDLLSNERGRSAPDPTGRSDTSLDVHAALGYLPVEQRLALVLVDM
LGYRVEDAAKILDVAPGTVKSRCARGRARLLPYLAHLRNPSDSSNVPSPK
GGGRRS
>Tfu_2799 TetR/AcrR family transcriptional regulator
MGQRSDSDHVMAEATTDKRQGHTRGRTGNDRRTQIIKVATELFREKGYYA
TSLDDIADRIGFTKPAIYYYFKSKEDVLFAIVNSIVDEALERFHAIAAGP
GSPGERIHALLVEHTRTILRNLDANTVFYNERGLLSPEREREMRKREREY
TEIMQRLYAEGVATGELLDVDPTVATATLLGAAIWTYRWYDPEGRLSADE
VVEQITRLLLNGYRRPA
>Tfu_1378 helix-turn-helix motif
MPTLPSDLDLVTFGQRLRHLRRARNMTLAELGERVGRAPSQLSLLENGKR
EPKLSLLTALAKALDVSVEELLSRQPPSRRAQLEIALEEAQRDPLYQSLN
LPHLKVGKRVPNDVLEHIVTLYEELKRRAAKPTTTNEEARRANAELRRLM
SERDNYFPEIEKAARETLEAVGYQGGALSQGMILAIVAHHGFTLRYVPDL
PRSVRSVTDTRNRRIYLKRESLGMHTPRTILLQTLGHFVLGHTPPRDFAD
FLRQRVEANYFAAAVLIPEFTAVPFLTEAKRQRDLSVEDLRDVYAVSYEM
AAHRFTNLATRHLDLVCHFIRNDETGIIYKAYQNDGLIFPTDDTGAIEGQ
RLCRYWAGRQVFASPDRYSIYYQYTDKPNGTHWCVAHVDPSRERNFAITL
GVPYKESRWFRGRETTNRTKSECPVGECCVRPPSELASRWEGNVWPSARA
HSHVLAALPTGQFPGVDETDVYTFLEKYETA
>Tfu_2618 DNA-directed RNA polymerase, alpha subunit
MLIAQRPTLTEEPISEFRSKFILEPLEPGFGYTIGNSLRRTLLSSIPGAA
VTSIRIEGVEHEFTTVPGVKEDVTEIILNLKGLVVSSEHDEPVLMYLRKQ
GPGVVTAADIAPPAGVEVHNPEMHIATLNSKGKLEMEMTVERGRGYVSAA
QNKQPGQEIGRIPIDSIYSPVMRVTYKVEATRVEQRTDFDRLILDVWTKP
AIRPRDAVASAGKTLVELFGLARELNVDAEGIDMGPSPTDAALAADLALP
IEDLNLTVRSYNCLKREGIHTVGELVARTEQDLLDIRNFGAKSIEEVKQK
LSDMGLALKDAQGGFDPGSAAGSYGSDHDQSYVETEQY
>Tfu_2278 regulatory protein, LuxR:Response regulator receiver
MSPITVLTVDDNIVVRAGLVALLEASDDIQVVGEASDGAEAVTKAQELRP
DVVLLDVRMPVRDGVSVVEELAEFTKVVMLTHTEDPQVIQTSLRRGASGY
LVHGNFTLDELNRALREVVHGTGSPLSPVAATALVSSLRAAPPTPVPVAP
AALGLTEREAEVLEAAARGLSNAEIAKELFLSEKTVKNHINRIFRKLGVR
TRAAAIARWNGHAGPRP
>Tfu_2882 Bvg accessory factor
MLLTIDVGNSDTVFGLFEGEDLLEHWRVSSKGRRTADEWAVVVQNLLHFD
SLIHGDIDGIAMCCTVPMVQNEMRQMFRRHYGDVPAVIVEPGVKTGVPIR
MDNPKEVGSDRIVNALAAARLYGGPAVVVDFGTATTFDAVSARGEYVGGA
IAPGIDISVEALSKRGAQLHMVEIIKPRSVIAKNTTEALRSGIVYGFAGQ
VDGIVDRMAQELTDDVDDVTVVATGGLAPLVVDECETVDVHEPWLTLIGL
RMIFERNT
>Tfu_1373 regulatory proteins, AsnC/Lrp
MSVSWGLSGRSQPHFLPRSVVNSLSSCHDQAAGGGDARGDRGVVKEQRKA
LLIVLDAVDAALVRALQGDGRATYQALADQVGLSRTAVRARVKHLISTGA
IRIVGVLHAGVMGMEVFGHISLRVCGPVRPVVDELTRREAVVFVAQTAGR
FPVVAHVRVRDDAALSAELTHLRAIPGVVEAEVFRGDQITKDEYSSVRPL
RNISIDPLDWRLVRCLQANGRASYADLARTVGLSQAAARARVVRLLDAGV
IHVTALIEASAVGVTERLGFGLRCRGDASALADNLASLPGISFAATGFGS
YDIVGGVTATDRRTIVDTLETIRRAPEVSYTETWDYLAVAKERQRIDGHS
YTTIPHPRGG
>Tfu_1198 hypothetical protein
MSGYVARVWHDNPPNGTAEFDRLVASVAKRWAAVDPLLPEPSHPKLNTNP
LLTVSDELGRPMAIGAMRYSWYQPGEAGRTWGVPDQHWITPLVGGSDPEG
ALDSLLTSWRDQLERLPTGTGSESAALLTWPARDVCGIRPLQRHGMQPVT
VMAVRERRRGVPPALPPRDVTIRLADLQDLTAVVSLVMEEHRYEEHFGSV
FIQPETAEQTRKVAARALSRNPSWIWLAERRGRPVGLVWVSPPHRARWVA
PLVNAAPAAYIGYGTVVEEERGQGIGTTLISHAHHALDTHGIAVTLLNYS
VTNPLSGPFWHRMGYRPLWTTWEVRPALALR
>Tfu_1811 polyphosphate glucokinase/transcriptional regulator
MASRGRVGLGIDIGGSGIKGAPVDLDRGTFVVDRVKIATPQPATPEAVAA
VVAEIVTAFADDVPQDAPLGVTFPAVIQHGVARSAANVDRSWIGTNVEEL
LSAVTGRRVLVVNDADAAAMAEHRYGAASGVDGVVLLTTLGTGIGTAVLV
DGVLLPNTEFGHLEIDGYDAETRASASAKERENLSYKEWAEERLQRYYSV
IEDLLWPDLIVVGGGVSRKADKFLPHLRLRAPIVPAKLRNTAGIVGAAVL
AAERLGGDRVSA
>Tfu_2072 hypothetical protein
MIRRTVYFVAGIVVGGYVMYRFGRSARLWSPGGIADRVEKRIGSYREALR
EFNEDVAEAVRDYEEELLRRYAPDFQRQELPEASRY
>Tfu_2450 DEAD/DEAH box helicase, N-terminal
MMSRVASARWPGGFRSYQRHALEALDARWASGERRAWVVLPPGAGKTLVG
LEAARRLGHRTVVFVPNTAVQNQWLALWRKFDRPDGCTAGTRRSLDHDVT
VLTYQSLAVFDPDAETDEEGNELPPLGRLHGNGSALLEALRAAGPVTVIL
DECHHLLQMWGRLLADVLRELPNAHVLGLTGTPWETLTDSEAVLVRRMFG
APIRGASIPALVRDGYLAPFAELVWITEPTPAEQDYIAEQGLRFTELCTD
LFSPGFASTDFVTWLRRRFCERVTDTGEQASWAQLAAQEPELTDAALRLH
HAGLFMLPPGARLLERHRSAPTADDWMVLISDYVLNCLAPHQGKELVAPE
RAADDRDTQAWERIRTALRAIGYTLTRHGIRGGRSPVDRVLARSSAKSQS
TVQIIAAESAFLGSRLRALVLCDHERASVRPSPRLRDVLDDQAGSAWLQL
ELLATDERTSALHPMLVTNRTVAAAPDTADDFIAFVKERRPALNLTCVDT
GSRGSLVRIEGRWTSRTWARLVTEYFEEGRCQVLVGTLGLLGEGWDTPRV
NTIVDLTTATTPTSVVQGRGRALRLDPEWPEKTAHTWTVVCVSDTHPKGS
ADWERFVRKHEGYLGAAADGEVMSGVAHVDPALSPYAPPPVDQFADINER
MLRRAEDREDTRERWRIGSPYTDELLATVRVRPQQYRGVLAPRPAGQSPQ
PPPAVPGRAGVDTAEQLAVSPLWKIVLSVPVVAAAVLLVVTAFGLPPSAG
LAVAGAVAGGVCAYRLLARRPRIRRAAQLFEIASGEPDILRFGYAIADAM
HAAGYSPVGAEGLRLDIDTDGTFRLTFTGAGPAEAKAFSTALDEVISPLV
GQPRYIINRYRIEPPADAAQAQRMGMDWLLGKAPENPAVFHAVPALLGRD
RRGVEAFARAWNRWLSAGEPIYTASPAGSRLLHTYYATDPYPSETESRFT
WL
>Tfu_1506 similar to DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein
MRVQPFRRARGYQSVSTIAETADDADRWFIELYDQHRSAVFSAALRLCAR
WADAEDLAAETFVRAYRAAGSYGPERRSQMRPRAWLMTILWNVWRNRART
AARKPPPAPLTDDVDLADPRQDVAEIAEHHETSGALATLLNQLSTMQREA
IVLRYVADLSLSEVAAVLGIPEGTAKSHIFRGLAKLRALTRGGSYA
>Tfu_1084 serine/threonine protein kinase
MTVPQPSDPESPTRKIEAVEPTVQLTPSEPGVTRKLTALLRPGATRRLPA
AEPRTAVLTRPVRRRGRLGRLAWRVLEGPASEVEYRIPAELRERYTVQEY
VGAGGEAVVYRAVPVGRDGPPIALKLYRSGHDINRDLLDRISALGTVSPH
IPVLHGYGYARAPWGEEIAWEAQEYFALGSLRTLIDQAPLPDDQARAVIA
ALSDCLGYWQQSLNYNHTDVKPENLLIRSLDPPVFALTDFGGAVRATMSQ
IYGGQAITEAYAAPEVIEGRREAPAAWWSLGVIAHELVTGQRPPRSGNWL
TARSTAVDLSAVADERWRLLIRGLLTPDPKTRWGDAQVRQWLRGERPSVA
RPRKHRPITFEGVAHEDPPSLAFDLMDRFDKGAVWLQRRHQEVETWLSRE
VHDLTFDPAPLKQLRTRPERAHVAISALAAQYVPGLPPRYRGHQITAEGV
LELARGESTQQAVLREAIEWGAVQSAARHWCTHPRCRSHETRRCQLLELV
HHEVPLIMRQVRATVDGLAQTPDFTPPEEHDWDAAWARAAELVLDPEAAA
RYRRLLLTRSWLPGRYGDAARARWWTEQRTTALRGDRTARSTRAALVTAV
LLLPSAVQAGAAQRARAATESRERRQQRWERFTSSVESRWSATRARLARQ
WEKRRTGPFEWHTPEAREERRRRREARRMERGMARLQRAMAAGRCRRFAR
PAALAGLLDGCGLWLWESQGGLFTDQEWVVTAFGWAEAIRDNSLVTLAAQ
LCSSLLELLPGGIGLVWWFPVLLGVLLFALGRTAANQHRSARTRLVAYRL
AVVASVLVVVRALAHGLFFLFMGVLIPAALLAG
>Tfu_0684 regulatory proteins, AsnC/Lrp
MTGGSESTPTQRRNSGGVVLDDTAKRIIEQLQQDGRRSYAAIGKAVGLSE
AAVRQRVQRLLENGVVQVVGVTDPMMLGFKRQAMIGIRCNGDLNEAADAI
ADIDGVEYVVITAGSLDILAEVVAADDEQLLNILTRIRSVPTVISTEIFL
YLKLRKQTYAWGTR
>Tfu_2375 Tyrosine protein kinase:Serine/threonine protein kinase
MPPQPDAAPPPLPPELAPLLPTDPVTIGPFRVIGRLGSGGMGAVYGALDA
EHRCVAVKVIHAEHVRRPEYRELFAREAELVSRIDAECTPRFLGADPNAP
EPWLATEFVPGRTLQQHVREFGPLDEAALRAFAAGTAEALAAIHAAGVVH
LDVKPGNIMLAPDGPKVLDFGIARAIGDTTDKNVYGTPGWAAPERLDRQP
GTPAADMFAWGGLIVFAATGRSPFGTGTSAELLERVRAGDCDLTGVPEEL
MELVARALSTDPEARPTAVEAFHTVLALDTVAADAIEEPGEDAAAIHRKR
LRALLHRVWTGFDAAGHRPELWMALGTAAGGVGVAAGGAAALATQGTAGG
GAAAGSGKLVGTASAAGGGASWGAGAGTLTKSATVTAAGTGLSGKAMLTV
AAGATAAAVAGGWLVGRAVTDQPLLPFTDPEPSATAALAPSPEEDEKEGQ
EVRFRNLTLWFPEDWTVHVIEDIEFVGFGPDHEGREIVDDWIAAHPPGNP
GCAEVDWNHWEWPAALVECPHIRILGPGGITYGGAVYEPITEEPDAGLFA
PSQNPLPCIPGIDAYEADPASFPGQSPLVEELAPVGDRSALYREYLTPCG
NPDGRDPELLYYTQRSWFLPESQILIVDEYGIEDIDAILADGEFASRSEE
D
>Tfu_2796 Protein phosphatase 2C-like
MRTAGAGGAVEQGRPLSAGPRRSSTLGTVVFWASLGISLVLTLSFVVGAL
APLVPFLVFLPAIVATVGTLQQTAIIAGWTYLVAFMVYASRDGISGQELY
GLVLAAVLAVLSIAASWYRIRSAEEEYRRRSHEEEVRQLRSTVAELQRRI
LRPLPARVSGLIVDGHYRPVEENQMVGGDIYEVVRTPFGVRVMIADVQGK
GLPAVGTAFSVLGAFRSAAYHIKDLIQLADVLDTSVVRYNIYAKQVQEPE
RFVTALLLDIDDQGRVRVINCGHLPPYVVCPQYAGPAVPHDPSAPLGLGS
LVPQARVIQEFSLPPEATLLLCTDGVTEARNRDGKFYPLKERLRGWRNVP
AEQLIERIAADLGEFTEEDYRDDMTVLTLYRERSAAPVAEPPRQAAR
>Tfu_3110 ParB-like partition protein
MLGGAARPGAPGAAHEPRTIDGAYLEEIPVDAVMPNPRQPRQYFDEEALE
ELTASIAEVGLLQPIVVRKLDGSQSDSTAKYQLIMGERRWRASQRAGLEK
IPAIVRETSDDDMLRDALLENLHRQELNPLEEAAAYQQLLDDFGVTHEEL
AKRLGRSRPHISNTLRLLNLSPAVQRKVAARVISAGHARALLAVEDPELQ
DHLAHRIITEGLSVRALEEIIALGEIKAPTKQRRATVRQPSPELEEVANR
LSDVFDTRVKVNMGRNKGKIVVEFATKEDLERILATMAPGLLAEK
>Tfu_3022 putative RNA polymerase sigma factor
MDRATQATHDEFAEYVRRRGPALRRMAQSLVGNHADAEDLLQNALLKTFF
AWDRITSPNARDQYVRRAMVNTQISEWRRRRLDVYPTDEIPEQRVDDPSW
RTDLTDTVSRAINRLPHRQRLAVILRYYEDMSEAEIASVLGISVGTVKST
VSRAVAKLRHDADLVREQPSRPRSG
>Tfu_0938 regulatory protein, LacI
MERRRRPTLEMVAALAGVGRGTVSRVINGSDQVSPATREAVKRAIKELGY
VPNRAARTLVTRRTDTVALVVSENNQKLFAEPFYAGIVLGVGVALSERGF
QFVLATGRSGIEHERLGGYLAGQHVDGVLLLSLHRDDPLPQMLDEAGVPY
VYGGRPLGVPEEQVSYVDIDNIGGGRQATQRLIETGHRRIATIAGPQDMV
AGVERLQGYREALLAAGMEYDETLVSYGDFTYDSGVAAMRELLDRAPDVD
AVFAASDLMGLAALRVLRASGRRVPEDVAVVGYDDSTVAEHAEPPMTSVN
QPTELMGREMARLLVDRITGETTEPVRLVLETHLMVRESG
>Tfu_0288 regulatory protein, LuxR:Response regulator receiver
MIRVVLADDERLVRGAIATLLNLEDDVEVVAEVGRGDEVVATVVKHRADI
AVLDVEMPGMTGLEAAAALHQEVPSCGILILTSFGRPGYLRRALAAGARG
FLAKDAPVDQLAGAIRTVYRGGRFIDSELAADAMMAGENPLTAREIDVLR
AASTGASVAAIARTLHLSEGTVRNYLSSAISKLGEANRIAAIRKANAMGW
L
>Tfu_0834 regulatory protein, LacI
MGPPRLADIARHAGVSEATVSRVLNDKPGVGPATREAVLTALDVLGYERP
ARLRQRSAGLVGMVVPELENPIFPMFAQAAERVLAQHGYTPVLCTQTPGG
IVEDEYVEMLLERNVSGIIFVSGLHADTTANHDRYRALLQRRLPIVLVNG
YVEGLPATFISPDDRAAARLAVNHLAALGHTRIGFASGPHRYVPVQRKLD
GFKAAMLENGLDFHDDLVELSLFGVEGGHAAASRLLDRGVTAIVCGSDLM
ALGAIRAARQRNLTVPGDLSVVGYDDSPLIAFTDPPLTTVRQPIQAMALA
AVRALCDEISGHAPARTEYMFEPELVVRGSTGVHRASLGEQVAPAGN
>Tfu_1407 RNA polymerase sigma factor
MSRTAQAASPVTAEIEAASATLDELIARGRARGHVSLSELRTAFSEAGIT
PAEGRSLLRELSDTGVRIANNEDTPVDPGDDDTLEAVLETTSKGSGRRRS
AKKRSRKKQPAQAGAETTDAPEADLDDHSPALGDSVHTYLKAIGRRELLT
AEQEVELAKRIEAGLYAEYKLGWLEESPGPQEMSETEREELEWIAEDGRR
AKAHMLEANLRLVVSVAKKYSDRGMPLLDVVQEGNLGLIRAVEKFDYAKG
YKFSTYAMWWIRQAIQRGFADSARTIRLPVHVLELLSKLSRLERDMHQTL
GREPTPDELAQELGKTPAQIEELLRITRQPISLDSTIGEDGETRIGDLIE
DVDASEASEVVDRQLMADQLRRALDDLEPREATIMSLRFGLFDGRPRTLD
EIGKHLGLTRERIRQLEKQSLSKLRHPSRARQLLDFAS
>Tfu_0179 RNA polymerase sigma-70 factor, ECF subfamily
MATIELDRPAETTVTAEGLDFAEAVRPYADQLYPAALRMTRNSADAEDLV
QETFTKAFANFHQFRAGTNLRAWLYRILTNTFINGYRKKQREPRQEVTDE
IKDWQLAAADAHSSTGSRSAEAEVLDRLPDSAIRTALAQLPEEFRMVIYL
IDVEGFSYKEVAEQMDTPLGTVMSRLHRARRQLRVLLADYAKERGLYAD
>Tfu_2959 regulatory protein, LuxR:Response regulator receiver
MSNPDRAVSPSVLIVDDHELFSASVEMTLCNRGIHAVRAHSLEPSAVLDQ
ATQLQPSLILLDLDLGRDAEGRPRDGVPLARDLTRSGWQVLLVTGSTERE
RIAEALAAGAAAWLSKSVPFDELIYTILDGFAGRPMMDAKERQELIAEYR
ALQAQQRATNQKLAQLTKRERQVLDALVAGKRAKVIAEESYVSIATVRSQ
IRSILAKLNVRSQLEAVALVKSLNR
>Tfu_0706 helix-turn-helix motif
MTVRRPTVAGRDLGSELREIREERGLSMREVARRLDWPASKLSKIETGKQ
GTKREDVASLLAIYGITGQRRDYLVNKAGKVDKPGHWEKSGLDGGLSRKP
EPSYVWNETQSRSRASSRCSYQACSSSPSTPAPL
>Tfu_1384 regulatory protein, MerR
MTDYYTPGEVARRHGLSLDTLRYYEREGLLAQVERSPAGHRRYRASDVEM
LDLVRCLRDTDMPIARLREFAELVRAGDHTIPQRIEVLVEHDAQLTARIA
ELRRRQEAIRHKIDYYRGVLAENRSDTEEEGR
>Tfu_1568 regulatory protein, ArsR
MFSLFLVIRFRRYYRLMAMVNGRSGDSPADSDLRAAQALFHSLSDVTRLA
IVRRLAQGEARVADLVAQLGLAQSTVSKHVACLRDCGLVKGRPEGRQVFY
SLAHRELFDLLAAAEVVLAATGNAVALCPNYGGEDAVAEACGE
>Tfu_1813 helix-turn-helix motif
MSQREGVGTLPGDFWTRPAVAAALATCDMAALVEAVRLARGWSQTDLART
VGYSQSWVSRVVNGQQSLTLDQVREVCERLGIPIHLLRFAPAQPSSVPLT
ASRPPAAFAAGRMKGAGPTRRRDFTKAVALATLSLPNLSAVGNVHEETAA
TLRAITGSQRRLDASSPSRDLVNAALAHWELSARTLSRAKRTPFAAEVAA
ASSEAAGFAAWLHADMGDSGSARSFYHRAVKHAHQAGDVLLTVYMLGSLA
LFEIDSEEPELGLRLAEEAAHKLRGEVHPTAQAWLSCVCALGHAALGNRA
ATQERLAHAEHAAERPENTDPPWPWVFRFDSAKVAGYRALAAVRLRRPHE
ARAAFFEAFPRTVSAPKQQSILMVELATAHADAGDVDEAFRLASHALQTG
VAYRSEKVLNRVRRFRREYRGPQARCVHAFDEQLASLTTGRLPL
>Tfu_1988 putative DNA-binding protein
MGGAERTEGSARTGAALTPVGHELGSETGTRARVARLILEHGPITASALG
ERLGLTPAAIRRHLDNLVSEGMVEARDAHPVRRRRRGRPARVFVITGAGR
DAFVHGYDDLAASALRFLAEKAGPQAVAEFAQRQVAELERRYRPLLADAP
PHQRVRLLAEALSNDGYAASAGAAPAGGEQLCQHHCPVAHVAAEFPELCD
AEVEAFARLLGTPVRRLATIAHGDSVCTTHVSPRDIGSLSAEARSQRGTG
TPRQTGRPVQEDPRK
>Tfu_1667 regulatory protein, MerR
MGRDRMQIGEVAERTGLSLRTIRYYGEVGLVVPSARSKGGFRLYTESDVA
RLLLIKQMKPLGFSLEQTRDLLGVLDRLDSPGLDDAERAALTDQLDRFET
AVAARCAALREQLALAEEFGARLRARRGAAVPRARA
>Tfu_0949 putative TetR-family transcriptional regulator
MRTRGGDRRAAILRAAAELFAARGFRSVSIEDLGRAVGTTGPALYRHFPG
KEALLAEVLLDISERLLRQGTEHVAAHPDPNDALDALLRGHIAFALAEPA
LITVHDRELLHVPEEPRRKIRRLQRAYLEQWVDVLAAVRPTTPTPVLRTA
VHATFGLLNSTPHSAGELDRDHLAELLFTMARTALLAAGK
>Tfu_0482 regulatory protein GntR, HTH
MVTQAMDMEDLGPLSREYGPDSEIDPVCIDPVWKQIAAILLSRIRAGWYQ
PGKPIPSVKQLHQEFGIAKGTAERAVNWLKEQGLVRSVVGRGVFVLPEHM
RPKNE
>Tfu_1941 response regulator receiver
MRVLVVEDEQVLADAIAVGLRRESMAVDVAYDGDSALERANVNDYDVIIL
DRDLPGTHGDEVCKSLATARYPGRILMLTAAGELDDKVAGLSLGADDYMA
KPFAFAELVARVRALARRSVPPLPPVLRRQGITLDPANHTVERDGRPVSL
TPKEFAVLEVLMRANGAVVSAEKLLEKAWDENADPFTNVVRVTVMTLRKK
LGDPPVIHTVQGAGYRI
>Tfu_1957 conserved hypothetical protein
MDPVSLVVGAMIALGGVLVGRLLPNRRSSVPPAQASLTQGPRTPQPICGC
GHHLVFHDQKDKTCQAQVVIPGRWTGERTHTYRKCMCQGYRGPMPVDEYY
VPDIIDGE
>Tfu_1372 cell envelope-related transcriptional attenuator
MGRRRRSTPAPGRPMSMTQALLWTAASAVLPGIAHVRMGRRWAGAVILTC
YLLFIAALVGGGLVVSGNLVLSATLATQNHWLLLMGVTAFVVAVLWMTVV
VHSYVITRPESRTFGRRLVAGAVVTVLCVAVASPAAAVGYVSYTAYDVST
TLFESAGSEPHDDADPWNGQDRVNVLLLGGDAGKNRYGMRTDTMIVASID
VETGDVVLIGLPRNLENVPFPEGTALAERYPAPYGFDNLLNEVYQTVVDE
PALAINPYATDPGADTLKKVIGFAISLDIDYYALVDMQGFEDIIDAIGGI
RVYLEEPLPYGQRGEYIDAGWQLLDGRKALWYGRTRVNSDDYSRMGRQGC
LIKYVAEQADPATILTSFRSLASAAKSTLRTDIPQPKLPHFVELAEKVAK
ADMETLQLSPPQVNTAYPDWEHIRALVHHAVYDTPLPAASGEDAAPDVGL
SPESSAADTGETPAEQPEPTPHSPGRQVGEEATALDELCP
>Tfu_2907 putative CarD-like transcriptional regulator
MTFKVGDTVVYPHHGAARIEAIETRTIKGEEKTYLVLKVDKGDLTVRVPA
DNAEEVGVRDVVGQEGLDRVFEVLRAPHTEEPTNWSRRYKANLEKLASGD
VNKVAEVVRDLWRRDKERGLSAGEKRMLAKARQILVSELALAEKTNEDKA
EALLDEVLAG
>Tfu_1771 similar to transcriptional regulator
MSQSKTERQLNLVICLLATRRFLSAQEIRATVHGYGDVESDTAFKRMFER
DKKELRDAGIPIITGRHDPLSDEDGYRIARDDYELPPIDLRPDEAAVLGL
AARAWRHAVLGEAAANALLKLRSVGVPVDAAALPAVTSVLGADEPAFPSV
WQAVRDRRPISFDYRKPGEDTPQRRELEPWGVANVAGHWYVAGYDRDRRA
RRVFRLSRIVGDVQIHTSAPPVQVPKDVDVRSLINARPPEPEQVAVLEAR
TDAAHALRRAARRIVAGERTGGTGWDVVEYPYVDEADLAARVAEYGEHVV
VREPEQARKAVVAHLRAVVAAPVAAATDEDPPAPLPGTPRPPASRRAGTS
TEQLRRLLMLVPYALSHDVRVSEVAAHFGLTEKQVLKDLSLLWMCGLPGY
TPGDLIDVDVEAAAETGEIIISNADTLAAPLRLTADEAASLVVGLRLLRD
LPGVDSVALARVEQKLRDVAGAAGQLADAVDVRVDDNPEVAELRHRIGKA
LESGSRVHLRYLSGYADRVSEREVDPMRLVVQDGHYFLEGWCRLRRDVRL
FRLDRILELDVLPVAAEVPAGVRSRDLSSGVLQRSADDAFVTFELEPAAR
WVTEEYVCSEVQELPGGRVRATLRTPEPGWAVRLALRLGATGRLVAPGEL
AARVRELAERALQRYAEERPDVPQR
>Tfu_0465 hypothetical protein
MEKVEKPVRASARGAATRSALLEAASYVFRTSGFDKAGVSEVVAQAGASV
GSLYHHFTGKADLYLALYQEFQQRQQERTHQAVVDARAEGENDPRKLMTI
AARAYLEGCIEERELTRIFYSGDSPPGFEALMRQQLREWTGRNAALFRKA
DEPVDEALLMIVTGSISLAATEVIERDPDEARKLADAVVERLSSLTPRKE
>Tfu_1787 regulatory protein GntR, HTH
MGSESLADRLADRLLDQVVRGELAVDEALPSEAEIAAAADVSRLTVREAV
KVLRTKNIVRVKRGRGTYVNAPEHWTDLELILRMAQRRSGAGAAALGLLE
VRRILEAGAAELCAQRRSDADLALLTTHVAEMDKAIAADDASTFARAETA
FHETIVRSCGNVFIPAICAPVDRLLLHLHARTATIAHIRVRAQSHHRRIL
SGIAAGSPAAARDAMRAHFDQLAEDLLRHVVDRCGVSEP
>Tfu_1365 putative acetyltransferase
MLVRTVYPEEMPHVGELRVRTYLDQGLLDPDSPYLPVLRALGTSGIGDVL
VAVDGDELLGTVTLRPFQEDSEITLSPDEAEVRALAVAPHAQRRGIGRLL
LRSVIERARNAGVAHLVLSTQPIMVAAQRLYASEGFVRLPERDWSPQPGV
PLLAYGLRLSARGQE
>Tfu_2167 helicase c2:DEAD/DEAH box helicase, N-terminal
MRTPAGDRPGSPVDNRPNLPHRPGTVRGVSDLPDVDELLDAAVRALNGTR
RDGQATMARSVAAAIDSREHLVVQAGTGTGKSLGYLVPALRHAVAANATV
VVSTATIALQNQLIGRDLPRLTEALEPLLGRRPVYAILKGRRNYLCRYRL
SQAATGPEEAELFDPHLLSSLGRQVRRLHEWAEETLTGDRDDLTPGVSDL
AWRQVSVGANECIGPQMCPVSDDCFAELARAETIGADLVVTNHALLAIDA
VQGYRLLPDHDLLIVDEAHELVDRVTSVATGVLSDRSISLAAKRAAPVCD
VELTERLAETADGLALMLADTPPGRLDHLPDPLATAVAAVRDAAHACLSA
LPEPPRDDPHAASARRLALAGLEEVHCTAERILLCVQQPLRDRQDVVWFA
RGARQTPGLRIAPLAVNRTLRQALFTERTTVLTSATLALGGSFDLMARQW
GLGPLPDHDPAEAAEPAETTATPSAEPSPLRWRAIDVGSPFNHARSGILY
IATHLPPPGRESLHPEYLDEMAELIDAAGGRTLGLFSSTRAAVHAAEELR
ERLPYPILCQGDDSTGHLVQQFAADEATCLFGTLSLWQGVDVPGPALQLV
IVDRIPFPRPDDPLASARQRAIGAQGGNGFLEVAATHAALLLAQGTGRLL
RSVHDKGVVAVLDPRLATARYGAFLRASLPPYWGTTDPQVARAALRRLHE
AASRAA
>Tfu_0017 cell envelope-related transcriptional attenuator
MAYPAEGGRRPRFWATARAALWTSASALLPGLAHLRAGKRAAGAGILGGF
LLLATAAGAAFYQLRSDLSWQAWLAAQPYWVEAVAIGAVALATLWSSIII
RSWQLTRPRPERWGSRAVGAVLVTVLCTALIVPFAFVVRTAVTLHSTLTS
VLAPAEPASQAAADTPWPHRSHINVLLLGGDAGDNRYGLRTDTMIVANID
IDSGDTVLISVPRNLENVPFPEGTALAERYPEPYGFDDLLNEVYQTVAEE
PEELAINPDAPDPAADTLKHVIGHALGISIDYYALVDLRGFADLIDAIGG
VVVPVEEPIRYGRRGEGLLEPGERRMSGKEALWYSRSRTDSDDYARMGRQ
GCLLKYVAEQTNPVTVLRRFDELADATQRTLTSDIPPSHLPALVDLARRV
SQARMHTLQLSPPQVTTAHPDWTEIRTLVDRAIRSNGEDHGPADTAKQPS
PSPDSPGRQIGKKPVSLDRLCP
>Tfu_2755 putative TetR-family transcriptional regulator
MTQSAESTTVSPSVPDRLLAEATRLFAQRGFDRVSVQELVEAAGVTKGAM
YHYFTSKDDLLFAIYQRVLQLQMSRLAQIVERGGDVTERLHAAAADVVKT
TVDNLDDMVIFFRSLHMLSPDRQREVRKERRAYHELFRSLVEEGMREGVF
QDKIPADIVVNYFFGSIHHLSMWYRADGELDGAQLGEYYADLLLASLRAD
>Tfu_1906 helix-turn-helix motif
MASCADLYRLLGDQSAMTDYQMACTSLGARLREIRVAAGLSGRALAQALG
WHPSKVSKLELGRQTASVEDLKAWAGACGAPGSIAELLAMRRTLETHYAN
WRRQLAGNPSQTSGFRRSGEAYTPAPGC
>Tfu_0455 sigma subunit sigma24-like protein
MQNLVTTGQQFGKMCQPFCGGMRVIAGRDYRQWGVSVVTKADQSSETVSP
NHAPGEEESLEQLALRAKEGDEAALEELLRRIQPDVLRRCARFLPYRQDA
EEACQDALMRVAANIQNFRGDSMFTTWLYTVVSNSARQTYRALKRRAAEM
PTEADRLPHRTDPRTTSVIAGSRIDLLEALDQLEKDRPNLVAPLVLRDLC
QMEYGEIAAQLDLALGTVKSRIHEGRKRVRQALAVN
>Tfu_2597 putative RNA polymerase ECF-subfamily sigma factor
MGIIRYVRDLRVAEGTPPSHRQATRPRADDAELNHLTSLAAQGDDGAVDS
LIREVHPMVVRYCRARLSRVPGSTHDFDDVAQEVCLALLSALPRYRDMGR
PFASFVFGIAAHKVADALRGRTRADVPTDSVPDHPDESPGPEESAVRIVE
AEQARELLSTLPEQQRRLLSLRVIAGLSADETGHALGMSPGAVRVAQHRA
LARLRRAAHRLR
>Tfu_2421 transcription termination factor Rho
MSDTTELHQDAAVGTQDTTSSKVDVGDAAPPAGKSASTRSRSRSGGTGLA
ALKLTELQRLASDLGITGTGRMRKSEIIAAIEAKQGGPVSAPETTTAKTA
ETASTTAAKKKESAATTEDPATEPAAEKADKTTEKTATESAEKPERTRRR
SRRRSGEETAETPAAESSDTTESAKEDATASAPAETEKTTTAQPAQNGQN
GTRERRRRSRNRDGGSDQQASQQQNGTKSDSDDEEYSGGSRRRGRRRDRR
DRRNRERADQEPVISEDDVLLPVAGILDILDNYAFVRTTGYLPGPNDVYV
SLAQVRKYGLRKGDAITGAVRQPREGERREKFNALVRLDSVNGMPPERAR
NRPEFSKLVPLYPQERLRLETEPHILTTRIIDLISPIGKGQRGLIVSPPK
AGKTTVLQAIANAITQNNPECHLMVVLVDERPEEVTDMQRTVKGEVIHST
FDRPAEDHTTVAELAIERAKRLVEMGLDVVVLLDSITRLGRAYNLSAPAS
GRILSGGVDSTALYPPKRFFGAARNIENGGSLTILATALVETGSRMDEVI
FEEFKGTGNMELKLSRSLADKRLFPAVDIEASSTRKEEILLSPEELNIIW
KLRRVLHALDTQQALELVLSKLKKTKSNAEFLLQVQKTTIGPND
>Tfu_1383 putative transcriptional regulatory protein
MNPDPLPPVTARGGRASRGRDPRRRRAILDAADAVIQREGPDAPMAAIAA
EAGISKPILYRHFGDKSGLYRALAERHVDPLMERVREKLREPAELRPRVR
ATVGTYLQMISENLNLYRFLMHRATAEDPRTRGDVSLMVRRFGKEFADTL
VAEQYISDPVRAVIVAHAVIGMVQATGEWWLDHPEIPYEDVIESLTDAVV
GAVTSECAAPAS
>Tfu_0514 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
MEASTLTTVRSTHSSDQTTFRDLGVIDDIADALEAEGIVAPFPIQSMALP
LALTGADIIGQARTGTGKTFAFGLPLLQRVHTQPGSAKRPRALVVVPTRE
LAIQVAADLATASKRIDVRIATVYGGRAYEPQISALRKGVDIVVGTPGRL
LDLVKQRHLILSEVTALVLDEADKMLDLGFLPDIERILAKTPDQRQTMLF
SATMPSEIVALSRKYLRRPTHIRAEDDPLDTGSGQVTQHVFRTHPLDKLE
MLARLLQARNRGLTMVFCQTKRECHHVSTELCRRGFAAAAVHGDLGQGQR
ERALRAFRNGKVDVLVATDVAARGIDVDDVTHVVNYECPDDEKTYTHRIG
RTGRAGRSGTAVTFIDWQELLRWKLINRALGLPFADPPETYSTSPHFFDA
LDIPRDAKGVLAKEEQDRAGLAAEEVEDIGETGRASRTKDRERSRQRRSR
PRKRTRRGVPTTRSAAEPTGETAAKSDADSSARTRRRTRRRSRRNAGTNS
DRA
>Tfu_1997 putative transcriptional regulator
MARPRTPLLSRTRIQEAALALVDRDGLQGLSMRKLAQELNVQAPSLYSYY
RTKEELLNDVVDRITANIDVSGFKDGDWKRGLIVWARSYRDALAAHPNMV
AFIASGPGRREEALRRADAIHGGLVSAGWPARLATMIGASTRYLVVGAAI
NSFARGFDADARVYQDRYPNLSQAHRLPELAAEIDNDSFELALRAFIAGL
EVLYPDKAGAARRPEAAAASAGQHAKAGSRASAGAADPSRAPLEDHTPER
>Tfu_1277 regulatory protein GntR, HTH
MAHPPLRPQKTAMLVAQQIVADIHRRGNRVGDRLPPERVMLDEYSVGRGT
LRESLRFLELQGVISLRPGPGGGPIVQQPDASSLTTTLTLLMQFEKAPFR
TITEARTALEPMMARLASERMSDEKLKELKESVDMMRDNLEDQEVFLEQN
RRFHDLIAHGSGNVMFGYLVDSLLGILDGSAIGIDYPQFRRAAVHKAHLN
IYEAIASRDPEASAEAMAQHIHEYVRYAEKKFPEVLDAPIVWSS
>Tfu_1923 putative transcriptional repressor protein
MTTDAQVTPGSQAALRQANRERVIAALRRGGTLTQAEIARATGLSAASVS
NIVRDLRAMGVVSVRETSSNGRRARAVTLQRPPGVLVAIDFTHSRLTVAL
GNTDGRVLQEESIAYDVSEDPVRGVRRAVWLTETLLTQARVDRSMVLGVA
AAIPGPVDPATGLIGDITSMPHWAGFNPGAELQERLGLPVSVDNDANLCA
LAELTEGAARGLEHVVYVKVAHGVGAGVILGGRLFRGMNGNAGEIGHIGL
DERGQVCRCGNRGCLETLVGTPYLLDMLPQQGRVKHGASLVDLLEAAQEG
DPGCRRIIAEAGAALGRGVAVVVNMVNPQMVIVGGEIAEAGELLLDPMRR
AMELGALGNALTGLRLVTGELGERAALRGALQVVLDSTF
>Tfu_0199 regulatory protein, MerR
MNDATFGEDTPVYVISVAAELSGLHPQTLRQYDRLGLVRPGRTPGRGRRY
SMRDIQMLREVQRLSQEEGINLAGIKRILELQREVAELREHIFHLHNELN
AARSAVAARRASSDHSSSSRSGGELLPVHRTRITIFNRTTTQPPESQ
>Tfu_1823 putative membrane protein
MPTQMPFEGLLLGAALTVVGLIISWVVWRRKGASAGLRAVAWSLLPLAFG
LIGLMGLLASLAGQLVRFFGGLVFDPLAWAGVVVAGVAVVLWTIGRLLRG
RSRPAAPAEQPASTQGRPASPAVGKGSQGPRSSAGVDDEFAEIEELLRKR
GIT
>Tfu_2549 response regulator receiver
MTCVLLAEDDASISEPLARALRREGYSVDVTVDGMETLDRARSGDIDLLV
LDLGLPELDGLEVARRLRSEGHGTPILILTARADEVDTVVGLDAGADDYV
TKPFRLAELLARVRALLRRGGGEVPVVHGVRIDTDSRRAWLGDRELQLTT
KEFDLLRVLVREAGKVVTREQIMREVWDTNWWGSTKTLDMHISWLRRKLG
DDANQPSYITTVRGVGFRFEKE
>Tfu_0163 Tyrosine protein kinase:Serine/threonine protein kinase
MTSPLRPEDPTRVGDYDLVARIGKGGQGVVYLGKAPDGTRVAVKVMETSW
ASNSRARSRFAKEIEAASKVAPFCTAALLDSDINADPPYIVSEYIEGPSL
RDAVLRDGPRTGAALDRLAISTATALVAIHQAGVIHRDFKPANVLLGPDG
PRVIDFGIARHSEATVTATDSIVGTPAYMAPEQVEGRELTPAVDIFAWAG
VMVFAATGQSPFHDETLPAIINRVLHQPPRLDGVDERLRPLLEACLAKEP
ERRPTAVQVLGVLVGHDPATLPQVPVEEVLENGYTAALNEQTQIAATAAL
PIPIGDQAPEPAPTAVMPAAEDTPAPESRTPVSGLAALAANRPADEAPAS
SPPSGPLRTTSGLAALVNTGENKQPTASSPGEGPPRRSAGPGHQPLPPRS
TRERKTVLSWLVAAGILIIVLAGGWFLIDTFLLSPNGQSPEATPVDGTRR
DTPAQDGIDDSVPSPSAIDPDTPTSSDTGYPGGELYPSLPYDDMSQTDPM
EEPHLNPTIPGEGPWHSPPAGEEAPGQPHGGGAEEGGSEGGEQPGTGGPG
GSGEGGAGVGRVAVSPAAP
>Tfu_2446 conserved hypothetical protein
MSDRRTPDKASDGPGSPVRPYVMTEGREATNTVQLDMISVVISARGEVDE
LSLEPEQLAILDLCQRPLSVAEVAARLDIPVAVVKVLMGDLIARGYMLAR
APYTIQHPVVGRDVLQAVLDGIQRL
>Tfu_0100 RNA binding S1:Resolvase, RNase H-like fold
MTTSIHQRIAEELGVRERQVRAAVELLDDGATVPFIARYRKEVTEMLDDA
QLRAIEERLRYLRELEERRTVILESIKAQGKLTPELEAAIMAADSKARLE
DIYLPYKPKRRTKAQIAREAGLEPLADALLNDPSRDPHDQAAAYVDADKG
VADTAAALEGARAILVERFTEDADLIGELRERMWQRGRLVSRVREGKEEV
GVKFADYFDFAEAFTTLPSHRVLALFRGEKEEVLDLTLEPEEPAEDPRAR
SSYEVRIAQHFGIADQGRPGDRWLLDTVRWAWRTRILVRLDIDLRSRLWQ
EAEDEAVRVFAANLRDLLLAAPAGTRPTIGLDPGLRTGVKVAVVDGTGKV
VDTATIYPHEPQKRWDESIAVLAALAQKHRVELVAIGNGTASRETDRLAA
DLIKRHPELKLTKVMVSEAGASVYSASAYASQELPDLDVSLRGAVSIARR
LQDPLAELVKIDPKSIGVGQYQHDVSEVKLSRSLDAVVEDCVNAVGVDVN
TASVPLLSRVSGITASLAQNIVAYRDANGPFRTRAQLREVPRLGPKAFEQ
CAGFLRIPDGDDPLDSSSVHPEAYPVVRRILEATGRDIRALIGDTDTLRS
LRPDDFVDERFGLPTVTDILAELEKPGRDPRPEFQTAAFRDGVEDITDLE
PGMVLEGVVTNVAAFGAFVDVGVHHDGLVHVSAMSKSFVKDPRDVVKPGD
IVRVKVLDVDVRRKRISLTLRLDDEVDQRSGENNRSGGERRERGAPRRGD
QRRQRGGRGEQQPMGAMAEALRRAGLV
>Tfu_1749 conserved hypothetical protein
MSDYIPPAALPEHVLQRPDVQEALAQRDFGKLFYLTRKWAGISYSKIAAS
CGIKPERVGRLARGDGAVTTYDKILQICDGMRIPGHFLGLLPRPWEKQPD
QVGDPAP
>Tfu_2654 DNA-directed RNA polymerase, beta subunit
MAASRIASANALGPNRVSFARIKEPLEVPNLLALQTESFDWLLGNERWRA
RVEAARKAGRKDIPEQSGLEEIFEEISPIEDFSGTMSLSFRDHRFEPPKY
SEEECKDKDMTYSAPMFVTAEFINNDTGEIKSQTVFMGDFPLMTAKGTFI
INGTERVVVSQLVRSPGVYFDSQMDKSSDKELYGCKIIPSRGAWLEFEID
KRDFVGVRIDRKRKQAVTILLKALGWTTDQILERFGEYESIRATLEKDPT
AGTDDALLDIYRKLRPGEPPTKEAAQALLENLYFNPKRYDLAKVGRYKIN
KKLGLEIDITQGTLTEEDIVATVDYLVRLHAGEKELVRPHGTFPIEVDDI
DHFGNRRLRTVGELIQNQVRLGLARMERVVRERMTTQDVEAITPQTLINI
RPVVASIREFFGTSQLSQFMDQTNPLAGLTHKRRLSALGPGGLSRERAGF
EVRDVHPSHYGRMCPIETPEGPNIGLIGSLAAYARVNSFGFIETPYRKVV
DGRITDEVVYLTADEEDRYVIAQANTPVNPDGTFAESQVLARRKGGEFES
VAAEEVHYMDISPRQMVSVATAMIPFLEHDDANRALMGSNMQRQAVPLLR
AEAPLVGTGMEYRAATDAGDVILAEKSGVVEDVTADYITVLADDGTRKTY
RVHKFRRTNQGTCFNQRPIVEEGQRVEEGQVLADGPSTEAGEMALGKNLL
VAYMSWEGHNYEDAIVLSQRLVEEDILSSIHIEEHEVDARETKLGPEEIT
REIPNVSEEVLADLDERGIIRIGAEVVDGDILVGKVTPKGETELTPEERL
LRAIFGEKAREVRDTSLKVPHGESGKVIGVRVFSREEGDELPPGVNELVR
VYVAQKRKITDGDKLAGRHGNKGVIAKILPKEDMPFLEDGTPVDIVLNPL
GVPGRMNIGQIMEMHLGWLAKHGWKVEGDDAEWKRRLRDIGAHEAPPNSK
VATPVFDGAREDEISGLLSCVLPDQDGDILVNKFGKAKLYDGRTGEPFKE
PVAVGYAYFLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEM
EVWALEAYGAAYALQELLTIKSDDINGRVKVYEAIVKGENIPEPGIPESF
KVLIKEMQSLCLNVEVLSRDGMSIEMRDSEEDVFRAAEELGIDLGRREPS
SVEEV
>Tfu_2233 regulatory protein, LuxR:Response regulator receiver
MTQPADPPITVLLVDDDPLVRAGLTIMLGGAPDLRVVGDAGDGAQALALV
DEHHPDVVLMDIRMPGMDGLTATERLRARRNAPEVIVLTTFDADQHVLRA
LRAGAAGFLVKDTPPEEIVAAVRQVACGNPVLSPTVLRRLIARVADPEAD
LRRSRARQRLAHLNDREREVAVAVGRGLSNAQISAALHLSVPTVKTHVSA
ILAKFGFTNRVQIALLVHDAGLLDDATP
>Tfu_2090 RelA/SpoT protein
MRSETVSTHTKPVRPEPPAPAAEVPAGAFPPGQERDHDTRPSAPPRDQSP
PPAPEADSRSAARPAPPTHPGTSSTVWVRRRLARLGAQRGTTMNPVLEPL
VKTVRATHPKADIRLIERAYDVAAHYHRSQKRKSGDPYITHPLAVATILA
ELGMQEATIAAGLLHDTVEDTEYTLDQLRSDFGDEIAELVDGVTKLDKVK
YGEATQAETVRKMVVAMARDIRVLVIKLCDRLHNMRTLRYLPQAKREKKA
RETLEIYAPLAHRLGMNTIKWELEDLAFATLYPKRFDEIARLVAERAPRR
DVYLQEVIEIVSADLREAKIKATVRGRPKHYYSIYQKMIARNVGFDEIYD
LVGIRVIVDSVRDCYAALGIIHARWNPVPGRFKDYIAMPKFNMYQSLHTT
VIGPEGSPVELQIRTRAMHRRAEYGIAAHWKYKEERNNGGKAKGASTDMA
WLRQLIDWQQETKDPGEFLESLRFDLSVQEVFVFTPRGDVIALPQGATPV
DFAYAVHTEVGHRTVGARVNGRLVPLDSELHNGETVEIITAKTDDAGPSR
DWLDFVKSARARNKIRQWFTKERREAAIEQGKEAIAKVMRKQELPVQRLF
TSESLIALAHDLRYRDLDALYAAVGENQISAHKVVEKLIESVGSLDNNEE
DIAEATTPIRVPRKRPTGNPGVVVQGDPDVWVRLSKCCTPVPGDAIIGFV
TRGAGVSVHRDDCGNVKHLDPDRLVQVEWQPTGNSMFLVALQIEALDRTR
LLSDITRVLSDQHVNILSATVQTTRDRVALSRFTFEMADPAHLGHVLKAV
RSVDGVYDVYRVRN
>Tfu_0424 transcription-repair coupling factor
MPHVLRPLRAGRPSSHAPPGDMSLNGLLSVVTGDPALKRAIETARNGHDP
LLDLVAPPSVRPLIVAGLAADAPVGAGRPVLALTATEREAADLNSALGSL
LPADSVALFPAWETLPHERLSPRSDTVGQRLAVLRRLTHPDPDDPLTAPL
RVVVAPIRSVLQPLVSGLGDLQPVRVREGDSVALDELVQSLVDIGYSRVD
LVEKRGDIAVRGGILDVFPPTEEHPLRLEFWGDTVEEIRYFQVADQRSIS
KPGAAEAGLFAPPCRELLLTDTVRKRARALAAEYPALADILTKLADGVAV
EGMEAFAPVLADRMELLLDLLPPGTHIVGCDPERIRTRAQELVATSQEFL
EASWINAASGGEAPIDLGASAYQSIAELRSRARELGLPWWTVTPFDPGNP
AAAEDDHSVVVGASATDAYRGDTERAIADVKSWLHEGWRVVLLTPGQGPA
ERLASMLRDAGLGTQLRDALPEPPEPAVATVTTGLLEHGFVWRSVRTVLL
TETDLVGQRSSTRDMRRMPSRRRGVDPLQLKPGDYVVHEQHGIGRYVEMV
SRTIQGATREYLVIEYAPSKRGQPGDRLFVPTDQLDEVTRYVGGDSPTLS
KMGGSDWAKAKSRARKAVREIAGDLIRLYSARHASPGHAFSPDTPWQREL
EDAFPYVETPDQLAAIEEVKRDMEKPVPMDRLICGDVGYGKTEVAVRAAF
KAVQDGKQVAVLVPTTLLVQQHLSTFTERYASFPVTVRPLSRFQSDAEIE
RIREGMRTGEVDVVIGTHRLLSPETQFKDLGLVIIDEEQRFGVEHKEALK
RLRTQVDVLSMSATPIPRTLEMGLTGIREMTTILTPPEERHPVLTFVGPY
DEKQIAAAIRRELMREGQVFFVHNRVASIERAAATVSRLVPEARVAWAHG
QMNEHQLERVMVDFWEKKFDVLVCTTIVESGLDVPNANTLIVDRADTYGL
AQLHQLRGRVGRGRERAYAYFLYPPDKPLTETAHERLATVAQHTESGAGM
YVAMKDLEIRGAGNILGTEQSGSIAGVGFDLYVRMVGEAVRELKGDQSAA
QEVETKVELPINAHIPHDYVPGERLRLEAYRRIAEVASEDDIAAIREELL
DRYGEPPQPVDNLLAVARFRVLARSAGLTDVVLQGTQIRFAPVELRESQQ
LRLRRLYPKAVVKAATRTLMVPVPKSGGLGGKQLRDRELLTWCTELVEAI
FEPQRKPPQE
>Tfu_2825 putative LysR-family transcriptional regulator
MNLELLRTFLAVHRAGSLTRAASHLGMSQPTVTAQIRTLEKELGRQLFIR
RPDGVRPTGPADQLARRLAPHLDALEAVIETEVFQRVPFEQPLHIGGPTE
LLTVRVLPALAELVAEGLQLRTVTGMPDELLDGLLAGRHDLVVSTAPPRR
RGISSTPLMDEEFLLVAHPDWKDRLPADVAADAGKALDSVPVVAYAEELP
IIRRYWLTVFGRRPPMRAAVVVPDLRGVLATVVAGAGITVLPRYLAANAL
EQGELTVLHQPELSPINTIYLVVRAGSLAQQRIALVHQKLLTEARSW
>Tfu_0642 conserved hypothetical protein
MVQAYILIQTEVGRAAQVASAISTVEGVTQVDDVTGPYDVIVRAQAEDID
ALGRLVIARIQRLDGITRTLTCPVVNVES
>Tfu_2381 ATPaseDEAD/DEAH box helicase, N-terminal
MTLLQTTSTDDRLRGLRHWQREAFEEYFRREPRDFLAVATPGAGKTTFAL
TLASELLARHVVRSITVVCPTEHLKKQWAEAAARFNIPLDPDFKNSQGAL
GKHFIGAAVTYAQVAAHPALHRNRTEARRTLVIFDEIHHAGDSLSWGEAI
REAFDPATRRLCLTGTPFRSDTNPIPFVSYVQDHTGVRRCSWDYNYGYGP
ALADGVVRPVIFLAYSGEMRWRTRAGEELAARLGEELTQDALSQAWRAAL
DPKGDWIKRVLAAADRRLTEVRKHTPDAGGLVIASDHENARAYARILRQI
TGRGATVVLSDDPTASRKISQFAESDDRWMVAVKMVSEGVDVPRLMVGVY
ATSTSTPLFFAQAVGRFVRVRRRGEIASVFLPSIPVLLEYASEMERERDH
VLDKPIREDDGFVPEQELINEARKKRDTPDAGDELPFETMESEAEFDRAL
YDGGEIGGGEPDEEDFLGLPGLLEPDQVAVLLRKRRQERARTARSEPQQR
ERPEHEVLAELRRELNSLVGAWHHRTGQPHATIHTTLRRVCGGPPVAQAT
AEQLRQRIAKLRAWAVGAE
>Tfu_0384 Cold shock protein
MAQGTVKWFNSEKGFGFIAVDGGGPDVFVHYSAIAGTGFRNLEENQAVEF
EIVPGPKGPQAADVRAL
>Tfu_2778 helix-turn-helix motif
MSTEYQKALGRKIAQYRRRRGLSQREFAALINRSEAWVSQVERGVRKVDR
MSVLAAVAEVLDVPVAELAAEAPIVAATAKETPDSTRLRLVLSAAHALNA
LLAQKQPADLAELRPRVEQAWQLTHKGHYLELTDLLESLVPQLETAARSV
DDEQRTECFRLLASVYQACSSALSKLGDFAAAWVAAERAIVAAERADDPL
LMAAGEFRLCVTFQGAKHFHQVDTVARTSIEALSSLASNDRPEVLSLMGA
LTLQRAIAAARSNDATAAYTHLISARSLAQQLGADRNDFHTEFGPTNVSL
HEVSVAVDLGDAGIALRAAATVDASDLSAERRGRFLIDVARAHLQRRNLD
KAIHTLHQAESITPEQVHSHPLARQAIGDLLTIQDPASPALQELARRAGM
L
>Tfu_1406 regulatory protein GntR, HTH
MATDFVRIDPNSKVPPYEQIRAAVANAAASGRLPVGYKLPTVRALASELS
VAVNTAARAYRELEQAGVVETRGRSGTFIAAGGDRQRAEALAAARRYAET
VSRLGISQQEAVDIVRAAVENLTR
>Tfu_3048 regulatory protein GntR, HTH
MVELSQKPGDASRLDRNPLREQIRRVLVDGLLSGRWKPGERIVERRVAAE
LNVSQAPVREALRELEALRLIESVPNKGARVRDFGVADMAEIYPVRAGLE
LVAARLAAPRLAEDIRPLEREVEALREATAAGDVDGQIKHSVEFHREIVR
AAHNSVLLHTWESLGVEVWTALSVRWLNMELHAKVADHWAITQAFRNRDP
HVGQMLSDHVLNYVEAALRSRDSVS
>Tfu_1009 conserved hypothetical protein
MARHHRRSLRRRITDLVDTLLGRTRPRRANLDQLFALPSAAITLRVATGL
RPTGHASVAFRPAEGEAFATVQQEILDLLNTGSGPTTEVQRDEYGYTWLV
VRSPASEEGGGLTGLVTDLHAVNSSLESAGFGPSLLCSLVVFAAPDGRRL
ALVYLYKRGTFYPFAPKGDHDRDNALELQVSAALEGELAMEMDKSRWFPV
YGAPGL
>Tfu_1440 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
MTEKTITEQFSFADLGLRPELLDALAEVGYEEPTAIQREAIPSLLEGRDL
LGQAATGTGKTAAFSLPILHRLPDSDRGDTPSALILVPTRELALQVSEAL
HRYGRHLKARILPIYGGQPIGRQLRALERGVDVVVATPGRALDHIGRGTL
VLDTVRTVVLDEADEMLDMGFAEDIEAIIEEVPENRQTVLFSATMPDRIE
GIARRHLTDPVRVRIARTSPAPGEEPKVRQNAYIVARPYKPAALGRVLDM
ESPTAALVFCRTREEVDQLTETLNARGYRAEALHGGMSQEQRDRVMARLR
GGTADLLIATDVAARGLDIEHLTHVVNYNVPSATETYVHRIGRVGRAGRE
GVAITLVEPREHRMLKTIQRSTSGPISVEKLPTVADLRARRVELTRAALH
EALKEEDDDREAFRVVVESLAEEFDIMEIALAAVKLAHEASGAVTEEEEI
PEPVLRPERSERRERRGRRGGPGRGERRGRGPSDGMTRLFVGIGRNARVR
PQDLVGAIAGETALSGRDIGAIEIADRFSLVEVPESTADGVIAALKKSTI
KGRRTVVRRERF
>Tfu_0300 putative acetyltransferase
MFGQQAPSEDRHSSDTESNHSLKAGEAADVALEPPTLDDGRQLWALARIS
DLDVNSPYAYVLWCRDFAATSLVARDSTGTIRGFVTGYVRPDAPDTYFLW
QVAVDPAFRGRRLARRMLDRISSCITERGIRYLEATVTPGNTASRALFAS
FARARSAALSWTPLFDRGHFPAELPEQHEPEDLVRIGPLR
>Tfu_1803 helix-turn-helix motif
MAGRYSPSARRRRLSALLRKMREERGLTIDEVSRRLDWPSGKLSRMERNE
WKHPSPRDMQDLAEVYELSPEMREAVINLARESRVRGWWVEYRDVLRGGL
ADFEAGASMIRTYEALLIPGLLQTPDYAAAVMRSGRVMDGDDITRKVAGR
MRRQQVLEGDDPLYLWALIDEAALRKQVGGREVMTAQIQRLIDMAARPNV
DIQVVRDSFGAHAAIDGSFMILDFQDPADPPMVYLETATDDLYLEDPKVV
QRYVGIFGHTCSAAETPQRSVAYLKNLIA
>Tfu_2659 transcription antitermination protein NusG
MSESPLTSDDLPNEERDQSSAEETGPRAEQAEAAEVADEVEAQESDTSKD
QTPELDPIEEFKAELRLLPGEWYVVHTYAGYENRVKANLENRTQSLNMED
YIFQVEVPTQEVTEVKSGKRQQVTEKVLPGYVLVRMELTDESWAAVRHTP
GVTGFVGLSNRPVPLSLDEVAELLAPEPETEEEQAKKEAEPRGEVEYEIG
ESVTVMDGPFATLPATVSEVNPDTQKLKVLVSIFGRETPVELGFNQVSKI
>Tfu_1752 Protein phosphatase 2C-like
MDSRSRRHTASPTTSRTFGVDDRTASSPDASRQCTLLRDRLGFLNDATMA
IGASLDPEKTAWGLADALVPTLADFAVVYLADALRLPHDLDANPPELFSS
SRHLWQAAVTHDNHPRWEALTVKDDTWSPEPTHPVYRAMASGDPVTFSVD
ADIAAVLDSSSRHDLVGCSLLVVPLSVRGRKLGSAVVARHPGSPGFSEVD
ILTVRQLAAQTSLGVDNGYLYRARSRVGDWLQRSMLPQLPERLSSVDIAY
RYVSSSHTAQVGGDWFDAIPLPGNRVALVVGDVMGHGVRSAAVMGQFRTA
MQTLAAMDLPPDHVLRHLDDLAHQLGDSYLATCLYAVYDPVIHRCTIASA
GHVPPVLLRQDGTTEILRTPTGAPIGLGGVAFESFEFTVADGDVLVLCTD
GLVETRTRDVESGLEVLRSHLTDPQRPVEEQCRTLLQALSTPDQEDDVAL
LVARLRGIPSGDFAQWMLQPRPTTPGLARRLLRTTLAEWGLEEMTDLVEL
LATEVITNAVRYASRPIDLRLLRTDILLCEVTDDDQHRPVLRQASATDEN
GRGLQLVSHLSRRWGASAKTTGKVVWFELDLPEGARRGTAD
>Tfu_2716 alanine-rich protein
MRDADIVHAIAKDERDGLSAAYRAYADRLYDYSLVTLDDAEAAADTVHDV
FLIAREQIARLRDTHALRPWLYALTRAQCHRALRLRDGHPPPDLLDGHPS
HATLSPDDPRLLLHEALCGLPPHEREILHLTVRHQLAGPELAAILGTSRR
RADARAAAAHASFTDAVGVLLAVRRTEAHCPALRTLLQPWDGGHLTPAWR
KRITRHLRTCPDCDRTRAALPAPDALRDAFPLTAPPAFLHDQLLTNAFDP
GLAAHHAEFAAQAGPYRNDGFPATGGPAEETALPCTRLPAVLTLAAALLF
LVLIGWAALPLLTAVVTGSTGVEAIPVVSLEPAEPPSPASSPHS
>Tfu_2987 hypothetical protein
MSEAKTARSSGETLRARKQRQTREAIHRAALRRALEYGIDNVTVAEVSAE
ANVSPRTFFNYFPTKEDAILGLRDVQDSVAEDAAMESLMDREPTGDLLAD
VTNLVRSVFSATLSGNTRDQIREAVIRYPQLRRRQLERFSLVEQRLGRIV
ARHLESDPRFSDGSLDIEDAARMIVAICAGAIRFAIHKSADHHAASLEET
EHHFDQTVELLRKVIQKLQ
>Tfu_1626 regulatory protein GntR, HTH
MTSESPVRAAPRAGRMTVTRRAVEQIKAMIADGTLHPGQRLPTERELAAK
MGLSRSSMREAIRVLTTLGVLEARHGAGVYVTELHPRRLLEPFSVLAEVG
RGTTLLEMLHVRRIVEPAAAALAAVRASDTHLSTLAALLDAEDHACGLAA
TEAGTAFHRTLAELAGNATLAALIDGLASPALGARIHRDPAADEEEWAAQ
LRGDHHIIYRALQNRDPEAAQAATTLHLLRLEERFRDRIAV