Gene list
Applied filters:
COG category: Transcription
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681
Number of genes found: 351
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| Colwellia psychrerythraea 34H, 34H; BAA-681 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CPS_0902 | acetyltransferase, GNAT family | chromosome | CDS | 903070 | 897 | + | 0.396878 |
| NA | CPS_0149 | leucine-rich repeat protein | chromosome | CDS | 158416 | 1311 | - | 0.384439 |
| NA | CPS_2483 | DNA-binding protein | chromosome | CDS | 2601743 | 597 | + | 0.417085 |
| NA | CPS_0816 | transcriptional regulator, LysR family | chromosome | CDS | 832573 | 870 | - | 0.396552 |
| NA | CPS_0290 | transcriptional regulator, TetR family | chromosome | CDS | 300872 | 747 | - | 0.384203 |
| NA | CPS_1670 | transcriptional regulator, LysR family | chromosome | CDS | 1718675 | 888 | + | 0.396396 |
| NA | CPS_3544 | glycine cleavage system transcriptional activator | chromosome | CDS | 3684077 | 933 | - | 0.407288 |
| NA | CPS_4936 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 5230400 | 900 | - | 0.384444 |
| NA | CPS_0269 | transcriptional regulator, AraC family | chromosome | CDS | 273875 | 996 | + | 0.394578 |
| NA | CPS_0729 | conserved hypothetical protein TIGR00244 | chromosome | CDS | 730921 | 498 | + | 0.389558 |
| NA | CPS_3819 | transcriptional regulator, AsnC family | chromosome | CDS | 3985801 | 468 | + | 0.356838 |
| NA | CPS_1296 | transcriptional regulator, LysR family | chromosome | CDS | 1337863 | 906 | + | 0.389625 |
| NA | CPS_0990 | transcriptional regulator, LysR family | chromosome | CDS | 1004273 | 900 | - | 0.383333 |
| NA | CPS_2560 | transcriptional regulator, AraC family | chromosome | CDS | 2662945 | 1035 | - | 0.390338 |
| NA | CPS_3398 | transcriptional regulator, araC family | chromosome | CDS | 3525979 | 822 | + | 0.395377 |
| NA | CPS_0677 | acetyltransferase, GNAT family | chromosome | CDS | 679566 | 609 | + | 0.402299 |
| NA | CPS_3229 | acetyltransferase, GNAT family | chromosome | CDS | 3357481 | 483 | - | 0.376812 |
| NA | CPS_2946 | SNF2 family protein | chromosome | CDS | 3086449 | 3075 | - | 0.354797 |
| NA | CPS_3420 | DNA-binding response regulator, LuxR family | chromosome | CDS | 3554199 | 651 | - | 0.379416 |
| NA | CPS_1769 | transcriptional regulator, LysR family | chromosome | CDS | 1813965 | 900 | - | 0.403333 |
| NA | CPS_4037 | DNA-binding protein | chromosome | CDS | 4245425 | 600 | + | 0.421667 |
| NA | CPS_4788 | transcriptional regulator, AraC family | chromosome | CDS | 5069311 | 1035 | - | 0.38744 |
| NA | CPS_2816 | putative RNA polymerase sigma-70 factor FecI | chromosome | CDS | 2947326 | 579 | + | 0.348877 |
| NA | CPS_1794 | protein kinase domain protein | chromosome | CDS | 1835804 | 684 | + | 0.353801 |
| NA | CPS_2786 | response regulator | chromosome | CDS | 2907887 | 732 | - | 0.39071 |
| NA | CPS_1865 | DNA-binding response regulator | chromosome | CDS | 1915091 | 672 | + | 0.363095 |
| NA | CPS_1365 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 1407420 | 804 | + | 0.379353 |
| NA | CPS_0840 | transcriptional regulator, AraC family | chromosome | CDS | 854677 | 993 | - | 0.379658 |
| NA | CPS_1590 | ATP-dependent RNA helicase, DEAD box family | chromosome | CDS | 1635005 | 1368 | + | 0.383772 |
| NA | CPS_0974 | putative sugar-binding protein | chromosome | CDS | 978791 | 1023 | + | 0.407625 |
| NA | CPS_1932 | DNA-binding response regulator | chromosome | CDS | 1991374 | 660 | + | 0.368182 |
| NA | CPS_3271 | DNA-binding response regulator | chromosome | CDS | 3401665 | 645 | - | 0.381395 |
| NA | CPS_4359 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 4591260 | 954 | + | 0.363732 |
| NA | CPS_4666 | transcriptional regulator, LysR family | chromosome | CDS | 4931572 | 924 | + | 0.361472 |
| NA | CPS_1457 | transcriptional regulator, LysR family | chromosome | CDS | 1500522 | 903 | + | 0.366556 |
| NA | CPS_3937 | conserved hypothetical protein | chromosome | CDS | 4121053 | 669 | + | 0.393124 |
| NA | CPS_3602 | transcriptional regulator, araC family | chromosome | CDS | 3739409 | 807 | + | 0.379182 |
| NA | CPS_1915 | transcriptional regulator, MerR family | chromosome | CDS | 1973387 | 411 | - | 0.411192 |
| NA | CPS_3977 | transcriptional regulator, LysR family | chromosome | CDS | 4171460 | 972 | - | 0.391975 |
| NA | CPS_0918 | DNA-binding protein | chromosome | CDS | 922561 | 219 | + | 0.360731 |
| NA | CPS_1236 | transcriptional regulator, ArsR family | chromosome | CDS | 1271596 | 306 | - | 0.372549 |
| NA | CPS_0380 | acetyltransferase, GNAT family | chromosome | CDS | 381185 | 456 | - | 0.364035 |
| NA | CPS_2376 | transcription regulator, LacI family | chromosome | CDS | 2479359 | 1020 | + | 0.368627 |
| NA | CPS_0531 | transcriptional regulator, LysR family | chromosome | CDS | 529237 | 873 | - | 0.366552 |
| NA | CPS_2555 | acetyltransferase, GNAT family | chromosome | CDS | 2657960 | 435 | + | 0.372414 |
| NA | CPS_2055 | transcriptional regulator, LysR family | chromosome | CDS | 2134757 | 909 | + | 0.347635 |
| NA | CPS_0681 | DNA-binding response regulator | chromosome | CDS | 683429 | 741 | - | 0.39946 |
| NA | CPS_1663 | DNA-binding protein | chromosome | CDS | 1712271 | 558 | + | 0.379928 |
| NA | CPS_4694 | transcriptional regulator, AraC family | chromosome | CDS | 4965819 | 819 | + | 0.39072 |
| NA | CPS_4160 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 4370153 | 888 | + | 0.361486 |
| NA | CPS_0394 | response regulator/GGDEF/EAL domain protein | chromosome | CDS | 399266 | 2223 | - | 0.365272 |
| NA | CPS_3404 | Snf2 family protein | chromosome | CDS | 3530914 | 3405 | + | 0.380323 |
| NA | CPS_1252 | conserved hypothetical protein | chromosome | CDS | 1282974 | 705 | - | 0.405674 |
| NA | CPS_1260 | putative nitrate/nitrite DNA-binding response regulator | chromosome | CDS | 1292246 | 621 | - | 0.388084 |
| NA | CPS_4898 | acetyltransferase, GNAT family | chromosome | CDS | 5191354 | 822 | + | 0.394161 |
| NA | CPS_2280 | transcriptional regulator, RpiR family | chromosome | CDS | 2379010 | 849 | - | 0.38987 |
| NA | CPS_4691 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 4962351 | 903 | + | 0.386489 |
| NA | CPS_1780 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 1822889 | 921 | + | 0.441911 |
| NA | CPS_4279 | transcriptional regulator, LysR family | chromosome | CDS | 4512368 | 939 | - | 0.389776 |
| NA | CPS_0143 | putative transcriptional regulator | chromosome | CDS | 150647 | 339 | - | 0.374631 |
| NA | CPS_1358 | transcriptional regulator, TetR family | chromosome | CDS | 1400933 | 609 | + | 0.377668 |
| NA | CPS_0801 | transcriptional regulator, LysR family | chromosome | CDS | 818335 | 897 | - | 0.370123 |
| NA | CPS_2453 | transcriptional regulator, ArsR family | chromosome | CDS | 2571949 | 291 | + | 0.391753 |
| NA | CPS_0737 | cold-shock DNA-binding domain family protein | chromosome | CDS | 737654 | 210 | - | 0.395238 |
| NA | CPS_1819 | LytTr DNA-binding response regulator | chromosome | CDS | 1868979 | 783 | - | 0.380587 |
| NA | CPS_3959 | RNA polymerase sigma factor, sigma-70 family | chromosome | CDS | 4146285 | 558 | - | 0.379928 |
| NA | CPS_3886 | ATP-dependent helicase | chromosome | CDS | 4058349 | 1944 | - | 0.40535 |
| NA | CPS_1656 | 4-hydroxybutyrate coenzyme A transferase, putative/acetyltransferase, GNAT family | chromosome | CDS | 1705206 | 1869 | - | 0.393258 |
| NA | CPS_2652 | transcriptional regulator, LacI family | chromosome | CDS | 2759620 | 1008 | + | 0.378968 |
| NA | CPS_4752 | phage shock domain protein | chromosome | CDS | 5029824 | 231 | + | 0.385281 |
| NA | CPS_2017 | conserved hypothetical protein | chromosome | CDS | 2090244 | 261 | + | 0.390805 |
| NA | CPS_0890 | hypothetical protein | chromosome | CDS | 896199 | 399 | + | 0.283208 |
| NA | CPS_4612 | aminotransferase/transcriptional regulator, GntR family | chromosome | CDS | 4868456 | 1443 | - | 0.424116 |
| NA | CPS_1433 | transcriptional regulator, IclR family | chromosome | CDS | 1471225 | 768 | + | 0.416667 |
| NA | CPS_1854 | DNA-binding response regulator | chromosome | CDS | 1904304 | 672 | - | 0.38244 |
| NA | CPS_2448 | transcription regulator, TetR family | chromosome | CDS | 2567674 | 615 | - | 0.369106 |
| NA | CPS_3670 | protein kinase domain protein | chromosome | CDS | 3812919 | 2346 | + | 0.368286 |
| NA | CPS_1895 | acetyltransferase, GNAT family | chromosome | CDS | 1955800 | 474 | + | 0.337553 |
| NA | CPS_0995 | transcriptional regulator, LysR family | chromosome | CDS | 1012783 | 942 | + | 0.388535 |
| NA | CPS_1681 | transcriptional regulator, TetR family | chromosome | CDS | 1726132 | 597 | + | 0.366834 |
| NA | CPS_0335 | transcriptional regulator, TetR family | chromosome | CDS | 347503 | 633 | + | 0.393365 |
| NA | CPS_4224 | putative heme biosynthesis protein | chromosome | CDS | 4448035 | 1119 | + | 0.407507 |
| NA | CPS_1015 | DNA-binding response regulator | chromosome | CDS | 1036991 | 771 | + | 0.367056 |
| NA | CPS_1231 | transcriptional regulator, LysR family | chromosome | CDS | 1262869 | 948 | - | 0.392405 |
| NA | CPS_0937 | DNA-binding response regulator, LuxR family | chromosome | CDS | 943259 | 672 | + | 0.395833 |
| NA | CPS_1586 | transcriptional regulator, TetR family | chromosome | CDS | 1633737 | 648 | + | 0.375 |
| NA | CPS_1604 | transcriptional regulator, MerR family | chromosome | CDS | 1651479 | 399 | - | 0.348371 |
| NA | CPS_2971 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 3109417 | 885 | - | 0.345763 |
| NA | CPS_1907 | transcriptional regulator, LysR family | chromosome | CDS | 1966959 | 474 | + | 0.417722 |
| NA | CPS_4919 | transcriptional regulator, AsnC family | chromosome | CDS | 5209974 | 498 | + | 0.409639 |
| NA | CPS_0999 | serine/threonine protein kinase domain protein | chromosome | CDS | 1019397 | 2691 | + | 0.371981 |
| NA | CPS_2850 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 2980640 | 873 | - | 0.396334 |
| NA | CPS_0214 | transcriptional regulator, TetR family | chromosome | CDS | 220974 | 657 | + | 0.350076 |
| NA | CPS_3604 | transcriptional regulator, LysR family | chromosome | CDS | 3742406 | 972 | + | 0.416667 |
| NA | CPS_2176 | hypothetical protein | chromosome | CDS | 2277336 | 597 | - | 0.329983 |
| NA | CPS_3241 | response regulator | chromosome | CDS | 3371476 | 1287 | - | 0.359751 |
| NA | CPS_3172 | DNA-binding response regulator | chromosome | CDS | 3304710 | 717 | - | 0.383543 |
| NA | CPS_4529 | cold-shock DNA-binding domain family protein | chromosome | CDS | 4784115 | 207 | + | 0.386473 |
| NA | CPS_3600 | transcriptional regulator, LysR family | chromosome | CDS | 3736973 | 924 | + | 0.390693 |
| NA | CPS_1377 | RNA polymerase sigma factor, sigma-70 family | chromosome | CDS | 1418223 | 618 | + | 0.383495 |
| NA | CPS_1945 | conserved hypothetical protein | chromosome | CDS | 2009323 | 492 | + | 0.357724 |
| NA | CPS_1244 | transcriptional regulator, LysR family | chromosome | CDS | 1275785 | 882 | + | 0.393424 |
| NA | CPS_0119 | transcriptional regulator, AsnC family | chromosome | CDS | 125095 | 429 | - | 0.384615 |
| NA | CPS_3086 | transcriptional regulator, LysR family | chromosome | CDS | 3217779 | 870 | - | 0.349425 |
| NA | CPS_0804 | transcriptional regulator, MarR family | chromosome | CDS | 820760 | 423 | + | 0.390071 |
| NA | CPS_3065 | DNA-binding response regulator | chromosome | CDS | 3199505 | 714 | + | 0.338936 |
| NA | CPS_2387 | DNA-binding response regulator | chromosome | CDS | 2501155 | 711 | + | 0.37834 |
| NA | CPS_0815 | transcriptional regulator, AraC family | chromosome | CDS | 831656 | 828 | + | 0.400966 |
| NA | CPS_1672 | transcriptional regulator, LysR family | chromosome | CDS | 1720905 | 897 | - | 0.365663 |
| NA | CPS_1346 | transcriptional regulator, LysR family | chromosome | CDS | 1383849 | 909 | + | 0.371837 |
| NA | CPS_2005 | transcriptional regulator, MarR family | chromosome | CDS | 2076582 | 432 | - | 0.358796 |
| NA | CPS_4902 | conserved hypothetical protein | chromosome | CDS | 5193456 | 255 | - | 0.356863 |
| NA | CPS_3374 | putative helicase | chromosome | CDS | 3503664 | 3054 | + | 0.389653 |
| NA | CPS_1396 | transcriptional regulator, TetR family | chromosome | CDS | 1436742 | 582 | - | 0.352234 |
| NA | CPS_0662 | transcriptional regulator, AraC family | chromosome | CDS | 662686 | 1020 | - | 0.388235 |
| NA | CPS_0179 | DNA-binding response regulator, LuxR family | chromosome | CDS | 188462 | 660 | - | 0.377273 |
| NA | CPS_2948 | conserved hypothetical protein | chromosome | CDS | 3090702 | 186 | - | 0.306452 |
| NA | CPS_1337 | transcriptional regulator, MarR family | chromosome | CDS | 1374712 | 477 | + | 0.425577 |
| NA | CPS_4166 | response regulator | chromosome | CDS | 4380332 | 1527 | + | 0.35036 |
| NA | CPS_3590 | transcriptional regulator, IclR family | chromosome | CDS | 3727098 | 804 | - | 0.424129 |
| NA | CPS_1920 | sigma-54 dependent transcriptional regulator | chromosome | CDS | 1977972 | 1539 | + | 0.410006 |
| NA | CPS_4261 | DNA-binding response regulator | chromosome | CDS | 4492724 | 702 | + | 0.390313 |
| NA | CPS_5044 | parB family protein | chromosome | CDS | 5362806 | 903 | - | 0.379845 |
| NA | CPS_4891 | transcriptional regulator, IclR family | chromosome | CDS | 5185519 | 789 | + | 0.404309 |
| NA | CPS_0770 | transcriptional regulator, LysR family | chromosome | CDS | 788473 | 903 | - | 0.380952 |
| NA | CPS_3718 | response regulator | chromosome | CDS | 3874465 | 828 | - | 0.365942 |
| NA | CPS_4943 | transcriptional regulator, DeoR family | chromosome | CDS | 5238315 | 765 | - | 0.407843 |
| NA | CPS_2434 | hypothetical protein | chromosome | CDS | 2558514 | 312 | + | 0.365385 |
| NA | CPS_2264 | transcriptional regulator, TetR family | chromosome | CDS | 2359257 | 693 | - | 0.347763 |
| NA | CPS_0370 | putative transcriptional regulator | chromosome | CDS | 374380 | 633 | + | 0.364929 |
| NA | CPS_2521 | transcriptional regulator, LysR family | chromosome | CDS | 2624746 | 912 | + | 0.379386 |
| NA | CPS_0978 | transcription regulator, LacI family | chromosome | CDS | 985269 | 1020 | + | 0.388235 |
| NA | CPS_1019 | transcriptional regulator, LacI family | chromosome | CDS | 1039788 | 1023 | - | 0.379277 |
| NA | CPS_0851 | sigma 54-dependent transcriptional regulator | chromosome | CDS | 866544 | 1584 | + | 0.425505 |
| NA | CPS_1131 | Rrf2 family protein | chromosome | CDS | 1153622 | 507 | + | 0.402367 |
| NA | CPS_4921 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 5212076 | 876 | + | 0.378995 |
| NA | CPS_4909 | substrate-binding transcriptional regulator, AraC family | chromosome | CDS | 5197982 | 819 | + | 0.394383 |
| NA | CPS_3215 | putative ATP-dependent RNA helicase SrmB | chromosome | CDS | 3347779 | 1347 | - | 0.370453 |
| NA | CPS_0171 | transcriptional regulator, TetR family | chromosome | CDS | 180462 | 570 | + | 0.361403 |
| NA | CPS_4531 | BolA/YrbA family protein | chromosome | CDS | 4786109 | 264 | - | 0.356061 |
| NA | CPS_3935 | transcriptional regulator, GntR family | chromosome | CDS | 4118826 | 1512 | - | 0.414021 |
| NA | CPS_0831 | transcriptional regulator, LysR family | chromosome | CDS | 843350 | 891 | + | 0.433221 |
| NA | CPS_4225 | putative heme biosynthesis protein | chromosome | CDS | 4449146 | 513 | + | 0.403509 |
| NA | CPS_1392 | transcriptional regulator, LysR family | chromosome | CDS | 1432416 | 936 | + | 0.389957 |
| NA | CPS_1159 | DNA-binding protein | chromosome | CDS | 1181089 | 204 | - | 0.343137 |
| NA | CPS_3383 | transcriptional regulator, TetR family | chromosome | CDS | 3516437 | 594 | - | 0.407407 |
| NA | CPS_4021 | transcriptional regulator, AraC family | chromosome | CDS | 4223901 | 1062 | - | 0.392655 |
| NA | CPS_2187 | acetyltransferase, GNAT family | chromosome | CDS | 2283573 | 468 | + | 0.386752 |
| NA | CPS_4905 | putative transcriptional regulator | chromosome | CDS | 5195021 | 555 | + | 0.376577 |
| NA | CPS_4007 | transcriptional regulator, MarR family | chromosome | CDS | 4205344 | 447 | - | 0.391499 |
| NA | CPS_0651 | DNA-binding response regulator | chromosome | CDS | 649884 | 783 | - | 0.369093 |
| NA | CPS_3982 | DNA-binding response regulator | chromosome | CDS | 4178133 | 717 | - | 0.384937 |
| NA | CPS_3138 | transcriptional regulator, MerR family | chromosome | CDS | 3271169 | 354 | + | 0.358757 |
| NA | CPS_4191 | PspA/IM30 family protein | chromosome | CDS | 4412758 | 690 | + | 0.388406 |
| NA | CPS_4364 | RNA polymerase sigma-70 factor, ECF subfamily | chromosome | CDS | 4596120 | 654 | - | 0.399083 |
| NA | CPS_2718 | transcriptional regulator, AraC family | chromosome | CDS | 2836221 | 996 | - | 0.396586 |
| NA | CPS_2929 | acetyltransferase, GNAT family | chromosome | CDS | 3063749 | 402 | - | 0.310945 |
| NA | CPS_4423 | acetyltransferase, GNAT family | chromosome | CDS | 4664586 | 528 | - | 0.361742 |
| NA | CPS_4876 | transcriptional regulator, TetR family | chromosome | CDS | 5172042 | 627 | + | 0.362041 |
| NA | CPS_1640 | acetyltransferase, GNAT family | chromosome | CDS | 1690843 | 453 | + | 0.384106 |
| NA | CPS_2033 | DNA-binding response regulator, LuxR family | chromosome | CDS | 2105571 | 627 | + | 0.409888 |
| NA | CPS_3165 | RNA polymerase sigma-70 factor, ECF subfamily | chromosome | CDS | 3297666 | 516 | + | 0.389535 |
| NA | CPS_4679 | putative transcriptional regulator | chromosome | CDS | 4947538 | 543 | + | 0.379374 |
| NA | CPS_3836 | conserved hypothetical protein | chromosome | CDS | 4001122 | 546 | + | 0.40293 |
| NA | CPS_2855 | substrate-binding transcriptional regulator, araC family | chromosome | CDS | 2984759 | 843 | - | 0.396204 |
| NA | CPS_1805 | conserved hypothetical protein | chromosome | CDS | 1857058 | 594 | - | 0.378788 |
| NA | CPS_4226 | putative heme biosythesis protein | chromosome | CDS | 4449748 | 552 | + | 0.380435 |
| NA | CPS_0449 | transcriptional regulator, GntR family | chromosome | CDS | 447238 | 360 | + | 0.416667 |
| NA | CPS_4924 | response regulator | chromosome | CDS | 5214429 | 357 | - | 0.338936 |
| NA | CPS_1965 | transcriptional regulator, TetR family | chromosome | CDS | 2033700 | 633 | - | 0.374408 |
| NA | CPS_0421 | transcription regulator, LysR family | chromosome | CDS | 426821 | 876 | - | 0.364155 |
| NA | CPS_0389 | transcriptional regulator, LuxR family | chromosome | CDS | 391544 | 825 | + | 0.339394 |
| NA | CPS_1305 | transcriptional regulator, TetR family | chromosome | CDS | 1345640 | 546 | - | 0.384615 |
| NA | CPS_0987 | transcriptional regulator, TetR family | chromosome | CDS | 1001107 | 588 | - | 0.389456 |
| NA | CPS_1908 | transcriptional regulator, LysR family | chromosome | CDS | 1967602 | 879 | - | 0.418658 |
| NA | CPS_4408 | proline-responsive regulatory protein | chromosome | CDS | 4642621 | 477 | - | 0.345912 |
| NA | CPS_0420 | transcriptional regulator, LysR family | chromosome | CDS | 425699 | 930 | - | 0.378495 |
| NA | CPS_1294 | hypothetical protein | chromosome | CDS | 1335707 | 930 | - | 0.377419 |
| NA | CPS_2577 | transcriptional regulator, AraC family | chromosome | CDS | 2682708 | 1035 | + | 0.352657 |
| NA | CPS_3401 | ATP-dependent RNA helicase, DEAD box family | chromosome | CDS | 3528626 | 1299 | - | 0.425712 |
| NA | CPS_0823 | transcriptional regulator | chromosome | CDS | 838190 | 345 | + | 0.350725 |
| NA | CPS_2866 | conserved domain protein | chromosome | CDS | 2995001 | 843 | - | 0.342823 |
| NA | CPS_4314 | acetyltransferase, GNAT family | chromosome | CDS | 4541746 | 513 | + | 0.34308 |
| NA | CPS_2531 | transcriptional regulator, LysR family | chromosome | CDS | 2635616 | 906 | - | 0.417219 |
| NA | CPS_0853 | putative glycine cleavage operon activator | chromosome | CDS | 868844 | 894 | - | 0.39038 |
| NA | CPS_0632 | conserved hypothetical protein | chromosome | CDS | 629147 | 345 | - | 0.362319 |
| NA | CPS_1618 | putative DNA-binding protein | chromosome | CDS | 1666447 | 255 | + | 0.345098 |
| NA | CPS_1707 | putative protein kinase | chromosome | CDS | 1752024 | 1836 | + | 0.398148 |
| NA | CPS_4382 | putative transcriptional regulator | chromosome | CDS | 4617639 | 381 | + | 0.391076 |
| NA | CPS_2524 | DNA-binding response regulator | chromosome | CDS | 2628646 | 723 | - | 0.366528 |
| NA | CPS_0794 | RNA polymerase sigma factor, sigma-70 family | chromosome | CDS | 812543 | 687 | + | 0.352256 |
| NA | CPS_2823 | transcriptional regulator, GntR family | chromosome | CDS | 2958694 | 720 | - | 0.384722 |
| NA | CPS_2674 | transcriptional regulator, LysR family | chromosome | CDS | 2786222 | 885 | + | 0.383051 |
| NA | CPS_4965 | putative transcription accessory protein | chromosome | CDS | 5273437 | 2391 | - | 0.398996 |
| NA | CPS_1282 | transcriptional regulator, LysR family | chromosome | CDS | 1320261 | 921 | + | 0.368078 |
| NA | CPS_0718 | cold-shock DNA-binding domain family protein | chromosome | CDS | 720124 | 207 | + | 0.386473 |
| NA | CPS_0181 | transcriptional regulator, TetR family | chromosome | CDS | 191621 | 597 | - | 0.400335 |
| NA | CPS_3107 | transcriptional regulator, LysR family | chromosome | CDS | 3251608 | 900 | - | 0.384444 |
| NA | CPS_3033 | transcriptional regulator, LysR family | chromosome | CDS | 3171882 | 939 | + | 0.370607 |
| NA | CPS_0962 | RNA polymerase sigma-70 factor, ECF subfamily | chromosome | CDS | 969211 | 534 | + | 0.365169 |
| NA | CPS_2473 | DNA-binding response regulator | chromosome | CDS | 2588125 | 729 | + | 0.411523 |
| NA | CPS_2540 | acetyltransferase, GNAT family | chromosome | CDS | 2647102 | 498 | + | 0.39759 |
| NA | CPS_0091 | conserved hypothetical protein | chromosome | CDS | 96139 | 618 | + | 0.394822 |
| NA | CPS_3320 | transcriptional regulator, LysR family | chromosome | CDS | 3443356 | 951 | + | 0.390116 |
| NA | CPS_1955 | transcriptional regulator, MerR family | chromosome | CDS | 2018223 | 387 | - | 0.348837 |
| NA | CPS_4142 | transcriptional regulator, GntR family | chromosome | CDS | 4358112 | 669 | - | 0.393124 |
| NA | CPS_0725 | RNA polymerase sigma factor, sigma-70 family | chromosome | CDS | 727671 | 543 | + | 0.406998 |
| NA | CPS_2487 | acetyltransferase, GNAT family | chromosome | CDS | 2605564 | 483 | + | 0.385093 |
| NA | CPS_2658 | ATP-dependent RNA helicase, DEAD box family | chromosome | CDS | 2770110 | 1200 | + | 0.376667 |
| NA | CPS_0659 | transcriptional regulator, AraC family | chromosome | CDS | 658291 | 873 | + | 0.403207 |
| NA | CPS_3286 | DNA-binding protein | chromosome | CDS | 3412608 | 540 | - | 0.409259 |
| NA | CPS_0924 | conserved hypothetical protein | chromosome | CDS | 928567 | 486 | - | 0.434156 |
| NA | CPS_4901 | transcriptional regulator, AraC family | chromosome | CDS | 5192513 | 894 | + | 0.389262 |
| NA | CPS_3991 | transcriptional regulator, AraC family | chromosome | CDS | 4186917 | 1062 | + | 0.38983 |
| NA | CPS_4264 | transcription regulator, AsnC family | chromosome | CDS | 4496079 | 459 | + | 0.400871 |
| NA | CPS_3129 | acetyltransferase, GNAT family | chromosome | CDS | 3265400 | 423 | + | 0.35461 |
| NA | CPS_1804 | protein kinase domain protein | chromosome | CDS | 1856341 | 714 | - | 0.358543 |
| NA | CPS_0747 | transcriptional regulator, TetR family | chromosome | CDS | 751338 | 621 | + | 0.380032 |
| NA | CPS_2179 | acetyltransferase, GNAT family | chromosome | CDS | 2278789 | 456 | - | 0.302632 |
| NA | CPS_2278 | LytTr DNA-binding response regulator | chromosome | CDS | 2376515 | 843 | + | 0.344009 |
| NA | CPS_2748 | transcriptional regulator, araC family | chromosome | CDS | 2862824 | 828 | + | 0.396135 |
| NA | CPS_4949 | serine/threonine protein kinase | chromosome | CDS | 5249999 | 1833 | - | 0.403164 |
| NA | CPS_1617 | transcriptional regulator, araC family | chromosome | CDS | 1664999 | 915 | + | 0.372678 |
| NA | CPS_4744 | putative transcriptional activator | chromosome | CDS | 5022824 | 750 | - | 0.398667 |
| NA | CPS_3711 | transcriptional regulator, AraC family | chromosome | CDS | 3862335 | 918 | - | 0.347495 |
| NA | CPS_4164 | response regulator/phosphatase | chromosome | CDS | 4374025 | 1059 | - | 0.383381 |
| NA | CPS_4662 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 4926167 | 882 | + | 0.387755 |
| NA | CPS_1434 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 1472012 | 927 | - | 0.395901 |
| NA | CPS_0798 | transcription regulator, LysR family | chromosome | CDS | 816096 | 900 | - | 0.413333 |
| NA | CPS_4749 | transcriptional regulator, TetR family | chromosome | CDS | 5027666 | 624 | - | 0.375 |
| NA | CPS_2489 | acetyltransferase, GNAT family | chromosome | CDS | 2606853 | 426 | + | 0.370892 |
| NA | CPS_3610 | transcriptional regulator, LysR family | chromosome | CDS | 3746619 | 909 | - | 0.429043 |
| NA | CPS_1406 | DNA-binding response regulator | chromosome | CDS | 1445821 | 648 | + | 0.37037 |
| NA | CPS_3400 | conserved hypothetical protein | chromosome | CDS | 3527842 | 681 | + | 0.400881 |
| NA | CPS_3075 | transcriptional regulator, araC family | chromosome | CDS | 3205791 | 954 | + | 0.381551 |
| NA | CPS_4062 | transcriptional regulator, TetR family | chromosome | CDS | 4274258 | 657 | - | 0.43379 |
| NA | CPS_1410 | transcriptional regulator, TetR family | chromosome | CDS | 1452037 | 585 | + | 0.382906 |
| NA | CPS_3843 | DNA-binding protein | chromosome | CDS | 4010426 | 630 | - | 0.434921 |
| NA | CPS_4383 | TonB domain/peptidase M56 domain protein | chromosome | CDS | 4618038 | 2103 | + | 0.383738 |
| NA | CPS_4053 | substrate binding transcriptional regulator, LysR family | chromosome | CDS | 4263652 | 936 | - | 0.479701 |
| NA | CPS_0934 | transcriptional regulator, LysR family | chromosome | CDS | 938739 | 897 | + | 0.408027 |
| NA | CPS_0274 | sigma-54 dependent transcriptional regulator/sensory box protein | chromosome | CDS | 277531 | 1425 | - | 0.401404 |
| NA | CPS_2396 | hypothetical protein | chromosome | CDS | 2512698 | 807 | + | 0.465923 |
| NA | CPS_1319 | transcriptional regulator | chromosome | CDS | 1359027 | 357 | - | 0.408964 |
| NA | CPS_2665 | DNA-binding protein | chromosome | CDS | 2777508 | 363 | - | 0.391185 |
| NA | CPS_4819 | DNA-binding response regulator | chromosome | CDS | 5112492 | 561 | + | 0.404635 |
| NA | CPS_4699 | substrate-binding transcriptional regulator, LysR family | chromosome | CDS | 4972703 | 891 | + | 0.391695 |
| NA | CPS_1651 | transcriptional regulator, TetR family | chromosome | CDS | 1698716 | 768 | + | 0.355469 |
| NA | CPS_4154 | transcriptional regulator, AraC family | chromosome | CDS | 4366288 | 927 | + | 0.337648 |
| NA | CPS_1317 | transcriptional regulator, LysR family | chromosome | CDS | 1356861 | 957 | - | 0.414838 |
| NA | CPS_2084 | transcriptional regulator, LuxR family | chromosome | CDS | 2166269 | 810 | + | 0.354321 |
| NA | CPS_3596 | putative transcriptional regulator | chromosome | CDS | 3733744 | 339 | - | 0.389381 |
| NA | CPS_3421 | transcriptional regulator, LysR family | chromosome | CDS | 3555074 | 918 | - | 0.367102 |
| NA | CPS_4004 | transcriptional regulator, TetR family | chromosome | CDS | 4202066 | 591 | + | 0.390863 |
| NA | CPS_3431 | transcriptional regulator, AraC family | chromosome | CDS | 3569450 | 1026 | - | 0.346004 |
| NA | CPS_3941 | transcriptional regulator, LysR family | chromosome | CDS | 4126067 | 900 | + | 0.401111 |
| NA | CPS_4885 | acetyltransferase, GNAT family | chromosome | CDS | 5180747 | 426 | - | 0.415493 |
| NA | CPS_1302 | putative helicase | chromosome | CDS | 1342562 | 1551 | + | 0.4049 |
| NA | CPS_3214 | putative transcriptional regulator | chromosome | CDS | 3346698 | 810 | + | 0.322222 |
| NA | CPS_1706 | sigma-54 dependent transcriptional regulator | chromosome | CDS | 1750268 | 1599 | + | 0.382114 |
| NA | CPS_0291 | acetyltransferase, GNAT family | chromosome | CDS | 301768 | 459 | - | 0.40305 |
| NA | CPS_1418 | ATP-dependent RNA helicase, DEAD box family | chromosome | CDS | 1457739 | 1206 | + | 0.397181 |
| NA | CPS_2699 | transcription regulator, LysR family | chromosome | CDS | 2815718 | 891 | + | 0.37486 |
| NA | CPS_3331 | transcriptional regulator, MarR family | chromosome | CDS | 3451244 | 468 | + | 0.378205 |
| NA | CPS_3863 | transcriptional regulator, LysR family | chromosome | CDS | 4031005 | 924 | + | 0.399351 |
| NA | CPS_0717 | putative transcription termination factor Rho | chromosome | CDS | 718725 | 945 | + | 0.444444 |
| NA | CPS_3341 | transcriptional regulator, TetR family | chromosome | CDS | 3466354 | 633 | - | 0.382306 |
| NA | CPS_3497 | transcriptional regulator, LysR family | chromosome | CDS | 3633571 | 930 | + | 0.422581 |
| NA | CPS_4655 | transcriptional regulator, AraC family | chromosome | CDS | 4917665 | 876 | + | 0.341324 |
| NA | CPS_2504 | acetyltransferase, GNAT family | chromosome | CDS | 2615199 | 414 | + | 0.342995 |
| NA | CPS_3393 | putative aminotransferase | chromosome | CDS | 3522133 | 1503 | + | 0.399867 |
| NA | CPS_0042 | ATP-dependent RNA helicase, DEAD box family | chromosome | CDS | 42397 | 1263 | + | 0.372922 |
| NA | CPS_0100 | transcriptional regulator, LysR family | chromosome | CDS | 107752 | 921 | + | 0.409338 |
| NA | CPS_1394 | putative leucine-responsive regulatory protein | chromosome | CDS | 1435065 | 468 | - | 0.378205 |
| NA | CPS_2982 | transcriptional regulator, AraC family | chromosome | CDS | 3121061 | 984 | - | 0.372967 |
| NA | CPS_4850 | RNA polymerase sigma factor, sigma-70 family | chromosome | CDS | 5142207 | 666 | - | 0.378378 |
| NA | CPS_0243 | putative RNA polymerase sigma-70 factor FecI | chromosome | CDS | 248046 | 570 | + | 0.375439 |
| NA | CPS_3852 | RNA polymerase sigma factor, sigma-70 family | chromosome | CDS | 4020443 | 570 | - | 0.380702 |
| NA | CPS_2714 | DNA-binding response regulator | chromosome | CDS | 2831066 | 687 | - | 0.346434 |
| NA | CPS_3443 | transcriptional regulator, LuxR family | chromosome | CDS | 3581135 | 465 | - | 0.404301 |
| NA | CPS_2605 | transcriptional regulator, LysR family | chromosome | CDS | 2706289 | 795 | + | 0.396226 |
| NA | CPS_1641 | DNA-binding protein | chromosome | CDS | 1691493 | 414 | + | 0.321256 |
| NA | CPS_1125 | ATP-dependent RNA helicase, DEAD box family | chromosome | CDS | 1147766 | 1401 | + | 0.401856 |
| NA | CPS_0697 | putative arginine repressor | chromosome | CDS | 703624 | 483 | + | 0.391304 |
| NA | CPS_2510 | transcriptional regulator, TetR family | chromosome | CDS | 2618366 | 546 | - | 0.375458 |
| NA | CPS_3945 | transcription regulator, LysR family | chromosome | CDS | 4129245 | 912 | + | 0.364035 |
| NA | CPS_2950 | conserved hypothetical protein | chromosome | CDS | 3091771 | 312 | - | 0.342949 |
| NA | CPS_2371 | transcription regulator, LacI family | chromosome | CDS | 2473076 | 1014 | - | 0.372781 |
| acoR | CPS_3048 | acetoin catabolism regulatory protein | chromosome | CDS | 3183913 | 1977 | - | 0.379363 |
| arcA | CPS_4496 | aerobic respiration control protein ArcA | chromosome | CDS | 4741697 | 702 | + | 0.381766 |
| argR | CPS_4515 | arginine repressor | chromosome | CDS | 4762646 | 474 | + | 0.383966 |
| baeR | CPS_3305 | DNA-binding response regulator BaeR | chromosome | CDS | 3428149 | 699 | + | 0.386266 |
| betI1 | CPS_1332 | transcriptional regulator BetI | chromosome | CDS | 1368609 | 591 | + | 0.42132 |
| betI2 | CPS_4012 | transcriptional regulator BetI | chromosome | CDS | 4211164 | 606 | - | 0.394389 |
| cpxR | CPS_1750 | transcriptional regulatory protein CpxR | chromosome | CDS | 1795596 | 729 | - | 0.37037 |
| cspD | CPS_2895 | cold shock-like protein CspD | chromosome | CDS | 3028752 | 219 | + | 0.401826 |
| cysB | CPS_1200 | cys regulon transcription activator | chromosome | CDS | 1232099 | 975 | + | 0.386667 |
| dbpA | CPS_1540 | ATP-dependent RNA helicase DbpA | chromosome | CDS | 1582295 | 1407 | + | 0.398721 |
| deaD | CPS_1726 | RNA helicase DeaD | chromosome | CDS | 1775322 | 1836 | + | 0.406318 |
| dinG | CPS_2272 | ATP-dependent helicase DinG | chromosome | CDS | 2367295 | 2139 | - | 0.387097 |
| dsdC | CPS_4658 | D-serine deaminase activator | chromosome | CDS | 4920634 | 960 | - | 0.371875 |
| fadR | CPS_3488 | fatty acid metabolism regulator protein | chromosome | CDS | 3627416 | 714 | - | 0.345938 |
| fis | CPS_0551 | DNA-binding protein Fis | chromosome | CDS | 549047 | 288 | + | 0.385417 |
| flgM | CPS_1472 | negative regulator of flagellin synthesis FlgM | chromosome | CDS | 1513695 | 309 | - | 0.368932 |
| fliA | CPS_1519 | motility sigma factor FliA | chromosome | CDS | 1562374 | 720 | + | 0.369444 |
| galR | CPS_3709 | galactose operon repressor | chromosome | CDS | 3859386 | 1002 | + | 0.378244 |
| greA | CPS_3457 | transcription elongation factor GreA | chromosome | CDS | 3591334 | 477 | - | 0.377358 |
| greB | CPS_4966 | transcription elongation factor GreB | chromosome | CDS | 5275993 | 483 | + | 0.414079 |
| hepA | CPS_4519 | RNA polymerase-associated protein HepA | chromosome | CDS | 4768647 | 2928 | + | 0.391735 |
| hutC | CPS_0910 | histidine utilization repressor | chromosome | CDS | 910721 | 738 | - | 0.367209 |
| iciA | CPS_4135 | chromosome initiation inhibitor | chromosome | CDS | 4350779 | 897 | - | 0.38796 |
| ilvY | CPS_4840 | transcriptional regulator IlvY | chromosome | CDS | 5131355 | 879 | + | 0.443686 |
| kdkA | CPS_0117 | 3-deoxy-D-manno-octulosonic acid kinase | chromosome | CDS | 122866 | 777 | - | 0.413127 |
| lexA | CPS_0237 | LexA repressor | chromosome | CDS | 240332 | 636 | - | 0.40566 |
| lrp | CPS_2760 | leucine-responsive regulatory protein | chromosome | CDS | 2874919 | 477 | - | 0.366876 |
| metJ | CPS_0454 | met repressor | chromosome | CDS | 450999 | 330 | - | 0.39697 |
| mfd | CPS_2139 | transcription-repair coupling factor | chromosome | CDS | 2237155 | 3624 | - | 0.403974 |
| nusA | CPS_2202 | transcription termination factor NusA | chromosome | CDS | 2299279 | 1494 | + | 0.408969 |
| nusB | CPS_1532 | transcription termination/antitermination factor NusB | chromosome | CDS | 1573818 | 417 | + | 0.36211 |
| nusG | CPS_4777 | transcription termination/antitermination factor NusG | chromosome | CDS | 5063005 | 588 | - | 0.392857 |
| ompR | CPS_4597 | transcriptional regulatory protein OmpR | chromosome | CDS | 4852684 | 723 | - | 0.410788 |
| oxyR | CPS_4718 | hydrogen peroxide-inducible genes activator | chromosome | CDS | 4994487 | 900 | - | 0.401111 |
| pdhR | CPS_4809 | pyruvate dehydrogenase complex repressor | chromosome | CDS | 5101675 | 792 | - | 0.395202 |
| phoB | CPS_1208 | phosphate regulon response regulator PhoB | chromosome | CDS | 1240979 | 702 | + | 0.377493 |
| phoP | CPS_1388 | transcriptional regulatory protein PhoP | chromosome | CDS | 1428353 | 675 | + | 0.364444 |
| pspA1 | CPS_3772 | phage shock protein A | chromosome | CDS | 3936276 | 666 | - | 0.369369 |
| pspA2 | CPS_4751 | phage shock protein A | chromosome | CDS | 5029068 | 663 | + | 0.372549 |
| pspC | CPS_3770 | phage shock protein C | chromosome | CDS | 3935537 | 453 | - | 0.415011 |
| pspF | CPS_3774 | sigma-54 depedent transcriptional activator PspF | chromosome | CDS | 3937178 | 1119 | + | 0.387846 |
| recG | CPS_4976 | ATP-dependent DNA helicase RecG | chromosome | CDS | 5286333 | 2094 | + | 0.425979 |
| relA | CPS_4115 | GTP pyrophosphokinase | chromosome | CDS | 4328257 | 2214 | - | 0.397019 |
| rhlB | CPS_0174 | ATP-dependent RNA helicase RhlB | chromosome | CDS | 182390 | 1287 | - | 0.393162 |
| rho | CPS_0176 | transcription termination factor Rho | chromosome | CDS | 184591 | 1260 | + | 0.379365 |
| rnc | CPS_4122 | ribonuclease III | chromosome | CDS | 4337947 | 801 | - | 0.383271 |
| rnr | CPS_4617 | ribonuclease R | chromosome | CDS | 4874749 | 2481 | - | 0.406288 |
| rpoA | CPS_0626 | DNA-directed RNA polymerase, alpha subunit | chromosome | CDS | 622788 | 990 | + | 0.425253 |
| rpoB | CPS_4769 | DNA-directed RNA polymerase, beta subunit | chromosome | CDS | 5051564 | 4029 | - | 0.398362 |
| rpoC | CPS_4768 | DNA-directed RNA polymerase, beta' subunit | chromosome | CDS | 5047235 | 4221 | - | 0.408671 |
| rpoD | CPS_4334 | RNA polymerase sigma-70 factor | chromosome | CDS | 4566708 | 1851 | - | 0.403566 |
| rpoE | CPS_4129 | RNA polymerase sigma-24 factor | chromosome | CDS | 4344131 | 627 | - | 0.376396 |
| rpoH | CPS_0161 | RNA polymerase sigma-32 factor | chromosome | CDS | 170906 | 858 | + | 0.374126 |
| rpoN | CPS_4543 | RNA polymerase sigma-54 factor | chromosome | CDS | 4794480 | 1518 | + | 0.384717 |
| rpoS | CPS_1079 | RNA polymerase sigma factor RpoS | chromosome | CDS | 1098522 | 891 | + | 0.382716 |
| rpoZ | CPS_4972 | DNA-directed RNA polymerase, omega subunit | chromosome | CDS | 5282251 | 288 | + | 0.423611 |
| rstA | CPS_1426 | transcriptional regulatory protein RstA | chromosome | CDS | 1463252 | 747 | + | 0.398929 |
| spoT | CPS_4973 | guanosine-3,5-bis(diphosphate)3-pyrophosphohydro lase | chromosome | CDS | 5282834 | 2112 | + | 0.401042 |
| srmB | CPS_4097 | ATP-dependent RNA helicase SrmB | chromosome | CDS | 4311925 | 1293 | + | 0.390565 |
| torR | CPS_1828 | DNA-binding response regulator TorR | chromosome | CDS | 1878801 | 723 | - | 0.387275 |
| tyrR | CPS_3764 | sigma-54 dependent transcriptional regulator TyrR | chromosome | CDS | 3929016 | 1551 | - | 0.400387 |
| umuD1 | CPS_1635 | umuD protein | chromosome | CDS | 1686806 | 414 | + | 0.405797 |
| umuD2 | CPS_2683 | umuD protein | chromosome | CDS | 2791811 | 414 | - | 0.403382 |
|
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