Gene list
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COG category: Transcription
Organism: Silicibacter pomeroyi DSS-3, DSS-3
Number of genes found: 368
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| Silicibacter pomeroyi DSS-3, DSS-3 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | SPO3595 | transcriptional regulator, AraC family | chromosome | CDS | 3802852 | 717 | - | 0.680614 |
| NA | SPO0423 | DNA-binding protein, putative | chromosome | CDS | 437092 | 582 | - | 0.659794 |
| NA | SPO3898 | DNA-binding protein, putative | chromosome | CDS | 2052890 | 192 | - | 0.583333 |
| NA | SPO1941 | transcriptional regulator, AraC family | chromosome | CDS | 2070049 | 978 | - | 0.631902 |
| NA | SPOA0306 | S1 RNA binding domain protein | megaplasmid | CDS | 335830 | 2298 | - | 0.684073 |
| NA | SPO2202 | transcriptional regulator, LysR family | chromosome | CDS | 2340667 | 903 | - | 0.658915 |
| NA | SPO1826 | transcriptional regulator, RpiR family | chromosome | CDS | 1945493 | 843 | - | 0.663108 |
| NA | SPO2624 | transcriptional regulator, AsnC family | chromosome | CDS | 2778084 | 456 | + | 0.644737 |
| NA | SPOA0426 | transcriptional regulator, AraC family | megaplasmid | CDS | 473076 | 996 | + | 0.673695 |
| NA | SPO2758 | conserved hypothetical protein | chromosome | CDS | 2948736 | 393 | + | 0.633588 |
| NA | SPO3340 | transcriptional regulator, GntR family | chromosome | CDS | 3541920 | 600 | - | 0.676667 |
| NA | SPO3803 | transcriptional regulator, AraC family | chromosome | CDS | 4017291 | 1032 | - | 0.661822 |
| NA | SPO3579 | transcriptional regulator, MarR family | chromosome | CDS | 3788268 | 450 | + | 0.635556 |
| NA | SPOA0107 | transcriptional regulator, LysR family | megaplasmid | CDS | 107348 | 894 | - | 0.58613 |
| NA | SPO0255 | transcriptional regulator, MarR family | chromosome | CDS | 274505 | 438 | + | 0.648402 |
| NA | SPO0576 | transcriptional regulator, TetR family | chromosome | CDS | 588055 | 630 | - | 0.677778 |
| NA | SPO2094 | actC domain protein | chromosome | CDS | 2232174 | 513 | - | 0.672515 |
| NA | SPO1458 | transcriptional regulator, MarR family | chromosome | CDS | 1528988 | 480 | + | 0.622917 |
| NA | SPO1164 | conserved hypothetical protein | chromosome | CDS | 1214565 | 288 | + | 0.586806 |
| NA | SPO2098 | transcriptional regulator, LysR family | chromosome | CDS | 2235249 | 852 | - | 0.706573 |
| NA | SPO3809 | transcriptional regulator, ArsR family | chromosome | CDS | 4022560 | 696 | - | 0.686782 |
| NA | SPO1368 | transcriptional regulator, AsnC family | chromosome | CDS | 1434245 | 459 | + | 0.688453 |
| NA | SPO0583 | transcriptional regulator, LysR family | chromosome | CDS | 597541 | 882 | - | 0.664399 |
| NA | SPO2369 | DNA-binding response regulator, LuxR family | chromosome | CDS | 2513756 | 663 | + | 0.607843 |
| NA | SPO0467 | transcriptional regulator, GntR family | chromosome | CDS | 474743 | 711 | - | 0.686357 |
| NA | SPO0605 | transcriptional regulator, MarR family | chromosome | CDS | 623756 | 453 | - | 0.607064 |
| NA | SPO3470 | transcriptional regulator, GntR family | chromosome | CDS | 3673824 | 681 | + | 0.610866 |
| NA | SPO3192 | transcriptional regulator, LysR family | chromosome | CDS | 3404052 | 873 | + | 0.665521 |
| NA | SPO2622 | acetyltransferase, GNAT family | chromosome | CDS | 2776814 | 516 | + | 0.633721 |
| NA | SPO1660 | transcriptional regulator, AraC family | chromosome | CDS | 1768418 | 807 | - | 0.707559 |
| NA | SPO2471 | acetyltransferase, GNAT family | chromosome | CDS | 2622970 | 450 | + | 0.686667 |
| NA | SPO2961 | transcriptional regulator, LysR family | chromosome | CDS | 3160726 | 879 | - | 0.647327 |
| NA | SPOA0417 | transcriptional regulator, GntR family | megaplasmid | CDS | 463866 | 690 | - | 0.665217 |
| NA | SPOA0075 | conserved hypothetical protein | megaplasmid | CDS | 72135 | 594 | + | 0.646465 |
| NA | SPO0389 | transcriptional regulator, AsnC family | chromosome | CDS | 401873 | 462 | - | 0.658009 |
| NA | SPOA0389 | transcriptional regulator, MerR family | megaplasmid | CDS | 438569 | 438 | + | 0.664384 |
| NA | SPO2576 | transcriptional regulator, TetR family | chromosome | CDS | 2728313 | 618 | - | 0.647249 |
| NA | SPO2575 | DNA-binding response regulator, LuxR family | chromosome | CDS | 2727711 | 651 | + | 0.643625 |
| NA | SPOA0284 | transcriptional regulator, LysR family | megaplasmid | CDS | 313162 | 891 | + | 0.666667 |
| NA | SPO3462 | flagellar hook-length control protein | chromosome | CDS | 3664298 | 2478 | + | 0.640839 |
| NA | SPO1369 | transcriptional regulator, GntR family | chromosome | CDS | 1434700 | 702 | - | 0.650997 |
| NA | SPO2189 | transcriptional regulator, AsnC family | chromosome | CDS | 2326570 | 465 | - | 0.6 |
| NA | SPOA0423 | transcriptional regulator, TetR family | megaplasmid | CDS | 469019 | 567 | + | 0.611993 |
| NA | SPO1375 | transcriptional regulator, GntR family | chromosome | CDS | 1441145 | 651 | + | 0.668203 |
| NA | SPO1367 | transcriptional regulator, AsnC family | chromosome | CDS | 1433793 | 456 | + | 0.649123 |
| NA | SPOA0314 | transcriptional regulator, LysR family | megaplasmid | CDS | 349404 | 867 | + | 0.582468 |
| NA | SPO3126 | sigma factor regulator PrtR, putative | chromosome | CDS | 3334509 | 747 | + | 0.685408 |
| NA | SPO0768 | transcriptional regulator, IclR family | chromosome | CDS | 799573 | 774 | - | 0.684755 |
| NA | SPO2408 | hypothetical protein | chromosome | CDS | 2559208 | 636 | - | 0.591195 |
| NA | SPO3454 | hypothetical protein | chromosome | CDS | 3657836 | 702 | + | 0.626781 |
| NA | SPO1434 | transcriptional regulator, AraC family | chromosome | CDS | 1506043 | 990 | - | 0.711111 |
| NA | SPO1227 | conserved hypothetical protein | chromosome | CDS | 1290725 | 351 | + | 0.564103 |
| NA | SPO0743 | transcriptional regulator, TetR family | chromosome | CDS | 773415 | 597 | + | 0.616415 |
| NA | SPO1842 | transcriptional regulator, GntR family | chromosome | CDS | 1960441 | 777 | + | 0.676963 |
| NA | SPOA0344 | transcriptional regulator, LysR family | megaplasmid | CDS | 386564 | 945 | - | 0.622222 |
| NA | SPO1974 | autoinducer-binding transcriptional regulator, LuxR family | chromosome | CDS | 2103755 | 750 | + | 0.608 |
| NA | SPO2063 | acetyltransferase, GNAT family | chromosome | CDS | 2194867 | 507 | + | 0.680473 |
| NA | SPO3298 | DNA-binding response regulator | chromosome | CDS | 3498963 | 708 | + | 0.672316 |
| NA | SPO1902 | transcription regulator, TetR family | chromosome | CDS | 2026599 | 576 | - | 0.621528 |
| NA | SPO1553 | transcriptional regulator, GntR family | chromosome | CDS | 1639494 | 720 | - | 0.638889 |
| NA | SPO1161 | transcriptional regulator, AraC family | chromosome | CDS | 1212347 | 792 | + | 0.691919 |
| NA | SPO2914 | transcriptional regulator, merR family | chromosome | CDS | 3112617 | 402 | + | 0.61194 |
| NA | SPO3545 | transcriptional regulator, TetR family | chromosome | CDS | 3756388 | 558 | + | 0.655914 |
| NA | SPOA0252 | transcriptional regulator, LacI family | megaplasmid | CDS | 276053 | 1026 | + | 0.576998 |
| NA | SPO2602 | transcriptional regulator, RpiR family | chromosome | CDS | 2757005 | 873 | - | 0.631157 |
| NA | SPO2543 | transcriptional regulator, GntR family | chromosome | CDS | 2693584 | 750 | + | 0.610667 |
| NA | SPO1764 | transcriptional regulator, LuxR family | chromosome | CDS | 1883585 | 777 | - | 0.638353 |
| NA | SPO3833 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 4048549 | 2130 | + | 0.682629 |
| NA | SPO3684 | transcriptional regulator, LacI family | chromosome | CDS | 3892715 | 1026 | + | 0.631579 |
| NA | SPO2188 | acetyltransferase, GNAT family | chromosome | CDS | 2325957 | 420 | - | 0.7 |
| NA | SPO0276 | transcriptional regulator, LuxR family | chromosome | CDS | 292054 | 498 | + | 0.656627 |
| NA | SPOA0301 | transcriptional regulator, GntR family | megaplasmid | CDS | 330025 | 720 | + | 0.5625 |
| NA | SPO0965 | acetyltransferase, GNAT family | chromosome | CDS | 1016468 | 891 | + | 0.723906 |
| NA | SPOA0105 | transcriptional regulator, putative | megaplasmid | CDS | 105320 | 375 | - | 0.621333 |
| NA | SPO0233 | transcriptional regulator, AsnC family | chromosome | CDS | 251746 | 429 | + | 0.62704 |
| NA | SPOA0452 | transcriptional regulator, MarR family | megaplasmid | CDS | 111099 | 474 | - | 0.544304 |
| NA | SPOA0038 | transcriptional regulator, LuxR family | megaplasmid | CDS | 33041 | 1176 | - | 0.60119 |
| NA | SPO2631 | transcriptional regulator, AsnC family | chromosome | CDS | 2785776 | 462 | - | 0.608225 |
| NA | SPOA0348 | conserved hypothetical protein | megaplasmid | CDS | 390671 | 546 | + | 0.608059 |
| NA | SPOA0379 | transcriptional regulator, GntR family | megaplasmid | CDS | 425152 | 1473 | + | 0.67685 |
| NA | SPOA0150 | transcriptional regulator, AraC family | megaplasmid | CDS | 161659 | 1038 | - | 0.634875 |
| NA | SPO0615 | conserved domain protein | chromosome | CDS | 633778 | 1134 | + | 0.656967 |
| NA | SPO2704 | transcriptional regulator, AraC family | chromosome | CDS | 2857726 | 1086 | + | 0.642726 |
| NA | SPO0153 | transcriptional regulator, TetR family | chromosome | CDS | 168887 | 588 | - | 0.64966 |
| NA | SPO1780 | transcriptional regulator, TetR family | chromosome | CDS | 1897197 | 618 | - | 0.640777 |
| NA | SPO3301 | transcriptional regulator, LysR family | chromosome | CDS | 3500757 | 867 | - | 0.685121 |
| NA | SPO0904 | leucine-responsive regulatory protein, putative | chromosome | CDS | 959740 | 501 | + | 0.626747 |
| NA | SPO0659 | transcriptional regulator, LysR family | chromosome | CDS | 685171 | 933 | + | 0.640943 |
| NA | SPOA0273 | DNA-binding protein, putative | megaplasmid | CDS | 300585 | 567 | - | 0.636684 |
| NA | SPO0119 | transcriptional regulator, AsnC family | chromosome | CDS | 127691 | 504 | - | 0.577381 |
| NA | SPO1399 | transcriptional regulator, AraC family | chromosome | CDS | 1468642 | 972 | + | 0.702675 |
| NA | SPOA0326 | transcriptional regulator, LysR family | megaplasmid | CDS | 365032 | 885 | + | 0.699435 |
| NA | SPO2238 | transcriptional regulator, LysR family | chromosome | CDS | 2379647 | 933 | + | 0.689175 |
| NA | SPOA0268 | transcriptional regulator, IclR family | megaplasmid | CDS | 294459 | 813 | + | 0.627306 |
| NA | SPO1299 | transcriptional regulator, LysR family | chromosome | CDS | 1363484 | 828 | + | 0.556763 |
| NA | SPO2164 | conserved hypothetical protein | chromosome | CDS | 2301282 | 711 | + | 0.66948 |
| NA | SPO1596 | conserved hypothetical protein | chromosome | CDS | 1691493 | 606 | + | 0.655115 |
| NA | SPOA0056 | DNA-binding protein, putative | megaplasmid | CDS | 50922 | 615 | - | 0.630894 |
| NA | SPOA0164 | transcriptional regulator, GntR family | megaplasmid | CDS | 180424 | 1386 | + | 0.608947 |
| NA | SPO3379 | transcriptional regulator, LysR family | chromosome | CDS | 3581744 | 843 | - | 0.715302 |
| NA | SPO1912 | transcriptional regulator, GntR family | chromosome | CDS | 2033030 | 732 | - | 0.672131 |
| NA | SPOA0387 | transcriptional regulator, LysR family | megaplasmid | CDS | 435270 | 915 | + | 0.644809 |
| NA | SPO3150 | transcriptional regulator, AraC family | chromosome | CDS | 3357794 | 918 | + | 0.718954 |
| NA | SPO1395 | transcriptional regulator, AraC family | chromosome | CDS | 1461711 | 1230 | + | 0.652846 |
| NA | SPOA0289 | transcriptional regulator, AraC family | megaplasmid | CDS | 318870 | 900 | + | 0.691111 |
| NA | SPO3645 | transcriptional regulator, putative | chromosome | CDS | 3847588 | 441 | + | 0.662132 |
| NA | SPO3179 | transcriptional regulator, AsnC family | chromosome | CDS | 3388753 | 459 | + | 0.607843 |
| NA | SPO1584 | transcriptional regulator, AraC family | chromosome | CDS | 1677085 | 990 | + | 0.658586 |
| NA | SPO3315 | transcriptional regulator, LysR family | chromosome | CDS | 3513089 | 930 | - | 0.691398 |
| NA | SPO3080 | transcriptional regulator, TetR family | chromosome | CDS | 3291105 | 582 | - | 0.702749 |
| NA | SPO1148 | transcriptional regulator, GntR family | chromosome | CDS | 1203397 | 1395 | - | 0.623656 |
| NA | SPOA0242 | transcriptional regulator, LacI family | megaplasmid | CDS | 265820 | 1041 | - | 0.585014 |
| NA | SPO0931 | response regulator | chromosome | CDS | 986495 | 720 | - | 0.679167 |
| NA | SPO2581 | DNA-binding protein, putative | chromosome | CDS | 2733470 | 798 | + | 0.616541 |
| NA | SPO1753 | riboflavin biosynthesis protein RibX | chromosome | CDS | 1873443 | 471 | + | 0.600849 |
| NA | SPO3575 | transcriptional regulator, MerR family | chromosome | CDS | 3785026 | 357 | - | 0.638655 |
| NA | SPOA0303 | replication protein, putative | megaplasmid | CDS | 332220 | 1098 | - | 0.643898 |
| NA | SPO1138 | transcriptional regulator, AsnC family | chromosome | CDS | 1194420 | 480 | - | 0.6375 |
| NA | SPO0588 | transcriptional regulator, LysR family | chromosome | CDS | 604264 | 912 | - | 0.662281 |
| NA | SPO0161 | DNA-binding response regulator, LuxR family | chromosome | CDS | 178533 | 615 | - | 0.62439 |
| NA | SPO0566 | transcriptional regulator, TetR family | chromosome | CDS | 567710 | 624 | + | 0.623397 |
| NA | SPO3621 | transcriptional regulator, GntR family | chromosome | CDS | 3825195 | 648 | - | 0.67284 |
| NA | SPO3238 | transcriptional regulator, ArsR family | chromosome | CDS | 3441856 | 342 | + | 0.628655 |
| NA | SPO3100 | conserved hypothetical protein | chromosome | CDS | 3310968 | 744 | - | 0.599462 |
| NA | SPO1690 | transcriptional regulator, GntR family | chromosome | CDS | 1796102 | 1404 | + | 0.660969 |
| NA | SPO1640 | transcriptional regulator, LysR family | chromosome | CDS | 1743226 | 930 | - | 0.615054 |
| NA | SPO3299 | transcriptional regulator, TetR family | chromosome | CDS | 3499657 | 585 | - | 0.664957 |
| NA | SPO3563 | transcriptional regulator, ArsR family | chromosome | CDS | 3777172 | 318 | + | 0.647799 |
| NA | SPOA0261 | transcriptional regulator, GntR family | megaplasmid | CDS | 286995 | 681 | - | 0.580029 |
| NA | SPO3185 | transcriptional regulator, GntR family | chromosome | CDS | 3394736 | 1404 | + | 0.698718 |
| NA | SPO2761 | transcriptional activator, Baf family | chromosome | CDS | 2951606 | 780 | - | 0.617949 |
| NA | SPO0799 | transcriptional regulator, TetR family | chromosome | CDS | 833156 | 663 | + | 0.690799 |
| NA | SPO2171 | transcriptional regulator, LysR family | chromosome | CDS | 2307258 | 924 | + | 0.668831 |
| NA | SPO3262 | transcriptional regulator, MarR family | chromosome | CDS | 3460699 | 459 | + | 0.53159 |
| NA | SPO1767 | acetyltransferase, GNAT family | chromosome | CDS | 1885835 | 483 | + | 0.645963 |
| NA | SPO0033 | transcriptional regulator, LysR family | chromosome | CDS | 32458 | 909 | + | 0.660066 |
| NA | SPO0734 | PaaX domain protein | chromosome | CDS | 762661 | 801 | - | 0.685393 |
| NA | SPO2685 | conserved hypothetical protein | chromosome | CDS | 2836955 | 666 | + | 0.675676 |
| NA | SPO3577 | conserved hypothetical protein | chromosome | CDS | 3786327 | 699 | - | 0.682403 |
| NA | SPO2434 | transcriptional regulator, GntR family | chromosome | CDS | 2585641 | 708 | + | 0.601695 |
| NA | SPO1604 | transcriptional regulator, LysR family | chromosome | CDS | 1700190 | 930 | + | 0.683871 |
| NA | SPOA0427 | transcriptional regulator, ArsR family | megaplasmid | CDS | 474087 | 333 | - | 0.624625 |
| NA | SPO1439 | DNA binding protein, putative | chromosome | CDS | 1510771 | 852 | - | 0.664319 |
| NA | SPOA0159 | transcriptional regulator, LysR family | megaplasmid | CDS | 175095 | 903 | + | 0.694352 |
| NA | SPO1002 | transcriptional regulator, AraC family | chromosome | CDS | 1054075 | 1005 | - | 0.650746 |
| NA | SPO3506 | DNA-binding protein, putative | chromosome | CDS | 3710608 | 570 | - | 0.675439 |
| NA | SPO3125 | RNA polymerase sigma-70 factor, ECF family | chromosome | CDS | 3333994 | 519 | + | 0.709056 |
| NA | SPO1022 | transcriptional regulator, putative | chromosome | CDS | 1072502 | 1299 | + | 0.692071 |
| NA | SPO3841 | transcriptional regulator, TetR family | chromosome | CDS | 4055937 | 618 | - | 0.635922 |
| NA | SPO1853 | transcriptional regulator, TetR family | chromosome | CDS | 1973477 | 642 | - | 0.655763 |
| NA | SPO3551 | acetyltransferase, GNAT family | chromosome | CDS | 3761757 | 474 | - | 0.675106 |
| NA | SPO0481 | acetyltransferase, GNAT family | chromosome | CDS | 485499 | 477 | - | 0.654088 |
| NA | SPOA0060 | transcriptional regulator, AraC family | megaplasmid | CDS | 56564 | 867 | + | 0.690888 |
| NA | SPO3722 | Rrf2 family protein | chromosome | CDS | 3934096 | 519 | - | 0.672447 |
| NA | SPOA0317 | transcriptional regulator, AsnC family | megaplasmid | CDS | 355845 | 459 | - | 0.618736 |
| NA | SPO1961 | transcriptional regulator, IclR family | chromosome | CDS | 2092464 | 771 | - | 0.688716 |
| NA | SPO1393 | Rrf2 family protein | chromosome | CDS | 1458889 | 495 | + | 0.664646 |
| NA | SPOA0149 | transcriptional regulator, GntR family | megaplasmid | CDS | 160318 | 1317 | + | 0.668185 |
| NA | SPO3734 | transcriptional regulator, MerR family | chromosome | CDS | 3946284 | 423 | - | 0.671395 |
| NA | SPOA0143 | transcriptional regulator, IclR family | megaplasmid | CDS | 153574 | 846 | - | 0.652482 |
| NA | SPO0860 | xylose repressor, putative | chromosome | CDS | 911496 | 1197 | - | 0.677527 |
| NA | SPO3044 | transcriptional regulator, LysR family | chromosome | CDS | 3255584 | 1005 | + | 0.619901 |
| NA | SPO2118 | transcriptional regulator, AsnC family | chromosome | CDS | 2253001 | 426 | - | 0.633803 |
| NA | SPO1616 | transcriptional regulator, putative | chromosome | CDS | 1712041 | 891 | - | 0.634119 |
| NA | SPO3668 | transcriptional regulator, LysR family | chromosome | CDS | 3870403 | 918 | + | 0.637255 |
| NA | SPO2068 | DNA-binding protein, putative | chromosome | CDS | 2199868 | 624 | - | 0.637821 |
| NA | SPO0762 | transcriptional regulator, GntR family | chromosome | CDS | 794236 | 651 | + | 0.665131 |
| NA | SPO1824 | transcriptional regulator, LysR family | chromosome | CDS | 1943307 | 873 | + | 0.697595 |
| NA | SPO2025 | iron-sulfur cluster assembly transcription factor IscR, putative | chromosome | CDS | 2152297 | 459 | - | 0.642702 |
| NA | SPO0223 | transcriptional regulator, AsnC family | chromosome | CDS | 242364 | 459 | + | 0.62963 |
| NA | SPO3677 | transcriptional regulator, LysR family | chromosome | CDS | 3886300 | 936 | - | 0.563034 |
| NA | SPO3203 | guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative | chromosome | CDS | 3413869 | 2193 | - | 0.633835 |
| NA | SPO2836 | DNA-binding protein, putative | chromosome | CDS | 3033296 | 792 | + | 0.606061 |
| NA | SPO0980 | transcriptional regulator, LysR family | chromosome | CDS | 1031810 | 960 | - | 0.670833 |
| NA | SPO1086 | transcriptional regulator, TetR family | chromosome | CDS | 1141118 | 582 | - | 0.664948 |
| NA | SPOA0177 | hydrogen peroxide-inducible genes activator, putative | megaplasmid | CDS | 192528 | 693 | - | 0.59596 |
| NA | SPO2465 | conserved hypothetical protein | chromosome | CDS | 2617832 | 540 | - | 0.688889 |
| NA | SPO1425 | transcriptional regulator, AsnC family | chromosome | CDS | 1496619 | 456 | - | 0.635965 |
| NA | SPO0241 | transcriptional regulator, LysR family | chromosome | CDS | 260302 | 930 | + | 0.641935 |
| NA | SPO0978 | CobB | chromosome | CDS | 1030331 | 699 | - | 0.67525 |
| NA | SPO3779 | transcriptional regulator, LysR family | chromosome | CDS | 3991600 | 909 | + | 0.616062 |
| NA | SPO1621 | TfoX domain protein | chromosome | CDS | 1718117 | 351 | - | 0.683761 |
| NA | SPO2860 | transcriptional regulator, LysR family | chromosome | CDS | 3057925 | 885 | + | 0.723164 |
| NA | SPO1265 | DNA-binding protein, putative | chromosome | CDS | 1334366 | 393 | + | 0.666667 |
| NA | SPO1488 | transcriptional regulator, LuxR family | chromosome | CDS | 1560881 | 717 | + | 0.577406 |
| NA | SPO0454 | transcriptional regulator, LysR family | chromosome | CDS | 464569 | 882 | + | 0.646259 |
| NA | SPO3689 | transcriptional regulator, MarR family | chromosome | CDS | 3898392 | 489 | + | 0.635992 |
| NA | SPO1704 | transcriptional regulator, AraC family | chromosome | CDS | 1817549 | 924 | + | 0.583333 |
| NA | SPOA0023 | transcriptional regulator, TetR family | megaplasmid | CDS | 19700 | 657 | - | 0.668189 |
| NA | SPO1120 | conserved hypothetical protein | chromosome | CDS | 1176927 | 756 | + | 0.667989 |
| NA | SPO3388 | transcriptional regulator, TetR family | chromosome | CDS | 3590395 | 624 | - | 0.605769 |
| NA | SPO1583 | DNA-binding protein, putative | chromosome | CDS | 1676294 | 654 | - | 0.59633 |
| NA | SPO3487 | conserved hypothetical protein | chromosome | CDS | 3690925 | 690 | + | 0.669565 |
| NA | SPO1078 | transcriptional regulator, LysR family | chromosome | CDS | 1134438 | 885 | - | 0.706215 |
| NA | SPOA0102 | transcriptional regulator, LuxR family | megaplasmid | CDS | 102382 | 969 | - | 0.616099 |
| NA | SPOA0170 | transcriptional regulator, MarR family | megaplasmid | CDS | 188365 | 543 | - | 0.54512 |
| NA | SPO0168 | transcriptional regulator, TetR family | chromosome | CDS | 188930 | 639 | + | 0.608764 |
| NA | SPO0590 | transcriptional regulator, LacI family | chromosome | CDS | 608479 | 1029 | - | 0.694849 |
| NA | SPOA0165 | transcriptional regulator, LysR family | megaplasmid | CDS | 181865 | 936 | - | 0.601496 |
| NA | SPO3317 | transcriptional regulator, putative | chromosome | CDS | 3515662 | 558 | + | 0.65233 |
| NA | SPO3896 | transcriptional regulator, TetR family | chromosome | CDS | 1845847 | 612 | - | 0.665033 |
| NA | SPO1736 | transcriptional regulator, TetR family | chromosome | CDS | 1854520 | 585 | + | 0.639316 |
| NA | SPO1190 | transcriptional regulator family protein | chromosome | CDS | 1244296 | 363 | - | 0.658402 |
| NA | SPO0225 | transcriptional regulator, putative | chromosome | CDS | 243987 | 513 | - | 0.654971 |
| NA | SPO1090 | DNA-binding protein, putative | chromosome | CDS | 1145243 | 1398 | - | 0.656652 |
| NA | SPO1388 | transcriptional regulator, LuxR family/hydrolase, alpha/beta fold family | chromosome | CDS | 1454801 | 1773 | + | 0.676255 |
| NA | SPO2439 | transcriptional regulator, GntR family | chromosome | CDS | 2591937 | 768 | + | 0.64974 |
| NA | SPO2912 | transcriptional regulator, merR family | chromosome | CDS | 3111714 | 369 | + | 0.620596 |
| NA | SPO3897 | site-specific recombinase, resolvase family | chromosome | CDS | 1837668 | 192 | - | 0.640625 |
| NA | SPO3397 | transcriptional regulator, AraC family | chromosome | CDS | 3600729 | 969 | - | 0.628483 |
| NA | SPO0258 | transcriptional regulator, AraC family | chromosome | CDS | 275937 | 981 | + | 0.651376 |
| NA | SPO2668 | transcriptional regulator, LysR family | chromosome | CDS | 2822841 | 894 | + | 0.634228 |
| NA | SPO1507 | DNA-binding response regulator, LuxR family | chromosome | CDS | 1582986 | 705 | - | 0.649645 |
| NA | SPO0919 | transcriptional regulator, MarR family | chromosome | CDS | 972396 | 474 | + | 0.658228 |
| NA | SPO0353 | NnrU family protein | chromosome | CDS | 367011 | 555 | + | 0.646847 |
| NA | SPO1092 | transcriptional regulator, LysR family | chromosome | CDS | 1147095 | 903 | + | 0.685493 |
| NA | SPO0569 | transcriptional regulator, AsnC family | chromosome | CDS | 573420 | 459 | + | 0.631808 |
| NA | SPO0432 | rrf2 family protein | chromosome | CDS | 447721 | 447 | + | 0.610738 |
| NA | SPO1566 | DNA-binding response regulator, LuxR family | chromosome | CDS | 1656751 | 615 | - | 0.647154 |
| NA | SPOA0446 | transcriptional regulator, LysR family | megaplasmid | CDS | 490624 | 897 | - | 0.691193 |
| NA | SPO2536 | transcriptional regulator, LuxR family | chromosome | CDS | 2686001 | 738 | + | 0.558266 |
| NA | SPOA0338 | transcriptional regulator, LysR family | megaplasmid | CDS | 381777 | 975 | + | 0.582564 |
| NA | SPO3490 | transcriptional regulator, LysR family | chromosome | CDS | 3695536 | 885 | - | 0.675706 |
| NA | SPO1267 | transcriptional regulator, MarR family | chromosome | CDS | 1335135 | 453 | + | 0.615894 |
| NA | SPOA0230 | transcriptional regulator, LysR family | megaplasmid | CDS | 251221 | 918 | - | 0.599129 |
| NA | SPO1872 | transcriptional regulator, LysR family | chromosome | CDS | 1993553 | 936 | - | 0.625 |
| NA | SPO0324 | transcriptional regulator, LysR family | chromosome | CDS | 334529 | 948 | - | 0.644515 |
| NA | SPO3230 | aminotransferase, classes I and II | chromosome | CDS | 3436267 | 1209 | - | 0.667494 |
| NA | SPO3352 | transcriptional regulator, ArsR family | chromosome | CDS | 3550732 | 348 | - | 0.632184 |
| NA | SPO3406 | transcriptional regulator, TetR family | chromosome | CDS | 3608707 | 597 | - | 0.711893 |
| NA | SPOA0392 | RNA polymerase sigma-70 factor, putative | megaplasmid | CDS | 441633 | 639 | + | 0.643192 |
| NA | SPO2959 | DNA-binding protein, putative | chromosome | CDS | 3158885 | 372 | - | 0.615591 |
| NA | SPO3357 | transcriptional regulator, LysR family | chromosome | CDS | 3555752 | 996 | + | 0.669679 |
| NA | SPO3612 | transcriptional regulator, AsnC family | chromosome | CDS | 3817745 | 453 | - | 0.626932 |
| NA | SPO3615 | transcriptional regulator, AraC family | chromosome | CDS | 3819351 | 831 | - | 0.645006 |
| NA | SPO0296 | conserved hypothetical protein | chromosome | CDS | 309710 | 585 | + | 0.635897 |
| NA | SPO0437 | cold shock family protein | chromosome | CDS | 452742 | 207 | - | 0.599034 |
| NA | SPO2447 | acetyltransferase, GNAT family | chromosome | CDS | 2601045 | 525 | + | 0.67619 |
| NA | SPO1217 | DNA-binding protein, putative | chromosome | CDS | 1275144 | 255 | + | 0.635294 |
| NA | SPO2372 | transcriptional regulator, AsnC family | chromosome | CDS | 2516900 | 456 | + | 0.598684 |
| NA | SPO1478 | RNA polymerase sigma-70 factor, ECF family | chromosome | CDS | 1552129 | 636 | + | 0.592767 |
| NA | SPO0141 | DNA binding protein, putative | chromosome | CDS | 155946 | 570 | - | 0.670175 |
| NA | SPO1475 | transcriptional regulator, GntR family | chromosome | CDS | 1549109 | 780 | + | 0.689744 |
| NA | SPO1453 | transcriptional regulator, MarR family | chromosome | CDS | 1524926 | 459 | + | 0.657952 |
| NA | SPO1057 | transcriptional regulator, AraC family | chromosome | CDS | 1108042 | 999 | + | 0.644645 |
| NA | SPO1417 | helicase, putative | chromosome | CDS | 1487460 | 2880 | + | 0.676042 |
| NA | SPO3571 | transcriptional regulator, AraC family | chromosome | CDS | 3782189 | 963 | - | 0.663551 |
| NA | SPO2550 | transcriptional regulator, GntR family | chromosome | CDS | 2700409 | 714 | - | 0.563025 |
| NA | SPO3748 | transcriptional regulator, LysR family | chromosome | CDS | 3959512 | 873 | - | 0.67354 |
| NA | SPO1420 | transcriptional regulator, CarD family | chromosome | CDS | 1491414 | 510 | + | 0.629412 |
| NA | SPOA0186 | Rrf2 family protein | megaplasmid | CDS | 198944 | 483 | + | 0.590062 |
| NA | SPOA0067 | transcriptional regulator, TetR family | megaplasmid | CDS | 66808 | 648 | - | 0.67284 |
| NA | SPO1384 | transcriptional regulator, MarR family | chromosome | CDS | 1451287 | 462 | - | 0.61039 |
| NA | SPO3020 | transcriptional regulator, LysR family | chromosome | CDS | 3221652 | 1638 | - | 0.680098 |
| NA | SPOA0085 | DNA-binding protein, putative | megaplasmid | CDS | 80961 | 219 | - | 0.575342 |
| NA | SPO3240 | transcriptional regulator, LysR family | chromosome | CDS | 3443094 | 879 | - | 0.666667 |
| NA | SPO1040 | hypothetical protein | chromosome | CDS | 1088777 | 615 | + | 0.60813 |
| NA | SPO3037 | DNA-binding response regulator, LysR family | chromosome | CDS | 3247808 | 810 | + | 0.581481 |
| NA | SPO1954 | transcriptional regulator, LysR family | chromosome | CDS | 2083157 | 912 | - | 0.673246 |
| NA | SPO2105 | transcriptional regulator, LysR family | chromosome | CDS | 2241182 | 966 | - | 0.682195 |
| NA | SPO0687 | transcriptional regulator, MarR family | chromosome | CDS | 717071 | 453 | + | 0.593819 |
| NA | SPO2381 | transcriptional regulator, LysR family | chromosome | CDS | 2524849 | 936 | - | 0.58547 |
| NA | SPO0614 | transcriptional regulator, putative | chromosome | CDS | 633393 | 396 | + | 0.585859 |
| NA | SPO1722 | transcriptional regulator, GntR family | chromosome | CDS | 1840901 | 741 | - | 0.609986 |
| NA | SPO0960 | transcriptional regulator, MerR family | chromosome | CDS | 1012299 | 366 | - | 0.674863 |
| NA | SPO2216 | DNA-binding protein, putative | chromosome | CDS | 2356164 | 786 | - | 0.695929 |
| NA | SPO1610 | transcriptional regulator, LuxR family | chromosome | CDS | 1706791 | 792 | + | 0.646465 |
| NA | SPOA0375 | transcriptional regulator, gntR family | megaplasmid | CDS | 419547 | 1464 | + | 0.607924 |
| NA | SPO3704 | DNA-binding/shikimate kinase domain protein | chromosome | CDS | 3915279 | 918 | + | 0.687364 |
| NA | SPO3141 | acetyltransferase, GNAT family | chromosome | CDS | 3349759 | 441 | - | 0.659864 |
| NA | SPO3512 | hypothetical protein | chromosome | CDS | 3722616 | 852 | + | 0.652582 |
| NA | SPOA0259 | transcriptional regulator, LacI family | megaplasmid | CDS | 284124 | 1044 | + | 0.583333 |
| NA | SPO0832 | transcriptional regulator, LysR family | chromosome | CDS | 866161 | 858 | + | 0.67366 |
| NA | SPO0707 | transcriptional regulator, DeoR family | chromosome | CDS | 736566 | 876 | - | 0.64726 |
| NA | SPO0187 | DNA-binding response regulator | chromosome | CDS | 204208 | 666 | + | 0.569069 |
| NA | SPO3592 | transcriptional regulator, LysR family | chromosome | CDS | 3798481 | 906 | + | 0.609272 |
| NA | SPO2656 | transcriptional regulator, LysR family | chromosome | CDS | 2811257 | 891 | - | 0.653199 |
| NA | SPO2010 | transcriptional regulator, LysR family | chromosome | CDS | 2138773 | 969 | + | 0.637771 |
| NA | SPO1233 | hypothetical protein | chromosome | CDS | 1297126 | 3384 | + | 0.537234 |
| NA | SPO1284 | transcriptional regulator, ArsR family | chromosome | CDS | 1348663 | 744 | - | 0.612903 |
| NA | SPO0068 | transcriptional regulator, putative | chromosome | CDS | 71105 | 441 | - | 0.621315 |
| NA | SPO2496 | transcriptional regulator, MerR family | chromosome | CDS | 2644604 | 732 | + | 0.642076 |
| NA | SPO0929 | type II DNA modification methyltransferase, putative | chromosome | CDS | 985559 | 633 | - | 0.631912 |
| NA | SPO2355 | transcriptional regulator, IclR family | chromosome | CDS | 2495995 | 807 | - | 0.628253 |
| NA | SPO2285 | DNA-binding protein, putative | chromosome | CDS | 2422764 | 405 | + | 0.582716 |
| NA | SPO0870 | transcriptional regulator, LysR family | chromosome | CDS | 927189 | 924 | + | 0.661255 |
| NA | SPO0206 | transcriptional regulator, LysR family | chromosome | CDS | 224915 | 894 | + | 0.670022 |
| NA | SPO2825 | transcriptional regulator, TetR family | chromosome | CDS | 3018691 | 579 | - | 0.65285 |
| NA | SPO2003 | acetyltransferase, GNAT family | chromosome | CDS | 2131958 | 480 | - | 0.683333 |
| NA | SPO1326 | transcriptional regulator, MarR family | chromosome | CDS | 1388612 | 432 | + | 0.689815 |
| NA | SPO0821 | transcriptional regulator, MarR family | chromosome | CDS | 853729 | 438 | - | 0.682648 |
| NA | SPO1023 | response regulator | chromosome | CDS | 1073886 | 381 | + | 0.627297 |
| NA | SPO1110 | transcriptional regulator, LysR family | chromosome | CDS | 1165314 | 903 | + | 0.606866 |
| NA | SPOA0357 | DNA-binding response regulator | megaplasmid | CDS | 399373 | 729 | + | 0.640604 |
| NA | SPO1059 | serine/threonine protein kinase | chromosome | CDS | 1110768 | 2112 | + | 0.620739 |
| NA | SPOA0405 | transcriptional regulator, MarR family | megaplasmid | CDS | 451196 | 468 | - | 0.67735 |
| NA | SPO0639 | transcriptional regulator, LysR family | chromosome | CDS | 661739 | 858 | + | 0.677156 |
| NA | SPO0051 | TENA/THI-4 family protein | chromosome | CDS | 51382 | 645 | + | 0.652713 |
| NA | SPO1624 | DNA-binding response regulator | chromosome | CDS | 1721282 | 681 | - | 0.647577 |
| NA | SPOA0451 | transcriptional regulator, MarR family | megaplasmid | CDS | 110630 | 477 | - | 0.528302 |
| NA | SPO3426 | DNA-binding response regulator | chromosome | CDS | 3629493 | 687 | - | 0.611354 |
| NA | SPO1042 | hypothetical protein | chromosome | CDS | 1089858 | 669 | + | 0.560538 |
| NA | SPO3403 | DNA-binding protein, putative | chromosome | CDS | 3607148 | 570 | - | 0.678947 |
| NA | SPOA0336 | transcriptional regulator, LacI family | megaplasmid | CDS | 377348 | 1035 | + | 0.576812 |
| NA | SPO1541 | transcriptional regulator, LysR family | chromosome | CDS | 1624752 | 912 | - | 0.672149 |
| NA | SPO3313 | DNA-binding protein, putative | chromosome | CDS | 3510359 | 570 | - | 0.65614 |
| NA | SPOA0224 | nitrite reductase heme biosynthesis D/L protein, putative | megaplasmid | CDS | 246196 | 993 | + | 0.708963 |
| NA | SPO1261 | transcriptional regulator, MarR family | chromosome | CDS | 1331077 | 543 | + | 0.661142 |
| NA | SPO3758 | acetyltransferase, GNAT family | chromosome | CDS | 3968242 | 729 | - | 0.679012 |
| NA | SPO0269 | negative transcriptional regulator | chromosome | CDS | 286691 | 615 | + | 0.650406 |
| NA | SPO0989 | transcriptional regulator SoxR | chromosome | CDS | 1043193 | 387 | - | 0.604651 |
| NA | SPO0211 | transcriptional regulator, LysR family | chromosome | CDS | 231701 | 897 | - | 0.677815 |
| NA | SPO2140 | cold shock DNA-binding domain protein | chromosome | CDS | 2275594 | 528 | - | 0.640152 |
| NA | SPO2756 | RNA polymerase sigma-70 factor, ECF family | chromosome | CDS | 2947414 | 603 | - | 0.704809 |
| NA | SPO3530 | transcriptional regulator, LysR family | chromosome | CDS | 3738405 | 873 | + | 0.704467 |
| NA | SPO2948 | transcriptional regulator, AraC family | chromosome | CDS | 3146698 | 1047 | + | 0.669532 |
| NA | SPOA0199 | transcriptional regulator, GntR family | megaplasmid | CDS | 210138 | 1479 | - | 0.623394 |
| NA | SPO2879 | transcriptional regulator, LysR family | chromosome | CDS | 3075132 | 918 | - | 0.675381 |
| NA | SPO1591 | SIS domain protein | chromosome | CDS | 1684791 | 888 | - | 0.648649 |
| NA | SPOA0281 | transcriptional regulator, LysR family | megaplasmid | CDS | 308914 | 885 | + | 0.656497 |
| NA | SPO1275 | cold shock family protein | chromosome | CDS | 1342151 | 207 | - | 0.541063 |
| acoR | SPO3788 | acetoin catabolism regulatory protein | chromosome | CDS | 4001094 | 1734 | - | 0.593426 |
| betI | SPO1082 | HTH-type transcriptional regulator BetI | chromosome | CDS | 1137532 | 579 | + | 0.637306 |
| chvI | SPO0710 | DNA-binding response regulator ChvI | chromosome | CDS | 741039 | 705 | + | 0.58156 |
| cspA | SPO3625 | cold shock protein CspA | chromosome | CDS | 3827599 | 207 | - | 0.541063 |
| ctrA | SPO1679 | DNA-binding response regulator CtrA | chromosome | CDS | 1785341 | 717 | + | 0.58159 |
| cueR | SPO0793 | Cu(I)-responsive transcriptional regulator | chromosome | CDS | 826233 | 390 | - | 0.648718 |
| glpR | SPO0731 | glycerol-3-phosphate regulon repressor | chromosome | CDS | 759232 | 774 | + | 0.640827 |
| greA | SPO0312 | transcription elongation factor GreA | chromosome | CDS | 324840 | 471 | - | 0.592357 |
| hrcA | SPO0009 | heat-inducible transcription repressor HrcA | chromosome | CDS | 7130 | 1065 | + | 0.630047 |
| hutC | SPO2190 | histidine utilization repressor | chromosome | CDS | 2327119 | 702 | - | 0.65812 |
| lexA | SPO2154 | LexA repressor | chromosome | CDS | 2289362 | 696 | + | 0.639368 |
| luxR-1 | SPO0371 | autoinducer-binding transcriptional regulator LuxR | chromosome | CDS | 385883 | 720 | + | 0.572222 |
| luxR-2 | SPO2286 | autoinducer-binding transcriptional regulator LuxR | chromosome | CDS | 2423208 | 702 | + | 0.609687 |
| metR | SPO3015 | transcriptional regulator MetR | chromosome | CDS | 3215540 | 906 | - | 0.63245 |
| mfd | SPO2074 | transcription-repair coupling factor | chromosome | CDS | 2206464 | 3429 | - | 0.657335 |
| nirG | SPOA0225 | nitrite reductase heme biosynthesis G protein | megaplasmid | CDS | 247185 | 450 | + | 0.642222 |
| nirH | SPOA0226 | nitrite reductase heme biosynthesis H protein | megaplasmid | CDS | 247631 | 483 | + | 0.668737 |
| nusA | SPO0063 | transcription termination factor NusA | chromosome | CDS | 66012 | 1626 | - | 0.633456 |
| nusB | SPO1763 | transcription antitermination factor NusB | chromosome | CDS | 1882930 | 483 | + | 0.652174 |
| nusG | SPO3516 | transcription termination/antitermination factor NusG | chromosome | CDS | 3726043 | 534 | - | 0.61985 |
| parB | SPO0004 | chromosome partitioning protein parB | chromosome | CDS | 3299 | 891 | + | 0.609428 |
| pcaQ | SPOA0047 | pca operon transcriptional activator PcaQ | megaplasmid | CDS | 41523 | 918 | + | 0.667756 |
| pdhR | SPO3231 | pyruvate dehydrogenase complex repressor | chromosome | CDS | 3437629 | 771 | + | 0.625162 |
| pecS | SPO3583 | transcriptional regulator PecS | chromosome | CDS | 3791148 | 510 | - | 0.654902 |
| petP | SPO0252 | transcriptional regulator PetP | chromosome | CDS | 272374 | 513 | - | 0.662768 |
| petR | SPO0251 | DNA-binding response regulator PetR | chromosome | CDS | 271676 | 702 | - | 0.646724 |
| phoB | SPO1953 | phosphate regulon transcriptional regulatory protein PhoB | chromosome | CDS | 2082449 | 690 | + | 0.647826 |
| putR | SPO3009 | proline dehydrogenase transcriptional activator | chromosome | CDS | 3207967 | 489 | - | 0.638037 |
| recG | SPO1681 | ATP-dependent DNA helicase RecG | chromosome | CDS | 1788412 | 2091 | + | 0.680057 |
| regA | SPO3865 | photosynthetic apparatus regulatory protein RegA | chromosome | CDS | 4078254 | 555 | - | 0.652252 |
| rhlE | SPO1443 | ATP-dependent RNA helicase RhlE | chromosome | CDS | 1513975 | 1416 | - | 0.659605 |
| rho | SPO3894 | transcription termination factor Rho | chromosome | CDS | 4106841 | 1272 | + | 0.590409 |
| rnc | SPO3198 | ribonuclease III | chromosome | CDS | 3410341 | 678 | - | 0.690265 |
| rnr | SPO3330 | ribonuclease R | chromosome | CDS | 3530661 | 2259 | - | 0.653829 |
| rpoA | SPO0511 | DNA-directed RNA polymerase, alpha subunit | chromosome | CDS | 507760 | 1017 | + | 0.610619 |
| rpoB | SPO3508 | DNA-directed RNA polymerase, beta subunit | chromosome | CDS | 3715822 | 4137 | - | 0.622915 |
| rpoC | SPO3507 | DNA-directed RNA polymerase, beta' subunit | chromosome | CDS | 3711273 | 4242 | - | 0.622348 |
| rpoD | SPO1750 | RNA polymerase sigma-70 factor RpoD | chromosome | CDS | 1870217 | 1983 | + | 0.614221 |
| rpoH-1 | SPO0406 | RNA polymerase sigma-32 factor | chromosome | CDS | 418384 | 879 | + | 0.653015 |
| rpoH-2 | SPO1409 | RNA polymerase sigma-32 factor | chromosome | CDS | 1479660 | 897 | + | 0.637681 |
| rpoN | SPO3795 | RNA polymerase sigma-54 factor | chromosome | CDS | 4008387 | 1284 | + | 0.595016 |
| rpoZ | SPO3204 | DNA-directed RNA polymerase, omega subunit | chromosome | CDS | 3416030 | 354 | - | 0.644068 |
| rtcR | SPO0156 | transcriptional regulator RtcR | chromosome | CDS | 172724 | 1572 | - | 0.633588 |
| scpB | SPO2500 | segregation and condensation protein B | chromosome | CDS | 2646909 | 657 | - | 0.674277 |
| soxR | SPO0314 | redox-sensitive transcriptional activator SoxR | chromosome | CDS | 325911 | 456 | + | 0.677632 |
| tauR | SPO3562 | transcriptional regulator | chromosome | CDS | 3775524 | 1467 | - | 0.649625 |
| ureG | SPO1717 | urease accessory protein UreG | chromosome | CDS | 1833882 | 648 | + | 0.603395 |
|
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