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2024-05-12 12:31:38

Gene list

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COG category: Transcription
Organism: Haemophilus influenzae 86-028NP, 86-028NP

Number of genes found: 99

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Haemophilus influenzae 86-028NP, 86-028NP
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA NTHI0780 putative HTH-type transcriptional regulatorSubName: Full=Putative HTH-type transcriptional regulator; chromosome CDS733788 297 - 0.377104
NA NTHI0273 conserved hypothetical proteinRecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; chromosome CDS256880 915 + 0.404372
NA NTHI1673 probable RNA polymerase sigma factor 24RecName: Full=RNA polymerase sigma factor; chromosome CDS1546843 597 + 0.323283
NA NTHI0229 putative HTH-type transcriptional regulatorSubName: Full=Putative HTH-type transcriptional regulator; chromosome CDS219803 867 - 0.372549
NA NTHI1739 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1591756 279 - 0.383513
NA NTHI0703 conserved hypothetical transcriptional regulatorSubName: Full=Conserved hypothetical transcriptional regulator; chromosome CDS660789 618 - 0.412621
NA NTHI0190 predicted transcriptional regulator containing an HTH domainSubName: Full=Predicted transcriptional regulator containing an HTH domain; chromosome CDS171318 1410 + 0.359574
NA NTHI0415 conserved hypothetical proteinRecName: Full=UPF0301 protein NTHI0415; chromosome CDS400334 561 + 0.388592
NA NTHI0788 putative HTH-type transcriptional regulatorSubName: Full=Putative HTH-type transcriptional regulator; chromosome CDS743054 309 - 0.368932
NA NTHI1549 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1449460 366 + 0.360656
NA NTHI0328 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS315783 507 + 0.358974
NA NTHI0172 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS156281 1107 - 0.377597
NA NTHI1512 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1427218 783 - 0.425287
NA NTHI0936 putative HTH-type transcriptional regulatorSubName: Full=Putative HTH-type transcriptional regulator; chromosome CDS901894 948 + 0.325949
NA NTHI1650 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1533727 729 + 0.301783
NA NTHI1800 putative HTH-type transcriptional regulatorSubName: Full=Putative HTH-type transcriptional regulator; chromosome CDS1647206 918 + 0.337691
NA NTHI1114 predicted transcriptional regulatorRecName: Full=Transcriptional repressor NrdR; chromosome CDS1061515 450 + 0.364444
NA NTHI1517 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1429117 969 + 0.393189
NA NTHI1245 predicted transcriptional regulator, BolA superfamilySubName: Full=Predicted transcriptional regulator, BolA superfamily; chromosome CDS1186323 258 - 0.341085
NA NTHI0476 putative transcription activatorSubName: Full=Putative transcription activator; chromosome CDS450365 648 + 0.419753
NA NTHI1720 predicted transcriptional regulatorSubName: Full=Predicted transcriptional regulator; chromosome CDS1581968 699 - 0.393419
NA NTHI0278 putative HTH-type transcriptional regulatorSubName: Full=Putative HTH-type transcriptional regulator; chromosome CDS261698 408 + 0.377451
NA NTHI1417 HTH-type transcriptional regulatorSubName: Full=HTH-type transcriptional regulator; chromosome CDS1342727 459 - 0.339869
NA NTHI1634 NAD-dependent deacetylase sirtuin 5SubName: Full=NAD-dependent deacetylase sirtuin 5; EC=3.5.1.-; chromosome CDS1517062 846 + 0.397163
NA NTHI1733 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1589196 786 + 0.405852
NA NTHI0420 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS403731 435 - 0.326437
NA NTHI0103 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS94520 1701 + 0.370958
NA NTHI1484 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1409839 534 - 0.441948
NA NTHI1213 conserved hypothetical transcriptional regulatorSubName: Full=Conserved hypothetical transcriptional regulator; chromosome CDS1155000 897 - 0.350056
NA NTHI1628 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1513381 1011 + 0.361029
NA NTHI0403 probable heavy metal dependent transcriptional regulatorSubName: Full=Probable heavy metal dependent transcriptional regulator; chromosome CDS389779 387 + 0.369509
NA NTHI1504 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1423742 366 - 0.434426
NA NTHI1058 hypothetical transcriptional regulatorSubName: Full=Hypothetical transcriptional regulator; chromosome CDS1004961 564 + 0.33156
NA NTHI1526 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1433229 369 + 0.376694
NA NTHI0701 predicted transcriptional accessory proteinSubName: Full=Predicted transcriptional accessory protein; chromosome CDS657835 2313 - 0.422395
NA NTHI0742 HTH-type transcriptional regulatorSubName: Full=HTH-type transcriptional regulator; chromosome CDS701587 408 - 0.294118
NA NTHI1630 NAD-dependent deacetylaseRecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS1514889 711 + 0.424754
NA NTHI0799 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS750742 441 - 0.37415
NA NTHI0499 predicted transcriptional regulatorSubName: Full=Predicted transcriptional regulator; chromosome CDS468235 453 - 0.359823
NA NTHI1713 predicted phage anti-repressor proteinSubName: Full=Predicted phage anti-repressor protein; chromosome CDS1576223 252 - 0.416667
arcA NTHI1047 aerobic respiration control protein ArcASubName: Full=Aerobic respiration control protein ArcA; chromosome CDS993019 711 - 0.361463
argR NTHI1380 arginine repressorRecName: Full=Arginine repressor; chromosome CDS1307830 456 - 0.35307
asnC NTHI0691 regulatory protein AsnCSubName: Full=Regulatory protein AsnC; chromosome CDS649374 453 - 0.344371
cpxR NTHI1004 transcriptional regulatory protein CpxRSubName: Full=Transcriptional regulatory protein CpxR; chromosome CDS951484 684 - 0.352339
cspD NTHI1698 cold shock-like protein CspDSubName: Full=Cold shock-like protein CspD; chromosome CDS1565058 219 + 0.360731
cysB NTHI1371 HTH-type transcriptional regulator CysBSubName: Full=HTH-type transcriptional regulator CysB; chromosome CDS1298015 972 + 0.394033
deaD NTHI0337 Cold-shock DEAD-box protein A homologRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS323624 1842 + 0.418567
dinG NTHI0507 probable ATP-dependent helicaseSubName: Full=Probable ATP-dependent helicase; chromosome CDS474885 1923 + 0.369735
fadR NTHI0550 fatty acid metabolism regulator proteinRecName: Full=Fatty acid metabolism regulator protein; chromosome CDS514319 726 - 0.353994
fis NTHI1152 DNA-binding protein fisRecName: Full=DNA-binding protein Fis; chromosome CDS1093772 300 + 0.376667
fucR NTHI0872 L-fucose operon activatorSubName: Full=L-fucose operon activator; chromosome CDS828336 750 - 0.336
galR NTHI0986 HTH-type transcriptional regulator GalRSubName: Full=HTH-type transcriptional regulator GalR; chromosome CDS936752 999 + 0.386386
gcvA NTHI1365 glycine cleavage system transcriptional activatorSubName: Full=Glycine cleavage system transcriptional activator; chromosome CDS1292076 894 + 0.346756
glpR NTHI0876 glycerol-3-phosphate regulon repressorSubName: Full=Glycerol-3-phosphate regulon repressor; chromosome CDS833352 768 + 0.395833
greA NTHI1658 transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1537369 477 + 0.375262
greB NTHI0702 transcription elongation factor GreBRecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; chromosome CDS660243 477 + 0.402516
hepA NTHI0873 RNA polymerase associated protein homologRecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS829284 2772 + 0.406566
ilvY NTHI0803 HTH-type transcriptional activator IlvYSubName: Full=HTH-type transcriptional activator IlvY; chromosome CDS753449 879 - 0.401593
impA NTHI1588 ImpASubName: Full=ImpA; chromosome CDS1477497 441 - 0.328798
kdkA NTHI0367 3-deoxy-D-manno-octulosonic acid kinaseRecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; chromosome CDS352020 726 - 0.381543
lexA NTHI0905 LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS875380 630 + 0.38254
lrp NTHI1454 leucine-responsive regulatory proteinSubName: Full=Leucine-responsive regulatory protein; chromosome CDS1380755 501 + 0.363273
metJ NTHI0404 Met repressorRecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; chromosome CDS390179 318 - 0.415094
metR NTHI2048 HTH-type transcriptional regulator MetRSubName: Full=HTH-type transcriptional regulator MetR; chromosome CDS1898503 930 - 0.387097
mfd NTHI1906 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1747115 3441 - 0.401918
nanK NTHI0230 putative N-acetylmannosamine kinaseRecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; chromosome CDS220662 903 - 0.399779
narP NTHI0883 nitrate/nitrite response regulator proteinSubName: Full=Nitrate/nitrite response regulator protein; chromosome CDS845045 627 - 0.363636
nusA NTHI1845 transcription elongation protein NusASubName: Full=Transcription elongation protein NusA; chromosome CDS1698909 1488 - 0.386425
nusB NTHI1617 N utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS1504521 435 + 0.393103
nusG NTHI0848 transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS798975 558 + 0.370968
oxyR NTHI0704 hydrogen peroxide-inducible genes activatorSubName: Full=Hydrogen peroxide-inducible genes activator; chromosome CDS661406 906 - 0.400662
phoB NTHI1778 phosphate regulon transcriptional regulatory protein PhoBSubName: Full=Phosphate regulon transcriptional regulatory protein PhoB; chromosome CDS1619709 696 + 0.333333
purR NTHI1404 HTH-type transcriptional repressor PurRRecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; chromosome CDS1334489 1011 - 0.386746
qseB NTHI2016 transcriptional regulatory protein QseBSubName: Full=Transcriptional regulatory protein QseB; chromosome CDS1870737 666 - 0.382883
rbsR NTHI0634 Ribose operon repressorSubName: Full=Ribose operon repressor; chromosome CDS591606 999 + 0.41041
recG NTHI2051 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS1907959 2082 - 0.416427
relA NTHI0452 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; chromosome CDS428571 2232 + 0.405018
rhlB NTHI1057 ATP-dependent RNA helicase RhlBRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS1003463 1257 + 0.404932
rho NTHI0405 transcription termination factor rhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS390740 1263 + 0.404592
rnb NTHI2041 exoribonuclease IIRecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; chromosome CDS1892394 1980 - 0.420202
rnc NTHI0019 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS14339 684 - 0.421053
rpoA NTHI0965 DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS916428 987 + 0.394124
rpoB NTHI0641 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS601287 4032 - 0.396825
rpoC NTHI0640 DNA-directed RNA polymerase beta' chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS596830 4251 - 0.41402
rpoD NTHI0659 RNA polymerase sigma factor RpoDRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS622443 1872 + 0.379274
rpoE NTHI0719 RNA polymerase sigma-E factorRecName: Full=RNA polymerase sigma factor; chromosome CDS670744 570 - 0.398246
rpoH NTHI0376 RNA polymerase sigma-32 factorRecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS364906 846 + 0.400709
rpoZ NTHI2053 DNA-directed RNA polymerase omega chainRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1912224 267 - 0.363296
spoT NTHI2052 guanosine-3',5'-bis 3'-pyrophosphohydrolaseSubName: Full=Guanosine-3,5-bis 3-pyrophosphohydrolase; EC=3.1.7.2; chromosome CDS1910037 2115 - 0.400946
srmB NTHI0546 ATP-dependent RNA helicase SrmBRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS510036 1320 - 0.412121
sxy NTHI0728 DNA transformation protein TfoXSubName: Full=DNA transformation protein TfoX; chromosome CDS683606 654 - 0.314985
trpR NTHI0996 Trp operon repressorRecName: Full=Trp operon repressor homolog; chromosome CDS945558 306 + 0.359477
ttk NTHI1128 TtkRecName: Full=Nucleoid occlusion factor SlmA; chromosome CDS1072442 657 + 0.388128
tyrR NTHI0534 transcriptional regulatory protein TyrRSubName: Full=Transcriptional regulatory protein TyrR; chromosome CDS498494 957 + 0.37931
ureG NTHI0662 urease accessory protein UreGRecName: Full=Urease accessory protein UreG; chromosome CDS627088 678 - 0.438053
uxuR NTHI0064 Uxu operon regulatorSubName: Full=Uxu operon regulator; chromosome CDS56160 801 + 0.310861
vacB NTHI1030 ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS974712 2349 - 0.407833
vapX NTHI0578 VapXSubName: Full=VapX; chromosome CDS539009 192 - 0.401042
xylR NTHI1273 Xylose operon regulatory proteinSubName: Full=Xylose operon regulatory protein; chromosome CDS1206631 1164 - 0.350515