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2024-05-02 23:41:39

Gene list

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COG category: Transcription
Organism: Psychrobacter arcticum 273-4, 273-4

Number of genes found: 86

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Psychrobacter arcticum 273-4, 273-4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Psyc_1695 possible acetyltransferase proteinchromosome CDS2096525 624 - 0.424679
NA Psyc_1798 possible transcriptional regulator, LysR-familychromosome CDS2209091 909 + 0.456546
NA Psyc_1236 probable transcriptional regulator, LysR familychromosome CDS1482020 930 + 0.466667
NA Psyc_1570 posible transcriptinal regulatorchromosome CDS1922067 552 + 0.442029
NA Psyc_1476 possible transcriptional regulators protein familychromosome CDS1794791 513 + 0.432749
NA Psyc_0050 probable transcriptional regulator, LysR familychromosome CDS56291 936 + 0.41453
NA Psyc_0807 probable transcriptional regulatory protein, IclR familychromosome CDS966522 759 - 0.465086
NA Psyc_1381 possible transcription factorchromosome CDS1666288 1092 - 0.400183
NA Psyc_1469 conserved Hypothetical proteinchromosome CDS1786000 876 + 0.46347
NA Psyc_1230 probable transcriptional regulator, AsnC familychromosome CDS1474615 489 + 0.437628
NA Psyc_2085 probable DNA helicasechromosome CDS2563238 2427 - 0.478368
NA Psyc_1094 transcriptional regulatory protein, LysR familychromosome CDS1305370 915 + 0.437158
NA Psyc_0905 probable transcriptional regulatory protein, IclR familychromosome CDS1084339 759 - 0.444005
NA Psyc_0472 possible transcriptional regulator, Cro/CI familychromosome CDS579446 675 + 0.391111
NA Psyc_1084 probable transcription regulator proteinchromosome CDS1295387 1413 - 0.465676
NA Psyc_1775 putative stress-responsive transcriptional regulator, PspCchromosome CDS2186075 213 - 0.413146
NA Psyc_1132 probable transcriptional regulator, LysR familychromosome CDS1354889 912 - 0.428728
NA Psyc_0386 putative transcriptional regulatory protein, MerR familychromosome CDS481988 435 - 0.388506
NA Psyc_0314 possible transcriptional regulatorchromosome CDS386881 729 - 0.470508
NA Psyc_0730 possible transcriptional regulatory protein, TetR familychromosome CDS870804 564 - 0.460993
NA Psyc_0989 merops peptidase family S24chromosome CDS1184381 720 - 0.438889
NA Psyc_0703 putative transcriptional regulator, LuxR familychromosome CDS836624 636 - 0.415094
NA Psyc_2076 probable two-component transcriptional response regulator (ompR family)chromosome CDS2552276 675 + 0.441481
NA Psyc_0985 possible DNA binding protein , Helix turn helix motifchromosome CDS1180570 348 + 0.333333
NA Psyc_1596 transcriptional regulatory reciever proteinchromosome CDS1951340 717 + 0.417015
NA Psyc_1844 possible transcription regulatory protein ,LysR familychromosome CDS2269252 936 - 0.472222
NA Psyc_2022 putative two-component response regulator (CheY-like receiver domain)chromosome CDS2490519 717 - 0.454672
NA Psyc_1820 putative two component response regulatorchromosome CDS2238714 723 + 0.42462
NA Psyc_1791 probable transcriptional regulator, ArsR familychromosome CDS2202140 291 + 0.463918
NA Psyc_1672 transcriptional regulator, LysR familychromosome CDS2069380 867 + 0.452134
NA Psyc_1395 possible transcriptional regulator, TetR familychromosome CDS1687382 609 - 0.490969
NA Psyc_0804 putative transcription regulatory protein, IclR familychromosome CDS962616 828 - 0.469807
NA Psyc_0891 possible transcriptional regulator, TetR familychromosome CDS1065699 684 + 0.435673
NA Psyc_1846 CspEchromosome CDS2271782 210 - 0.414286
NA Psyc_1329 possible transcriptional regulator ,TetR familychromosome CDS1605538 741 - 0.377868
NA Psyc_1351 probable transcriptional regulator, TetR familychromosome CDS1628662 639 + 0.43975
NA Psyc_1056 putative transcriptional regulatory protein LysR familychromosome CDS1254867 900 + 0.426667
NA Psyc_0952 putative transcriptional regulatory protein, ArsR familychromosome CDS1137936 375 + 0.464
NA Psyc_1626 probable Transcription regulator, LysR familychromosome CDS2008784 990 - 0.461616
NA Psyc_1666 putative Trp operon transcriptional repressorchromosome CDS2063570 276 + 0.445652
NA Psyc_1136 probable DNA binding protein, helix turn helix motifchromosome CDS1360421 306 + 0.421569
NA Psyc_0127 conserved hypothetical proteinchromosome CDS149143 2523 + 0.462545
NA Psyc_1665 possible transcriptional regulator, TetR familychromosome CDS2062387 666 - 0.463964
NA Psyc_1082 possible ATP-dependent DEAD/DEAH box RNA-helicasechromosome CDS1292149 1704 + 0.477113
NA Psyc_1174 probable transcriptional regulatory protein, iclR familychromosome CDS1404421 846 + 0.413712
NA Psyc_0998 hypothetical proteinchromosome CDS1191327 561 - 0.390374
NA Psyc_1108 probable transcriptional regulator, LysR familychromosome CDS1318828 1014 + 0.454635
NA Psyc_1905 conserved hypothetical proteinchromosome CDS2353814 252 - 0.436508
NA Psyc_2142 conserved hypothetical proteinchromosome CDS2645192 459 - 0.437909
NA Psyc_1162 putative two component system regulatory proteinchromosome CDS1389665 702 + 0.431624
NA Psyc_0291 hypothetical proteinchromosome CDS357352 375 - 0.389333
NA Psyc_0892 conserved hypothetical proteinchromosome CDS1066746 681 - 0.443466
algH Psyc_0057 putative transcriptional regulatorchromosome CDS63380 564 - 0.462766
alpA Psyc_0868 possible prophage regulatory protein AlpAchromosome CDS1035457 282 + 0.411348
arsR Psyc_1075 probable transcriptional regulatory protein, ArsR familychromosome CDS1285357 324 - 0.388889
capB Psyc_0942 putative Cold-shock proteinchromosome CDS1128371 216 + 0.421296
cspA Psyc_0531 transcriptional regulator, CspAchromosome CDS625818 213 + 0.441315
fis Psyc_1471 probable Fis-type transcriptional activatorchromosome CDS1788227 360 + 0.425
greA Psyc_0813 GreA transcription elongation factorchromosome CDS975447 477 - 0.457023
hepA Psyc_1986 probable superfamily II DNA/RNA helicasechromosome CDS2449487 2949 - 0.48118
lysR Psyc_1414 probable transcriptional regulator, LysR familychromosome CDS1711249 873 + 0.452463
malT Psyc_1446 probable transcriptional regulator, luxR familychromosome CDS1751547 2766 + 0.372379
mdcY Psyc_1149 putative transcriptional regulator protein, GntR familychromosome CDS1374461 672 + 0.354167
metR Psyc_0216 putative transcriptional regulator, LysR familychromosome CDS254413 891 - 0.480359
mfd Psyc_1484 transcription-repair coupling factorchromosome CDS1801921 3732 - 0.459807
narL Psyc_0602 nitrate/nitrite response regulator, possibly NarLchromosome CDS717103 660 - 0.410606
nusA Psyc_0068 putative nusA antitermination factorchromosome CDS76010 1485 + 0.434343
nusB Psyc_2070 probable NusB antitermination factorchromosome CDS2544836 1128 + 0.453901
nusG Psyc_1892 NusG antitermination factorchromosome CDS2336805 531 - 0.408663
ompR Psyc_0126 transcriptional regulatory protein, OmpRchromosome CDS147959 765 - 0.487582
parB Psyc_1319 ParB family binding proteinchromosome CDS1589303 1128 - 0.45922
phoB Psyc_1923 putative two-component response regulatorchromosome CDS2371567 705 - 0.449645
ppkA Psyc_1539 putative Protein kinase:Serine/Threonine protein kinasechromosome CDS1883793 993 - 0.411883
relA Psyc_0343 putative RelA/SpoT family proteinchromosome CDS423686 2541 - 0.437623
rhlB Psyc_0943 putative ATP-dependent RNA helicasechromosome CDS1128808 1191 + 0.438287
rho Psyc_1990 transcription termination factor Rhochromosome CDS2456173 1308 + 0.44419
rnc Psyc_0333 putative dsRNA specific ribonuclease IIIchromosome CDS412567 798 + 0.438596
rpoA Psyc_0514 DNA-directed RNA polymerase, 30-40 kDa subunit:RNA polymerase, alpha chain, bacterial and organellechromosome CDS608345 1008 + 0.427579
rpoB Psyc_1887 RNA polymerase beta-subunitchromosome CDS2329248 4119 - 0.434814
rpoC Psyc_1886 RNA polymerase, alpha-subunitchromosome CDS2324839 4221 - 0.44018
rpoD Psyc_1260 putative sigma-70 factor (RpoD)chromosome CDS1516085 1944 + 0.467078
rpoH Psyc_0207 putative Sigma 32 (RpoH)chromosome CDS246530 1026 - 0.467836
rpoN Psyc_0203 probable Sigma-54 factor family (RpoN)chromosome CDS242863 1710 + 0.45731
rpoZ Psyc_1724 RNA polymerase, omega subunitchromosome CDS2124134 261 + 0.452107
spoT Psyc_1725 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase:(p)ppGpp synthetase IIchromosome CDS2124740 2187 + 0.442615
vacB Psyc_2101 probable exoribonuclease RNase Rchromosome CDS2596480 2316 + 0.426598