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2024-05-14 04:33:17

Gene list

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COG category: Transcription
Organism: Rickettsia felis URRWXCal2, URRWXCal2; California 2

Number of genes found: 64

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Rickettsia felis URRWXCal2, URRWXCal2; California 2
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RF_0980 AcetyltransferaseSubName: Full=Acetyltransferase; chromosome CDS1038698 420 - 0.261905
NA RF_0157 unknownSubName: Full=Uncharacterized protein; chromosome CDS174157 288 + 0.28125
NA RF_1339 Predicted transcriptional regulatorSubName: Full=Predicted transcriptional regulator; chromosome CDS1426057 282 - 0.308511
NA RF_1207 Transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1270422 279 - 0.286738
NA RF_0784 Predicted acetyltransferaseSubName: Full=Predicted acetyltransferase; chromosome CDS838757 759 - 0.316206
NA RF_1287 Phage-related transcriptional regulatorSubName: Full=Phage-related transcriptional regulator; chromosome CDS1366257 360 + 0.283333
NA RF_pd02 unknownSubName: Full=Uncharacterized protein; pRFdelta CDS1306 369 + 0.257453
NA RF_0202 unknownSubName: Full=Uncharacterized protein; chromosome CDS217095 447 + 0.306488
NA RF_0969 AcetyltransferaseSubName: Full=Acetyltransferase; chromosome CDS1025565 705 + 0.262411
NA RF_0156 unknownSubName: Full=Uncharacterized protein; chromosome CDS172626 1323 + 0.343915
NA RF_0187 Guanosine polyphosphate pyrophosphohydrolases/synthetase-like protein SpoT4SubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetase-like protein SpoT4; chromosome CDS204700 519 - 0.302505
NA RF_0044 Putative transcriptional regulatorRecName: Full=UPF0301 protein RF_0044; chromosome CDS45666 570 - 0.315789
NA RF_p21 unknownSubName: Full=Uncharacterized protein; pRF CDS19286 495 - 0.307071
NA RF_1230 unknownSubName: Full=Uncharacterized protein; chromosome CDS1294907 327 - 0.296636
NA RF_p29 unknownSubName: Full=Uncharacterized protein; pRF CDS28872 663 - 0.349925
NA RF_0116 ParB-like partition proteinsRecName: Full=Probable chromosome-partitioning protein ParB; chromosome CDS133635 861 - 0.277584
NA RF_0537 Transcriptional regulator, AbrB familySubName: Full=Transcriptional regulator, AbrB family; chromosome CDS572700 240 + 0.216667
NA RF_0263 ATP-dependent RNA helicase RhlESubName: Full=ATP-dependent RNA helicase RhlE; chromosome CDS292119 237 + 0.337553
NA RF_1316 Predicted transcriptional regulatorSubName: Full=Predicted transcriptional regulator; chromosome CDS1403162 318 - 0.298742
NA RF_p02 unknownSubName: Full=Uncharacterized protein; pRF CDS1306 369 + 0.257453
NA RF_0354 AcetyltransferaseSubName: Full=Acetyltransferase; chromosome CDS372019 429 + 0.307692
NA RF_0577 unknownSubName: Full=Uncharacterized protein; chromosome CDS613769 492 + 0.27439
NA RF_0264 ATP-dependent RNA helicase RhlESubName: Full=ATP-dependent RNA helicase RhlE; chromosome CDS292303 1062 + 0.336158
NA RF_1397 Prophage antirepressorSubName: Full=Prophage antirepressor; chromosome CDS1480726 825 - 0.340606
NA RF_0112 unknownSubName: Full=Uncharacterized protein; chromosome CDS125851 4071 - 0.29747
NA RF_0838 unknownSubName: Full=Uncharacterized protein; chromosome CDS884506 1683 + 0.246583
NA RF_0033 Transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS34413 534 + 0.35206
NA RF_0416 unknownSubName: Full=Uncharacterized protein; chromosome CDS436985 336 + 0.303571
NA RF_0875 Putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS932581 429 + 0.27972
NA RF_1201 unknownSubName: Full=Uncharacterized protein; chromosome CDS1267188 495 + 0.319192
cspA RF_0262 Cold shock-like proteinRecName: Full=Cold shock-like protein CspA; chromosome CDS291256 213 + 0.347418
czcR RF_0056 Transcriptional activator protein CzcRSubName: Full=Transcriptional activator protein CzcR; chromosome CDS57613 714 + 0.336134
fic RF_1308 FicSubName: Full=Fic; chromosome CDS1396264 975 - 0.349744
greA RF_1360 Transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1451285 579 + 0.321244
hipB RF_0726 Predicted transcriptional regulatorSubName: Full=Predicted transcriptional regulator; chromosome CDS788512 393 - 0.312977
iscR RF_0847 Iron-sulfur cluster assembly transcription factor IscRSubName: Full=Iron-sulfur cluster assembly transcription factor IscR; chromosome CDS895210 420 - 0.314286
mfd RF_0367 Transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS384963 3429 + 0.324876
nusA RF_0872 N utilization substance protein A, transcription termination factor NusASubName: Full=N utilization substance protein A, transcription termination factor NusA; chromosome CDS928995 1512 - 0.332011
nusB RF_1119 N utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS1186280 471 - 0.286624
nusG RF_1151 Transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS1226264 579 - 0.319516
ompR RF_0658 PetR proteinSubName: Full=PetR protein; chromosome CDS706279 681 - 0.303965
parB RF_p35 ParB-like nuclease domainSubName: Full=ParB-like nuclease domain; pRF CDS34391 759 - 0.364954
recG RF_0378 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS399211 2124 + 0.373823
rho RF_0765 Transcription termination factorRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS822398 1377 + 0.358025
rnc RF_1176 Ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS1246596 678 - 0.325959
rpoA RF_0302 DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS317744 1023 + 0.318671
rpoB RF_1146 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1218639 4122 - 0.351286
rpoC RF_1145 DNA-directed RNA polymerase beta prime chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1214318 4119 - 0.367079
rpoD RF_1357 RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS1446875 1908 - 0.337002
rpoH RF_0493 RNA polymerase sigma-32 factorRecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS525904 882 - 0.326531
rpoZ RF_0944 DNA-directed RNA polymerase omega chainRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1002680 381 - 0.317585
spoT1 RF_0450 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS480073 702 + 0.31339
spoT10 RF_0968 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS1024855 615 - 0.294309
spoT11 RF_0204 Guanosine polyphosphate pyrophosphohydrolases/synthetases-like proteinSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases-like protein; chromosome CDS218905 606 + 0.306931
spoT12 RF_0410 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS431261 405 + 0.274074
spoT13 RF_0381 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologRecName: Full=Putative ankyrin repeat protein RF_0381; chromosome CDS404476 3540 + 0.298588
spoT15 RF_0384 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS409542 708 + 0.285311
spoT2 RF_0508 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS542439 720 + 0.276389
spoT3 RF_0953 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS1012478 690 + 0.305797
spoT5 RF_0305 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS320871 423 + 0.345154
spoT6 RF_0380 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS403887 504 + 0.291667
spoT7 RF_0438 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS465405 732 + 0.337432
spoT8 RF_0440 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS467626 717 + 0.283124
spoT9 RF_0884 Guanosine polyphosphate pyrophosphohydrolases/synthetases homologSubName: Full=Guanosine polyphosphate pyrophosphohydrolases/synthetases homolog; chromosome CDS941605 672 + 0.31994