Gene list
Applied filters:
COG category: Transcription
Organism: Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
Number of genes found: 397
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| Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978 | ||||||||
|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | PSPPH_2421 | transcriptional regulator, AraC family | chromosome | CDS | 2799843 | 954 | - | 0.607966 |
| NA | PSPPH_3268 | transcriptional regulator, TetR family | chromosome | CDS | 3787477 | 630 | + | 0.550794 |
| NA | PSPPH_0653 | prophage PSPPH01, transcriptional regulator, Cro/CI family | chromosome | CDS | 771739 | 648 | - | 0.589506 |
| NA | PSPPH_2106 | transcriptional regulator, TetR family | chromosome | CDS | 2466857 | 672 | + | 0.540179 |
| NA | PSPPH_4841 | transcriptional regulator, AraC family | chromosome | CDS | 5500510 | 900 | - | 0.61 |
| NA | PSPPH_4858 | transcriptional regulator, LacI family | chromosome | CDS | 5521526 | 1047 | + | 0.614136 |
| NA | PSPPH_2193 | transcriptional regulator, LysR family | chromosome | CDS | 2549079 | 912 | + | 0.60636 |
| NA | PSPPH_1374 | DNA-binding response regulator, LuxR family | chromosome | CDS | 1595842 | 627 | + | 0.547049 |
| NA | PSPPH_5042 | transcriptional regulator, AsnC family | chromosome | CDS | 5713737 | 489 | + | 0.550102 |
| NA | PSPPH_2772 | transcriptional regulator, LysR family | chromosome | CDS | 3209293 | 894 | - | 0.592841 |
| NA | PSPPH_0918 | acetyltransferase, GNAT family | chromosome | CDS | 1092951 | 486 | + | 0.518519 |
| NA | PSPPH_1146 | TetR family transcriptional regulator-like protein | chromosome | CDS | 1345074 | 423 | - | 0.541371 |
| NA | PSPPH_2219 | transcriptional regulator, AsnC family | chromosome | CDS | 2575402 | 468 | - | 0.587607 |
| NA | PSPPH_0111 | acetyltransferase, GNAT family | chromosome | CDS | 128275 | 456 | + | 0.535088 |
| NA | PSPPH_4694 | unnamed protein product | chromosome | CDS | 5328335 | 252 | - | 0.575397 |
| NA | PSPPH_5194 | conserved hypothetical protein | chromosome | CDS | 5895915 | 456 | - | 0.565789 |
| NA | PSPPH_4377 | transcriptional regulator, AsnC family | chromosome | CDS | 4999313 | 480 | + | 0.579167 |
| NA | PSPPH_1493 | transcriptional regulator, LysR family | chromosome | CDS | 1734479 | 909 | + | 0.630363 |
| NA | PSPPH_0345 | RNA polymerase sigma-70 family protein | chromosome | CDS | 392821 | 1272 | - | 0.618711 |
| NA | PSPPH_0102 | ParB-like nuclease | chromosome | CDS | 113614 | 966 | + | 0.498965 |
| NA | PSPPH_5132 | transcriptional regulator, LysR family | chromosome | CDS | 5819961 | 912 | - | 0.623904 |
| NA | PSPPH_3577 | transcriptional regulator, GntR family | chromosome | CDS | 4122184 | 765 | + | 0.607843 |
| NA | PSPPH_2315 | transcriptional regulator, GntR family | chromosome | CDS | 2687458 | 1407 | + | 0.591329 |
| NA | PSPPH_4161 | fagA protein | chromosome | CDS | 4743763 | 408 | - | 0.595588 |
| NA | PSPPH_4246 | acetyltransferase, GNAT family | chromosome | CDS | 4843633 | 456 | - | 0.594298 |
| NA | PSPPH_3460 | transcriptional regulator, LysR family | chromosome | CDS | 3998153 | 912 | - | 0.616228 |
| NA | PSPPH_2392 | peptidase, S24 family | chromosome | CDS | 2771397 | 723 | - | 0.571231 |
| NA | PSPPH_3611 | transcriptional regulator, LysR family | chromosome | CDS | 4156947 | 906 | - | 0.612583 |
| NA | PSPPH_4529 | ROK family protein | chromosome | CDS | 5163441 | 1131 | - | 0.595933 |
| NA | PSPPH_2689 | transcriptional regulator, LysR family | chromosome | CDS | 3113455 | 906 | - | 0.620309 |
| NA | PSPPH_2067 | RNA polymerase sigma factor-70 sigW, putative | chromosome | CDS | 2422643 | 498 | + | 0.471888 |
| NA | PSPPH_2469 | transcriptional regulator, LysR family | chromosome | CDS | 2851373 | 900 | + | 0.606667 |
| NA | PSPPH_0101 | ParB family protein | chromosome | CDS | 112706 | 909 | + | 0.476348 |
| NA | PSPPH_3022 | transcriptional regulator, LysR family | chromosome | CDS | 3508228 | 903 | - | 0.595792 |
| NA | PSPPH_4700 | transcriptional regulator, AsnC family | chromosome | CDS | 5335677 | 462 | + | 0.621212 |
| NA | PSPPH_4977 | prophage PSPPH06, acetyltransferase, GNAT family | chromosome | CDS | 5646120 | 447 | + | 0.52349 |
| NA | PSPPH_4322 | NAD-dependent deacetylase 4 (Regulatory protein SIR2homolog 4) | chromosome | CDS | 4937018 | 771 | - | 0.553826 |
| NA | PSPPH_2893 | transcriptional regulator, AraC family | chromosome | CDS | 3343845 | 948 | - | 0.600211 |
| NA | PSPPH_3122 | transcriptional regulator | chromosome | CDS | 3623017 | 990 | - | 0.610101 |
| NA | PSPPH_5140 | acetyltransferase, GNAT family | chromosome | CDS | 5830003 | 447 | + | 0.579418 |
| NA | PSPPH_1244 | transcriptional regulator, AsnC family | chromosome | CDS | 1451585 | 480 | - | 0.5625 |
| NA | PSPPH_2994 | transcriptional regulator, AraC family | chromosome | CDS | 3476396 | 1038 | + | 0.604046 |
| NA | PSPPH_0589 | transcriptional regulator, LysR family | chromosome | CDS | 696313 | 906 | - | 0.59713 |
| NA | PSPPH_2072 | serine/threonine protein kinase | chromosome | CDS | 2429363 | 1662 | - | 0.618532 |
| NA | PSPPH_2818 | acetyltransferase, GNAT family | chromosome | CDS | 3263636 | 459 | - | 0.533769 |
| NA | PSPPH_3040 | DNA-binding response regulator | chromosome | CDS | 3531153 | 684 | + | 0.581871 |
| NA | PSPPH_1737 | transcriptional regulator, LysR family | chromosome | CDS | 2016765 | 909 | - | 0.613861 |
| NA | PSPPH_A0102 | YacA | large plasmid | CDS | 89935 | 288 | + | 0.572917 |
| NA | PSPPH_1909 | RNA polymerase sigma-70 family protein | chromosome | CDS | 2214870 | 537 | - | 0.582868 |
| NA | PSPPH_5139 | transcriptional regulator | chromosome | CDS | 5829290 | 717 | + | 0.552301 |
| NA | PSPPH_4692 | transcriptional regulator, AraC family | chromosome | CDS | 5326898 | 837 | - | 0.603345 |
| NA | PSPPH_3645 | transcriptional regulator, MarR family | chromosome | CDS | 4190004 | 474 | + | 0.563291 |
| NA | PSPPH_3241 | transcriptional regulator, LysR family | chromosome | CDS | 3755660 | 936 | - | 0.586538 |
| NA | PSPPH_3297 | transcriptional regulator, MarR family | chromosome | CDS | 3821218 | 453 | + | 0.631347 |
| NA | PSPPH_4241 | DNA-binding response regulator, LuxR family | chromosome | CDS | 4838479 | 630 | + | 0.553968 |
| NA | PSPPH_1670 | transcriptional regulator, AraC family | chromosome | CDS | 1931324 | 1041 | - | 0.611912 |
| NA | PSPPH_0668 | prophage PSPPH01, DNA-binding protein | chromosome | CDS | 784730 | 201 | - | 0.482587 |
| NA | PSPPH_2213 | protein kinase, putative | chromosome | CDS | 2569837 | 1305 | - | 0.604598 |
| NA | PSPPH_5144 | transcriptional regulator, LysR family | chromosome | CDS | 5834698 | 936 | + | 0.582265 |
| NA | PSPPH_2921 | transcriptional regulator, LysR family | chromosome | CDS | 3393048 | 909 | - | 0.607261 |
| NA | PSPPH_1093 | RNA polymerase sigma-70 family protein | chromosome | CDS | 1288105 | 597 | - | 0.577889 |
| NA | PSPPH_3634 | ATP-dependent RNA helicase, DEAD box family | chromosome | CDS | 4178536 | 1713 | - | 0.615295 |
| NA | PSPPH_2823 | acetyltransferase, GNAT family | chromosome | CDS | 3269171 | 576 | + | 0.595486 |
| NA | PSPPH_0476 | Uncharacterized ACR, COG1678 | chromosome | CDS | 539049 | 573 | - | 0.586387 |
| NA | PSPPH_1758 | transcriptional regulator, LysR family | chromosome | CDS | 2057413 | 855 | + | 0.594152 |
| NA | PSPPH_0105 | MloB | chromosome | CDS | 120413 | 1470 | - | 0.602041 |
| NA | PSPPH_1716 | acetyltransferase, GNAT family | chromosome | CDS | 1984377 | 555 | + | 0.540541 |
| NA | PSPPH_0077 | transcriptional regulator, LysR family | chromosome | CDS | 82147 | 921 | - | 0.598263 |
| NA | PSPPH_2194 | transcriptional regulator, Cro/CI family | chromosome | CDS | 2550022 | 492 | - | 0.565041 |
| NA | PSPPH_1776 | transcriptional regulator, GntR family | chromosome | CDS | 2076379 | 660 | + | 0.598485 |
| NA | PSPPH_0145 | conserved hypothetical protein | chromosome | CDS | 171112 | 474 | - | 0.616034 |
| NA | PSPPH_4674 | DNA-binding protein | chromosome | CDS | 5311478 | 246 | + | 0.556911 |
| NA | PSPPH_2635 | acetyltransferase, GNAT family | chromosome | CDS | 3040907 | 672 | + | 0.572917 |
| NA | PSPPH_4140 | toluene tolerance protein Ttg2F, putative | chromosome | CDS | 4727811 | 240 | - | 0.529167 |
| NA | PSPPH_2688 | transcriptional regulator, LysR family | chromosome | CDS | 3112520 | 912 | - | 0.622807 |
| NA | PSPPH_3127 | DNA-binding response regulator | chromosome | CDS | 3629456 | 669 | - | 0.581465 |
| NA | PSPPH_3706 | transcriptional regulator, Sir2 family | chromosome | CDS | 4252856 | 744 | - | 0.591398 |
| NA | PSPPH_3066 | transcriptional regulator, TetR family | chromosome | CDS | 3562025 | 645 | - | 0.59845 |
| NA | PSPPH_4638 | transcriptional regulator, LysR family | chromosome | CDS | 5276251 | 924 | - | 0.621212 |
| NA | PSPPH_2327 | regulatory protein, putative | chromosome | CDS | 2702976 | 342 | + | 0.54386 |
| NA | PSPPH_5107 | conserved hypothetical protein | chromosome | CDS | 5794573 | 378 | - | 0.55291 |
| NA | PSPPH_3106 | acetyltransferase, GNAT family | chromosome | CDS | 3604579 | 432 | + | 0.592593 |
| NA | PSPPH_1748 | acetyltransferase, GNAT family | chromosome | CDS | 2027936 | 519 | - | 0.55684 |
| NA | PSPPH_2905 | transcriptional regulatory protein NfxB | chromosome | CDS | 3372798 | 573 | - | 0.609075 |
| NA | PSPPH_5204 | transcriptional regulator, DeoR family | chromosome | CDS | 5908358 | 768 | - | 0.571615 |
| NA | PSPPH_2439 | LysR protein | chromosome | CDS | 2821022 | 933 | + | 0.607717 |
| NA | PSPPH_4844 | transcriptional regulator, DeoR family | chromosome | CDS | 5503973 | 780 | + | 0.612821 |
| NA | PSPPH_3651 | conserved hypothetical protein | chromosome | CDS | 4194634 | 483 | + | 0.567288 |
| NA | PSPPH_2444 | transcriptional regulator, LysR family | chromosome | CDS | 2825240 | 918 | - | 0.600218 |
| NA | PSPPH_3990 | probable transcriptional regulator, LysR family | chromosome | CDS | 4555182 | 987 | + | 0.503546 |
| NA | PSPPH_2832 | transcriptional regulator, IclR family | chromosome | CDS | 3278769 | 840 | - | 0.632143 |
| NA | PSPPH_4056 | transcriptional regulator, ArsR family | chromosome | CDS | 4637911 | 315 | + | 0.565079 |
| NA | PSPPH_3817 | transcriptional regulator, LysR family | chromosome | CDS | 4368525 | 897 | + | 0.57971 |
| NA | PSPPH_1456 | conserved hypothetical protein | chromosome | CDS | 1698713 | 705 | - | 0.588652 |
| NA | PSPPH_1222 | transcriptional regulator, ArsR family | chromosome | CDS | 1430591 | 297 | + | 0.569024 |
| NA | PSPPH_1906 | DNA-binding response regulator, LuxR family | chromosome | CDS | 2212230 | 669 | - | 0.624813 |
| NA | PSPPH_1435 | transcriptional regulator, LysR family | chromosome | CDS | 1674185 | 924 | - | 0.634199 |
| NA | PSPPH_4899 | transcriptional regulator, TetR family | chromosome | CDS | 5573115 | 633 | + | 0.600316 |
| NA | PSPPH_0449 | ATP-dependent RNA helicase RhlE, putative | chromosome | CDS | 510601 | 1878 | - | 0.631523 |
| NA | PSPPH_1730 | transcriptional regulator, TetR family | chromosome | CDS | 2006402 | 933 | + | 0.546624 |
| NA | PSPPH_3411 | transcription regulator CynR, putative | chromosome | CDS | 3944062 | 867 | + | 0.602076 |
| NA | PSPPH_2917 | DNA-binding protein | chromosome | CDS | 3389554 | 576 | + | 0.581597 |
| NA | PSPPH_2580 | transcriptional regulator, LysR family | chromosome | CDS | 2973608 | 903 | - | 0.581395 |
| NA | PSPPH_1728 | transcriptional regulator, TetR family | chromosome | CDS | 2002754 | 609 | - | 0.591133 |
| NA | PSPPH_0526 | toluene tolerance protein, putative | chromosome | CDS | 617912 | 681 | - | 0.56094 |
| NA | PSPPH_1962 | transcriptional regulator, AraC family | chromosome | CDS | 2309890 | 894 | + | 0.587248 |
| NA | PSPPH_1175 | RNA polymerase sigma-70 family protein | chromosome | CDS | 1380270 | 564 | - | 0.583333 |
| NA | PSPPH_1519 | transcriptional regulator, MarR family | chromosome | CDS | 1766638 | 435 | + | 0.602299 |
| NA | PSPPH_2488 | BRO family, N-terminal domain protein | chromosome | CDS | 2873873 | 540 | - | 0.603704 |
| NA | PSPPH_0711 | transcriptional regulator, LysR family | chromosome | CDS | 834790 | 933 | + | 0.577706 |
| NA | PSPPH_2236 | transcriptional regulator, LysR family | chromosome | CDS | 2594925 | 960 | + | 0.6 |
| NA | PSPPH_2733 | transcriptional regulator, TetR family | chromosome | CDS | 3164932 | 681 | - | 0.58884 |
| NA | PSPPH_2491 | transcriptional regulator, LysR family | chromosome | CDS | 2877508 | 906 | - | 0.612583 |
| NA | PSPPH_2721 | hypothetical protein | chromosome | CDS | 3148291 | 210 | - | 0.6 |
| NA | PSPPH_4495 | transcriptional regulator, TetR family | chromosome | CDS | 5131972 | 633 | + | 0.601896 |
| NA | PSPPH_0239 | transcriptional regulator, AsnC family | chromosome | CDS | 275551 | 480 | + | 0.589583 |
| NA | PSPPH_0755 | transcriptional regulator, TetR family | chromosome | CDS | 882507 | 639 | + | 0.469484 |
| NA | PSPPH_1872 | ultraviolet light resistance protein RulA, putative | chromosome | CDS | 2174428 | 444 | + | 0.576577 |
| NA | PSPPH_3793 | acetyltransferase, GNAT family | chromosome | CDS | 4346452 | 441 | + | 0.573696 |
| NA | PSPPH_0515 | lipopolysaccharide biosynthesis protein, putative | chromosome | CDS | 601110 | 780 | + | 0.598718 |
| NA | PSPPH_3487 | transcriptional regulatory protein | chromosome | CDS | 4026796 | 564 | - | 0.554965 |
| NA | PSPPH_4637 | transcriptional regulator, putative | chromosome | CDS | 5275118 | 693 | - | 0.630592 |
| NA | PSPPH_2316 | Uvs006 | chromosome | CDS | 2688895 | 2403 | + | 0.605493 |
| NA | PSPPH_3468 | transcriptional regulator, LysR family | chromosome | CDS | 4006949 | 906 | + | 0.611479 |
| NA | PSPPH_1818 | transcriptional regulator, LuxR family | chromosome | CDS | 2119484 | 723 | + | 0.550484 |
| NA | PSPPH_2630 | transcriptional regulator, MerR family | chromosome | CDS | 3035500 | 393 | - | 0.569975 |
| NA | PSPPH_1406 | ATP-dependent helicase, DinG family | chromosome | CDS | 1629280 | 2145 | + | 0.631235 |
| NA | PSPPH_2149 | prophage PSPPH03, transcriptional regulator, LuxR family | chromosome | CDS | 2502610 | 402 | - | 0.631841 |
| NA | PSPPH_3923 | transcriptional regulator, PadR family | chromosome | CDS | 4482886 | 591 | + | 0.612521 |
| NA | PSPPH_2476 | transcriptional regulator, LysR family | chromosome | CDS | 2859317 | 888 | - | 0.629505 |
| NA | PSPPH_3752 | acetyltransferase, GNAT family | chromosome | CDS | 4304199 | 450 | + | 0.508889 |
| NA | PSPPH_5054 | transcriptional regulator, AsnC family | chromosome | CDS | 5729917 | 471 | + | 0.613588 |
| NA | PSPPH_2496 | NAD-dependent deacetylase | chromosome | CDS | 2883466 | 846 | - | 0.612293 |
| NA | PSPPH_1969 | transcriptional regulator, GntR family | chromosome | CDS | 2317026 | 1440 | + | 0.584722 |
| NA | PSPPH_3547 | DNA-binding response regulator | chromosome | CDS | 4083477 | 678 | + | 0.625369 |
| NA | PSPPH_3800 | DNA-binding response regulator, LuxR family | chromosome | CDS | 4351309 | 648 | - | 0.580247 |
| NA | PSPPH_2015 | transcriptional regulator, LuxR family | chromosome | CDS | 2367892 | 264 | - | 0.587121 |
| NA | PSPPH_5145 | transcriptional regulator, RpiR family | chromosome | CDS | 5835914 | 867 | - | 0.597463 |
| NA | PSPPH_2655 | acetyltransferase, GNAT family | chromosome | CDS | 3079011 | 567 | + | 0.57672 |
| NA | PSPPH_1800 | transcriptional regulator, MarR family | chromosome | CDS | 2105811 | 471 | - | 0.575372 |
| NA | PSPPH_0778 | DNA-binding response regulator, LuxR family | chromosome | CDS | 914293 | 639 | + | 0.43975 |
| NA | PSPPH_1875 | conserved domain protein | chromosome | CDS | 2176429 | 357 | - | 0.557423 |
| NA | PSPPH_0700 | ISPsy20, transposase IstB, transcriptional regulator, LysR family-fusion | chromosome | CDS | 823009 | 2523 | - | 0.567975 |
| NA | PSPPH_3936 | transcriptional regulator, GntR family | chromosome | CDS | 4497428 | 1002 | + | 0.617764 |
| NA | PSPPH_4324 | RtrR protein | chromosome | CDS | 4938655 | 231 | + | 0.549784 |
| NA | PSPPH_3195 | SIS domain protein | chromosome | CDS | 3706741 | 909 | + | 0.589659 |
| NA | PSPPH_4356 | AsnC family transcriptional regulatory protein | chromosome | CDS | 4979352 | 468 | + | 0.581197 |
| NA | PSPPH_4956 | conserved hypothetical protein | chromosome | CDS | 5629839 | 318 | - | 0.610063 |
| NA | PSPPH_2720 | transcriptional regulator, GntR family | chromosome | CDS | 3147510 | 741 | + | 0.561404 |
| NA | PSPPH_0177 | transcriptional regulator, LysR family | chromosome | CDS | 210746 | 765 | + | 0.488889 |
| NA | PSPPH_3031 | transcriptional regulator, GntR family | chromosome | CDS | 3519678 | 714 | - | 0.606443 |
| NA | PSPPH_2522 | hypothetical protein | chromosome | CDS | 2910485 | 417 | + | 0.628297 |
| NA | PSPPH_3643 | transcriptional regulator, LysR family | chromosome | CDS | 4188224 | 855 | + | 0.583626 |
| NA | PSPPH_3168 | sigma-54 dependent transcriptional regulator, putative | chromosome | CDS | 3675147 | 1107 | + | 0.607949 |
| NA | PSPPH_1579 | transcriptional regulator, LysR family | chromosome | CDS | 1832899 | 921 | + | 0.588491 |
| NA | PSPPH_2665 | transcriptional regulator, IclR family | chromosome | CDS | 3086138 | 765 | + | 0.59085 |
| NA | PSPPH_5024 | acetyltransferase, GNAT family | chromosome | CDS | 5692627 | 504 | + | 0.571429 |
| NA | PSPPH_2249 | acetyltransferase, GNAT family | chromosome | CDS | 2612687 | 492 | + | 0.54065 |
| NA | PSPPH_2423 | transcriptional regulator, LysR family | chromosome | CDS | 2801750 | 285 | + | 0.519298 |
| NA | PSPPH_4744 | transcriptional regulator, AraC family | chromosome | CDS | 5386239 | 1104 | - | 0.599638 |
| NA | PSPPH_1584 | transcriptional regulator, Cro/CI family | chromosome | CDS | 1837900 | 342 | + | 0.611111 |
| NA | PSPPH_3464 | transcriptional regulator, LysR family | chromosome | CDS | 4002154 | 927 | + | 0.583603 |
| NA | PSPPH_3027 | sugar diacide regulator | chromosome | CDS | 3514776 | 420 | - | 0.62381 |
| NA | PSPPH_4998 | transcriptional regulator | chromosome | CDS | 5668182 | 882 | + | 0.545351 |
| NA | PSPPH_3155 | transcriptional regulator, LysR family | chromosome | CDS | 3658549 | 891 | - | 0.611672 |
| NA | PSPPH_2151 | prophage PSPPH03, transcriptional regulator, Cro/CI family | chromosome | CDS | 2505417 | 861 | - | 0.552846 |
| NA | PSPPH_1393 | repressor protein c2, putative | chromosome | CDS | 1618087 | 927 | + | 0.558792 |
| NA | PSPPH_2862 | transcriptional regulator, AraC family | chromosome | CDS | 3308614 | 834 | + | 0.569544 |
| NA | PSPPH_1160 | cold shock domain family protein | chromosome | CDS | 1361947 | 213 | - | 0.525822 |
| NA | PSPPH_4508 | conserved hypothetical protein TIGR00244 | chromosome | CDS | 5141468 | 465 | - | 0.595699 |
| NA | PSPPH_4253 | transcriptional regulator, GntR family | chromosome | CDS | 4852960 | 750 | - | 0.622667 |
| NA | PSPPH_B0023 | transcriptional regulator | small plasmid | CDS | 18999 | 750 | + | 0.513333 |
| NA | PSPPH_1206 | acetyltransferase, GNAT family | chromosome | CDS | 1416499 | 462 | - | 0.584416 |
| NA | PSPPH_1364 | DNA-binding response regulator, LuxR family | chromosome | CDS | 1583646 | 639 | - | 0.580595 |
| NA | PSPPH_0757 | hypothetical protein | chromosome | CDS | 887336 | 546 | + | 0.587912 |
| NA | PSPPH_4336 | transcriptional regulator, LuxR family | chromosome | CDS | 4957476 | 120 | + | 0.558333 |
| NA | PSPPH_3233 | transcriptional regulator, LysR family | chromosome | CDS | 3747750 | 954 | - | 0.598532 |
| NA | PSPPH_0031 | transcriptional regulator, LysR family | chromosome | CDS | 37344 | 951 | + | 0.616193 |
| NA | PSPPH_3471 | transcriptional regulator, GntR family | chromosome | CDS | 4010179 | 720 | - | 0.613889 |
| NA | PSPPH_5138 | transcriptional regulator, GntR family | chromosome | CDS | 5827716 | 1563 | - | 0.59501 |
| NA | PSPPH_3415 | flagellin synthesis, negative regulator, FlgM, putative | chromosome | CDS | 3947837 | 315 | + | 0.51746 |
| NA | PSPPH_1049 | transcriptional regulator, TetR family | chromosome | CDS | 1240644 | 837 | + | 0.599761 |
| NA | PSPPH_0904 | acetyltransferase, GNAT family | chromosome | CDS | 1077477 | 438 | - | 0.557078 |
| NA | PSPPH_4620 | transcriptional regulator, LysR family | chromosome | CDS | 5255884 | 921 | + | 0.595005 |
| NA | PSPPH_3654 | transcriptional regulator, TetR family | chromosome | CDS | 4197240 | 570 | + | 0.535088 |
| NA | PSPPH_2792 | prophage PSPPH05, DNA-binding protein | chromosome | CDS | 3231624 | 348 | + | 0.511494 |
| NA | PSPPH_3479 | transcriptional regulator, TetR family | chromosome | CDS | 4020265 | 600 | + | 0.565 |
| NA | PSPPH_1781 | acetyltransferase, GNAT family | chromosome | CDS | 2085996 | 489 | - | 0.576687 |
| NA | PSPPH_1100 | transcriptional regulator, LysR family | chromosome | CDS | 1294038 | 948 | - | 0.605485 |
| NA | PSPPH_B0018 | transcriptional regulator, GntR family | small plasmid | CDS | 14998 | 702 | + | 0.508547 |
| NA | PSPPH_2967 | transcriptional regulator, LysR family | chromosome | CDS | 3444607 | 897 | - | 0.632107 |
| NA | PSPPH_2486 | acetyltransferase, GNAT family | chromosome | CDS | 2871996 | 504 | - | 0.597222 |
| NA | PSPPH_2563 | transcriptional regulator, GntR family | chromosome | CDS | 2954692 | 921 | - | 0.609121 |
| NA | PSPPH_4669 | acetyltransferase, GNAT family | chromosome | CDS | 5307234 | 459 | + | 0.546841 |
| NA | PSPPH_2872 | sigma-54 dependent transcriptional regulator | chromosome | CDS | 3316280 | 1551 | - | 0.624114 |
| NA | PSPPH_1136 | transcriptional regulatory protein | chromosome | CDS | 1336122 | 444 | + | 0.578829 |
| NA | PSPPH_3323 | acetyltransferase, GNAT family | chromosome | CDS | 3844258 | 861 | + | 0.636469 |
| NA | PSPPH_1543 | conserved hypothetical protein | chromosome | CDS | 1795415 | 249 | - | 0.526104 |
| NA | PSPPH_1849 | helicase/SNF2 family domain protein | chromosome | CDS | 2144803 | 2745 | - | 0.610929 |
| NA | PSPPH_3005 | transcriptional regulator, GntR family | chromosome | CDS | 3488478 | 765 | + | 0.60915 |
| NA | PSPPH_1734 | transcriptional regulator, ArsR family | chromosome | CDS | 2011620 | 684 | + | 0.624269 |
| NA | PSPPH_5065 | conserved hypothetical protein | chromosome | CDS | 5741856 | 555 | - | 0.571171 |
| NA | PSPPH_3278 | transcriptional regulator, LysR family | chromosome | CDS | 3799414 | 1206 | - | 0.61194 |
| NA | PSPPH_2188 | transcriptional regulator, DeoR family | chromosome | CDS | 2544643 | 837 | + | 0.586619 |
| NA | PSPPH_1011 | transcriptional regulator, MerR family | chromosome | CDS | 1202304 | 903 | - | 0.614618 |
| NA | PSPPH_3010 | acetyltransferase, GNAT family | chromosome | CDS | 3494582 | 627 | - | 0.578947 |
| NA | PSPPH_1474 | acetyltransferase, GNAT family | chromosome | CDS | 1714059 | 411 | - | 0.620438 |
| NA | PSPPH_0927 | RNA polymerase sigma factor sigW, putative | chromosome | CDS | 1102470 | 609 | - | 0.573071 |
| NA | PSPPH_3048 | transcriptional regulator, GntR family | chromosome | CDS | 3542217 | 801 | - | 0.576779 |
| NA | PSPPH_1097 | transcriptional regulator, AraC family | chromosome | CDS | 1291025 | 876 | - | 0.615297 |
| NA | PSPPH_0516 | conserved hypothetical protein | chromosome | CDS | 601889 | 1446 | + | 0.602351 |
| NA | PSPPH_5087 | transcriptional regulator, GntR family | chromosome | CDS | 5771524 | 738 | + | 0.586721 |
| NA | PSPPH_0158 | acetyltransferase, GNAT family | chromosome | CDS | 185495 | 474 | + | 0.578059 |
| NA | PSPPH_2693 | transcriptional regulator, LysR family | chromosome | CDS | 3120156 | 957 | + | 0.597701 |
| NA | PSPPH_3294 | DNA-binding heavy metal response regulator | chromosome | CDS | 3817918 | 690 | + | 0.610145 |
| NA | PSPPH_2800 | transcriptional regulator, PbsX family | chromosome | CDS | 3241093 | 237 | - | 0.50211 |
| NA | PSPPH_4238 | transcriptional regulator, LuxR family, autoinducer-regulated | chromosome | CDS | 4834587 | 765 | + | 0.571242 |
| NA | PSPPH_3079 | transcriptional regulator, LysR family | chromosome | CDS | 3576871 | 909 | + | 0.591859 |
| NA | PSPPH_3030 | lipoprotein, putative | chromosome | CDS | 3518894 | 771 | + | 0.608301 |
| NA | PSPPH_0735 | transcriptional regulator, TetR family | chromosome | CDS | 860746 | 801 | - | 0.556804 |
| NA | PSPPH_3486 | transcriptional regulator | chromosome | CDS | 4025939 | 729 | - | 0.570645 |
| NA | PSPPH_3263 | acetyltransferase, GNAT family | chromosome | CDS | 3782162 | 483 | - | 0.546584 |
| NA | PSPPH_4255 | DNA-binding response regulator, Fis family | chromosome | CDS | 4855631 | 564 | - | 0.615248 |
| NA | PSPPH_1651 | transcriptional regulator, TetR family | chromosome | CDS | 1912407 | 663 | + | 0.577677 |
| NA | PSPPH_A0062 | LysR-family transcription regulator SinR | large plasmid | CDS | 50672 | 999 | + | 0.523524 |
| NA | PSPPH_3220 | DNA-binding response regulator, LuxR family | chromosome | CDS | 3731449 | 663 | + | 0.60181 |
| NA | PSPPH_2152 | conserved domain protein | chromosome | CDS | 2506776 | 792 | + | 0.597222 |
| NA | PSPPH_4920 | conserved hypothetical protein | chromosome | CDS | 5592889 | 426 | - | 0.568075 |
| NA | PSPPH_3798 | transcriptional regulator, LysR family | chromosome | CDS | 4349926 | 927 | + | 0.590075 |
| NA | PSPPH_3618 | transcriptional regulator, LysR family | chromosome | CDS | 4165953 | 909 | - | 0.621562 |
| NA | PSPPH_2424 | hypothetical protein | chromosome | CDS | 2802118 | 522 | + | 0.605364 |
| NA | PSPPH_1960 | transcriptional regulator, IclR family | chromosome | CDS | 2307837 | 810 | + | 0.618519 |
| NA | PSPPH_0141 | transcriptional regulator, LysR family | chromosome | CDS | 167840 | 882 | - | 0.613379 |
| NA | PSPPH_0411 | transcriptional regulator, LysR family | chromosome | CDS | 475491 | 894 | + | 0.604027 |
| NA | PSPPH_3593 | PspA/IM30 family protein | chromosome | CDS | 4138883 | 708 | - | 0.594633 |
| NA | PSPPH_4646 | transcriptional regulator, AraC family | chromosome | CDS | 5284409 | 804 | - | 0.610696 |
| NA | PSPPH_2305 | transcriptional regulator, TetR family | chromosome | CDS | 2672504 | 627 | - | 0.583732 |
| NA | PSPPH_0442 | malonate utilization transcriptional regulator | chromosome | CDS | 502758 | 927 | - | 0.591154 |
| NA | PSPPH_2337 | sigma-54 dependent transcriptional regulator | chromosome | CDS | 2710268 | 1932 | + | 0.606108 |
| NA | PSPPH_5027 | acetyltransferase, GNAT family | chromosome | CDS | 5695972 | 858 | - | 0.601399 |
| NA | PSPPH_4354 | ATP-dependent RNA helicase rhlE, putative | chromosome | CDS | 4976879 | 1353 | - | 0.597931 |
| NA | PSPPH_4730 | transcriptional repressor, LacI family | chromosome | CDS | 5367633 | 1173 | - | 0.618073 |
| NA | PSPPH_3004 | transcriptional regulator, GntR family | chromosome | CDS | 3487683 | 783 | - | 0.606641 |
| NA | PSPPH_2454 | nitrogen assimilation regulatory protein Nac, putative | chromosome | CDS | 2837035 | 912 | + | 0.605263 |
| NA | PSPPH_2859 | Predicted transcriptional regulators | chromosome | CDS | 3306653 | 429 | - | 0.601399 |
| NA | PSPPH_2631 | transcriptional regulator, LysR family | chromosome | CDS | 3036058 | 930 | - | 0.587097 |
| NA | PSPPH_2300 | transcriptional regulator, LysR family | chromosome | CDS | 2666597 | 879 | - | 0.592719 |
| NA | PSPPH_0312 | sigma-54-binding protein | chromosome | CDS | 353955 | 951 | + | 0.610936 |
| NA | PSPPH_2004 | DNA-binding response regulator | chromosome | CDS | 2352536 | 750 | - | 0.614667 |
| NA | PSPPH_1259 | transcriptional regulatory protein | chromosome | CDS | 1465584 | 918 | + | 0.590414 |
| NA | PSPPH_2774 | transcriptional regulator, AraC family | chromosome | CDS | 3211488 | 1068 | - | 0.57397 |
| NA | PSPPH_2995 | DNA-binding response regulator | chromosome | CDS | 3477441 | 675 | - | 0.576296 |
| NA | PSPPH_3170 | DNA-binding protein | chromosome | CDS | 3677851 | 570 | - | 0.607018 |
| NA | PSPPH_2448 | transcriptional regulator, TetR family | chromosome | CDS | 2829007 | 573 | - | 0.589878 |
| NA | PSPPH_2214 | possible transcriptional regulator, TetR family | chromosome | CDS | 2571221 | 546 | - | 0.611722 |
| NA | PSPPH_2301 | transcriptional regulator, LysR family | chromosome | CDS | 2667568 | 909 | - | 0.589659 |
| NA | PSPPH_2478 | DNA-binding protein | chromosome | CDS | 2861152 | 612 | + | 0.578431 |
| NA | PSPPH_0486 | transcriptional regulator, GntR family | chromosome | CDS | 554124 | 666 | - | 0.587087 |
| NA | PSPPH_0642 | DNA-binding response regulator, LuxR family | chromosome | CDS | 760104 | 630 | + | 0.592063 |
| NA | PSPPH_4419 | DNA binding response regulator, LuxR family | chromosome | CDS | 5044416 | 777 | + | 0.545689 |
| NA | PSPPH_2984 | transcriptional regulator, AraC family | chromosome | CDS | 3465328 | 390 | + | 0.530769 |
| NA | PSPPH_4822 | transcriptional regulator, ArsR family | chromosome | CDS | 5474405 | 996 | + | 0.608434 |
| NA | PSPPH_0406 | transcriptional regulator, RpiR family | chromosome | CDS | 469621 | 861 | - | 0.632985 |
| NA | PSPPH_B0051 | transcriptional regulator, GntR family | small plasmid | CDS | 45733 | 273 | + | 0.589744 |
| NA | PSPPH_3244 | transcriptional regulator, TetR family | chromosome | CDS | 3759301 | 615 | + | 0.585366 |
| NA | PSPPH_2555 | transcriptional regulator, LysR family | chromosome | CDS | 2947423 | 912 | + | 0.60636 |
| NA | PSPPH_2747 | RNA polymerase sigma-70 factor, ECF subfamily | chromosome | CDS | 3179070 | 540 | + | 0.596296 |
| NA | PSPPH_0218 | transcriptional regulator, GntR family/aminotransferase, classes I and II family protein | chromosome | CDS | 256502 | 1422 | - | 0.610408 |
| NA | PSPPH_2473 | transcriptional regulator VanR, putative | chromosome | CDS | 2856412 | 669 | + | 0.606876 |
| NA | PSPPH_2142 | transcriptional regulator, MerR family | chromosome | CDS | 2498091 | 357 | + | 0.563025 |
| NA | PSPPH_4828 | DNA-binding heavy metal response regulator | chromosome | CDS | 5481097 | 675 | - | 0.577778 |
| NA | PSPPH_4127 | transcriptional regulator, AraC family | chromosome | CDS | 4712494 | 1005 | + | 0.58806 |
| NA | PSPPH_2983 | transcriptional regulator, GntR family/aminotransferase, classes I and II family protein | chromosome | CDS | 3463503 | 1410 | + | 0.613475 |
| NA | PSPPH_2553 | transcriptional regulator, LysR family | chromosome | CDS | 2945322 | 879 | + | 0.602958 |
| NA | PSPPH_4611 | transcriptional activator, putative, Baf family | chromosome | CDS | 5245139 | 750 | - | 0.56 |
| NA | PSPPH_0226 | DNA-binding protein | chromosome | CDS | 263696 | 549 | + | 0.581056 |
| NA | PSPPH_4673 | transcriptional regulator, Cro/CI family | chromosome | CDS | 5310339 | 732 | + | 0.581967 |
| NA | PSPPH_1771 | transcriptional regulator, GntR family | chromosome | CDS | 2068454 | 753 | + | 0.598938 |
| NA | PSPPH_0893 | acyltransferase family protein | chromosome | CDS | 1065358 | 189 | - | 0.52381 |
| NA | PSPPH_0974 | transcriptional activator RfaH | chromosome | CDS | 1161495 | 579 | - | 0.443869 |
| NA | PSPPH_2407 | transcriptional regulator, TetR family | chromosome | CDS | 2783830 | 636 | + | 0.591195 |
| NA | PSPPH_1421 | ATP-dependent helicase hepA , putative | chromosome | CDS | 1648219 | 2847 | - | 0.620653 |
| NA | PSPPH_2055 | transcriptional regulator, GntR family | chromosome | CDS | 2408126 | 705 | + | 0.588652 |
| NA | PSPPH_1617 | transcriptional regulator, MarR family | chromosome | CDS | 1876766 | 453 | - | 0.631347 |
| NA | PSPPH_1233 | transcriptional regulator, GntR family | chromosome | CDS | 1440877 | 687 | - | 0.56623 |
| NA | PSPPH_4788 | transcriptional reguator, TetR family | chromosome | CDS | 5434180 | 663 | - | 0.542986 |
| NA | PSPPH_4622 | transcriptional regulator, TetR family | chromosome | CDS | 5258483 | 663 | + | 0.577677 |
| NA | PSPPH_4765 | RNA polymerase sigma-70 family protein | chromosome | CDS | 5409325 | 519 | - | 0.608863 |
| NA | PSPPH_2204 | transcriptional regulator, TetR family | chromosome | CDS | 2558914 | 651 | + | 0.571429 |
| NA | PSPPH_3983 | transcriptional regulatory protein | chromosome | CDS | 4549481 | 432 | + | 0.613426 |
| NA | PSPPH_2638 | transcriptional regulator, LysR family | chromosome | CDS | 3047154 | 918 | + | 0.619826 |
| NA | PSPPH_1595 | transcriptional regulator, GntR family | chromosome | CDS | 1849523 | 723 | + | 0.573997 |
| NA | PSPPH_1762 | transcriptional regulator, AsnC family | chromosome | CDS | 2060168 | 519 | + | 0.564547 |
| NA | PSPPH_1441 | conserved hypothetical protein | chromosome | CDS | 1682587 | 411 | - | 0.608272 |
| NA | PSPPH_1169 | sigma-54 dependent transcriptional regulator TyrR, putative | chromosome | CDS | 1372728 | 1509 | - | 0.606362 |
| NA | PSPPH_3014 | transcriptional regulator, LysR family | chromosome | CDS | 3499946 | 930 | + | 0.615054 |
| NA | PSPPH_2295 | transcriptional regulator, LysR family | chromosome | CDS | 2662831 | 903 | - | 0.598007 |
| NA | PSPPH_3453 | DNA-binding response regulator QseB, putative | chromosome | CDS | 3988474 | 663 | + | 0.630468 |
| NA | PSPPH_2338 | LacI-family transcription regulator | chromosome | CDS | 2712206 | 1050 | - | 0.60381 |
| NA | PSPPH_0286 | transcriptional regulator, GntR family | chromosome | CDS | 329239 | 708 | + | 0.59887 |
| NA | PSPPH_1680 | sigma-54 dependent transcriptional regulator | chromosome | CDS | 1943175 | 1854 | - | 0.590615 |
| NA | PSPPH_3779 | cold shock domain family protein | chromosome | CDS | 4329114 | 222 | + | 0.563063 |
| NA | PSPPH_2432 | transcriptional regulator, MarR family | chromosome | CDS | 2813616 | 489 | - | 0.586912 |
| NA | PSPPH_1951 | transcriptional regulator, LysR family | chromosome | CDS | 2297618 | 870 | - | 0.591954 |
| NA | PSPPH_1195 | DNA-binding heavy metal response regulator | chromosome | CDS | 1403490 | 678 | - | 0.619469 |
| NA | PSPPH_0514 | lipopolysaccharide core biosynthesis protein, putative | chromosome | CDS | 600379 | 735 | + | 0.585034 |
| NA | PSPPH_1760 | Ribbon-helix-helix protein, copG family domain protein | chromosome | CDS | 2058578 | 240 | - | 0.5625 |
| NA | PSPPH_B0005 | transcriptional regulator, Cro/CI family | small plasmid | CDS | 3873 | 297 | - | 0.521886 |
| NA | PSPPH_5193 | transcriptional regulator, LacI family | chromosome | CDS | 5894822 | 993 | + | 0.579053 |
| NA | PSPPH_1615 | autoinducer transcriptional regulator AhlR | chromosome | CDS | 1874627 | 702 | - | 0.524217 |
| algQ | PSPPH_0061 | alginate regulator AlgQ | chromosome | CDS | 63528 | 474 | - | 0.582278 |
| algR | PSPPH_0069 | alginate biosynthesis regulatory protein AlgR | chromosome | CDS | 69280 | 747 | - | 0.589023 |
| argR | PSPPH_3522 | transcriptional regulator ArgR | chromosome | CDS | 4061142 | 1056 | - | 0.616477 |
| baeS1 | PSPPH_2376 | DNA-binding response regulator BaeS | chromosome | CDS | 2754672 | 684 | - | 0.608187 |
| betI | PSPPH_4768 | transcriptional regulator BetI | chromosome | CDS | 5413552 | 594 | - | 0.592593 |
| cadR | PSPPH_4870 | Cd(II)/Pb(II)-responsive transcriptional regulator | chromosome | CDS | 5539052 | 447 | + | 0.612975 |
| capA | PSPPH_2133 | cold shock protein CapA | chromosome | CDS | 2489988 | 213 | - | 0.497653 |
| capB | PSPPH_1380 | cold shock protein CapB | chromosome | CDS | 1602035 | 210 | - | 0.466667 |
| colR | PSPPH_4075 | DNA-binding response regulator ColR | chromosome | CDS | 4657579 | 684 | - | 0.616959 |
| cpxR | PSPPH_1460 | DNA-binding response regulator CpxR | chromosome | CDS | 1702915 | 690 | + | 0.614493 |
| cspD | PSPPH_3099 | cold shock domain protein CspD | chromosome | CDS | 3596372 | 285 | + | 0.501754 |
| cueR | PSPPH_4644 | Cu(I)-responsive transcriptional regulator | chromosome | CDS | 5282678 | 399 | + | 0.611529 |
| cysB | PSPPH_2048 | transcriptional regulator CysB | chromosome | CDS | 2400667 | 975 | + | 0.575385 |
| dbpA | PSPPH_0506 | ATP-independent RNA helicase DbpA | chromosome | CDS | 586776 | 1440 | - | 0.608333 |
| fis | PSPPH_4448 | DNA-binding protein Fis | chromosome | CDS | 5080910 | 321 | + | 0.548287 |
| fliA | PSPPH_3363 | RNA polymerase sigma factor for flagellar operon | chromosome | CDS | 3890884 | 720 | - | 0.563889 |
| fruR | PSPPH_0846 | fructose transport system repressor FruR | chromosome | CDS | 1009492 | 996 | - | 0.591365 |
| gacA | PSPPH_2328 | response regulator, DNA binding component GacA | chromosome | CDS | 2703496 | 645 | + | 0.555039 |
| glpR | PSPPH_3900 | glycerol-3-phosphate regulon repressor | chromosome | CDS | 4458627 | 756 | + | 0.572751 |
| gltR | PSPPH_1179 | DNA-binding response regulator GltR | chromosome | CDS | 1384977 | 738 | + | 0.589431 |
| gntR | PSPPH_3257 | gluconate utilization system GNT-I transcriptional repressor | chromosome | CDS | 3775280 | 1017 | - | 0.628319 |
| greA | PSPPH_4201 | transcription elongation factor GreA | chromosome | CDS | 4787731 | 477 | - | 0.542977 |
| greB1 | PSPPH_2036 | transcription elongation factor GreB | chromosome | CDS | 2388809 | 474 | + | 0.563291 |
| greB2 | PSPPH_4292 | transcription elongation factor GreB | chromosome | CDS | 4899252 | 498 | + | 0.600402 |
| hexR | PSPPH_1187 | transcriptional regulator HexR | chromosome | CDS | 1395324 | 867 | - | 0.615917 |
| hrpL | PSPPH_1294 | RNA polymerase sigma factor HrpL | chromosome | CDS | 1505662 | 555 | + | 0.536937 |
| hutC | PSPPH_0349 | histidine utilization repressor | chromosome | CDS | 396655 | 750 | - | 0.624 |
| iciA | PSPPH_4062 | chromosome initiation inhibitor | chromosome | CDS | 4643450 | 900 | - | 0.625556 |
| iclR | PSPPH_3247 | transcriptional regulator, IclR family | chromosome | CDS | 3762672 | 792 | + | 0.616162 |
| iscR | PSPPH_1308 | iron-sulfur cluster assembly transcription factor IscR | chromosome | CDS | 1519659 | 492 | + | 0.577236 |
| kdpE | PSPPH_2022 | KDP operon transcriptional regulatory protein kdpE | chromosome | CDS | 2375633 | 693 | + | 0.607504 |
| lexA1 | PSPPH_2677 | LexA repressor | chromosome | CDS | 3098421 | 618 | + | 0.61165 |
| lexA2 | PSPPH_3203 | LexA repressor | chromosome | CDS | 3714293 | 609 | + | 0.577997 |
| lrp | PSPPH_0222 | leucine-responsive regulatory protein | chromosome | CDS | 260137 | 489 | - | 0.576687 |
| marR | PSPPH_3555 | multiple antibiotic resistance operon repressor MarR | chromosome | CDS | 4091440 | 489 | - | 0.586912 |
| metR | PSPPH_3911 | transcriptional regulator MetR | chromosome | CDS | 4471037 | 918 | + | 0.625272 |
| mexT | PSPPH_2309 | transcriptional regulator MexT | chromosome | CDS | 2677225 | 915 | - | 0.614208 |
| mfd | PSPPH_1851 | transcription-repair coupling factor | chromosome | CDS | 2148159 | 3453 | - | 0.628729 |
| mltR | PSPPH_2597 | transcriptional activator MltR | chromosome | CDS | 2993078 | 906 | - | 0.547461 |
| nusA | PSPPH_4190 | N utilization substance protein A | chromosome | CDS | 4778625 | 1482 | - | 0.540486 |
| nusB | PSPPH_4503 | N utilization substance protein B | chromosome | CDS | 5137403 | 498 | - | 0.592369 |
| nusG | PSPPH_4604 | transcription termination/antitermination factor NusG | chromosome | CDS | 5243077 | 534 | - | 0.531835 |
| ompR | PSPPH_0246 | DNA-binding response regulator OmpR | chromosome | CDS | 286240 | 741 | + | 0.611336 |
| oxyR | PSPPH_0190 | oxidative stress regulatory protein OxyR | chromosome | CDS | 228991 | 924 | - | 0.595238 |
| parB | PSPPH_5215 | chromosome partitioning protein ParB | chromosome | CDS | 5918183 | 873 | - | 0.610538 |
| pcaQ | PSPPH_2095 | pca operon transcription factor PcaQ | chromosome | CDS | 2453950 | 930 | + | 0.619355 |
| pcaR | PSPPH_4020 | Pca regulon regulatory protein PcaR | chromosome | CDS | 4594980 | 843 | - | 0.59312 |
| phaD | PSPPH_0376 | transcriptional regulator PhaD | chromosome | CDS | 428251 | 615 | - | 0.560976 |
| phhR | PSPPH_3530 | transcriptional regulator PhhR | chromosome | CDS | 4069564 | 1581 | - | 0.609108 |
| phnF | PSPPH_2937 | phosphonate metabolism transcriptional regulator PhnF | chromosome | CDS | 3408004 | 735 | - | 0.632653 |
| phoB | PSPPH_5114 | phosphate regulon transcriptional regulatory protein PhoB | chromosome | CDS | 5799449 | 690 | + | 0.589855 |
| phoP | PSPPH_3730 | DNA-binding response regulator PhoP | chromosome | CDS | 4278229 | 678 | - | 0.60472 |
| pobR | PSPPH_3431 | transcriptional regulator PobR | chromosome | CDS | 3966341 | 870 | - | 0.588506 |
| psrA | PSPPH_3202 | transcriptional regulator PsrA | chromosome | CDS | 3713318 | 717 | - | 0.584379 |
| rbsR | PSPPH_2128 | ribose operon repressor | chromosome | CDS | 2485626 | 1017 | + | 0.60472 |
| recG | PSPPH_0189 | ATP-dependent DNA helicase RecG | chromosome | CDS | 226904 | 2076 | - | 0.623796 |
| relA | PSPPH_3716 | GTP pyrophosphokinase | chromosome | CDS | 4261708 | 2235 | - | 0.599105 |
| rfaH | PSPPH_3145 | transcriptional activator RfaH | chromosome | CDS | 3648700 | 513 | + | 0.584795 |
| rfaP | PSPPH_0513 | lipopolysaccharide kinase RfaP | chromosome | CDS | 599573 | 807 | + | 0.614622 |
| rhlB | PSPPH_1128 | ATP-dependent RNA helicase RhlB | chromosome | CDS | 1326818 | 1449 | - | 0.596963 |
| rho | PSPPH_0288 | transcription termination factor Rho | chromosome | CDS | 330629 | 1260 | + | 0.561111 |
| rnc | PSPPH_3948 | ribonuclease III | chromosome | CDS | 4510505 | 690 | - | 0.601449 |
| rnk | PSPPH_5012 | regulator of nucleoside diphosphate kinase | chromosome | CDS | 5678186 | 408 | + | 0.607843 |
| rnr | PSPPH_0574 | ribonuclease R | chromosome | CDS | 673718 | 2634 | + | 0.58694 |
| rpoA | PSPPH_4567 | DNA-directed RNA polymerase, alpha subunit | chromosome | CDS | 5214170 | 1002 | - | 0.552894 |
| rpoB | PSPPH_4599 | DNA-directed RNA polymerase, beta subunit | chromosome | CDS | 5236390 | 4074 | - | 0.559156 |
| rpoC | PSPPH_4598 | DNA-directed RNA polymerase, beta' subunit | chromosome | CDS | 5232126 | 4200 | - | 0.562857 |
| rpoD | PSPPH_0619 | RNA polymerase sigma factor RpoD | chromosome | CDS | 732770 | 1851 | - | 0.56456 |
| rpoE | PSPPH_3955 | RNA polymerase sigma-24 factor RpoE | chromosome | CDS | 4517832 | 582 | - | 0.532646 |
| rpoH | PSPPH_4778 | RNA polymerase sigma-32 factor | chromosome | CDS | 5422376 | 855 | - | 0.578947 |
| rpoN | PSPPH_4151 | RNA polymerase sigma-54 factor RpoN | chromosome | CDS | 4735044 | 1494 | + | 0.575636 |
| rpoS | PSPPH_3809 | RNA polymerase sigma factor RpoS | chromosome | CDS | 4361212 | 1008 | - | 0.551587 |
| rpoZ | PSPPH_0198 | DNA-directed RNA polymerase omega chain (RNAP omegasubunit) (Transcriptase omega chain) (RNA polymerase omega subunit) | chromosome | CDS | 236596 | 342 | - | 0.552632 |
| rstA | PSPPH_3737 | DNA-binding response regulator RstA | chromosome | CDS | 4284455 | 738 | - | 0.627371 |
| rulA | PSPPH_B0003 | ultraviolet light resistance protein A | small plasmid | CDS | 1757 | 426 | + | 0.544601 |
| scpB | PSPPH_3540 | segregation and condensation protein B | chromosome | CDS | 4078843 | 768 | - | 0.619792 |
| spoT | PSPPH_0197 | guanosine-3,5-bis(diphosphate)3-pyrophosphohydro lase | chromosome | CDS | 234430 | 2106 | - | 0.589269 |
| srl | PSPPH_3439 | transcriptional regulator, DeoR family | chromosome | CDS | 3973815 | 771 | + | 0.623865 |
| srmB | PSPPH_1462 | ATP-dependent RNA helicase SrmB | chromosome | CDS | 1705008 | 1338 | + | 0.606129 |
| tctD | PSPPH_3962 | DNA-binding response regulator TctD | chromosome | CDS | 4524607 | 672 | - | 0.620536 |
| tex | PSPPH_0245 | S1 RNA binding domain protein | chromosome | CDS | 283619 | 2322 | - | 0.602067 |
| trpI | PSPPH_0037 | transcriptional regulator TrpI | chromosome | CDS | 42708 | 909 | + | 0.605061 |
| ttgR | PSPPH_4012 | transcriptional regulator TtgR | chromosome | CDS | 4583708 | 645 | - | 0.536434 |
| ttr | PSPPH_4477 | tabtoxin resistance protein | chromosome | CDS | 5113624 | 534 | + | 0.602996 |
| ureG | PSPPH_4498 | urease accessory protein UreG | chromosome | CDS | 5133983 | 618 | + | 0.593851 |
| xre | PSPPH_B0022 | transcriptional regulator, PbsX family | small plasmid | CDS | 18615 | 357 | - | 0.464986 |
| xylR | PSPPH_2357 | xylose operon regluatory protein | chromosome | CDS | 2733268 | 1092 | + | 0.620879 |
|
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