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2024-05-02 16:41:38

Gene list

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COG category: Transcription
Organism: Escherichia coli O157:H7 EDL933, EDL933

Number of genes found: 359

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Z0405 chromosome CDS385212 711 - 0.495077
NA Z1818 putative antirepressor protein encoded by prophage CP-933Nchromosome CDS1661164 879 + 0.442548
NA Z2400 partial putative represssor protein encoded within prophage CP-933Rchromosome CDS2157531 297 + 0.414141
NA Z3798 orf, hypothetical proteinchromosome CDS3452135 489 - 0.533742
NA Z5899 putative ATP-dependent helicasechromosome CDS5403784 2859 + 0.501924
NA Z3358 putative repressor protein CI of prophage CP-933Vchromosome CDS3004015 648 + 0.521605
NA Z1124 putative prophage regulatory proteinchromosome CDS1063113 297 + 0.454545
NA Z5200 chromosome CDS4743737 1989 - 0.363499
NA Z2048 unknown protein encoded by prophage CP-933Ochromosome CDS1857036 1041 + 0.503362
NA Z3495 putative regulatorchromosome CDS3147940 879 + 0.428896
NA Z4777 orf; hypothetical proteinchromosome CDS4335456 486 + 0.465021
NA Z4258 partial putative transcriptional regulator LYSR-typechromosome CDS3871379 579 - 0.426598
NA Z0392 chromosome CDS370480 477 - 0.459119
NA Z4381 orf; hypothetical proteinchromosome CDS3979657 888 - 0.519144
NA Z2874 putative regulatorchromosome CDS2586345 792 - 0.494949
NA Z2753 orf, hypothetical proteinchromosome CDS2482316 291 + 0.439863
NA Z3354 putative exclusion protein ren of prophage CP-933Vchromosome CDS3001321 291 - 0.505155
NA Z0309 putative cI repressor protein for prophage CP-933Hchromosome CDS301940 714 - 0.462185
NA Z4048 putative regulatorchromosome CDS3653820 441 + 0.514739
NA Z2092 unknown protein encoded within prophage CP-933Ochromosome CDS1883871 426 + 0.530516
NA Z3506 putative regulatorchromosome CDS3161898 783 - 0.50447
NA Z1204 unknownchromosome CDS1127185 639 + 0.525822
NA Z2059 unknown protein encoded by prophage CP-933Ochromosome CDS1864312 321 + 0.47352
NA Z4874 putative regulatorchromosome CDS4421005 756 + 0.42328
NA Z1932 orf; hypothetical proteinchromosome CDS1754406 336 + 0.431548
NA Z3025 chromosome CDS2710471 300 + 0.45
NA Z2521 putative DEOR-type transcriptional regulatorchromosome CDS2242123 750 + 0.493333
NA Z2666 orf, hypothetical proteinchromosome CDS2400943 600 + 0.52
NA Z1309 orf, hypothetical proteinchromosome CDS1239832 630 + 0.479365
NA Z1188 unknownchromosome CDS1113397 198 + 0.474747
NA Z5987 chromosome CDS5509599 264 - 0.416667
NA Z6021 orf, hypothetical proteinchromosome CDS2281573 912 - 0.379386
NA Z2199 orf, hypothetical proteinchromosome CDS1973409 204 + 0.455882
NA Z2958 orf, hypothetical proteinchromosome CDS2663874 273 + 0.483516
NA Z5000 putative regulatory proteinchromosome CDS4555138 816 - 0.525735
NA Z1020 putative ATP-dependent helicasechromosome CDS959163 2151 + 0.537424
NA Z0342 putative LysR-like transcriptional regulatorchromosome CDS323657 900 - 0.5
NA Z3626 sucrose specific transcriptional regulatorchromosome CDS3275824 996 - 0.517068
NA Z1059 chromosome CDS1002725 330 - 0.460606
NA Z1531 chromosome CDS1423263 813 - 0.337023
NA Z3946 putative DNA binding proteinchromosome CDS3566030 207 - 0.425121
NA Z4184 chromosome CDS3789283 501 + 0.335329
NA Z4176 putative 2-component transcriptional regulatorchromosome CDS3784402 447 - 0.360179
NA Z3395 putative regulatorchromosome CDS3035797 957 + 0.496343
NA Z2851 putative enzymechromosome CDS2568358 1911 - 0.554683
NA Z1644 unknownchromosome CDS1522791 639 + 0.525822
NA Z2209 putative ARAC-type regulatory proteinchromosome CDS1983539 762 + 0.392388
NA Z2280 multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport systemchromosome CDS2061301 1407 - 0.515991
NA Z0885 putative LysR-like transcriptional regulatorchromosome CDS843834 906 + 0.444812
NA Z1444 putative serine/threonine kinase encoded by bacteriophage BP-933Wchromosome CDS1340932 1047 - 0.354346
NA Z2090 putative repressor protein encoded within prophage CP-933Ochromosome CDS1882915 639 - 0.43662
NA Z4198 putative regulatory protein for type III secretion apparatuschromosome CDS3801439 750 - 0.385333
NA Z2510 putative transcriptional repressorchromosome CDS2234385 567 - 0.481481
NA Z3646 putative 2-component transcriptional regulatorchromosome CDS3298477 735 + 0.472109
NA Z5888 chromosome CDS5386343 465 + 0.505376
NA Z2104 putative ARAC-type regulatory protein of CP-933Ochromosome CDS1892210 714 + 0.435574
NA Z4045 orf; hypothetical proteinchromosome CDS3651439 237 - 0.548523
NA Z4832 orf; hypothetical proteinchromosome CDS4384073 528 - 0.454545
NA Z3647 putative ARAC-type regulatory proteinchromosome CDS3299224 858 + 0.532634
NA Z0321 putative AraC-type regulatory protein encoded in prophage CP-933Hchromosome CDS309101 744 + 0.352151
NA Z1039 putative toxinchromosome CDS979145 468 + 0.532051
NA Z0371 putative LysR-like transcriptional regulatorchromosome CDS350967 990 + 0.429293
NA Z5151 orf; hypothetical proteinchromosome CDS4697627 324 + 0.450617
NA Z3966 orf, hypothetical proteinchromosome CDS3586688 300 + 0.53
NA Z0463 putative response regulator; hexosephosphate transportchromosome CDS445304 630 - 0.538095
NA Z0509 unknownchromosome CDS494258 243 + 0.44856
NA Z1789 putative envelope protein encoded within prophage CP-933Nchromosome CDS1640255 714 + 0.422969
NA Z5684 putative transcriptional regulatorchromosome CDS5189540 726 + 0.548209
NA Z1447 putative repressor protein CI of bacteriophage BP-933Wchromosome CDS1342903 708 - 0.451977
NA Z1627 chromosome CDS1509005 198 + 0.474747
NA Z2969 unknown protein encoded by prophage CP-933Tchromosome CDS2670389 405 - 0.439506
NA Z5868 chromosome CDS5364435 294 - 0.482993
NA Z2269 orf, hypothetical proteinchromosome CDS2051783 723 - 0.441217
NA Z0067 chromosome CDS65291 2907 - 0.550052
NA Z2164 chromosome CDS1940038 984 - 0.506098
NA Z2808 putative DEOR-type transcriptional regulatorchromosome CDS2530916 759 - 0.424242
NA Z3126 putative repressor protein of prophage CP-933Uchromosome CDS2782567 591 + 0.431472
NA Z1772 unknown protein encoded by prophage CP-933Nchromosome CDS1630668 426 + 0.528169
NA Z3973 chromosome CDS3590101 1335 - 0.53633
NA Z0336 putative regulatory protein encoded in prophage CP-933Ichromosome CDS318190 261 + 0.563218
NA Z1563 putative prophage regulatory proteinchromosome CDS1458720 297 + 0.454545
NA Z2395 unknown protein encoded within prophage CP-933Rchromosome CDS2154375 813 - 0.510455
NA Z0346 putative LysR-like transcriptional regulatorchromosome CDS326525 885 - 0.536723
NA Z2724 putative ARAC-type regulatory proteinchromosome CDS2453300 912 - 0.419956
NA Z5619 putative transcriptional regulator of sorbose uptake and utilization geneschromosome CDS5112437 969 - 0.494324
NA Z2299 putative transcriptional regulator LYSR-typechromosome CDS2075757 1065 + 0.483568
NA Z2045 similar to DicA, regulator of DicB encoded by prophage CP-933Ochromosome CDS1855818 408 - 0.45098
NA Z1503 unknown protein encoded by bacteriophage BP-933Wchromosome CDS1391294 630 - 0.473016
NA Z0442 putative AraC-like transcriptional regulatorchromosome CDS424325 954 - 0.51782
NA Z1333 similar to DicA, regulator of DicB; encoded within cryptic prophage CP-933Mchromosome CDS1257186 399 - 0.463659
acrR Z0579 acrAB operon repressorchromosome CDS551829 648 + 0.449074
adiY Z5718 putative ARAC-type regulatory proteinchromosome CDS5221602 762 - 0.410761
agaR Z4483 putative DEOR-type transcriptional regulator of aga operonchromosome CDS4084307 810 - 0.52716
araC Z0073 transcriptional regulator for ara operonchromosome CDS75234 879 + 0.52901
arcA Z6004 negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)chromosome CDS5526383 717 - 0.509066
argR Z4596 repressor of arg regulon; cer-mediated site specific recombinationchromosome CDS4187157 471 + 0.484076
arsR Z4903 transcriptional repressor of chromosomal ars operonchromosome CDS4450069 354 + 0.5
ascG Z4022 ascBF operon repressorchromosome CDS3629271 1014 - 0.525641
asnC Z5244 regulator for asnA, asnC and gidAchromosome CDS4788970 459 - 0.507625
baeR Z3248 transcriptional response regulatory protein (sensor BaeS)chromosome CDS2909928 723 + 0.538036
basR Z5715 transcriptional regulatory protein, member of 2-component regulatory system,chromosome CDS5217716 669 - 0.532138
betI Z0400 probably transcriptional repressor of bet geneschromosome CDS376413 588 - 0.568027
bglJ Z5967 2-component transcriptional regulatorchromosome CDS5492514 678 + 0.454277
birA Z5544 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressorchromosome CDS5050862 966 + 0.493789
cadC Z5736 transcriptional activator of cad operonchromosome CDS5244832 1539 - 0.420403
cbl Z3146 transcriptional regulator cys regulon; accessory regulatory circuit affecting cysMchromosome CDS2805799 951 - 0.478444
celD Z2765 negative transcriptional regulator of cel operonchromosome CDS2493319 843 - 0.413998
citB Z0765 sequence similarity to Shigella regulatorchromosome CDS734999 681 + 0.506608
cobB Z1761 putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferasechromosome CDS1623741 822 + 0.512165
cpxR Z5457 transcriptional regulator in 2-component systemchromosome CDS4973696 699 - 0.516452
creB Z6001 catabolic regulation response regulatorchromosome CDS5522800 690 + 0.552174
csgD Z1673 putative 2-component transcriptional regulator for 2nd curli operonchromosome CDS1546771 651 - 0.417819
csiE Z3804 orf, hypothetical proteinchromosome CDS3455752 1302 + 0.510753
cspA Z4981 cold shock protein 7.4, transcriptional activator of hnschromosome CDS4534852 213 + 0.492958
cspC Z2868 cold shock proteinchromosome CDS2584262 210 - 0.466667
cspD Z1117 cold shock proteinchromosome CDS1055101 225 - 0.484444
cspE Z0769 cold shock proteinchromosome CDS738429 210 + 0.438095
cspG Z1406 homolog of Salmonella cold shock proteinchromosome CDS1314632 213 + 0.431925
cspH Z1405 cold shock-like proteinchromosome CDS1314134 213 - 0.474178
cynR Z0434 cyn operon positive regulatorchromosome CDS414568 900 - 0.553333
cysB Z2535 positive transcriptional regulator for cysteine regulonchromosome CDS2251640 975 - 0.482051
cytR Z5481 regulator for deo operon, udp, cdd, tsx, nupC, and nupGchromosome CDS4993687 1026 - 0.519493
dbpA Z2417 ATP-dependent RNA helicasechromosome CDS2166810 1374 - 0.517467
deaD Z4523 inducible ATP-independent RNA helicasechromosome CDS4115684 1941 - 0.548686
deoR Z1067 transcriptional repressor for deo operon, tsx, nupGchromosome CDS1008921 759 - 0.503294
ebgR Z4428 regulator of ebg operonchromosome CDS4028312 984 + 0.514228
emrR Z3985 regulator of plasmid mcrB operon (microcin B17 synthesis)chromosome CDS3602218 531 + 0.489642
envR Z4624 putative transcriptional regulatorchromosome CDS4214980 663 - 0.441931
envY Z0696 envelope protein; thermoregulation of porin biosynthesischromosome CDS656998 762 - 0.461942
evgA Z3631 putative positive transcription regulator (sensor EvgS)chromosome CDS3281851 615 + 0.4
exuR Z4448 negative regulator of exu regulon, exuT, uxaAC, and uxuBchromosome CDS4053485 792 + 0.511364
fadR Z1950 negative regulator for fad regulon, and positive activator of fabAchromosome CDS1767832 720 + 0.513889
fhlA Z4040 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operonschromosome CDS3645320 2079 + 0.521405
fimZ Z0693 fimbrial Z protein; probable signal transducerchromosome CDS656001 696 - 0.37069
fis Z4621 site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcriptionchromosome CDS4213449 297 + 0.47138
flgM Z1709 anti-FliA (anti-sigma) factor; also known as RflB proteinchromosome CDS1574065 294 - 0.517007
fliA Z3012 flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operonschromosome CDS2698552 720 - 0.534722
fruR Z0090 transcriptional repressor of fru operon and otherschromosome CDS92634 1005 + 0.548259
frvR Z5440 putative frv operon regulatory proteinchromosome CDS4955507 1749 - 0.494568
fucR Z4122 positive regulator of the fuc operonchromosome CDS3729066 732 + 0.479508
galR Z4155 repressor of galETK operonchromosome CDS3766299 1032 + 0.528101
galS Z3407 mgl repressor, galactose operon inducerchromosome CDS3046889 1041 - 0.521614
gatR Z3253 galactitol utilization operon repressorchromosome CDS2914716 447 - 0.44519
gcvA Z4125 positive regulator of gcv operonchromosome CDS3731348 918 - 0.490196
glpR Z4781 repressor of the glp operonchromosome CDS4340017 759 - 0.54809
gntR Z4806 regulator of gluconate (gnt) operonchromosome CDS4364207 966 - 0.547619
greA Z4543 transcription elongation factor: cleaves 3' nucleotide of paused mRNAchromosome CDS4137953 462 - 0.487013
greB Z4761 transcription elongation factor and transcript cleavagechromosome CDS4316192 513 + 0.493177
gutM Z4013 glucitol operon activatorchromosome CDS3619841 360 + 0.55
hcaR Z3808 transcriptional activator of hca clusterchromosome CDS3458345 891 - 0.500561
hyfR Z3751 putative 2-component regulator, interaction with sigma 54chromosome CDS3397877 2040 + 0.526961
hypB Z4036 guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3chromosome CDS3641983 873 + 0.550974
iciA Z4253 replication initiation inhibitor, binds to 13-mers at oriCchromosome CDS3864537 894 + 0.542506
iclR Z5609 repressor of aceBA operonchromosome CDS5099950 864 - 0.53588
ilvY Z5284 positive regulator for ilvCchromosome CDS4819358 894 - 0.5783
kdpE Z0841 regulator of kdp operon (transcriptional effector)chromosome CDS799266 678 - 0.564897
lacI Z0441 transcriptional repressor of the lac operonchromosome CDS423206 1083 - 0.562327
leuO Z0086 probable transcriptional activator for leuABCD operonchromosome CDS88956 963 + 0.457944
lexA Z5642 regulator for SOS(lexA) regulonchromosome CDS5140283 609 + 0.522168
lldR Z5031 transcriptional regulatorchromosome CDS4594880 777 + 0.540541
lrhA Z3549 NADH dehydrogenase transcriptional regulator, LysR familychromosome CDS3201829 939 - 0.497338
lrp Z1234 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport systemchromosome CDS1152895 495 + 0.476768
lysR Z4157 positive regulator for lyschromosome CDS3768721 936 + 0.53312
malI Z2625 repressor of malX and Y geneschromosome CDS2373068 1029 - 0.546161
malT Z4774 positive regulator of mal regulonchromosome CDS4332415 2706 + 0.54065
marA Z2170 multiple antibiotic resistance; transcriptional activator of defense systemschromosome CDS1944102 390 - 0.45641
marR Z2171 multiple antibiotic resistance protein; repressor of mar operonchromosome CDS1944505 378 - 0.5
melR Z5720 regulator of melibiose operonchromosome CDS5225154 909 - 0.49835
metJ Z5493 repressor of all met genes but metFchromosome CDS5003726 318 - 0.518868
metR Z5349 regulator for metE and metHchromosome CDS4876937 954 - 0.568134
mfd Z1754 transcription-repair coupling factor; mutation frequency declinechromosome CDS1614739 3447 - 0.549173
mhpR Z0444 transcriptional regulator for mhp operonchromosome CDS426189 873 - 0.547537
mlc Z2587 putative NAGC-like transcriptional regulatorchromosome CDS2342431 1221 - 0.524161
mtlR Z5025 repressor for mtlchromosome CDS4585366 588 + 0.513605
nac Z3147 nitrogen assimilation control proteinchromosome CDS2806851 918 - 0.490196
nagC Z0823 transcriptional repressor of nag (N-acetylglucosamine) operonchromosome CDS780178 1221 - 0.531532
narL Z1996 pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor geneschromosome CDS1812461 651 - 0.519201
narP Z3450 nitrate/nitrite response regulator (sensor NarQ)chromosome CDS3095498 648 + 0.520062
nhaR Z0019 transcriptional activator of nhaAchromosome CDS17383 906 + 0.475717
nlp Z4551 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Muchromosome CDS4144478 279 + 0.501792
nrfB Z5670 formate-dependent nitrite reductase; a penta-haeme cytochrome cchromosome CDS5172373 573 + 0.542757
nusA Z4530 transcription pausing; L factorchromosome CDS4125753 1488 - 0.52957
nusB Z0518 transcription termination; L factorchromosome CDS499394 420 + 0.535714
nusG Z5555 component in transcription antiterminationchromosome CDS5055506 546 + 0.516484
ompR Z4760 response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesischromosome CDS4315281 720 - 0.548611
oxyR Z5519 activator, hydrogen peroxide-inducible geneschromosome CDS5033893 918 + 0.559913
pdhR Z0123 transcriptional regulator for pyruvate dehydrogenase complexchromosome CDS126582 765 + 0.554248
phnF Z5705 putative transcriptional regulatorchromosome CDS5206537 726 - 0.62259
phnO Z5696 putative regulator, phn operonchromosome CDS5199943 330 - 0.581818
phoB Z0497 positive response regulator for pho regulon, sensor is PhoR (or CreC)chromosome CDS479125 690 + 0.543478
phoP Z1859 transcriptional regulatory proteinchromosome CDS1695474 672 - 0.473214
prpR Z0426 regulator for prp operonchromosome CDS403558 1587 - 0.552615
pspA Z2482 phage shock protein, putative inner membrane proteinchromosome CDS2210603 669 - 0.496263
pspC Z2479 phage shock protein: activates phage shock-protein expressionchromosome CDS2209966 360 - 0.494444
pspF Z2484 psp operon transcriptional activatorchromosome CDS2211423 993 + 0.520644
purR Z2681 transcriptional repressor for pur regulon, glyA, glnB, prsA, speAchromosome CDS2412749 1026 + 0.530214
qseA Z4602 quorum sensing Escherichia coli regulator Achromosome CDS4191972 930 + 0.526882
qseB Z4377 quorum sensing Escherichia coli regulator Bchromosome CDS3976571 660 + 0.516667
rbsR Z5254 regulator for rbs operonchromosome CDS4800652 993 + 0.504532
rcsA Z3041 positive regulator for ctr capsule biosynthesis, positive transcription factorchromosome CDS2723727 624 + 0.383013
rcsB Z3476 positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)chromosome CDS3120433 651 + 0.470046
recG Z5078 DNA helicase, resolution of Holliday junctions, branch migrationchromosome CDS4638022 2115 + 0.568794
relA Z4099 (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factorchromosome CDS3701114 2235 - 0.536913
rfaH Z5362 transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysinchromosome CDS4889406 489 - 0.501023
rhaR Z5450 positive regulator for rhaRS operonchromosome CDS4967280 939 + 0.496273
rhaS Z5449 positive regulator for rhaBAD operonchromosome CDS4966460 837 + 0.512545
rhlB Z5290 putative ATP-dependent RNA helicasechromosome CDS4826756 1266 - 0.525276
rhlE Z1017 putative ATP-dependent RNA helicasechromosome CDS954892 1368 + 0.562865
rho Z5293 transcription termination factor Rho; polarity suppressorchromosome CDS4828808 1260 + 0.503968
rnb Z2514 RNase II, mRNA degradationchromosome CDS2237557 1935 + 0.527132
rnc Z3848 RNase III, ds RNAchromosome CDS3493606 681 - 0.506608
rnk Z0754 regulator of nucleoside diphosphate kinasechromosome CDS724693 411 - 0.545012
rob Z5999 right origin-binding proteinchromosome CDS5521234 870 - 0.531034
rpoA Z4665 RNA polymerase, alpha subunitchromosome CDS4242274 990 - 0.522222
rpoB Z5560 RNA polymerase, beta subunitchromosome CDS5058887 4029 + 0.525192
rpoC Z5561 RNA polymerase, beta prime subunitchromosome CDS5062992 4224 + 0.538352
rpoD Z4420 RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatureschromosome CDS4019893 1842 + 0.529316
rpoE Z3855 RNA polymerase, sigma-E factor; heat shock and oxidative stresschromosome CDS3499649 576 - 0.487847
rpoH Z4835 RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatureschromosome CDS4386397 855 - 0.540351
rpoN Z4565 RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulationchromosome CDS4154286 1434 + 0.527894
rpoS Z4049 RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteinschromosome CDS3654380 993 - 0.515609
rpoZ Z5075 RNA polymerase, omega subunitchromosome CDS4634951 276 + 0.532609
rstA Z2609 response transcriptional regulatory protein (RstB sensor)chromosome CDS2357237 729 + 0.491084
rtcR Z4780 putative 2-component regulatorchromosome CDS4338437 1599 + 0.547217
sdiA Z3004 transcriptional regulator of ftsQAZ gene clusterchromosome CDS2693592 723 - 0.471646
slyA Z2657 transcriptional regulator for cryptic hemolysinchromosome CDS2395310 441 - 0.47619
sohA Z4481 putative protease; htrA suppressor proteinchromosome CDS4083453 336 + 0.47619
soxR Z5662 redox-sensing activator of soxSchromosome CDS5160600 465 + 0.522581
soxS Z5661 regulation of superoxide response regulonchromosome CDS5160191 324 - 0.512346
spoT Z5076 (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolasechromosome CDS4635245 2109 + 0.539592
srlR Z4014 regulator for gut (srl), glucitol operonchromosome CDS3620352 690 + 0.482609
srmB Z3859 ATP-dependent RNA helicasechromosome CDS3503108 1335 + 0.546067
tdcA Z4470 transcriptional activator of tdc operonchromosome CDS4072972 939 - 0.42066
terW Z1164 unknown associated with putative tellurite resistancechromosome CDS1093623 468 - 0.495726
terW_2 Z1603 unknown associated with putative tellurite resistancechromosome CDS1489230 468 - 0.495726
torR Z1412 response transcriptional regulator for torA (sensor TorS)chromosome CDS1320432 693 - 0.531025
treR Z5851 repressor of treA,B,Cchromosome CDS5351823 948 - 0.535865
trpR Z5995 regulator for trp operon and aroH; trp aporepressorchromosome CDS5519553 327 + 0.541284
ttk Z5065 putative transcriptional regulatorchromosome CDS4627294 639 + 0.521127
tyrR Z2454 transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transportchromosome CDS2191092 1542 - 0.514916
uhpA Z5159 response regulator, positive activator of uhpT transcription (sensor, uhpB)chromosome CDS4706251 591 - 0.580372
uidR Z2623 repressor for uid operonchromosome CDS2371370 591 - 0.507614
umuD Z1946 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuCchromosome CDS1763660 420 + 0.483333
ureG Z1148 putative urease accessory protein Gchromosome CDS1082930 618 + 0.537217
ureG_2 Z1587 putative urease accessory protein Gchromosome CDS1478537 618 + 0.537217
uvrY Z3002 putative 2-component transcriptional regulatorchromosome CDS2692185 657 - 0.497717
uxuR Z5922 regulator for uxu operonchromosome CDS5439402 774 + 0.537468
vacB Z5786 putative enzymechromosome CDS5290324 2484 + 0.548309
waaP Z5054 putative LPS biosynthesis enzymechromosome CDS4618000 807 - 0.473358
xylR Z4994 putative regulator of xyl operonchromosome CDS4548378 1179 + 0.487701
yaeG Z0174 orf, hypothetical proteinchromosome CDS186645 1176 + 0.527211
yaeO Z0201 orf, hypothetical proteinchromosome CDS217023 261 - 0.478927
yafC Z0230 putative transcriptional regulator LYSR-typechromosome CDS233297 915 - 0.499454
yafP Z0295 orf, hypothetical proteinchromosome CDS290596 453 + 0.441501
yaiV Z0470 orf, hypothetical proteinchromosome CDS454242 669 + 0.403587
yajF Z0493 chromosome CDS472094 1047 + 0.543458
ybaD Z0514 orf, hypothetical proteinchromosome CDS497259 450 + 0.508889
ybaO Z0555 putative transcriptional regulatorchromosome CDS534449 459 + 0.520697
ybbI Z0636 putative transcriptional regulatorchromosome CDS604925 333 + 0.585586
ybbS Z0658 putative transcriptional regulator LYSR-typechromosome CDS623582 927 - 0.519957
ybbU Z0660 putative regulatorchromosome CDS625298 816 + 0.530637
ybdM Z0744 orf, hypothetical proteinchromosome CDS715998 630 - 0.469841
ybdO Z0747 putative transcriptional regulator LYSR-typechromosome CDS717967 903 - 0.386489
ybeF Z0774 chromosome CDS741562 801 - 0.47191
ybhD Z0939 putative transcriptional regulator LYSR-typechromosome CDS885143 1017 - 0.440511
ybiH Z1016 putative transcriptional regulatorchromosome CDS953992 684 - 0.54386
ycdC Z1512 putative tet operon regulatorchromosome CDS1398834 639 + 0.510172
ycfQ Z1750 chromosome CDS1612420 711 - 0.500703
ycfX Z1760 putative NAGC-like transcriptional regulatorchromosome CDS1622814 912 + 0.533991
ycjC Z2489 orf, hypothetical proteinchromosome CDS2216768 558 - 0.507168
ycjW Z2461 putative LACI-type transcriptional regulatorchromosome CDS2195391 999 + 0.452452
ycjZ Z2439 putative transcriptional regulator LYSR-typechromosome CDS2184918 900 - 0.47
ydaK Z2423 putative transcriptional regulator LYSR-typechromosome CDS2172045 909 - 0.49505
ydcN Z2285 orf, hypothetical proteinchromosome CDS2066002 537 - 0.49162
ydeW Z2193 putative transcriptional regulator, sorC familychromosome CDS1963309 954 + 0.510482
ydfH Z2157 orf, hypothetical proteinchromosome CDS1933537 687 - 0.499272
ydhB Z2682 putative transcriptional regulator LYSR-typechromosome CDS2413771 933 - 0.539121
yeaM Z2831 putative AraC-type regulatory proteinchromosome CDS2551563 822 - 0.5
yeaT Z2842 putative transcriptional regulator LYSR-typechromosome CDS2557693 945 - 0.520635
yebK Z2905 orf, hypothetical proteinchromosome CDS2613691 870 + 0.493103
yedL Z3022 orf, hypothetical proteinchromosome CDS2708333 480 + 0.46875
yedW Z3061 putative 2-component transcriptional regulatorchromosome CDS2737905 720 - 0.434722
yeeY Z3177 putative transcriptional regulator LYSR-typechromosome CDS2830049 951 - 0.507886
yegW Z3264 putative transcriptional regulatorchromosome CDS2925787 747 - 0.51004
yehT Z3302 orf, hypothetical proteinchromosome CDS2963466 735 - 0.49932
yehV Z3376 putative transcriptional regulatorchromosome CDS3015089 648 + 0.535494
yeiE Z3414 putative transcriptional regulator LYSR-typechromosome CDS3054984 882 - 0.536281
yeiI Z3417 putative kinasechromosome CDS3057947 1089 + 0.515152
yejH Z3443 putative ATP-dependent helicasechromosome CDS3086831 1761 + 0.530948
yfeD Z3663 orf, hypothetical proteinchromosome CDS3315441 393 + 0.468193
yfeG Z3702 putative ARAC-type regulatory proteinchromosome CDS3347067 1053 - 0.531814
yfeR_1 Z3674 putative transcriptional regulator LYSR-typechromosome CDS3320527 555 - 0.517117
yfeR_2 Z3673 putative transcriptional regulator LYSR-typechromosome CDS3320155 348 - 0.574713
yfeT Z3692 orf, hypothetical proteinchromosome CDS3337871 858 - 0.515152
yfhH Z3841 orf, hypothetical proteinchromosome CDS3488908 921 + 0.510315
yfiE Z3860 putative transcriptional regulator LYSR-typechromosome CDS3504475 927 - 0.486516
ygaA Z4017 putative 2-component transcriptional regulatorchromosome CDS3621996 1590 - 0.563522
ygaE Z3963 putative transcriptional regulatorchromosome CDS3585133 681 + 0.53304
ygcP Z4078 putative anti-terminator regulatory proteinchromosome CDS3681612 576 + 0.467014
ygeH Z4173 putative invasion proteinchromosome CDS3782034 1377 + 0.345679
ygeV Z4208 putative transcriptional regulatorchromosome CDS3809645 1779 - 0.458123
yggD Z4274 putative transcriptional regulatorchromosome CDS3882605 510 - 0.484314
ygiP Z4413 putative transcriptional regulator LYSR-typechromosome CDS4012169 933 - 0.494105
ygjM Z4435 orf, hypothetical proteinchromosome CDS4040574 417 - 0.479616
yhaJ Z4459 putative transcriptional regulator LYSR-typechromosome CDS4060163 897 - 0.550725
yhcI Z4580 putative NAGC-like transcriptional regulatorchromosome CDS4171939 909 - 0.584158
yhcK Z4584 putative FADA-type transcriptional regulatorchromosome CDS4176162 792 - 0.532828
yhcO Z4598 orf, hypothetical proteinchromosome CDS4188311 273 - 0.428571
yhdM Z4662 putative transcriptional regulatorchromosome CDS4240939 426 - 0.5
yhfR Z4736 putative transcriptional regulatorchromosome CDS4291124 798 + 0.505013
yhgF Z4762 orf, hypothetical proteinchromosome CDS4316900 2223 + 0.569951
yhhG Z4873 orf, hypothetical proteinchromosome CDS4420414 402 + 0.557214
yhhY Z4809 orf, hypothetical proteinchromosome CDS4367627 477 + 0.526205
yhiE Z4925 orf, hypothetical proteinchromosome CDS4467728 528 + 0.329545
yhiF Z4909 orf, hypothetical proteinchromosome CDS4455023 531 + 0.393597
yhiW Z4928 putative ARAC-type regulatory proteinchromosome CDS4473252 729 - 0.423868
yhiX Z4929 putative ARAC-type regulatory proteinchromosome CDS4474348 825 - 0.407273
yhjB Z4933 putative regulatorchromosome CDS4480656 603 - 0.477612
yhjC Z4934 putative transcriptional regulator LYSR-typechromosome CDS4481706 972 + 0.519547
yiaC Z4975 orf, hypothetical proteinchromosome CDS4528455 441 + 0.514739
yiaG Z4980 orf, hypothetical proteinchromosome CDS4534281 291 + 0.439863
yiaU Z5004 putative transcriptional regulator LYSR-typechromosome CDS4560554 975 + 0.472821
yidL Z5175 putative ARAC-type regulatory proteinchromosome CDS4719712 924 + 0.431818
yidP Z5179 putative transcriptional regulatorchromosome CDS4723866 717 + 0.520223
yidZ Z5206 putative transcriptional regulator LYSR-typechromosome CDS4750455 960 + 0.519792
yieP Z5258 chromosome CDS4803060 693 - 0.492063
yifA Z5275 putative transcriptional regulatorchromosome CDS4809553 597 - 0.477387
yihL Z5408 putative transcriptional regulatorchromosome CDS4925010 711 + 0.489451
yihW Z5422 putative DEOR-type transcriptional activatorchromosome CDS4939980 810 + 0.522222
yiiD Z5427 putative acetyltransferase (EC 2.3.1.18)chromosome CDS4942784 990 + 0.551515
yiiE Z5431 orf, hypothetical proteinchromosome CDS4946665 246 + 0.455285
yijC Z5524 orf, hypothetical proteinchromosome CDS5039098 705 + 0.520567
yijO Z5512 putative ARAC-type regulatory proteinchromosome CDS5023114 852 - 0.53169
yjaB Z5598 orf, hypothetical proteinchromosome CDS5090824 444 - 0.533784
yjaE Z5570 putative transcriptional regulatorchromosome CDS5073903 477 - 0.490566
yjdC Z5740 orf, hypothetical proteinchromosome CDS5247169 600 - 0.536667
yjdG Z5726 putative 2-component transcriptional regulatorchromosome CDS5233750 720 - 0.494444
yjeB Z5785 orf, hypothetical proteinchromosome CDS5289902 426 + 0.488263
yjfJ Z5789 putative alpha helical proteinchromosome CDS5294266 699 + 0.507868
yjfQ Z5800 putative DEOR-type transcriptional regulatorchromosome CDS5301411 756 - 0.505291
yjgJ Z5862 chromosome CDS5359986 255 + 0.490196
yjiE Z5926 putative transcriptional regulator LYSR-typechromosome CDS5442204 729 - 0.517147
yjiR Z5941 putative regulatorchromosome CDS5463295 1413 - 0.552725
yjjM Z5957 chromosome CDS5483290 807 - 0.468401
yjjQ Z5966 putative regulatorchromosome CDS5491831 726 + 0.447658
ykgA Z0376 putative AraC-like transcriptional regulatorchromosome CDS358308 891 - 0.434343
ykgD Z0382 putative ARAC-type regulatory proteinchromosome CDS362944 855 + 0.506433
ykgK Z0361 putative regulatorchromosome CDS343155 591 - 0.394247
ylcA Z0709 putative 2-component transcriptional regulatorchromosome CDS677202 684 - 0.548246
yneJ Z2177 putative transcriptional regulator LYSR-typechromosome CDS1948376 882 - 0.531746
ynfL Z2589 putative transcriptional regulator LYSR-typechromosome CDS2343786 894 - 0.525727
yphH Z3826 putative NAGC-like transcriptional regulatorchromosome CDS3473196 1200 + 0.506667
yqeH Z4166 orf, hypothetical proteinchromosome CDS3777176 693 + 0.369408
yqeI Z4167 putative sensory transducerchromosome CDS3778202 810 + 0.397531
yqgE Z4293 orf, hypothetical proteinchromosome CDS3901672 636 + 0.509434
yqhC Z4363 putative ARAC-type regulatory proteinchromosome CDS3961932 1128 - 0.5
yqjI Z4424 orf, hypothetical proteinchromosome CDS4023625 624 + 0.530449
yrbA Z4553 orf, hypothetical proteinchromosome CDS4146118 270 - 0.5
ytfH Z5823 orf, hypothetical proteinchromosome CDS5319483 471 + 0.522293