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2024-05-03 06:04:35

Gene list

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COG category: Transcription
Organism: Streptococcus thermophilus LMG 18311, LMG 18311

Number of genes found: 114

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Streptococcus thermophilus LMG 18311, LMG 18311
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA stu1737 sucrose regulon regulatory protein, truncatedchromosome CDS1550305 642 + 0.384735
NA stu0452 transcriptional regulator, LysR familychromosome CDS430246 903 - 0.405316
NA stu1288 transcriptional regulator, putative, truncatedchromosome CDS1139318 801 + 0.35206
NA stu0096 transcriptional regulator, putative, truncatedchromosome CDS104051 264 + 0.378788
NA stu0432 transcriptional regulator, MarR familychromosome CDS413023 444 + 0.382883
NA stu0222 unknown proteinchromosome CDS225997 138 + 0.391304
NA stu1214 transcriptional repressor protein, putativechromosome CDS1068873 447 - 0.41387
NA stu0549 transcriptional repressor, putativechromosome CDS519683 219 + 0.447489
NA stu0052 conserved hypothetical proteinchromosome CDS58699 375 - 0.418667
NA stu1990 conserved hypothetical protein, truncatedchromosome CDS1757409 162 + 0.358025
NA stu0586 conserved hypothetical proteinchromosome CDS555313 360 + 0.411111
NA stu1511 positive transcriptional regulator MutR familychromosome CDS1331070 864 - 0.321759
NA stu1558 hypothetical proteinchromosome CDS1375257 1299 - 0.401078
NA stu1293 transcriptional regulatorchromosome CDS1143941 519 - 0.387283
NA stu1530 transcriptional regulator, truncatedchromosome CDS1349633 663 - 0.372549
NA stu1950 positive transcriptional regulator MutR family, truncatedchromosome CDS1726501 699 + 0.307582
NA stu0219 transcriptional regulator, DeoR familychromosome CDS222247 765 - 0.383007
NA stu0814 ATP-dependent DNA helicase, truncatedchromosome CDS755605 783 + 0.371648
NA stu0261 conserved hypothetical proteinchromosome CDS261855 582 + 0.429553
NA stu1989 conserved hypothetical protein, truncatedchromosome CDS1757243 153 + 0.300654
NA stu0680 conserved hypothetical proteinchromosome CDS646828 2073 - 0.334298
NA stu0182 positive transcriptional regulator MutR familychromosome CDS189057 717 + 0.305439
NA stu0520 transcriptional regulator, LysR familychromosome CDS491433 915 + 0.408743
NA stu1044 positive transcriptional regulator MutR familychromosome CDS933089 855 + 0.304094
NA stu1736 sucrose regulon regulatory protein, truncatedchromosome CDS1549981 231 + 0.445887
NA stu1366 conserved hypothetical protein, Rrf2 family proteinchromosome CDS1198776 450 - 0.408889
NA stu0338 acetyltransferase, GNAT familychromosome CDS329026 522 + 0.413793
NA stu0342 conserved hypothetical proteinchromosome CDS332667 300 + 0.366667
NA stu1531 transcriptional regulator, truncatedchromosome CDS1350276 264 - 0.409091
NA stu0319 conserved hypothetical proteinchromosome CDS310414 495 + 0.406061
NA stu1435 transcriptional regulator, GntR family, putativechromosome CDS1269817 378 + 0.407407
NA stu0649 negative transcriptional regualtor-PBP synthesis, truncatedchromosome CDS615024 1431 + 0.404612
NA stu0339 transcriptional regulatorchromosome CDS329556 1227 + 0.403423
NA stu1947 positive transcriptional regulator MutR familychromosome CDS1720872 894 + 0.262864
NA stu1995 transcriptional regulator, TetR/AcrR familychromosome CDS1761522 540 + 0.338889
NA stu1381 response regulator (homolog to RR08 Spn) uncoupled, truncatedchromosome CDS1213524 363 - 0.366391
NA stu0917 positive transcriptional regulator MutR familychromosome CDS834855 867 + 0.294118
NA stu0981 transcriptional regulator, AraC family, truncatedchromosome CDS881848 609 - 0.351396
NA stu1380 response regulator (homolog to RR08 Spn) uncoupled, truncatedchromosome CDS1213203 276 - 0.402174
NA stu0183 conserved hypothetical protein, putative protein kinasechromosome CDS190043 2340 + 0.287179
NA stu0101 hypothetical proteinchromosome CDS110429 513 + 0.331384
NA stu0916 transcriptional regulatorchromosome CDS834195 336 + 0.357143
NA stu0615 transcriptional antiterminator (BglG family), truncatedchromosome CDS584425 372 + 0.387097
NA stu1287 transcriptional regulator, putative, truncatedchromosome CDS1138853 339 + 0.368732
NA stu0616 transcriptional antiterminator (BglG family), truncatedchromosome CDS584904 318 + 0.358491
NA stu1659 hypothetical proteinchromosome CDS1473002 486 + 0.425926
NA stu1600 transcriptional regulator, MerR familychromosome CDS1416898 741 - 0.384615
NA stu0792 response regulator (homolog to ciaR Spn), truncatedchromosome CDS740054 399 + 0.345865
NA stu1572 positive transcriptional regulator MutR familychromosome CDS1389392 864 + 0.313657
NA stu1892 trehalose operon transcriptional repressor GntR family, truncatedchromosome CDS1689521 159 + 0.333333
NA stu1528 acetyltransferase, GNAT familychromosome CDS1347816 558 - 0.401434
NA stu0381 transcriptional regulator, MarR familychromosome CDS372814 435 + 0.358621
NA stu1893 trehalose operon transcriptional regulator GntR family, truncatedchromosome CDS1689734 498 + 0.391566
NA stu1129 conserved hypothetical proteinchromosome CDS994829 474 - 0.35654
NA stu0813 ATP-dependent DNA helicase, truncatedchromosome CDS753868 1674 + 0.373955
NA stu0895 transcriptional regulatorchromosome CDS816896 921 + 0.384365
NA stu0887 transcription regulator GntR familychromosome CDS810505 699 + 0.409156
NA stu0253 transcriptional regulator, TetR/AcrR familychromosome CDS256579 540 - 0.357407
NA stu0665 conserved hypothetical proteinchromosome CDS636862 264 + 0.397727
NA stu0892 transcriptional regulatorchromosome CDS814460 690 + 0.394203
NA stu1948 conserved hypothetical proteinchromosome CDS1721850 2160 + 0.25
NA stu0240 acetyltransferase, GNAT familychromosome CDS246489 468 + 0.405983
NA stu1856 transcriptional regulatorchromosome CDS1653179 210 - 0.371429
NA stu0931 transcriptional regulator, TetR familychromosome CDS846346 540 - 0.42037
NA stu0065 transcriptional regulator, MarR family, truncatedchromosome CDS79043 330 + 0.40303
adcR stu0185 zinc transport transcriptional repressorchromosome CDS193745 456 + 0.423246
argR stu0048 arginine repressorchromosome CDS54828 459 + 0.411765
blpT stu1676 immunity/modification proteinchromosome CDS1485530 933 - 0.423365
ccpA stu0630 catabolite control proteinchromosome CDS596785 1035 + 0.380676
cmhR stu0872 probable metCcysK operon transcriptional activatorchromosome CDS794419 909 - 0.376238
codY stu1635 transcriptional pleiotropic repressorchromosome CDS1447606 786 - 0.381679
copY stu1586 negative transcriptional regulator-copper transport operonchromosome CDS1404425 432 - 0.458333
cspA stu0837 cold shock protein Achromosome CDS770104 210 + 0.314286
cspB stu0838 cold shock protein Bchromosome CDS770527 267 + 0.318352
ctsR stu0076 transcriptional regulator of class III stress genes (heat shock response)chromosome CDS85690 456 + 0.399123
deaD stu1261 ATP-dependent RNA helicasechromosome CDS1110742 1083 + 0.382271
epsA stu1112 transcriptional activator-exopolysaccharide biosynthesischromosome CDS980813 1455 - 0.369072
fbp stu0950 fibronectin-binding protein-like protein Achromosome CDS857068 1659 - 0.420133
fruR stu0399 transcriptional repressorchromosome CDS387770 747 + 0.39759
galR stu1403 galactose operon repressorchromosome CDS1239526 996 + 0.355422
glcK stu0728 glucose kinasechromosome CDS686286 969 + 0.410733
gnlR stu1777 transcriptional regulator, repressor of the glutamine synthetase, MerR familychromosome CDS1586708 375 - 0.381333
greA stu0242 transcription elongation factorchromosome CDS249116 483 + 0.403727
hrcA stu0118 heat shock protein, transcription repressorchromosome CDS121435 1083 + 0.393352
malR stu1014 maltose operon transcriptional repressor, putativechromosome CDS913963 1005 - 0.355224
nusA stu0341 transcription termination-antitermination factorchromosome CDS331462 1188 + 0.411616
nusB stu1738 transcriptional termination factorchromosome CDS1551036 435 - 0.388506
nusG stu0215 transcription antitermination factorchromosome CDS220161 540 + 0.390741
recG stu1725 ATP-dependent DNA helicasechromosome CDS1535455 2019 - 0.438831
relA stu0145 (p)ppGpp synthetasechromosome CDS159198 2220 + 0.418468
rheA stu1568 ATP-dependent RNA helicasechromosome CDS1384986 1587 - 0.444234
rheB stu1699 ATP-dependent RNA helicasechromosome CDS1506322 1344 - 0.416667
rncS stu1296 ribonuclease IIIchromosome CDS1149675 714 - 0.420168
rnr stu0625 exoribonuclease Rchromosome CDS590449 2454 + 0.417685
rpoA stu1908 DNA-directed RNA polymerase alpha subunitchromosome CDS1697239 939 - 0.385516
rpoB stu1868 DNA-directed RNA polymerase beta subunitchromosome CDS1663831 3582 - 0.424623
rpoC stu1867 DNA-directed RNA polymerase B prime subunitchromosome CDS1660092 3639 - 0.435834
rpoD stu1488 DNA directed RNA polymerase sigma 42 proteinchromosome CDS1311082 1110 - 0.414414
rpoE stu0133 DNA-directed RNA polymerase delta subunitchromosome CDS150659 582 + 0.359107
rpoZ stu1430 DNA-directed RNA polymerase, omega subunit, putativechromosome CDS1265428 315 - 0.361905
rr01 stu0317 response regulator (homolog to csrR/covR Spy)chromosome CDS308104 690 + 0.410145
rr02 stu0543 response regulatorchromosome CDS514541 726 - 0.315427
rr04 stu0901 response regulator (homolog to spaR Bsu & DvnR Cdi)chromosome CDS823699 660 + 0.4
rr05 stu1160 response regulator (homolog to RR02/MicA Spn & RR02 Sth &VicR Spy)chromosome CDS1019684 708 - 0.412429
rr06 stu1325 response regulator (homolog to RR11 Spn)chromosome CDS1174475 603 - 0.464345
rr07 stu1336 response regulator (homolog to RR01Spn & Sth)chromosome CDS1184196 681 - 0.399413
rr08 stu1420 response regulator (homolog to RR03 Spn)chromosome CDS1254576 645 - 0.412403
rr09 stu1686 response regulator (homolog to BlpR Spn)chromosome CDS1490729 732 + 0.375683
scrK stu1733 fructokinasechromosome CDS1545362 894 - 0.427293
snf stu0237 ATP-dependent RNA helicasechromosome CDS241081 3096 + 0.396641
spoJ stu2025 chromosome segregation proteinchromosome CDS1796025 768 + 0.352865
tex stu0663 transcriptional regulator, putativechromosome CDS634236 2133 + 0.442569
trcF stu0006 transcription repair coupling factorchromosome CDS5046 3507 + 0.381238
ureG stu0286 urease accessory proteinchromosome CDS279697 615 + 0.390244