Gene list
Applied filters:
COG category: Transcription
Organism: Vibrio fischeri ES114, ES114
Gene type: CDS
Number of genes found: 306
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Vibrio fischeri ES114, ES114 >VFA0626 acetyltransferase MEIINLQSTDDIYQQALNLRYDLFFREPGLPKEILVDDLEENSTHVAIVE KSELYAYGRLSEIAKGIFKISQMVVQPKMQGKGLGTRILSELVNLALEKG AEEVFLHARLNAVVMYEKIGFETIGNSYIAKVTGVPHIKMVKCC >VF0998 transcriptional regulator MPELLMNITSEQQSDFNKFTQCWLSGILKHSGAQKVICFLSQPSGAQLFK MAEGYSDSKHQPQITSLPFENKNDKNNIINTDYREFNTLTLCMSEGRNFN LHFSQCTDDIKHILFEQSEYYTLTDGEVEFMPLRNSQQRISGVLMFYFSN FSTYQKSDRQTIYTLNSLAIDRIALAIKNSYALLDQKIAPHSSTTHIPSD FNIVGDSSAIKEVRLNISKALHINRNVLVTGETGSGKELIAKAIHQFGNR RNEPYVVQNCASIPEHLLESELFGYQKGAFTGADRDYIGLIRSADKGILF LDEIGDMPSSLQAKLLRVLEEKKVRPLGSTTLYDIDVKVVAATHQALIKK IEQGEFRQDLYFRLAQFTIALPPLRERYGDIALLSHFFTKHYALELHQPT PALTNEFISYLDNYSFPGNVRELKNIIERCCMEAPDCQQLDKSVIEKVLN SIMMMTPKENKEQALTGSLSSQIDQFEKNVLMQYLEKHQGHLQTIANHLE LSKGSLDYRLRKFNLSAKEWRY >VF1443 virulence gene repressor RsaL MSSIADDIIKSLEQAVEIKKGNLEGNVTRYEIADVKAIREQLHVTQKELA MAIDVSVDTVKSWEQGRRNPTGLASKVLNLLSKEPELYSKFSD >VF1354 ATP-dependent DNA helicase recG MKIVELQEKESLYYCTKDEDHFFDRKAFGLKGEKVQKIAVAFANADGGEI LVGIADDKDEVIPEKRWQGQESTEAYNSVIQALSELVPSVDFRFDFLTRV NESRNYVLRVKINKGLSVHETAKKKIFLRQGAQSLPVTAPIKILELTHAK GIISEEDSLVNSASIDELDSSIELTKFLSELPIRAPDPITFLLKEKLVDS ETWAPTVAAVLLFAENPSAELPKQCAIRIVRYDTDGEDIDRDALTEDNIA IEGSLYQQIQDAYSKIELFLSKNKVWKVEGLVETKYPKETIWEILVNTVI HRDYAISDNVLVSIFNNRIEFKSPGRFTGFVTAENILENRCSRNSKIVRI LSKYKDSPNKDLGEGMNTAFQRMRSMGLRDPEILEDGNYVKIILRHSSND DPETLIMKFIESNGEINNRQARDLTGIDRTEKVTYQFSKLRDKGLIQRKD SSTGLKSSWIAV >VF1050 Protein YciN MSDKKSISEADLLLIANQIIQDHENYLEGMRATSVEEKDEVLVFKGEYFL SDQGLPTEKTTAVFNMFKYLAHHLSKEFTVK >VF0806 N-acetylglucosamine repressor MTGGQIGNVDLVKQLNSAAVYRLIDQKGPISRIQIADVSQLAPASVTKIT RQLLERGLIKEVAQQASTGGRRAISLTTETSPFHSIAVRLGRDYIQLSLF DLSTKELASEYQEFHYSNQEHLLDGLKLLLEGFISKNQDTIKQLIAIGIT LPGLVNPETGVVEYMPNTDVNKLLLADFIKDNFNTECFVGNDVRGLALAE HYFGASQDCYDSILVSVHRGTGAGIIVNGKVFLGHNRNVGEIGHIQIDPI GDKCQCGNFGCLETVAADPAIIARVESLLKQGYPSSLSQLPKITMTDICH AANHGDELATQTILRVGNQLGKAIAMTINLFNPQKIVIAGAITHADKILF AAIRNCIKNQSLTTFHKDLPIVASELYDQPTIGAFSMVKRAMLNGVLLQK LLDE >VF0058 transcription termination factor Rho MNLTELKNRSVSDLVALGETLGLENLARLRKQDIIFSILKQHAKSGEDIF GDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGK IRPPKDGERYFALLKVNAVNHDRPDNARNKILFENLTPLHANDRLRMERG NGSTEDITARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAHNHP ECELMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKA KRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIA EKRVFPAIDFNRSGTRREELLTKADELQKMWILRKIVHPMGEIDAMEFLI DKLSMTKTNDEFFDAMRRQ >VFA0043 transcriptional regulator, TetR family MTEKKQGKRSTETAEQTKCQILMVAATMFGELGYERVSLRNISEKAGVSH SLIRHHFGSKDMIWKAICDACDKHMQTYLHAIIASLPTDKTPSYRIYLFI VKLSAFTLMNPQPIKMIADAIRQDDNALLEYFLKTKCEFESIFKDLFEEY NQVNPESKLDIWETKWQMLIFSHGASSLTPMMSETWPQFANNQEKLLLQH WNLFNQIMAAKFSITKEQMLCPTELNELLIDVQCPLEQDITSSELIE >VFA0943 catabolite repressor-activator MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQLKVMAVVDEHNYRPD HAASALRAGSSRSFGLIIPDLENTSYAKLAKLLEFNSRKAGYQILIGCSD DDPETEMNVAHALISRRIDALFVASCLPNGSDYYLGIQEKGTPIIAIDRS LDDEHFGCVISEDFDAAYELTKSVVNENVKSIGLIGALPELNISRERQLG FEAKAKEKGLASIMGYGEHFNSESGKAIFEQWIKNDTIPDAIITTSYILL EGILDVLIEKPELMTRIKLGTFGDNRLLDFLPIKVNSLPQQFELIADSAL ALGLNASAKRYQAGIELIPRKIVIR >VF1081 transcriptional regulator, TetR family MAKNSKFDRVQVVDKAVDLYWEKGFHGTSMRNLQEVIDMRPGSIYATFGS KEGLFKESLQRYTQSGILHLEQCCHEQKSPLLGLKSFIHNIVVEKRSSAP SGMCMLVKTVTELTNENEELLTEAKRSLKIMESEFEKVLRQAQEIGEIEK EKDTKQLAQFVQVQIAGLRTYARTVDSDLPLQNMLDNMFSHYPF >VFA0935 transcriptional regulators, LysR family MNWTLDQLNAFVTSVKCGSFSAAARQMGKAQSRISTAISNLETDLGFELF DRSARLPVLTQDGKDMFVEAQAILEQCERLQARADTVATGEEIALTVALD EAVPIDVFEDFFQKISAKFPLLKLTIINGSQADIARWVDEKKADLGFLFR VNVLSDSLEYLSLGFFNQALIVSPEHPLAQFEKPTLIQLNQYRQLVIRDR VGHSQEKPISANHWYIDSYYYITALVIRSVGWALVPEHILESGWYKNQTQ KLSTDHILDTLQIEWGVVKRRDSGMGNVMEWMIDEIEHTFKKQ >VF0119 hypothetical protein MIFSPNSVSVPLIAPSVNLPTEQVARENRVKKPVAPTTKMSETTSEKAIK GDDKQHKRDAWEPSDHPGYDVMEEKEEPKPHFATLYDIDDDLAKLARLLS LDTYAQGEGTGYTIRFNLPKNLLDKLEEMGRMVRRRSVISFHYDKAVVPN NPSDILAVL >VFA0897 transcriptional regulators, LysR family MDLNLVRTFMAVYQCQSYTKASELLMLTQPAVSAAIKRLESEIGKQLFIK KGRGIEATSKAHALATKFQFALDTINDAVNDKNTLSVYCAEIILHSLVGL EQINFAESPRSQSMLFEHLREQKVDLVLDVATMKDSAFVIEDAYVEPLVV VCAKNHPRIQGELTKVDYYRESHVIYSALWQGMNGFEQIAQEPVEERNIA LTVSSLSSVLMFVSQGDSLGLVSQSFAKRWEKQLNLAIYPCPVKLDNAKY KFIYHKRYINDPQHRKVRQQIIDKLSKKKPFMEWMGL >VF1344 acetyltransferase MIVIKTYQEENASALWDVFFNTVRKVNRKDYSNEQVTAWAPESFDTDVWK NKMQSLNPFIAEIDGVIVGYSDLQDDGLIDHFFCHYQHQGKGVGSALMTH ILELAKERKLPRVYSHVSITAKPFYERFGFTVVKPQCIDVRGEQLINYVM ERQIL >VFA0561 transcriptional regulator MKQTILLVEDDKNLADGLIVSLEEAGYRCLHSENAANVSGLWSEADIVIL DRQLPEGDSLTWLSQWKQIKDVPVILLTALVSVRDKVTGLDSGANDYLTK PFAEAELLARLRAHLRSPETDEVKSKLVVGNLAIDTSTRDVVNSGENVTL TRTEFDLLLFLASNLGKVFTRDELLDQVWGYNHFPTTRTVDTHILQLRQK IVGIEIETLRGVGYKMKA >VF0462 transcriptional activator protein NhaR MSHLNYNHLYYFWMVCKQGSVTKAAEALFLTPQTVTGQIKALEDRLDGKL TKRNGRNIEPTELGQLIYKYADRMFGLSYEMLDIVNYSQQANVLFDVGVA DALSKRLVSKVLSTTVPEDASIHLRCFESTHELLLEQLSQHKLDMILSDC PVDSSQNSGLFSKKLGECEMSFFCSKELKGVTFPEVLEKHKVLIPGSRTS MGRKVVQWCDQQGVTPNILGEFDDVALMKAFARENNAVFLAPSVYMNEAD SDLSLHKIADVRDLKEEYYVIFAERMIQHPAVKSICEADFSHLFDF >VFA0247 SUA5 protein MLKRIKIEHRDFILNIADNSISKKNNEIKLTETECKILTLLLLAPKQVFS KEEILNYAWDQELNNNTSVVPQAISILRKKLYRDGIDAIDTVKGKGYKAT SNTKPCFSTKKKKLGFTMGVIATSFLAYHTYTFEPDLQPKINQSLIKVSD NIYQTSNSKPVVINPETLDKNIRYFINIQDKVLSLSACKMTNQECSSIYN KIFFIDDSNENIDINKLISNIEFKFNKPIGEPIFYNSSKDGNYKVSSSIN LRALNNSAYSGHVFINYDVTKLNNNQYKAELSAYVKESGYIGSFGYSVNL NVETEKVKNQPITHYIGKISRDEKYSGIKSGRQQFGTIKDQNQLYAFPLL KNGKHSTYFNHIYPMGNGVNYIYMENTNIAYLTFCYK >VFA0751 transcriptional regulatory protein TyrR MRLEVQCKDRLGLTRELLDILASQHIDLRDIEIDKSGLIYLNFPEIDFDE FSQLMAKIRRLDGVMDVRKIQFLPSERRNTELLAVLSTLPDPVFSINLKG KIDTINDAVVSLFKLDKTSLIGQSATVLLSDFNVQLWLEESRIRQREPML IDGMNYIMEIMPVYITDDSNTSILTSAVVIIKPAIEAQNARPFIPESSNL GFEHFVGSSTKYKQLISQAKKLSDIDQSLLIQGETGTGKEMLARACHNAS IRSGKAFMVVNCAAMPDDVAETELFGYAPGAFPNMPEGKKGIIEQADGGT VFFDEISEMSPLLQIKLLRFIQDGNFRRVGEEKEIHVDVGIIGASKKELL ELVEQGLFREDLYYRLNVLFLEIPPLRDRISDVATLFDFFVAQLSKELGI VKPSIDEEVYDYLASYTWPGNVRQLRSTTLKALTQMDRNQLSTSHFMLPI VDKNAPRSLNINTDGSLDEIMKSYESSILSSLYNEFPSSRKLAKRLGVSH TAIANKLRDYGIGKK >VF0606 glucokinase MATYISFDIGGTDIKFGVLNEQGKVLEQGKVKTETCGEKIIATLVDIKEQ WSKKYTFDGAAFSLPGFVDVNTGYLKTGGAIDDFYGFQFKDELTKKLSLP VELENDVNCVALAEKWLGKAQHVENFICITIGTGIGGAIYINNQMVRGHG FMAGEFGYMFTRNVFDIEDKATASMSFTASVREGLRRRYSTLKNINSIDN ISGKDIFELASTGDEVAIKVIDDFYNNIAIGLYNLTFILNPEKIIIGGAI SSREDLISNIEKKFNQIIKSQSSINEFNVKELVSIEKSTFNNDSGLIGAV YHFLTMKNKFK >VF0990 serine/threonine protein kinase MTDINIDHFIADDSDELNTESTRKEANTLPLPKVINERYKIKRVLGVGGM GIVYQVDDLLLKSIGLNNYHMAIKVLNSEASHFADADLLLVNEYIQSSHL HHPNIVSVQHLAVCNESQRGFLIMPVIKGELLSLLLDSPFENIPIDARLK YAYSLINCIHHCHKRGVIHGDLKPGNILISDSNELFLFDFSISRNLDPEK NKFTINFNQVHAWSGDYAAPEVLQGNAPTIKSDLYSVAILLYKLLLRVHP YQQNEEGPKPRTKEEQKLHHILLQAMRPVPSERQLNFKALLNIFKEMKNH QIDNHTPIMKKVTSIFSKK >VFA0181 probable transcriptional regulator SyrB MSRILVVDDDIELCNLLQEVLQDEGYDVDCVHCGESALEFIQTHSIDLVL LDVMLPKLDGYQVARRICQRFATPILMLTALGDEASMLDGLQAGADHFIA KPFNVPELLARITAILRRVGLERQRQSYVGATEDLAEQFLRLPLTETESE LLQYLIKNTDVVVSKADLQTNILKKELCPFDRNLDMHISNIRRKLLQSGL SKQHIKTVRGRGYSFIKVVNG >VF1716 transcriptional regulator, AraC family MPFRTPNIANMTDKKFLPQLDENLPTDVFFHYFFLEAKTETLSHSHPWGQ LHLIKQGRLEMEVDKQKMFCPANYAIWTPAHLLHRAFNHNDVEYCAINIE FELSQKLPTSACMFPLTPLLRAIVDDLVERQTTEVLSTEDKYLSHVLIER LSKTNPIENYLPFTDDKLLAPILMQLQENPADDSSLEIWAKRVFSTERTL ARRFQKELKMSFNDWRQRAKLAKAMVLLKDAISINEIAYQLGYSQGSSFI KMFRKHTGVTPEQFRKEQQGK >VF1654 IAA acetyltransferase MKYRIVDISSEHDNDICYIIKNVGVEFGAVGEGFGPGDDEVLEMSAHYNP KEKSKYLILLLNDRVVGGCGLSPFNNSGTICELKKLFLLPEARGRGFGKT IAGKILKFAKEVGYAQCYLDTLSSMKSAIFLYEDLGFKRLSKPLDGTEHN GCDVWMLKNLTECEIK >VFA0114 methyltransferase MYRISQLAELVGLSRTTLLYYEKLGLIKGERLNNGYRQYSEKDAQRLVLL QNLQAGGLTLKECQACLDAKVNREVLVERLEQLDQEIEQKQNSRQLLAAL LGESSLTDWHESLDQLAPEAHIEWLMKQGFDEKQAMRLKWLSKDMNEHER YMQDFDLIFKELERWGPGSESDTLKALQKVPNKSMTLLEIGCGQGIATEL FARHTDAMITAVDNEEFALKHLMEKMQQNGLEDKITTVCADMAKMPFETK SFDLIWSEGSAYIMGVQNALKAWKPLLSEDGVLVVSDLVWSTDKPSEGAL SFWKKEYPDMVSVSERIKHAQQAGYEVIEHFSLSDAAWEAYYHPLIERLD TLKDKLIDSPVLIDFENEITAFKQRANEFDYEIFILRSR >VF0591 glycine cleavage system transcriptional activator MSRRLPPLNSLRVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGL KLFRRRNRSLLLTEEGQSYFLDIKEIFSSLSEATDKVLERSAKGALTISL PPSFAIQWLVPRLSDFNNQEPDIDVRIKAVDMDEGSLTEDVDVAIYYGRG NWPGLRVELLYQEQLLPLCSPQVLLNEKPLATIDDLRFHTLLHDTSRKDW KQFVKHYELAGMNVNQGPIFSHSTMVLQAAAHGQGIALGNNVLAQPELDA GRLVAPFEEVLVSKNAFYLVCNEKQADTGRIATFREWILSKARSEQEIVD DE >VF0699 putative regulatory protein MHCPFCSATDTKVIDSRLVSDGHQVRRRRQCLACSERFTTFESAELVMPK VIKSNGNREPFDEDKLSGGLYRSLEKRPVSADLVELALNTIKSQLRATGE REVPSDMIGNLVMDQLKELDKVAYIRFASVYRSFEDIKEFGEEIAKLEK >VFA0266 transcriptional regulator MKVLIVEDNHHVAETIADYLELVGIDIDCAYHGAAAIEILKEETFDVIVM DIMMPKLDGISTVEVLRNDYACSTPILFLTAKDTLEDKIHAFEVGGDDYL VKPFAMEELHVRLLALSKRGRRTDIGKLTFEDMEMDVKAGTLYRQQKLIK LAPIQLKIIALLMKKAPDIVSKNEVIEHVWGDESPSSDALRSHLYTIRNA IDKDFDIPRLETIHGKGYRLK >VF1125 hypothetical protein MMNIKPIRTEDDYKAAMARISELTSSDPDALLDNEFDELEVLTALAEAYE NEYYKNEAPDPVIGH >VFA0646 hypothetical protein MANIRKAQGTDLTSIQELARDTINTCYRSFLGDEGVDWFINSGESDKEIE KQLSNCVVLELNNQIQGYCAFENDFVHILMVSPQIQRSGLGSNLLKHVEN KMTLLGHQTYRLETFKGNEQAIKFYLKNAWVIDREEKDEEFGFVRVYLSK RA >VF1676 hypothetical protein MSVKEKKRGRPSGSNKQLSQKSIMIMAKELMKSEGKIPSIRKLATHLNVD AMAIYYYFSNKNALLEAITVSLIEEIHQPKEQTDWQDELHLLCVSYLRLL NTYTGLLETLLSMTSQGPADIFTERFSMIIEPLELDNTAKKNALDLLADY LHGFALALHCNPSHELDISEYIKGPLNFYCLALKYSH >VFA0154 ATP-dependent RNA helicase DbpA MSQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKT GSGKTAAFGLGLLANLNVKRFRVQSLVLCPTRELADQVAKEIRKLARAIH NIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRVEEHLRKGYLNLDNLNT FVLDEADRMLEMGFQDAIDAVLDHAPVKRQNLLFSATFPPQIKSIADRIM NDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLKHQPESTVIFC NTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVAT DVAARGLDIESLDAVVNFELSRDPEVHVHRIGRTGRAGNKGIALSLFNEK EMHNIAQIEEYMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLR PGDILGALTGKDGIEGKMVGKINVFDFHAYVAVHNTVAKAALKKLESGKM KGRSFRVSRMRG >VFA0925 LuxR, transcriptional regulator MNIKNINANEKIIDKIKTCNNNKDINQCLSEIAKIIHCEYYLFAIIYPHS IIKPDVSIIDNYPEKWRKYYDDAGLLEYDPVVDYSKSHHSPINWNVFEKK TIKKESPNVIKEAQESGLITGFSFPIHTASNGFGMLSFAHSDKDIYTDSL FLHASTNVPLMLPSLVDNYQKINTTRKKSDSILTKREKECLAWASEGKST WDISKILGCSERTVTFHLTNTQMKLNTTNRCQSISKAILTGAINCPYLKN >VF2275 transcriptional repressor CytR MATMKDVALSAGVSTATVSRALMTPEKVSLSTRKRVEDAVLETGYSPTTL TRTLRRNESKTIVTIVPDICDPYFSDIIRGIEDAAVENGYVILVGDSSQQ KKREHSFVNLVYTKQVDGMVLLGSDLPFNVSRQEQKNLPPLVMACEYAPE LELPTVHIDNLTAAYEAVNYLTKLGHKNIAELSGPESSALCQFRHQGYQQ ALRRAGITMNASYVQYGDFTFEAGAKAITQLLSLSTPPTAVFCHNDIMAI GAIQKAKQMGFRVPQDISIMGFDDIEFSQYCDPALTTISQPRYEIGRQSM LMLLDLLKGHDVRSGSRLLESSLIVRESTASPKNK >VF1572 transcriptional regulator, LacI family MATIKDVAKLAAVSTTTVSHVINKTRFVAEATQKRVWEAVEELNYAPSAV ARSLKCNTTRTIGMLVTQSFNPFFAEVMHGVENYCYKQGYTLFMCNTEGD LEKQKHYLRMLAEKRVDGLLVMCSDLNEQLLTLLEKNTELPMVIMDWGPD SPRTDKIIDNSEEGGYLATKHLIENGHTHIACITGQADKVTCKERVRGFE RAHIDANLTFNPEWILEGDFECASASRAVDKILAIEENKRPTALFCFNDI MALAAISKIQQSGLRVPEDISVIGYDNIELSAYFSPPLTTIHQPKRRVGK TAVEILLERIKDKDHERRVFEMQPEVVTRSSVSNRLK >VF1449 transcriptional regulator, LacI family MATIKDVAKHASVSTSTVSHVLNKTRFVSEDISERVMAAVAELNYAPSAL ARSLKVNHTKTFGMLVTTSTNPFFGEVVKGVERRCYEKGYNLILCNTEGD AERVHSSLDTLLQKRVDGLLLMCTEIENQVLELFSRYQPVPTVVMDWGLI DFPSDKIQDNSHHGGYLATKHLIEQGHTEIGCLTGPLNKLQAQQRLSGFV QAMEESGLEINKNWIASGNFECEGGEAAFNEIHAKGKLPTALFVCNDMMA MGMINCASKKGISVPNDISIVGYDDIKMAKYITPSLTTIHQPKHRLGQQA VDSLLEKIATKSETNRVFQLEPTLMVRDSVKTLSN >VF0649 transcriptional regulators, LysR family MIDWEGVTEFVAVAEAQSFTGAARALDTSVAQISRKVAALEDRLSIKLLI RTTRKVSVTEAGQTYYQHCRHLVEGLKQADRAITELNATPQGRLKITSSV TYGEQLIAPLLSDFMLMYPQLELELVLSNQTLDLVEQDFDLAIRLGRLTD STMMAKRLSSRQVRVCASPSYIEKHGEPHTLSELSQHNCLVGSLPIWRFI ENKKEKSVRVKGSVHCNSGAALTNAALKGLGIVQLPDFYVQESMDKGELV EILVPYREPKEGIWAVYPNNRHLSTKVRLLVEFLAQELAE >VFA0270 transcriptional regulator MMSKQKDFDMNLLRVFVSVCQTGSFTKASEELDLTQSSVSNAIRRLKKAL GNELFTRSGRGIEMTAFGKHFFESVEPSVMSLVNIIGRDDRFEPLTSSRN FIVYALESALPRLQIRLRELLKDSNITVTLKELPSNEEETFDALMREKVD LVLDVMKPHQSSLKSVIVSEDAACCIARIGHPRILGEMTHE >VF2490 hypothetical protein MARITAEEKEQKKNQYDALIFQIFTEEGWDAVTYDRLAKELDIGKSSLQR YYPSNLFFATALQGKVFPLAIQKLDLSSKSAFIQSWLTAYHDENDHIFHE VIRMLMANIMNHGGAPATKSAIGRLIALLAQTLGEDDAKDAVITALGYTI YSYIEQ >VF2438 transcriptional repressor of FabB MYPEFEVDDLNAVSEVKRPVSAKGVRAQQKERTRRTIIDAAFCLLCAERG FTSLSLREVTREAGIAPTSFYRHFKDMDELGLTLVDEGGLILRQLMRQAR QRIVVEGSVIRTSVETFMEFIEGSPNVFRLLLRERSGTSPAFRAAVAREI QHFVAELTEYLVATTGVAREEALVQAEASVTLVFSSGAEALDLDSASRTE LSERLIFQLRMLSKGAYWYRKENEK >VFA0593 transcriptional regulator, TetR family MPKRSKEDTEITIQKIMDAVIDQLLRLGYDKMSYTTLSQQTGVSRTGISH HFPKKTDFTAALDGRIFRLFAERLDMQGDKQQFIDSWISSLEDEQFRAIL RLLFHHIVTSANAHEFAHNGIERLYSMVEDLYGEESRKDLEWLIGLSLIR MAK >VF1713 ATP-dependent helicase, DinG family MIAKIFSSSGALGKAIPGFQPRQPQLDMAHAVHDAIKNGTQLVVEAGTGT GKTFAYLAPALVSGKKTIISTGSKNLQEQLFHRDLPLMVSSLGFYGQVAL LKGRSNYLCPERLNRQLIESHTPQADPELLTQLVKVRTWSSETKTGDLGD CEAIAEDSPIIPSITSTNDNCLGKECPSFEECFVVKARKKALDADVVVVN HHLFLADLAIKETGFGELIPEADIFIFDEAHQLPDIASQYFGQSLSSRQL TELAKDIEIGYRTEARDMRQLQKVAERLAGAAMDLRIILGDTSFRGNWRE AIKSQAVQREILRINDAFELAYDVLKLALGRSQLLDAAFERCTLLKNRLE RVCDTTISGYSYWYECTPRHFSLHITPLSVADKFKEQVAEKEGAWIFTSA TLAVNDDFSHFTQRLGLEPTKQFSLPSPFDYQSQALLCVPRFLPEPNSYG VAPKLVELLEPVIKQNQGRCFFLCTSHQMMRDLAELFRQTLDLPVLVQGE TTKQKLLTEFMELGNALLVATGAFWEGIDVRGDALSCVIIDKLPFTAPDD PLLKARIEDCQLSGGDAFSQVQIPDAVITLKQGVGRLIRDTKDKGVLVIC DNRLVTRPYGSTFLQSLPPIPRTRDLKKVSEFLAQTNQTEVEQVEQKAIL EN >VF2529 transcriptional activator protein ilvY MNIKLLQTFLHLCESHSFTHTSKAMHLSPSALSRQIQKLEDDIGHPLFIR DNRSVELTSAAKQLIPIALNICSEWSGYKASSNVVNNALKGQLKLFCSVT ASYSHLPQLLNDFKVNYPHIDIKLSTGDPAQAIEKIESSEVDIAISAVPE KPSNKLAFEIISEIPLSIIAPLGNNQFISEINKENSNWELLPFILPESGT ARNRANQWFKEQGIKPTIYAQVSGHEAIVSMVALGCGIGIAPDVVINNSP VKDKVQRLNTLPIAPFKLGLCCKKSKLNDSVIQALWQVAENTFI >VF2265 probable activator protein in leuABCD operon MNTPETSLSSVARTEQILRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQP AVSNAVSRLKLMFNDELFIRHGRGIQPTQRARQLFAPMRQALQLVKNELP SSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQNKAPHISLKLSGEHEP DIAQKLRYQEVDFVIDYVRFDEPGFMSTELFTDELVVVASVNHPRLQNGI NKEQLASEKHAVPARIANTKGFADHLYVDSLYEQAYKGASISNILYVVSQ SELITVAPKWLVNSMPNRDQLMVLPLPIESKGISGYLSWHDSYQKDKGHI WMRDQLMLICGEEVVASSKGMMF >VFA1053 transcriptional regulator, MerR family MLTVTQMAKHHNISRTTILYYERAGLLLPAYRSDNGYRWYGDKESKRLEV IMAYRSFGIPITDIMPLLDHQDDMTQESILRNQFNALENEIQRLRQQQNA IVMLLKQPTLLEQNMVTKARWVEIMKAAGLNEQDMQNWHKQFEKMEPDAH QEFLESLSIDAEEISEIRAWSKA >VF0574 transcriptional regulators, LysR family MSSRLRVTIKLFKSIVLLLTMNEINWKAVDLNLLVAFSTLMETKSVSLAA NKLFVGQSAMSHSLSRLRELLHDPLFERQGHQMIPTAKAIQLYPLVNKVL QTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFDAIHQLAPNAQ LCFTTVDKANYQDRFDSEPLDLVIGSMKPELKEFQYQTLYTEKHVCMWDG QRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASK HFLTIRHLMKKRDLICVVPELMAQLDLFSEKLVHSEPPINVGEFDIQLIW QTRNKENKRYQWLKELLIQTIEKSVAVYRA >VF1783 nitric oxide reductase regulator NorR MKNIKDEWVQIALDLTSGLSSKDRFERLLSTIRNALKCDASALLLFKNQY FSPLATNGLDGDVIGRRFAISQHPRLEAIARAGDIVRFPSDSDLPDPYDG LIANEERQLQVHSCIGLPLLVNERLIGAVTIDAFDPTQFDSFTNKELRII SALAATSLHTALLMERLENQSGENSNNSSFERSPDNHVEMIGESLAMQEL QANINAVANTELSVLITGETGVGKELVASALHQRSTRAQQNLVYLNCAAL PESVAESELFGHVKGAFTGAISNRKGKFESADNGTLFLDEIGELSLALQA KLLRVLQYGDIQRIGDDNHIKVNTRIIAATNKTLSDEVKNGDFRADLYHR LSVFPIFVPPLRDRGNDVTLLVGYFAEKSRIKLAATSIRITPEAITLLND YSWPGNIRELEHVISRAAVLSRAQSDDSDLVLSPTHFLIKKENHAEKNIA NQIVTPHSKNTKDLRSATDEFQANLIKKTYQEQQQNWAATARALQLDTGN LHRLAKRLNLKE >VF1834 RNA polymerase sigma factor flagellar operon FliA MSDGLTYDHKGNVNSQKAFLERYSDLVKRIAHHLMARLPASVLVDDLIQA GMIGLLEAQQNYDGSKGASFETYAGIRIRGSMLDEIRRGDWVPRSVHKNS RMINSAIRELEAKLSRDPTDKEIADYLELPLDQYYQILNDVNCGKLVGME DLGVSDDVIATEEQADDNLPFQGVADEHFRVALVEAIKTLPEREALVLSL YYDEELNLKEIGAVIGVSESRVSQIHSQSMQRLRAKLSSWTVE >VF0670 urease accessory protein UreG MQDYKQPLRIGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDA KILTQAEALAADRIIGVETGGCPHTAIREDASMNLAAVEELAQRHKNLDV VFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITKSDLLII NKIDLAPYVGASLEVMESDTARMRPTRPYVFTNLKEGVGLDKIIEFIVDR GMLDAK >VFA0419 transcriptional regulators, LysR family MVTNKLITLLPDLATFIVVVNEGSFTAAAKKLGVTPSALSKLITRLENAL SVKLFERTTRSLLITESGKKIYQQSVIMVEAAQQAVDISSSEHTVPSGSL TVAAPKAFLTIVLQPLITPFLTKYPKIQLKLRASDGDIDMIAQGIDVVFR LTDKPTEGLVMKEIGKVNLSLCASPTYLEERGIPHLPQELANHDCLFLGE TTTDHIWEFVKGTESHVIAVSGRYAVNHSQMRLNGVKDGFGIGIFPDFVI KEALANNEVISVLSDWQIKGNYHGVIAMQYAQNKYIPSRLKVFTEFVKEN LMKSKVNDERT >VF2496 serine/threonine protein kinase MLLGTSSTQIFYHLLDLDDEQQQKVLDTLKENQPEIHQEITALLGSSPSE HFSDLLGFHAQQTCHFDWDLSNQTIDKYQLRDELGRGGMGVVYSAHRANG TFEQELAIKFIQPSFNNLLDKRALFEEAQLLARLNHPYIAKVFDGGEHQN LVYVVMEKVIGSTLNDFLVMHELSKAQKLHLFSQVCKALEHAHQHNVLHA DLKPENILIDKQHSPKLIDFNLTQKVKESTIEPQQGVLAFSEQFASPEQK SGGFLTQQSDIFSLGKILHLLFPVTNENDDIHCIQTKAMQESLDKRYRSV LELRLDIEAVIASRPISLKQHRPCYTLTCLLKRKPIPSFLCALLMITGIA FSSLLALKNHQLEQEKIVAENMMYEVTQLLFHSKGSSVSQASINSMLELT RRRILSNPDLPAHIKQRMLLAMMTPIPTKQKLTTHHFTNNN >VFA1115 transcriptional regulators, LysR family MKTSQIEMLLYTVELGSIAEAARKLQKSRTTVSAALSTLEDELGVTLLVR TGNRITPTEIGESIVNDCQRMMVISNDIVSKCLQYNEGIASTIRVVRDDS LPEPIWRDILTRMSRKFPNTSISIYVAPSPELEEMVEQNVVDVAYGILPI NSQLLHVQQNELGQIRMMSVAHKEHPLSLLRKVSPTDLESHTEIIVNYID DDELMVFEPKSSKYIALTFYEHLRDAVLDKTGWSSVPALLINEHLRDGTL KVLKHNRAMNWQSFAEMTKTTMPRGVIIDWLSEQVEDYLLEVSE >VF1974 hydrogen peroxide-inducible genes activator MNKWPSLKQLHYFITLHETRHFGEAAEKCFVSQSTLSKGIQNLEELIGCT LYERDKKTLVFTPVGERVVEQGRELLAKGQDLIELGSLCQGDSMQGQLRV GCIPTIAPFLLCDLVQEVNEKYPQLTLLLREDTTTNLLAALRQGQLDVLI LALPVDIAGMESLVVGQDPFKMVISKDQASSISTPIRYDDLPDEFVFLLE KEHCLTEHAVSACKLTKREKINPFTATSLHTLVQMVANGLGTTFIPQMAI KHGLLDNQNLVVVEPPGQEASRDIGLVWRPSSSRLQAFHQLADIVEDIL >VF2254 RNA polymerase sigma factor RpoD MDQNPQSQLKLLVIKGKEQGYLTYAEVNDHLPEEIVDSEQVEDIIQMIND MGIKVVETAPDADDMSLNDDDAVTDEDAAEAAAAALSSVESEIGRTTDPV RMYMREMGTVELLTREGEIDIAKRIEEGINEVQCSVAEFPGAISYLLEQF DKVQTEEIRLTDIISGFVDPNDDGSSAPTATHIGSELSESELDDEDDEDA EGETEEEEDAGIDPELALEKFTELRTSYHNMQLAFEEFGRDDAKSREAIG ELTDIFREFKLIPKQFDYLVKEMRDGMDRVRTQERLIMRMCVEYGKMPKK SFIALFTGNESSDEWFNEIMASDKPYVERLQRYEEDIRRSIAKLDSIEKE TGLPVENIKDISRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQ FLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI RIPVHMIETINKLNRISRQMLQEMGREPLPEELAERMQMPEDKIRKVLKI AKEPISMETPIGDDEDSHLGDFIEDNTLELPVDSATSTSLKFATNDVLAG LTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH PSRSEVLRSFLDE >VFA0744 transcriptional regulators, LysR family MYKNRKSLPSFDDIYLFVLVVRHKGISAAAQFSGLQRSKVSRRLQELEKA LGHQLLIRTTRSIELTKQGEWLYHQASNPINTLVDASLLMRDHHVTPRGT LRVAIPPALGMTEVFSTLIEKYIEENTEVKLEIEHHVQSLDLRRSNIDLQ ILPSYIEPLHNDYIQQRLIQIPYSMVASPNYLRINGHPDNVTQLDQFHLL ASRYNKSLLPQGLNYQLFSDDLNLLQKLAISGKGIALLPSILIEEDIKQG LLVEVLPRKSFTDLTITLIYPTPHYLPEKTRAMVNLFRATFSDLP >VF1086 hypothetical protein MHKIIIANLVLEPESRTLTNQFGHKVMLRPLPYEVFRLLLDQQGKSVSRD QLFNVCWEGMVVTDQALTNVISNLRRNLVQLKAENVTIKTVSKIGYLLAI EQPITIVENTNEIAPLKKQSEPSSVANKIKKKEAFNRKTADAILKQLLTK PSVKSVSCCFFLVAMIIVGVVYQRYISIPHFLVSNNYEHFSVNNTDFYLL NKTKEKTDIEKIKSGIESLNLAECNANVYIRMYDSVYEDDTYSLKGYIEA KNNNRNGNYSLSQFSYDDLPNIIGEALKRAKLVCD >VF2411 DNA-directed RNA polymerase beta' chain MLWQIVPEGLPYSIINQKLGKKQISNLLNEAYRTLGLKDTVVFADQIMYT GFAYAALSGASVGIDDMVIPDAKYTKVADAEEEVKQIQEQYQSGLVTAGE RYNKVIDIWAATNEQVAKEMMDNLSSETVLNRDGEEEQQESFNSVYMMAD SGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVNQYFISTH GARKGLADTALKTANSGYLTRRLVDVAQDVVVHLDDCGTYEGVTMTPLIE GGDVKEPLHERVLGRVVAEDVLKPGTDEILLPRNTLLDEKQCQIVEENSV DQIKVRSVVSCEADFGCCANCYGRDLARGHMVNQGESVGVIAAQSIGEPG TQLTMRTFHIGGAASTAAADNSIQVKTTGSIKLHNAKHVTNGEGNLVITS RASELTVIDEHGRTKESYKLSYGTILTKKDGDAVNQGDKIASWDPHTMPI ITEVQGQVQFVDMIDGVTITTQTDELTGLSSIVVLDAAERASAGKDMRPT VKLVDANGNDIMIPGTEMPAQYFLPGKAIVNLADGGNVGIGETLARIPQA SSGTKDITGGLPRVADLFEARKPKEPAILAEHAGIVAFGKETKGKVRLLI TRDDNGEVYEEMIHKHRQLNIFEGDKVERGDVISDGPETPHDILRLRGIH AVTEYITNEVQEVYRLQGVKINDKHIETIVRQMLRKCTITHSGDSTFLEG EQLEFANVTIANRQLEAEGKQPARFERDLLGITKASLATESFISAASFQE TTRVLTEAAVSGKRDELRGLKENVIVGRLIPAGTGFAYHQERQKQKAVEQ EGPSAEQATDNLAALLNAGFSSEE >VF2343 transcriptional regulatory protein CpxR MAKILLVDDDIELTALLKDILSLEGYNVIEANNGIEGLAAITDDLDLILL DIMMPKMNGMDMLRKLRETNETPVLMLTAKGEEIDRVIGLELGADDYLPK PFSDRELLARIRAILRRTQGKTKESNSSSIKYQDIELFVGKQEAYRNGEL MELTGTEFGLLSQFIQKPGEIISKEDLSLEVLGKRLAPFDRAIDMHVSNL RKKLPPLSEGKPRIKTLRGRGYLFVEE >VFA0334 transcriptional regulator, MarR family MKYKYIVHNLFLFKEASMEKQNKTQDKNNIDSPQLLLKNQVCFSLYSASN AMIRAYRPLLNTLDLTYPQYLAMMVIWEKNGINVKDLGHDLHLDSGTLTP LLKRLESKGIVTRERSKEDERIRLVFLTKQGIELKNKALSVPNGIFCKSQ LQLEELQQLKATCEKLLANLEK >VFA1160 transcriptional regulator MFSYHELITIESVARLGSFSQAADELHKVPSAISYTIKSVEDRLTVVLFT RLHRRVELTAAGTYFVDQARKLLKDMEEIRFNTQRVANGWQQSVSVALDN VVRENSVNQLVRDFYATFPDIELQLTMEVFNGVWDALMTGRADIGIGATA TIPIGGDFSYRPMGELAWDFIVSINHPLASFEHDIPNEELVKYPAICLED TSQILPKRSTWLLDNQRRLIVPNWHSAEQCFIDGLGVGVIPNHRAKRLLE TGQVISKKIEHHIAPSPCCLAWNNNNQSVAIQWLLDYLGDSDKLNSEWLK EF >VF1333 transcriptional regulators, LysR family MTPYPTLPYSHNGFKAFESVARLMSFTSAANELNVTQSAVSRQVKQLEDD LNASLIIRKHRSIQLTTQGLELYKTLQDNFTSLESVISSWQDPKPKRIVI KAALSFATRALLPKIKEMNERYSDYEIVIIPSLEEDEALNTTDYDLLIFH TRLRNHYDNKSNFSLLREEFMAPVCATSITTKDTVLDDVLQLPRLHPTVD HLDWITWLNNEKYVPHQKVRNTSFHSLDLALSACLSGQGATVTDLLLILP ELERNFYYCPRHTTLQHSAWVYYIHQHTHSSAINELIEWLQQEAKREIES LKCLAKTHHWGGIINQIN >VF0102 acetyltransferase MFRLITPTTEAELKAYYHFRWKILREPWRQPEGSERDAYDDMSQHRMILD GRDQPVAVGRLYLTPDNDGQIRYMAVAPHCRGKGIGALIMVALESYARQE NAKRLVCNAREDAIPFYVGNGFTSQGELSDERGPVRHQQMLKHLDPLADV LRRPDWCAELQKRWENEIPISDKMGIKITQYTGYRFEVSAILNANLNPHN SMFAGSIFTMGTLTAWGIVWLLLKERGLDTTSIMLVDSHIRYRQPIVDNP KGITSLNCLEGDFDRLQSGKRARVKVKVDLCNGDNPAAEFTGTFMLMRD >VFA0459 transcription-repair coupling factor MCQAKAMDRLVCGDVGFGKTEVAMRAAFLATHNEKQVAVLVPTTLLAQQH FENFRDRFANFPIRVEVLSRFKSAKEQKEILAATAEGKVDILIGTHKLLQ DSIKFDDLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNM AMSGMRDLSIIATPPARRLAIKTFVREKADDVIKEAILREIKRGGQVYVL HNNVDTIQNAAEEIEKLIPEARVTLAHGQMRERELEKIMGDFYHQRFNVL VCTTIIETGIDVPTANTIIMDRADKLGLAQLHQLRGRVGRSHHQAYAYLL TPHPKALSKDARKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDGQSG QIQSVGFTLYMEMLEQAVEALKEGKEPSLDDLLREQTEVELRLPSLIPED YIPDVNTRLSLYKRIASVSSNGELDELKVEIIDRFGTLPEATQTLLISSE VKMLAASLKVKKLEAHGNGGYIEFEPTADINPMFLVSLLQKDPTGFALDG PTKVKFIKDLTERQTRIKYVMDLLKLFNENRI >VF0656 transcription elongation factor MINKEALLDSIIDELRKIHQLALDATQRAIDQATDKEAIARSKYETFGLE ASYLAHGQAVRVSECEADILAYRKLPRLVYTENSSINQGALVTLVNQDDV ESTFFIGPSAGGVKVAHQDLVFSLITPSAPLGKAMIGQQVGDEFELNLAG KKQQYEIIDVQ >VF0891 transcriptional regulator, RpiR family MNTIEKIQNNLDNFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPT VNRFCRRLDTKGFPDFKLHLAQSLANGTPYVNRNVEENDGPDAYTHKIFE STMACLDVAKNSLDPMQVNRAVDLLTQAKKISFFGLGASASVAHDAMNKF FRFNIPIACFDDIVMQRMSCINSTENDVVVLISHTGRTKSLVEIAELAKS NGATVIAITAKDSPLEKMASLAICLDVPEDTDVYMPMASRVVQMTVIDVL ATGFTLRRGVGFRDNLKRVKEALKDSRYGKDERYQ >VFA0238 glycerol-3-phosphate regulon repressor MKQLSRHQEIVNLVQQHGYVSTEDLVEQFKVSPQTIRRDLNELADENKIR RHHGGATIPLSSVNTAYTTRKVMQLNEKDTIAEALAKHIPDGATLFIDIG TTPESVAKALVKNHKDLRVVTNNINVAMILMANPDFKVILAGGEVRNRDG GIVGEATLDFIKQFRLDFGILGISGIDYDGSLLDFDYHEVRVKKAIIENS RSVYLAVDHTKFGRNAMVNLGSITELHMIITDQEPPEEIVTILKDNEIPY EVISK >VF0454 transcriptional regulator MGTQFRMDSVPGSLVVVGGSYEPWLAVLEQVGWRCHRCYDLRAAQALFDE IGPCIGIVDLSQDDFSLNGIATLVNNNKQVRWMAFIRESQLSSDTICQFI VNFCIDFFTAPIPDAQLLSTIGHQLGMLKLERKVWPNMGNKSDLGILGEA PAVKRLRDQIRRVAPTDVSILISGESGVGKDAVAKAVHESSGRNKGPFVS LNCGSLSENKIEQELFGSHSSSPEESKLFQANGGTLFLNDINDLPASQQQ HLLRFLQEGNIETEKGFVDLDVRVIVASHIDLEKAIEEGSFKEELYYRLN VLRIHVPSLKERSSDISVLAEHFLQRYAKEYNTQARTFSEEALQTMLHYQ WPGNVRELVNQVKRAVLLADSMTIDLEHLDLPQRSETKRSLRVIRENSER DALLMVLESHDGQVSSAAKELGVSRATMYRLLNKHNLISEPRSYS >VF1881 negative regulator of flagellin synthesis FlgM MTSIDQLRASQAMASLRNQARVDSGDKAPETQAPALSAKSDAVSLSNQGK EIGQMHQQLATEPSFNEDKVAAIKAAIANGSYTVDPERLADNMIKFEDEL AGL >VF1627 response regulator, GacA MIKVFLVDDHELVRTGIRRILEDVRGIKVVGEADSGEDAVKWCRTEQADI VLMDMNMPGIGGLEATKKILRFNPDVKVIVLTIHTENPFPTKVMQAGAAG YLTKGAGPDEMVNAIRMVQSGQRYLSPEIAQQMALSQFTPDAENPFKELS ERELQIMMMITKGEKVTDISEQLNLSPKTVNSYRYRLFSKLNISGDVELT HLAIRHGILDAETL >VF0559 Trp operon repressor MSGSAKYSDWSQVMTLIANAAEQGNHQPLLTMLMTPDEREALVARVNIFH ELLQGELSQRQISQLLGVGVATITRGSNELKSHTDEEKVWLMDLLEKSTK SELDVEKE >VF1074 transcriptional regulator, AraC family MDVMLANSNPHFLRSSILPFELRYSSNSSACYKKHTHQEFSIGVVDSGIS EYFNQNKKQTISPGSTVIVNPEEVHSCNPQKGTNWSYKMLYVEPEWIAKL QSQILNDNNNTFRPFQITHTDCPFIYRGFQSLSHTLIEDESKIKVEQTAI NFFSELILKDTNNPSLDVISKKAIDCAYQYISDNFDKNISISEIAEVSGL SEFYLIHSFRKQYGITPHAYQIVMRINKAKALLKNGENIASIATDLGFTD QSHFHRNFKSVVAATPKQYKQSL >VF2314 ribonuclease R MSKIIQNDPFQDREAEKYENPIPSREFILEFFEKADAPLNRNDLFEALGL SGEDSYEGLRRRLRAMERDGQLVFTRRQCYALPERIEMLKGVVLGHRDGF GWIRPEGSLGKDNDVLLPFHQMKKVIHGDVVLVQPTGTDKRGRKEGRVVR VLEPRNEGIVGRFFIEDGMGFVVPDDSRISQDIFIPKEHKMGARMGNVVV MDITDRGSRARGMTGKITEVLGENMAPGMEIDIALRTHNIPHVWPAAVEK QVEGLGEEVPEEAKEGRVDLRELPLVTIDGEDARDFDDAVFCQAKASGGW RLWVAIADVSYYVRPDNALDKEAIQRGNSVYFPAQVVPMLPEVLSNGLCS LNPQVDRLCMVCEMTISASGKLSGYKHYEAVMNSHARLTYNKVSDILDGD EELTQRYEPLVPHLKELHNMYQVLKTAREARGAIEFETIETKFIFNADRK IDSIEPVIRNDAHKIIEECMILANIASATFVEKAKEPALYRVHESPGEER LQGFRDFLGELGLSLSGGLTPSPTDYGQLVHVIADRPDKELIQTMLLRSM KQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKEKGQN NDRWTPTGGYHYSFDDMDVFGEQCSMTERRADDATRDVSDWLKCEYMQDH IGEELEGVIANVTGFGFFVRLNDLHIDGLVHISSLANDYYQFDPAGQRLT GESSGQIFRLGDQVTVKVVAVNLDDRNIDFECTSSMRKARGHGKTAKENA KKRGAKEPRRDPNFKPKKKGDKSEPKGLGQLGERKSKGKKGKVKSKAQAM VEPTKRPDGSTEGVKAKKKPKHKKKVRARKPKANK >VFA0880 putative DNA-binding Protein--AraC type helix turn helix MLLLTATSNQELATWNKKITTFSLARSISTNNKIIDYKFNLESLPNGLKF SILLAENFKIKIESKNGYFMLISTINPINWNSENNLGYSDLFIINCKNEI NIYSTNNEQIKTILIPNTLLSKNASQLINNGVDLLHNKSSIKKILNTMVT FKDKCLLEWGVHGIIVLIEDWEPYYNGKYSYDKIISKIEDNYLNKNYSLT NLAEETYISKRTIQLILNKKKTTFKKTLNNRRSIHMHKLINKNPNITLED ASYHSGFSSYQTAKRNFSTFYGITPKLYKKIEC >VFA1171 DNA-binding protein ParB MAIKTSDLNAKLFGKTNKRRATTPVEAQKAAKSQAQVIELAVAGEDLVTF ELRKIPAKDVSSSTVVFAENAREQSFLTEHALSDILSTLRDRGQQYPAVG RVVEGGKIEVLDGSRRRMSCILAEQDFLIYVAEGINTKHAKFLSDVANAH KPLSLYERGKEMQAMLSRGDVADQKELAKVCQCSEALVSGALKAATLPLE LLQAYPSVSEIGRPTVVKLHKLYNALSEEEQKTLLKQCAGEQGAAWTRST ALGVSRMTKEVTELIEVWIEDLLPKKEPAKSLTTELVKGRASYKRKGSGL TLSLKKVDDALMEDILEYISQKVS >VFA0384 ATP-dependent RNA helicase MSESITEFRQLALDESILSALDDMGFVAPTPIQAASIPLLLEGRDALGKA QTGTGKTAAFSLPLLNKINLKQHNPQAIIMAPTRELAIQVAAEVKNLGRN IKGLKVLEIYGGASIVDQMRALSRGAHIIVGTPGRVKDLLNRDRLNLGEV HTFILDEADEMLKMGFVDDVTWILEKAPDTAQRILFSATMPPMVKTIVDR YLREPARVDVAGTNHTVDKVEQNFWVVKGVEKDEAMSRLLETEETDASIV FVRTRQDTERLADWLSARGFKAAALHGDIPQSQRERTVDNIKNGVIDILV ATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVR TNQMRMLRTIERVTKSTMEEIQLPHRDQVAECRLAALAAELQADKEFVAL DAFTDLINKLQETLEIDATTIAAMLLKRQQGKRPLFYKGPDPMIAAMERA KNRRSDRGERGERGGRGDRPERGERRQYNNDDFDTYQLEVGREQGVQVKD IVGALANELGFTKGSIGAIKLAPGHTYVQLPKKMSADVAGKLKKLRIRQN ETKAVVVEGVDLTIERRPRTGGGRDDNRGGNGRGGYRGNRENREGGRGGE RRFDRNKGGDHRGSHRGERAPGGRGRGRSERSEG >VF0485 N utilization substance protein A MNKEILAVVEAVSNEKAVPRERIFEALEIALATATKKKSEMEIEVRVAID RKTGDFETFRRWVAVENVENPTLEISIEAAQFEDETIEIGGYVEDDIESV TFDRITTQTAKQVIVQKVREAERAMIVEQFIDNEGELITGIVKKVNRDAI IVDLGNNAEAVILREDQLPRENFRPGDRVRGLLYAVKPEARGFQLFMTRS KGVMLTELFRVEVPEIGEELIELKGAARDPGSRAKIAVKTNDKRIDPVGA CVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPAEVASIIVDE DNNTMDIAVEADNLAQAIGRSGQNVRLASQLTGWELNVMTVADLNKKHQE EAQGSIDAFVKHLDIDADFAQLLVEEGFTTLEEVAYVPVNELLEIEELDE DTVDALRTRAKEALTTLALAQEESLDGVEPAEDLLALEGLERELAFKLAA KGVITLEDLADQGVDELSDIENLTEERAGELIMAARNICWFSDEE >VFA0523 DNA-binding protein MRFLRLKEVMALTALGRSSIYKFMSEGRFPQTISLGDRAVAWVESEVEEW MHERLSQRDEKQA >VFA0978 transcriptional regulators, LysR family MDTRLLTYFVSIAEHKNMTHAARALHIAQPALSVAIKKLETQLELELFRR DERKMILTHEGEVLLTHAKQILQQLDDATLAMKELRGLEKGEVRLGVPSI MGTYYFPDVLMAFKSRYPKLKLTIVDAGAQSIQKMLLDGEIDLGITQIRN LPDELDSDHLLRSQMVAVVSNEHEFSDKKSLTFSEFFSQELVMFKQGYFH REKLDAICKQEGLNANFSFETNLLAVIMKIVKRDFAISALLELATENEPD IVSIPFSEPIYLDISIAWRKNGYLSRADRTFLEFVKQNH >VFA1148 transcriptional regulators, LysR family MSLVNQLSLFIDVVQQGSFTKAAALHDMDNSALSKQIKKLEAELGVQLLN RSTRTFSLTPAGEEILEQAYQLVGSLDNVKSIADSYQAVPKGRIRITAPL HIGQGYLQPVISQFMTTYPDVEVVLMMDDKRSDIISEHFDVAFRLGRLDD SSLIAKKVADIRGVILASHSLIERFGEPSTPEELVNLPSVIYSNGTLTVD TVRLGESPDSSQFKSYKMKGNYKVNDVRTLLSAVQDGLGYAVVASSNLER SIESMGLTTLLTDYPLCNQGLAIYALYPHRKQTALVREFISAVQKHIGHP PLWEQHIPNFASLYPVKKGQ >VF1469 transcriptional regulator, MerR family MMGCMMIYNPKQLANHLKLIRTKHNLTQTELAKKVGVKQSTLSSFENHPE TTQLQTLFKILHALEVHCIIQEQVPASHEDNLDDEAW >VF1767 cold shock protein MATGTVKWFNNAKGFGFICPEGEDGDIFAHYSTIEMEGYRTLKAGQAVTY EIHEGPKGFHASEIKLLEGENAK >VFA0739 acetyltransferase MEIVIRRTEVKDIDGLCELYSQPQAQAQTLQLPIPSRALWEKRLSAIPDN VYSYVALIDGKIVGNIGFEHVTRPRTQHVAHFGMGVHDDYHGRGVGSKLL ETVLDLADNWLNVRRIEIDAFVDNHAALRLYKKFGFVIEGEAIDSAFRNG EFINTYYLARINRN >VF1072 transcriptional regulators, LysR family MKHKIHQLDLNLLKVFTVLLEVRNTRKASERLFLSQPGVSRALARLRDFF EDELFIRSHYGLTPTPKALEIGDNIAPAMTLLFSALEPSDKFDSSQLEGR INIAMNGFIAPSIASNLCGIILEKAPNVEVVFSNWDRATPENILHDQIQL GLNYFPLEISKQLSQSVLTTDRFVLIGRKEHPLITGEESFENAAQLDIAT LVIPNWNEHKAYVVNSLKSLNKECRMRLRSSYLDVILNSIQRTDMLFPCS ESLANTLGSDFQKLLLPDDVIQPGGEIGLVVASKNRRTPLIKWLKECTQE AAAEIKTYNLSQ >VF2427 conserved hypothetical protein MNLTVSHLDKLRLPLLHKIYKENYPSGKPKGKEEIIVIEGDKKILGAMRI KTYEECHFLTGMMIIKERRGESLGSQLLFKLNEFLSLEHCYCFCEPQLSE FYLKNDFIHIDKKNIPHVLKSKHDRYTNTGKELDILLYKKTNN >VF2093 RNA polymerase sigma-E factor MSEQLTDQVLIERVQRGDKQAFNHLVVKYQNKVCNLVARYVKNSGDVPDV AQEAFIKAYRALPTFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPASDVD AEEAEYYEGASALKEITNPENLSLSEELREIVFSTIDGLPEDLKTAITLR ELEGLSYEEIAAVMECPVGTVRSRIFRAREVVEKKIQPLMQR >VF0400 toluene tolerance protein TTG2F MDSAEIKELLDAALQLEEIHVKGEGSHFEVIAVDASFAGMSRVKKQQTIY GPLMEHISTNTIHALSIKAFTPEEWARDKKLNSLF >VF1633 fatty acid metabolism regulator protein MVIKAKSPAAFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLRE VLQRLARDGWLTIQHGKPTKVNNYMETSGLHILDTLMTLVDANNATSIVE DLLAARTNISCIFMRQAFKTNKEGSLRTLNRVIESCEQLLAAESWDSFIE ASPFGAKIKAEVKEDNEKDPVKREEILIAKTFNYYDYMLFQGVAFKSGNQ IYGLIFNGLKKLYARVGSYYFSNSEARELALQFYRDLKLICEEERKDAVM PRMRQYGMEGNLIWNEMKLNLPSNFREDDS >VFA0496 Mlc protein MYVAQPGHIDHLKQVNAGRVYKLIDQLGPISRIDLSKESNLAPASITKIT RELLDAHLIKETQVQEANSRGRPAIGLEVDNEGWQFLSLRLGRGYLTIAL HSLGGEQLIEERQLIKEIEQDELLAKLLNEINVFFQKHSKILGRITSIAV SLPGLVISSQGLIIQMPHYNVKNLPLGPKIYESTGLPVFIGNDTRSWALA EKLFGNSKNIDNSILVSIHHGVGAGIIMNGEVLQGRTGNIGEMGHIKINK LGARCHCGNTGCLETVASAKAIRDQVKNLINNGHQTVLKDQTITIENICL AANQGDVLAKQVITELGHNLGEAIAIMVNLFNPEMILIGGEINLSKDILY PIIMDSIQNQVLPLYAKDTQLVESRFYTQATMPGAALVKQAMCDGSLLMK VIEG >VF0476 transcription elongation factor GreA MDKVPMTVRGEKLLRDELEVLLKRRPLISKAIGEARELGDLKENAEYHAA REEQGICEAQIRDIEYKLSVAQVIDVTKMTNTGKVIFGTTVTLIDVNTDE EVKYQIVADDEANIKEGRISVNSPIARGLIGKMEGDEVNIQTPGGTKEFE IDAVDYI >VFA0991 hypothetical protein MKVEIEPQTLRYQPKEIRETKRPTIAYEHPNALTYLKSMKENIIRFANKK SLYTQHDEYIKNVFMDERVNLKYHCESIVSYIAEAFIHYSVWDHSHAYYP GRPSQQTARTDALEGTSRTLPTLAAWLHANGRSNTIITGLNQQPILVPEI LRKAFLAGTNPQHKGYWGTLHHCDQRVCEGADLALALWMSKEWVWDCFSI DEKCQIITWFKQVNQCETVDNNWHLFVLTVQIVLKALTGEDEVQYDKYER VKEFYVGDGWFRDGAKGNYDYYNAWAFHYSLYWFTQIDVDFDSTFINNAL SDFVGNYRYFFGKEGFPFFGRSACYRLAAAAPLLAAVDLQSDKITIGEAK RAFHCNLKYFISNGALKAGLPTQGLFDEDVRLVDNYSGPASSLWSLRALN IALFCGEKINLWQAEEAPLAIEQGNFELDISAINMKILGVYETQEVIAIF KNEYTQDQSPLSRRLLAPSRWEQTIEKITGRANRPKNNLLRKGITCYSSK MESFF >VFA0791 transcriptional regulators, LysR family MEIKWLHYIPIYVALCEERSIAGAAKRLKCSNAHISRQLQQLESILSVQL IHRTTRQFNLTYDGIEFYKQAKHLLDSAEAINAKLLSPESMAGKLRIAAS ASFGSILLTEPLAEFCRTYPKIDIEVIFTESPLDLIELGFDVAFYLTNSP PEGYVGHYFRSLQCKPFAHINYMRNQGEVTHPSHLNKLNHILYKNTDFTL NNWTFNNIKSKENIAINLEGSFSVNLVASMVDAMLNECGVAMLDELALSK LSQTKRNEIVQLIPSWETQPILPLYLLYPKRKHLPQRTKLFVDFFRDYLG NI >VFA0259 hypothetical transcriptional regulatory protein MLNKNLIRFKDITFNPKTNQIIKNDCTIKLTHSESKILKLLLTSPNKVFS KDEIFTHVWEGTASNIGVVPQTISVLRKKLHYNEIYLIETVKKKGYKADV NGTFFEKRKLNKNHLFLSITIIISFCLSLVAFEKHILNTKSSDEIKIEEL MPNVFQTSDSLPFIFDPTVLRSNTTYYINRQPNNLNISACRQIGTHCDLT YNKIIFLQNNESNTVITQYIQDVKFAETMYKDELNTNPIRFNYAARIGVK SENDNYYSGQVIANYNLKQRNNKYVYNKVSIVIDETGFAGQCSYTREPEK PFLECNEGDCASYVGSISDPKKAVAYKNLFQYPTTGLNILLFPIDDDVSL FYNTESGLSYLVYQYS >VFA1054 acetyltransferase MIIENVLPKDYAEMLSVWENSVRATHDFISDEDIEFFKPIIMEHAFPSVT LRCIKNNNGAILGFIGVLNQKIEMLFILNEARGEGIGTALLTYAVNELNA ESVDVNEQNPQAVGFYQHMGFKVESRSELDDMGKPFPILHMKL >VFA0785 transcriptional regulator, AraC family MSTDFEIDKSFNRIENILVFIHQNIDKPLTVEILAEMSCWSRWQLQRVFQ NYTGMNVAQYVREQRLSMSALEVLDKKKRMLDIAYSYGFTSEIAFSRAFK QYFHKSPREYQKQAKKIGIQKPFLKQVNVDPLLNSHFYRVRLEYKPSFKV LGLSTRVQGILSDTPDFIEKVPSVWNALDTYITCLSSIPEQKYAVIDTRE ENADFLLYWAGISCDALSIDELNLHKADLQIITIPEQEYAVLPFKGAAQD FSKSVEWLISEWLPTSGHQGIEGFDLEIYRSDTTQGIIDVEYWLPIRSL >VF2003 phage-related protein MTNQLTFQNTHFNLIEQNNKIWLSASQIGAALGYKDTSALNRIYARNIDE FSSSMSGSVKLTDPRGVEQNARIFSLRGAHLLAMFSRTNKAKEFRKWVLD VLDKETSPQKNDYLQSHPKRRTRILTMLEMDSVVSVTPVPDDAMVFAPSD IPSIVREPGFFKVKDLLEIANAVNEQLRLICK >VF1408 glucokinase MYYGFDVGGTKIEFGAFNEKLERVATERIPTQTENYSLLVDDIASLIAKY DAEFGVEGKVGLGIPGMEDAETGALLTSNVPAAKGQFLRKDLEAKIGRSV KIDNDANCFALSEAWDEELKDSPSVMGLILGTGFGGGLIFDGKAFSGYSH VAGELGHSRLPIDAWFHLGENAPLLECGCGNKGCIDNYLSGRGFELLYAH YYGEQKKAIDIIKAHAEGDANAVEHVDRFMELLAICFANLFTCFDPHVVA LGGGLSNFELIYEELPKRLPKHLLSVGRVPRIIKAKHGDSGGVRGAAFLN IKD >VF0803 transcriptional activator RfaH MKQWYLLYCKRGEQERAKLHLENQMVECFYPEIVVEKIVRGKRKQVKEPL FPCYMFIYFDFEVGPSFTSIRSTRGVSDFIRFGAQPKVLQGDLIYSLKAL DENNNKEKLECLPEAGQKVAIKEGPYSGIEAIYKEADGEKRSILLITLIN KKVEIKIPNSDIEY >VF2299 hydrogen peroxide-inducible genes activator MNIRDFEYLVALAEHKHFRKAAESCFVSQPTLSGQIKKLEDEVGLALLER TSRKVLFTEAGLQLVEQAKKILLEVKRFSELANQQGKEMTGPLHLGFIPT VGPYVLPWIVPTLKAQFPDLNLYLHEAQTHQLVKMLEEGKIDCMILASVE ETNMFIEVPVYDEPMVLAVPKDHKWAKEVSIDMSRLSGESVLMLGDGHCL RDQALGFCFAAGAKDDDHFKATSLETLRNMVAAGGGITLMPYLSVPKEKE RDGVCYLPAQDPVPHRQIVLAYRPGSPLRARYESLAKEIENKMSNVIRS >VF2510 transcription antiterminator, BglG family MIQLPYPRLNVIFEALRYEALPQQELAQRCDISTRTIRTDISALNDILAS YGAQIQHQRGKGYHFDIYDETRFLDIEKQTKKMKSSPRNAKDRMVYLMMR LLSQEEECKLDDLANQWFVSRTSLQADMGEIREQLEQYNLELISKAHCGL RLFGEEQAIRACIAHILFQFKPSDHTFIDVCEYFFPEINQPSLKTDLLEL INKNHIKLTDEGLHHLVVYCGVALHRLKQNACIHHVDQPNLSEEAQKTAA ELSQTIESLLGAPLPQAEIDYLSIQIAARRVTGVPEIDTQKPTEQLELTQ YLLDYVNTHYNYDLRNDEQLKRDLLCHITTMILRVKYQITIPNPLFDHIK RYYPLAYDMTVAAISHWGKHLIPDGEIGYLVMHIGVGLERNFSLEEQLPP KALLVCDSGTSIVRLLESQLIRSLPQLTIEKVESLRDYEELSKVDADFVI STEKVSQKNKPTITVSPIPTSFQLEQVNKLILMNRSHPYMLDKFFDHRYF SVLDEPMTQGEVLKKFSAHFTEDNITPIEFYDSVIERESITSTILGEGIA IPHSLGLLANETKVYTIISPHGVDWGNGKIAHVIFLFAINKDDYEEAMSL YDLFVTFMNGKAVDTILGCHSYDEFQYVAKECWFNRKKDW >VFA0688 hypothetical protein MGFCASLLLNALRVKLKENDLTYNELSLKVNVPISTLKRHFHSNSIGIDK LMEYATVLNTNLEELSQIARDIHNKEEGTRTEVLDEIFYNHPYLYDFFYE VHVKGKDVQEVANENHLNEQSVYIYLRALEIMGLVELKSDGSPCFLTPPY YTFFEGSKLDTLFTEKLRLEVLSQAKRPVVGMSRVCLTQEQIDQVSEMVY EKIQHFHFQNKESKESEDIRKNILLNVTEGNYIHLSDGLINIESGLLKEL YETINSDELL >VFA1109 transcriptional regulators, LysR family MAFNSALFDGMVIFSEVVTSGSFTQAALNSGHSTSYISKEIGKLEERLGV RLLHRTTRTLRLTPEGELYFQQCQQLIEDAQMAENSITGQQEKPKGRLKV SCPVGFALSRLRPILGKFTDLYPDIILELDLNDKKIDIVAEGFDMAIRAS HQLEDSSLISRRFLRSKAITIASPGYLKKHGAPLYPHDLSSHKTIGYAYV KQGAIWDFFDKNKQPFSVQLNSQVITNNSFMALSLCLAEQGITRIPHFHL TDELETGKLVELFADYPKLTIDIFMVYPSRKHMSAKVRCFMDFISEHLGD >VF2450 RNA polymerase sigma-32 factor MSKEMYSMAVVSQDSIDSYLRSVNSYPMLTVAEERELAERLHYKEEIEAA KELILSHLRFVVHVARGYSGYGLPLADLIQEGNVGLMKAVKRFNPEVGVR LVSFAVHWIKAEIHEYVLRNWRIVKVATTQAHVNCFLI >VFA0031 transcriptional regulators, LysR family MDQLSAMRAFVRVVETGSFSATGKEMNTSQTTISKKVAALENQIGVKLLT RSSRDHSLTPAGSDYYQTCVNILSELDEVEAKVRSKATLPQGSIRITAPV AFGRFLLAPIVAEFFQHYPDIKIDLLLNDKHVNLISEGIDVAIRAKNLED SSLVARHLLDNPMYLFASPDYLEQYGEPKHPNELSTHNCLIYSGLQDAHI WNFNHGEKEYSVPVKGNFQSDNGDVLLDVALTGVGIVSLPIWMAKAHLTS GHLRQIMTKYSGQQLPINAIYPQRRYTPLKVRCFIDFLKQKLSE >VFA0553 ATP-dependent RNA helicase MTGYLSIILEIGVQLLQFKDLGLDNRLLKNLAHQNIKTPTEIQRKAVPVA IAGKDVLASSKTGSGKTLAFVLPMLHKSLKTKSFSKNDPRAVILAPTREL AKQVYSHLRAMLGGLTYDATLITGGENFNDQVNALRKHPKFIVATPGRLA DHLEHQSLYLDGLETLILDEADRMLDLGFAEHLQKIHKAASHRRRQTLMF SATLDHDAVNKFAGNMLDNPKRISVGLSNDEHKDITQRFYLCDHLDHKQA ILNKIIETEDYFQIMIFTATRSDTDRLTKLLNEENLKAVALSGDMNQTAR NNIMSQFERRVHKILVTTDVASRGLDLTSVTHVINFDMPKHMEEYVHRVG RTGRAGKKGTAISLVGPKDWESFKRVETFLQQDLSFSVFEELKGKFKGLK PKHKRTFVKKGDPKKFKAKGNQNKPKAPKKRDNSFHTNVAVGDQVFMPKK KPKQIVVDDE >VF2572 chromosome partitioning protein ParB MSNKRGLGKGLDALLATSSIAREKQTAAAQSESISKDAQLVELGIHQLSA GQYQPRKVMEEEALEELSASIRSQGIIQPIVVREVASQQYEIIAGERRFR AAKKAGLKHVPCVVKSVEDKAAIAMALIENIQREDLNAIEEAQALERLQQ EFELTHQQISDVIGKSRTTVTNLLRLNALTDEVKGLVEQKELEMGHARAL LALENEQQVELAHLVIKKKLTVRQTEQKVKELLAPQKEEEPKEVDTEMMT ISDKLSSTLGSKVVISRNAAGKGKVTITFDEAHKLEQLIAKLES >VF2391 DNA-binding protein Fis MLHCNSLNLKAISTTLHHNKRRAKQNMFDQSMTSEALTVTTVTAQDQITQ KPLRDSVKASLKNYLGQLNGQEVNDLYELVLAEVEQPLLDMIMQHTRGNQ TKAANMMGINRGTLRKKLKKYGMN >VFA1122 L-2,4-diaminobutyric acid acetyltransferase MYLHMAIAAPRILCPDMDSDTTKKWIFREPSRTDGDDVYALITECPPLDI NSSYCNFLQATHFSKTCVLAEKDGDLAGFISGYQEPDEPNTLFIWQVAVS PRYRGKGLAFSMLTTLLERKNLLHIEFIETTITKANNASWSLFKKIDAQY GNQGQVTTFLDKESHFKGKHDTEYLYRIPLKSSQK >VF0275 arginine repressor, ArgR MRNNEKQELLVKEFKAILKAERFGSQGEIVDALRQSGFDNINQSKVSRML TKFGAVRTRNAKMEMVYCLPVELGVPTVSSSLRELVMDIDYNNALVVIHT GPGAAQLIARLLDSLGKAEGILGVVAGDDTIFITPTRNIEVAELFDSVCD LFEYSV >VFA0852 transcriptional regulatory protein MEIAHSLQQIKSSYIREILAAASDKNVISLAGGLPDEETFPIEIMKPILE SLSDMPDVFQYGATAGYAPLLEFLTQKFELPENHLPMICTGSQQGLDLIA RAYINPGDTVVMEAPSYLGAMQVFGLVQASISTVSQTEFGPNLEELEQCF IQESPKMFYAVPDFHNPTGVCWSLETRKKVAELCIQYNVAFIEDAPYREL RFTGEALPMVSTFCPQDSIVLRSFSKIASPGLRIGVVTGKKSYIEPLIKV KQGADLHSSVPMQALLLGLLKHEKFEQHMQTIQTLYKQRYDVLYNELKVQ LPAQCEVNSVDGGMFIWVSLPDCDTFELASTLIANGVAVVPSPVFYPKPE GSPAALRLNFTNAKPNELVEAVNRLTNVLNKSVN >VF1419 transcriptional regulators, LysR family MSVIMKSTELNLIPIFVAIYEEKNLSKAAIRMNISQPAVSKALKRLREIY DDALFHRNTTGVEPTVFASDIYPAMSAALKNFTSTLSASREFDPKTSNRI FSIAVVSTVNYSLIPKLVKQLRSSAPNISLEIHPQFTEDLESDLRLQRYD LVIDMAIRGRTILKSEVVYTERLRVVCSKDHPRIGDSISLEQFLSEEHVA ASRWHSRSSLLNAEDIGELEARNIVIRAAGAFEMMPIIGSTEMIGMLPQS SIDDLGDYYNLKSLDLPLNRQQHDLCSIWHPSRSNDSGHRWLRQQIQKAA KNVF >VFA0053 transcriptional regulators, LysR family MMINRINLTDIRSFVLIARLGNFTKAAETLDVSRSHVSRQISSLEKQMGV TLLIRTTRTLRLTEAGKHFYHQCEQALHTIDQALLSAVDDVEKVQGEIKI NCVGGYLGEVFLADIVNTFMQQYPDVSISLDFSSNRVDLIEEEFDIAFRM GSLEDSGFVAKKLLDIEMGTLASPKYLQQYGRPSHPKELQQHHCLTGSVR KWHFQSLVNKEHYDVSIKGNLQCKNGRVLVAGAIAGNGIIRVPLIYCQQE LDDKKLVQVFEEWGIPTVDFSAIYHRDRYQPKRIRTFIDFVKQYSDSLFT >VFA0911 transcriptional regulators, LysR family MMKEDWLLFAKVAQYQSFSEAARRLSTPTTTVSRRIQQLESQLGERLFIR NTRSVTLTEFGQRLLPKTKLLEMALEELQSTIESHSQEISGKLKLSTSDT LSQFLLPSLISSFSSQHPLINFDISSSNRNEQLLNENIDFSFRIGQLEDS NLIAYKLCEIEYVLVAAPSFIEKSTIGITPETLIQHPCIIIDIDGKEVPW FVSSDDHVLELTTYKKYRVDNLFIAKSLAESGNGITLLPKFVAKEAIKTN TLVTVLDNVNIQKNPLSLIYFDKHFLSEKSKCFLKYIKEQRSHIESVINP TI >VF0120 transcription accessory protein MIINIIAKELNVRPQQVSAAVQLIDEGSTIPFIARYRKEVTDGLDDTQLR TLDTRLTYLRELDDRRQSILKSIKEQDKLTPELEREILDADSKTRLEDLY LPFKRKRRTKGQIAIEAGIEPLADLLWTQPENTPEDAAQSYIDEEKGFAD TKAVLDGARAILMERMAEDANLLEKVRTYLTANAELVSKMVDGQEQAGEK FKDYFDHHEALTKVPSHRALAMLRGRNEGFLQLSINADPTQEEGARGSYC EIIIANHYGITLGSQPADLWRKQVISWTWRIKILMHMETELMGGLKERSE NEAIDVFATNLKDLLMAAPAGLKTTLGLDPGLRTGTKVAVVDATGKVLAT DTIYPNQPHNQIAKSAQIIEALIKQHNVDLIAIGNGTASRETDAFVGNLL KDAGLSTAKIIVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDP LAELVKIDPKAIGVGQYQHDVSQSQLAKKLDAVIEDCVNAVGVDVNTASP ALLTRVAGLSATIAQNIVDYRDENGRFENRTTLKKVARLGPKAFEQCAGF LRVMNGKNPLDASAVHPEAYPVVKTIAEKNGKAIDAIIGNTEFLRSVAAN DYISADFGLPTVTDIIKELDKPGRDPRPEFKTATFADGVNTVSDLELGMV LEGVVSNVANFGAFVDIGVHQDGLVHISALSDTFVSDPREVVKAGDIVKV KVMEVDVQRKRIALSMRLNDKPGEDNRPQRQSNKPQQRNERSQAPRQQRN NDVGGGAMGGAFAAAFAKAKK >VFA1048 transcriptional regulators, LysR family MDKFSDMTMFVSIVKHQGLAAAGRELGLSPATMTARLQALEERYRVKLLN RSTRHVSLTDAGELYYKASLEILDNVNETENLILNGVKEVKGALRVAAPK DIGKQYILPILSEFCEKYPDVVPYLYLNDDVSNIAESGIDIVVRYGELAD SSLISRRLSSSHRVLCASPDYLAKYGTPLTPQDLINHHCLAMVRSHEELK TWHFQGSDKKNVITVLPKRFSDDGEVVRYWALEGAGIALKSILDVQDDIN NRRLVTVLNGYMANFNTSTSVSSADLNVVYMSKKYQPKRIRLFLDFLLER FETMKNGGK >VFA1015 RpoS-like sigma factor MAYAKLDMRVCEEQGLNDSYSLYLKEINRYQLLTAEEELAYSRLYKKGDV SARNTLIESNLRLVVKVANKYRKRNQTDLAILDIIEEGNLGLIKAIDKFN PELGYRFSTYAVWWIRESIESALFNHSRTVRLPVHITKELNTYLRAAREL SKSLKREPSIRDISTYCEEEQIKVSKIISLIPNQLTCHSACSDELSPKFF ELSSNNKALEPDSSLSQNNLEMNLSSWIDSLNYREKEIIINRYGLFGCKV KTLEDLGKDLDLSKERVRQIQSETLIKLNTIFKKNKLDLEIALG >VF1475 transcriptional regulators, LysR family MHTLEQVSAFVAVYEHGSYSSAARELKKSRTTVREHVVTYEDLLGYSLFV IEGRKAIPTEKAEQLYHRAKLVEKQNRSLFVQSQALYDSNVHTITIYYDV ITPLSLITHIENRVMDYNSDIIINWKHRTRQEAMDKLQEGECDIAIMPYR GQLFAEKEVTWKAIKPIQVGCYASVNSPLALIDDLRLENLMLETQYVTEN FATLKLNFASIQVSPKMHTVSNNDLLCELVKQHGWTIMPRHYMTPYVERG ELVDLNLKELGNNLSFGLNAFYCYGKPDAEVFGFILEWIEEWTEALERC >VF1386 acetyltransferase, GNAT family MESKMKIEIHQGAVADVLIVDQQIPEFDNRNTHEKLTQRLSDKKHLILVA VSEGIPVAYKMGYQLSDSEFYSWLGGVVPSARKQGIATQLRVTQEEWAKK QGYEAISVKSMNRYPAMLQLLISSGYHISGYEDEGSSDNSKIKFLKKL >VFA1006 transcriptional regulator, GlpR family MMSAVERRMEIVNVVNQDGKARVEDLAARFDVSSVTIRSDLSFLEKNGYV VRSHGAAIPNTGVIAELTVHEKRHQNIGTKSSIGYAAAQLIENGDTVILD SGTTTREIASNLKSLEQAVVMTNGLDVAMELASASGIEVLMSGGVLRKKA LSFSGSQAEASLKNYRFDKVFLGVDGFDLRSGITTHNEQEASLNRLMCDI SEQVIAVADSTKFGKRSCHMIREFGNIDILVTDSDIPEEYLQGLREMKVE VIIVEKEK >VFA0846 hypothetical protein MHTLAQLQSGELQGITRLQLSEQLTEFPKEILSLADSLEILDLSNNQLTT LPNEINQLSKLKIFFASNNPFTVFPDALAQCENLEMIGFKSCQIKQISEN AFPPKLRWLILTDNQLETVPDTLGECNLMQKLALAGNKLTELPDNLSQMH NLELLRISANQLTKCPDQLLDLPKLAWFAFAGNPFCKSDLKIKSVPTVSS SDYTLENVLGQGASGVISKAHWNKAQTDFPQEIAVKVFKGEVTSDGYPED ELQACLKVGNHPSLVQSLAQVNEENHLALIMNLIPAHYKNLGLPPSLESC TRDTFPNGFSLSLEKINKMTSEMCNVFNHLHDNQVCHGDLYAHNTLFDNE ANIIFGDFGAASMYHMLSTTQQQKIRTIEERALNHFIDDLMSVCEH >VFA0387 transcriptional regulators, LysR family MVMRYSLKQLAVFDAVATTGSVSQAAELLSLTQSATSMSLSQLEKMLGRS LFERHGKRMALTHWGVWLRPKAKKLIHDAQQIELGFYDQHLISGEISLGA SQTAAEHLVPNLISNIDNDFPEIRISLGVKNTSGIIEGVLDYKYELGIIE GRCDDSRIHQEVFCTDHLIIVAAAHHPFAKHEKVSLAQLEQAKWVLREHG AGTRTIFDSAIHGKIPDLDVWREYEYVPVLRTLVANGQYLSCLPYLDVVK YIERGELVALNVPELNMERTLSFIWRSSMDQNPISDCIRREGIRMIKNHN VIR >VF0296 hypothetical protein MKQSGRPKGESEVREKLIFHARELFISMPYNKVSTRLIATNANVNIAMIR YYFGNKEGLFEAMFKETIAPVTQQFQRLLKDDTEQDLVEFMRAYYKAMIK VPAFPKLILRIMDAESEQQAALQQIIIGILQPMQNKLFDPQKSKALFKNG VDPIKARLSLMSLMIFPFLAPKKMLELHNIELNETFLMELLEHNIRLLGE GLLKNKRDTDNENK >VFA0582 cryptic phage CTXphi transcriptional repressor rstR MIKERIKELRSSRNLTQEDVANAMKIAKSTYIKYEKGTQSPQLETIEVMA KFYGVDISEFFDEKKPDLDLQLMSKLELINQLEKDEKESIILMIEGLIFR RQNINLSKRLA >VF0667 N-acetylmannosamine kinase MKPCLTVDIGGTKIAAAIIESGKVLRRQQIATPSSSQPEEMDKALEELLT PFLDDISTVAVASTGIIDDGVLTALNPLNLGGLNNYPLRAVIEKITKKPT TVINDAQAAAWAEYQTLELNMVNMAFITVSTGVGAGVVINDDLLIGANGI AGHAGHTLADPNGPICGCGRRGCVESIASGTAIGQAGKTYFGDNCTGEMV FKHFSQNDPNATDIVNGSAKAIANLIADLKMVLDIELVALGGSVGLAPHY LELVQHYLAQQPSPYQTKVQHARCGADAGLIGVAHWASKIR >VF0387 RNA polymerase sigma-54 factor RpoN MKASLQLKMGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLDVE EEALSTPETLTSPEPKSEKETASAEQETPITDSSDVIESNNISEELEMDA SWDDVYSANSGSTGLAIDDDTPIYQGETTESLQDYLMWQADLTPFTDLDR TIATTIIESLDEYGYLTSSLDDILESIGDEEVEMDEVEAVLKRIQQFDPL GVASRDLAECLLLQLATYPANTPWLPETKLILKDHINLLGNRDYRQLAKE TKLKESDLKQVMMLIHELDPRPGNRVIDTETEYVIPDVSVFKHNGKWVVT INPDSVPRLKVNAEYAALGKTMGNTPDGQFIRTNLQEAKWLIKSLESRNE TLLKVARCIVEHQQDFFEYGEEAMKPMVLNDIALDVDMHESTISRVTTQK FMHTPRGIFELKYFFSSHVSTDNGGECSSTAIRALVKKLVAAENQAKPLS DSKIATLLAEQGIQVARRTIAKYRESLGIAPSNQRKRLL >VFA0348 Ebg operon repressor MATLKEIANEAEVSLATVSRVLNEDPTLSVKEETKRRIFEIAEKLEYKTS STRKLASALPKIAKEQLHFLALYNYKQETEVNDPYYLAIRHGIETQCDKF DITLTNSYESSLDIKNSKVDGILLVGRQTKEQLKAIQKISKNIVYIDYTD HEQNFDSVDIDLARISKEVINYFMNQGYQRIGFIGGQDDENCSDIREEVF AEYGQLKGVVSESDLYRGDFSSSSGYKLAKEMLETDYPNAWFIASDSIAI GVLRAIHEKGLRIPEDIALISVNDIPTAKFTFPSLSTVRIHSELMGSQGI NLLLERRRDERAIPVRVYIPSKLRLRDTTKK >VF0105 DNA-directed RNA polymerase omega chain MARVTVQDAVEKIGNRFDLVLISSRRARQMQTGGKDALVPEENDKTTVIA LREIEEGLITKELLDARERQEQQEQDAAELAAVSSITHNR >VFA0669 hypothetical protein MISGTKIKTFTDNIMAFRELVHDEIHPMQMVAFLEVMSTLPLTVSANHLC ERFGISQASASRHCRVLTDRAGPNRKGYDICCWVYEPSDHRTKYLELTEK GRDLVEILNKRFK >VFB18 DNA-binding protein RDGA MKEISIRLKEKRKALRYSQRKLADLVNVTTSAISQWEREETTPKGEHLVR LAEVLNCTVQWLVGTEDDICEYVDIPFYEQVKASAGHGFLCECKNVTYIS LPKALFKYFNVKDLLAITAHGDSMEPVLNDDALLVIDSSKKQIRDGSMYV IRQGDLIRVKLISLDNNGLKLKSYNQSYHDEIYEDYQDVEILGKVIWYSS LCL >VFA0231 hypothetical protein MNNIDVYVNKKERLLTDNMSLNVYLTKYEFKLFICLLNSPGVNQTNEVLI NTIWNDNGKDSSNLIQLISKTRRHLKPLEHVFKIKSQRGEGYSIVVNNNY NFINNCFRANEVEYSDNKETLTLDITDKMFSKELVLSLLISIIVSLYMSN RTLFFPDINTINDRFIGMNCYKDKMIKSTYKFDCEKSGIDFSKSKNYVLS TFDEKIVYTEK >VFA0584 hypothetical protein MFSVTSFFKAFSVALILGVCAVLFALWKHSSSQLNYASRDMDWEWSWMYY EPFSNGIQTTRTKDTKQLLFRRVDTSSKLTTVVNITYTNKLEIIVTYEDS CLSGSFFPAKLKLNQTPQQQISFQCEKNGRGYLFRRTANQLTSVQIKSDK FELKENFSEWPIDELKKDQFIQQHSNFFKGKGQSDVYEWSRD >VFA0240 SUA5 protein MSNKIKFHNFTLLINEKKIITKSNKEIKLNSVERNILSLLIQNPTVIFSK EEIRNHSWCKEIKCHSSVVPQAISLLRKKLSMHGLEPIETVKGKGYKAAH LVQEQGMGMYSALVLFLSMISILILEYPVSNLGNEKLTSFKFKKINNNIV TTSASNKFDTSNLKLEDDVKYFINNQNNFISISACKLKKNICINVYNAIY FKKESTPIKMADLISNVKFDDDMDLLLVKKDKLTSLSAEIQLRSLNNKKY NGELFINFDLEKTNNNDYFSKKTTYIKESGYSGGFGYASVNKITPIKNKN HHKYLIKKIDDDNLLSLRFQFGMVKNSKMTYAYNLLSGPREKQSYSYSYP ISKNISYYFNDEMNISYIAYKHT >VF0136 3-deoxy-D-manno-octulosonic acid kinase MKIIRNKKQTIWYDDSILNDSPEQCCNPNYWQQQNRIIGSAQGRGTTWFI ALEKMDAALRHYRRGGLFGKLIKDHYLFTSWEATRSHQEFQLLKVLRSAS VNVPKPIAARATKRTFCYQADLLSEKIPNARDLVAILQEKPLSEEMYQKI GNEIRKMHAVQVNHTDLNIHNILIDDNDKVWIIDFDKCYQQKGDDWKQSN WDRLQRSFKKEVNKRQIHWSENEWSHLLSDHHTM >VF0864 hypothetical protein MYTLRPYQQDSVKAVIHYFRKHTTPAVLVLPTGAGKSLVIAELARIAKGR VLVLAHVKELVEQNHAKYEGYGLEGAIFSAGLGRKETDKQVVFASVQSVV RNLDEFKDQFSLLVIDECHRVPDNKDTSYRKVIEHLQTQNSGIKVLGLTA TPYRLGIGWIYQYHTRGQVKTDTPRFFRDCIFELPIQYLLDEGFLTPAKL LDAPVLSYDFSQLKPASTGKYKESELDLVIEESKRATPQIVQQIVEYAKD RKGVMIFAATVRHAQEILSLLPPTESELVIGDTKLGDRDAIIQRFKNQET KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAEGKTEC TVLDYAGNCYDLYQPEVGDPKPDSSSEIITIPCPACGFNNNFWGKLDSNG FLLEHFGRRCQGYFEDDEGTREECGYRFRAKYCNECGADNDIAARVCHEC DAILVDPDKKLKEALKLKDARILNCIDLTLTAGKNQFNKPQIKVTYFGDD DSEIHEVWQLATKKQKELFLKSFVRPHLVDRHRPFEETAATKIANNQHRF RPPSFVIARKQGKFWSIRDKIFEE >VFA0580 hypothetical protein MKIVAFGYSNSVGLAKSNNEPYDIKNLFVGKPIRQWKTDKGVGEASGHES IEIPFQSNDELLNKIKNIAFPALVELKTEPLPEDPTKNIIIGLDVICTLW DSVPHNKK >VF1385 hypothetical protein MDKIIFQRVTDCEYPSLFSIYKKYLKPTIEEALGWDELYQQQRFNQSYQK EWFDWIMYNGERLGIICTKPDAIRSTIHIHLLIVFEKYQNKGVGTAVMKC YQKHYSDAVTKSCLSAFKVNKSVINFYLSLGYQIVREDEHFVEMERSLCF SGYMGES >VFA0415 hypothetical protein MYHPLSPNLDLGSFLLVRGKKTYIEENLLLRVKPIDIDGTEYWVPIGINW NSGQSTKRRRMEFAQVRFARKGQPYYSKAYYADFDNEDDDLEARSEAIIE AAWSIAELVEQNEYETADDARKTKTFTAKSVYEGLHPNIQLKVSMVNGTP YINSHFERHESKRCYRSHNFSRSLYSLNFDDLALFLSDLNAIGKEIDAFL QTKDADIKKFKPSKKLVTVPLSKFAMRNIADQLVQKSMDGCRKEFDKTWF EFKRKPKQIQMIEAEDKSSFTVKKEHTKIGTVIKLDKFKACTHPTHVLRK VALMKANYNWANFKTERKEESAKGKYFKIAHPSSGIVGVVVKKTDNETIF KGIIGQTPRNSYKFKTFSTNSMTEKQAFIAAKQAFIEVIENESWSDYKLT KEFNLYQAS >VF2315 Rrf2 family protein MQLTNFTDFGLRALIYLGSLPEGELTSITVVTETFDVSRNHMVKIINKLG QEGYVKTIRGKNGGICLGKPADQIIIGDVIRAIEPLQVVNCAPEFCHITP ACRLKGALAKAKQAFLDELDKHTIQDMLTDNSELLILLKRI >VF1690 transcriptional regulators, LysR family MKLDDLNLFRQVVENGSYTAASRKTLIPVATITRRIQALEDSLDIRLLNR HARKLSLTEAGQKFYDECAPILATLVNTSEYLGEECRGAAGKLKIAAPSN LTKRMIQPILNKFMLLYPDISINLTMSNQPEQLDPTDWDIIFRVGKQRDS SLIARQIGSLEDILVASPSYLEKNSEPTHAQELHKHSLLKGNPLMRWRLT NKDGESVTITDAGRFEASELNVIRMACSNGLGITLMPDIMISQYLEEGSL IRVLSDWSANPRDIYMIYNYKDHQPEKVRLFIDFVSNHIPD >VFA1082 transcriptional regulator, AraC family MKYIQFKNKENINLKSFYTNNYVFAYITGYKGHILINQLPSNISNNQLII IPIHSEFSCHIKKINSTSTIDVIIINKDDINKIIKDLNIDNYKKYNKKGD ILKIENNNIIRTNYSMINILSKTEIDKSIILNQSISFILKEILKDGWNIN NTFSINTKRSVKSLISELVKKSPEHSWTLITVSKELNTTPSTLRRHLKKE NISFSKLLLKIRLGLGLNYLTFSNHSILKVSYLSGFNSSAYFCDVFKKEY HMTPSEFRINSRNNNNLKI >VF0081 transcriptional regulator, AsnC family MNQTSKIDDLDRDILQALMNDARTPYAELAKRFDVSPATIHVRIEKMKAA NIIEGTEVVVNPKTLGYDVCCFIGINLYAARDYHSALAKLDALEEVVEAY YTTGAYNIFVKLMCKSIEELQYVLIDKLQAIDEVQSTETLISLQNPISRN VKP >VF0977 acetyltransferase MFEVKNVAYINKEKEEIRSIRDSVFIQEQEIDPEIEFDGLDSSAVHALVY CDGEAVGTGRILSDGHIGRIAILKAYRSKGLGSKIVLSLIEEAVSQNYER VYLGSQKHAIQFYEKLGFRPYGEEFIEADIPHLSMEKMIK >VF1664 transcriptional regulator, TetR family MARRNDHSHQEIREMALDNVKLFLNEHSHHELSLRKLAKSIGYVPSTLVN IFGSYNLLLLRSIAQTLDELMLQISQGIENSATPEEALKAIAYCYYDFAQ QQPNRWKLVFQHNMNGEALPEWQENRINQMMSILERMIFTINSTKTHEDI VETSRVIWAGVHGITLLSLDDLLFSATPIDGHKLIDNLLLNYINQWKLH >VFA0860 hypothetical protein MNLKFKNSLLMLEDRPKILINNKSYVITIPESKILKLLIENKNTSITKTE LIVTAWGHPDFIGPNSLAVAISNIRKIIEHDGLILKNIPKVGYKLIIDEP LKHQNRTVNINNRERALDNVTLAKNSAIITKLTSSPIQILIFSTLTYFVL YLIHSWVLIN >VF0444 ATP-dependent RNA helicase SrmB MLKTFADLDLSPNLLRALEEIDYQRPTQVQAMTIPEALEGKDILASAPTG TGKSAAFLLPALQHLDDFPRREPGPARILILTPTRELAIQVADEARQLAK YTRHKVFTITGGISYQDHADILATTQDIVVATPGRLMEYIEAERFDCRAI ETLILDEADRMLDMGFGPVVDRLSKECRWRKQTFLFSATLEGRGVEGFTA DLLNEPAEINAEPSRRERKKITQWYHRADNMAHKIDLLKNILTEQAERSI VFVKTRERLAELRGHLETAKIPCAWIQGEMAQESRNNAISRFRDGTVNVL IATDVAARGIDLPDVSHVINFDMPRTADVYLHRIGRTARAGKKGNAVSLI EAHDQPMMERVGRYIKEDDIIKERFIEGLKPKHKKPVFKNKQKKNAKKKA ALAKKKAPKKKKK >VFA0320 transcriptional activator TenA MNHQDLIQACQSQWNEYTEHNFVQQLALGELAHSSFLHYLKQDFLFLKQY TRAYALAIYKARTLAEMRMALPSVQALLDSEIAHHVAYCGEWGISESEME EEPEAFGTVAYTRFVLDTGMSGDVIDLYAALAPCSIGYAVIGAQLLASGS TVLEGNPYANWIKMYGGEEFQKGVEKSVKQLDILLNDIELESQRGQRLCH IFKTATRMEVAFWQQGLDDA >VFA0038 transcriptional regulators, LysR family MNLNFIKHFLAVYDFGSVTKAADYLNITQPSMSSAIKKFEESYGQPLFLK VGRSLEPTDAAHSLAYQVRPIMEQLVMALESPRRLIVSAPEIVLQSLPDM DDALLTESPAVEYQMLDKIRSGEVDILIDDITVTDYTFVTESLGKMDIAF ACRNDHPTILGYSLSLEQFNQAEHVMLKLKNENVGAFETRPDEIFERNIV REVSGPSNLLLSVRNTDAICIVAESMFGLAQELGLKVLESPFPLQPYEIK LIYHRRNITNKTHKYIREQIKSRLSELHQ >VF1095 transcriptional regulators, LysR family MHDRASQMVIFYALAKAGSFTAAAKQMGVSTSHVSKQLGALEETLNLKLV HRTTRSLILTDAGQQFFLYCETIYNAMTEASAIMDDERDEVAGILRLGLS QSFGTMHIIPAIDKLRNQYPDLQVEVRLFDHQADMLKDGLDLWVTNFEDL PEGYVAQRLADSNFVLAASPDYLIDKKVPHHPLDLVEHNCLTYQSRYRDY SNWDFSKGNESLCVKVSGNYRVDLAEAVRDATISGWGIAYLASYLLTNEF NDGKLIQLLPGWKASQKMPIYAVYPSRKHLPRKISAVIDFLREHIGQPPY WDKALMKRVKL >VFA0833 transcriptional regulator, AraC family MMEIDWISPTQIIMLPEERELHSHHYHQLVIGLKGQAEFEINNNLSVIYA GKVAVIPANQEHAFLSLYQSEILVLNFPQFFTDDELASRVKKLFSKMGYY QLDSQIQHLIQLLVCEIQSNIDDHLLSRTCSNTIISLLERHLIDENSAKK IKRLNPDVIDNFITLHLGTKITIAQLASTVFLGESQFYAIFKQEFGLTPH QYIVTKRIEYSKKLLRESTLTVGEIAQQAGFANQSAFSHAFMKKVGDSPS HYRNMNFIRN >VFA0766 rna polymerase sigma-E factor homologue MHIQQVEVVTRVSIADRPNSDKDSSVQIDSWLRKVGETQDKVAFAELFKW FAPKIKMYGLKRFNDQSLAMDLVQETMTLVWRKATLFNRSKGNASGWIFT IMRNHSFDMLRKIQTNKEDTISEDLWPLYDKQVETNSVDFLENKNLEKAL MLLPLPQRIVIEGLYVQGLTQQELSEQLAEPIGTIKSRLRLALTKLRQEY EHE >VF0114 transcriptional regulatory protein OmpR MQENHKILVVDDDARLRSLLERYLSEQGFQVRSVANSEQMDRLLARETFH LMVLDLMLPGEDGLSICRRLRSANNMLPILMLTAKGDEIDRIVGLEVGAD DYLPKPFNPRELLARIRAVLRRQVIEAPGAPSAEDKMIEFGEFRLNLGTR EMFRNEEPMPLTSGEFAVLKSLVTNMREPMSRDKLMNMARGREYSAMERS IDVQISRLRRMIEEDPSRPRYIQTVWGLGYVFVPDGAEA >VF1460 transcriptional regulators, LysR family MLLEGIETLLVLSKEKTMSRTGSVLYLSQSAVSKRITKLEKRLGKKLIEP NGRYVTLTADAKSLIDNIAPTFSELCGRIYEQQALANDSLLRIDCSETLV AGYFSQALSTCFHDDPNFTVTTNHTPRIVENVKSGKATLGLCAGYLPSGH GLLSFHLFDEPFYVVSNKHLDKLPNELITTDLTNSANTHQSVILEALKVN PIMELDSYTAAAHLALQGTAPALIPFSVIKALNIEERYLYQYSELKPLFR PIYICTRQNNYRLERVQKVITALSEHVNIKL >VFA0771 transcriptional regulators, LysR family MDWIESVKSYIKVVEEGSFNAAAYQLNTSGSAISKRINWLEERVGVQLLT RTTRSVHQTEAGLLFYQRARLQLDQWQHLVDETRAINQTPAGLLKIGATL AVGSKFIIKYLDEFLATYPKIKVQLITTLPGQVPEHNVDVFISRELEQLN TFSYKATHLFEHHSGFFASKDYLDKYGTPNNINELKAHNMLIWGERPIKE IKLTNNKRVTLRGNFATTNPEALFHAAKRGMGILLTSQQMVIDDLQSGAL VPILPEITTDHTRVNAYYPTLDYEHTRTQLFIKYLKTKLS >VF0155 transcriptional regulator, TetR family MKTKDRIIHGALTLFNENGERSVTTNHIAAHLEISPGNLYYHFRNKEEII SGIFDNYAKELKTRFQPMAEDQQSNMPSVQVMLSYLDSIFELMWNYRFFY ANLPDILSRDDALKLKYTKAQQALNENLIAIMHSFRDSGLIDLEDDELQA LTKTLHLVASCWINYQTALLSDNEITEAVIYQGMLQMLNVVRPMATEQGR KQILELEEHYKGRL >VF1542 acetyltransferase MAPVIRRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARY LDDPECMVYVAEMDDVIIGFITGHFCELISTVSKLVMMATIDELYIEKEY RREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIH YLRKPLNR >VF1255 transcriptional repressor MATISDVAKLARVSTATVSRVINNSAYVEPVTLERVQSAIRELNYQRDAR ASALAKKTNNTLGLLTGNLADPFFALIAKHVEEVARKHKCQLVVVSGGHD AQREKEGLDFLISQGCEAMVVHAKMLDDATLLRYSAQLPSMVLLNRTIPQ ISNRSVYIDNRAGAKESVVYLIKQGHRKIACVTSDLPIEDRTERLNGYRD AMAEANITIEPNWIINQNFSEQGGELAGEQLLFQCPEVTAVVTFNDVMAA GLMASLHENNIRVPDDISIIGFDDVLLARYLYPRLTTMHNPIDEMSSYAA DLALKIKNTGYVPPSNHRFNASLVERQTVIPFSNKQALKV >VFA0708 transcriptional regulator, AraC family MDLVFNTVLEALLAERESFNQIWFAGDKVTPPACCYQVNFPRLELVISGE YRNQIEDPEFGITEVKVMAGDALYIPPNCWNKPDWSEDCSVLSLLFGRRQ VGFSLVSKRKGEEGFYDVQKYSIQTRTGHAIDNILEALNALAREPNKKQI DEYLLLALLSYSKSMLGEPSEAVSPKKRSEDLYQGICIYIQENFHKSIDR TTIANRFNISPNHLSRMFRQQGHMTLADYITWVRIERAKFMLKKYTFRLT EVATRCGFQDVNYFYRVFKNKTSYTPSDYRAMVKV >VF2268 Met repressor MADWNGDYLSPYAEHGKKSEQVKKITVSIPTKVLQILTDERTRRQVSNLR HATNSELLCEAFLHAYTGQPLPTDEDLRKDRPDDIPAEAKALMTAMGIEF EAFDEE >VFA0025 transcriptional regulator, MarR family MSTTFHGESLMSERKSLESLFTLVHTLKRNLHDQIEELALGITPMHVRVI KIINHKPHCTAIDIANYLHRDKAQVTRLLSSLLTQELIIKEPNPEDKRSQ CLRITEGGKEIMKKISGIDKSMFEKMSMDLSDEEIAEFKRIAEKMARNLN A >VF1321 transcriptional regulators, LysR family MLKQAKQMIVFNALTQQQSFTKAAQLLDISRTQVSQQIQLLEERLGVQLV QRTTRSFSLTEAGQTFAVHCANIADEINEAENELLTNIDNLQGKLRVGIA QSFATNHILPYLSELHHAYPQLNIEITLFDHKIDVIAEQLDLWIGVMDSP PEGFVARHLIDCHFVLVASPLYLAKQGIPYHPYDLKKHNCLTYISRERKD DVWGFHKEDENLQIKVSGNYRIDSADAIRNATIAGNGIGYIATYLLSDEL QAGKLVQLLPDWELNQSMPLYAVYPRRKFLPKKVHVFMEFVRQHINETQI GKI >VF0040 transcriptional regulatory protein MFFEKLAKIDLNLLLTLHLLLEEKSVTRAAQRLCLSQSAVSKNLAKLREQ FNDPLFSRTSYGLQPTAKARNLQEQLHTLLSHLESITEASILILKAVIID FA >VFA0701 transcriptional regulator MINEHKERYVSAEKINMQEAKIVKVEKNNEEQPIAPLDLGQRLKDIRIQL GLTLEEASKRTGLARSTLSKIENEQISPTFQALQKLATGLDIDIPQIFEP PKTKGAAGRRDITLAEQGKPHPTATYEHELLATQLSNKKMVPFKSRIRAR DFDAYAEWVRHDGEEFLLVLEGEVCFYSEFYEPVNLMVGDSVYYDASMGH VLISISKEDAQILWVTAK >VF1545 transcriptional regulator MNVESKWLEDFLVLAKVKNFSQAAELRNVTQPAFSRRIRLLEDTVGAELV DRKSKPIELTPSGKLFRITARTLVNQIEAGISQISDLSQLGGNVVQVAAA HSLATSLIPKMQQAFDEGDYKPILSVEAIDVDEATKELREGACDILLAFD DDILRLPPYQSQLIAKTELLPVSACDEMGKPIYDFISQGAVPWLTYSSTS YMGRQVEIIREQVALTPIFSSSMTDMLKILVLNKQGIAWLPAYSIQEELA QKKVAIIGEQSLRLPIEYYAYRYQARLHPAGEKVWSILCNLDT >VF1378 transcriptional regulators, LysR family MLNLKQLETFVWIAHLGSFRQAAKHLCTTQPAISTRIANLEETLNTALFY RDTGSISLTAKGRELLPLAEKLLSNADQLQVLANSAEAISGILRIGVSET VVHTWLPHYLALIHQNLPHLEVELIVDATINLRKELLARNIDIAILLGVV DEPNVVSQAICNYDLHWVASPALQQTQKNKVLNFAQWPLITYARNTSPYY EIERYFNTHNNQATRFYSASSLSASIRLAESGIGIAILPKEVIHTSLQNN TLEIIEADWSPSPLQFSVAYIDTPVNLMTMESVKLTFEAVKQYKNVN >VF1490 cys regulon transcriptional activator MKLQQLKYIVEVVNHSLNVSSTAESLYTSQPGISKQVRLLEDELGVQIFE RSGKHLTRVTPSGEEIVKISREILSRVESIKSVAGEHTHPEKGTLNITTT HTQARYALPDVIKGFKNRYPAVSLHMHQGTPSQMSDAIAKGTADFAIATE ALHLYQDAIMLPCYHWNRSIVVTKDHPLAQLQQVTIEDLAAFELVTYVFG FTGRSALDSAFNKAGLKPKIVFTATDADVIKTYVRLGIGVGVIASMAMDE ERDSDLVAIDASHIFDASTTTIGFKRGSFLKSYMFDFMERFAPHLTRPIV EQATMLKNNHEIEEMFKDINLPVR >VFA0313 stress-responsive transcriptional regulator PspC MSRELYRDTRNGKIGGVCAGIAQYFGVEPWIVRILVVSAALFSAGFLVML AYFAGMLFLDKAPIEMYYRAEESREHTVKSKPWQAGQSASEVIKRVDRDM ARMEEKIRRMEGYVTSSEYKVRKEFRNL >VFA0383 exoribonuclease II MFQDNPLLAQLKQQIQEKLPKKEGTIKATERGFGFLESDDKKKSIFIPPA QMKKVMHGDKVVALIRTENEKEQAEPDQLIEQSITRFIGRIQMFKKRLQV MPDHPSLKNAIKAKTRKGVNPETLKEGDWVVAELTQHPLKGDQGFQCDIT HKITDSDDKIAPWWVTLAQNDLPNSEPEGIEHWEIKDDADLVRVDMTATP FVTIDGESTKDMDDALYIKKLENGSFELTIAIADPTAYITPDDSMDKVAR ERGYTIYLPGRNIPMLPRDLSDELCSLIEGQERPALCCTVLVDANGNIQE DSINFFAATIKSHARLAYDHVSDFLETGSCDKWQPNDTIAQVVTELYEFA QVRTTWRETHAVIFPDRPDYRFELSEDNDVIAIHADMRRTANKLVEEAMV TANICAGKTLRAAFNMGVFNSHAGIKSDKLKDVVEIVNQLEGVDFTEEQI ATLEGFSELRRLLGKQPTSYLDARIRKFQTYSETGNEPLPHYAMGLDIYA TWTSPIRKYSDMINHRMLKAHILGKEPVQRPDDIVGEELAISRRFHRMAE RNVSDWLYCRTLASEVEKETKYTAEIFDINRAGMRVRLIENGAAAFIPGS LIVDNKERIECNADQGIISIDKHETFKLGDQLHVVLAEVKEDTRNMVAKP LQAFPAPEPEEAPVVENEDATTNATTSADA >VF1439 putative ATP-dependent RNA helicase RhlE MTTTTAPANFTELGLISPLLARLTELEYQQPTPIQAQAIPSVLAGRDLIA GANTGSGKTATFALPLLQQIAELQSGKAQASKGNFVTGLVLVPTRELAKQ VADSIKSYAVHFNGAIKTVSVFGGVSVNTQMLALRGGADILVATPGRLLD LISSNAVKLDKVKTLVLDEADRMLSLGFTEELNELLALAPKQKQTLLFSA TFPEEVQTLTQALLNNPVEIQLQSADASTVVQRVFTVNKGEKTSVLAHLI QKNQWRQALIFVNAKNACNHLADKLAKRGIAAEVFHGDKGQGARTRVLEA FKAGEIDVLIATDIAARGLDIEKLPVVINFDLPRSPADYMHRIGRSGRAG EVGLALSLIDYEDYHHFKIIEKKNKIRLEREQVEGFEVNEEITEALLASI KPVAKPEGTGKKNKKKYKDNW >VFA0871 hypothetical protein MIIDDFVWLPKSDLLIGKLEKLGWKTLFSVKTNDNNIYYCLSSTVYFLDD KIKQCLLSSICVVNNEYKDCLVLFDEFHDVGFLWKDKKCINLKEQTLLDI VGSDLDFSLKKNIIRISSINDIVDEADIKIRKYYGFYPLLISISFLILFL LVGAWLWLF >VFA0041 two component response regulator UhpA MINVALVDDHIIVRSGFAQLLSLESDISVVGEFSSAAEARRGLPSCHPDV VILDISMQDESGLSLLEDIPSGIASIMLSVHDSPAMVEKSLELGAKGYLS KRCSPDELIQAVRTSANGGCYLTPDIAIKLATPVKNKTALNHLTRRENEV CQLLATGLDVKSIAIELGLSHKTVHVHRANAMDKLNVKNNVELAKLFTQD SY >VF0526 transcriptional regulator MQIALVEDNEILNHHLSSQLKDQGHVVYSDKTASAFLQTVQKKEHIDVMI VDLGLPDFDGITLIKQIRRKEIHSPILILTARGNWQDKVEGLEAGADDYL VKPFQSEELIARLYALARRAAGFTQSKVTAENIELDIKAKTIHVDGQFLQ LTSFEYDIAAYLIKNSLKIISKQQFVDALYQEDSEVQLNNIEVIISRLRK KFAAVGHNELITTVRGQGYQFQIKAK >VF1722 transcriptional activator protein MetR MIELKHLKTLTTLRDTGSLTATANALHLTQSALSHQLKDFETRLGSSVFL RKTRPVKFTSEGEILLKLADDLLPKLAKAEYEIASLKEDLHGRLHMAIEC HSCFQWLMPAIKEYQISWPEVELDFSSGFGFEPLPALVNGDLDLVITSDI QPRSEVHYEPLFDFEMRLIMATNHPLANKDSIEPKDLLDQTMLTYPVQKQ RLDVVKHFLSPNHVEPAKWKQAENTLMLVQMVSAGLGVAALPNWAISEFS RQGLIESKPLGKGLWRRLFAAVRDSEHDKKYLQAFFSTAKQQSQSHLVGI KMT >VFA0049 hypothetical protein MMDEKYIDALKALSEPNRLRLFWLFLHVDECIAVAEALDIIGDTQYNVSR NLKMLYRAGLLNHQKKGKWVFYTLKEQAAPHCKALVDSVRFLPKDEFEEV TRRCVLRLSLRVNGECILGADTETWQKKLNE >VFA0311 phage shock protein A MGIFSRFADIVNSNVTSLLDKAENPEKMIRLIIQEMEDTLVEVRTASAKA LADKKELTRKISSIEAQVADWQDKASLALLKQREDLARSALIEKQKVQDI LSSLKTEFILVEESIEKLSAELIELETKLTETRARQQALVIRQQTAQHRN DIKSHTHSGKTERAMAKFEQYERRIDELDAKADSYSIGKANSLEQEFAEL QAQDEIDKEIERLKEQMKKDA >VF0877 transcriptional regulators, LysR family MMDLNNITLLNQVVDSGSFTQAATNLGMTKSTVSRKLAELEEHLGVKLIT RSTRKLGLTQEGEIFYQASVKVLDIMQQTELELTANQNLIRGHLNLAMPV EIGHNVMSDYINSFLKHYPEVSINLEMTNREVDIIGDNIDLYVQIGEIND SSLVARTIDFSERIIVASPEYLNNYGYIQTPEDLQAPHHQIRVVNAVKVP NLYFNQVDKAIRVNLPYRLKVNTVTACKSACLSGLGIASLPEFICREHIN NGELIRILPDWDLPRVAISLVFPQNKLLPKRLRAFIDHVLERFESKNAAR K >VFA0359 transcriptional regulator, TetR family MQKKLTRSQQKHLDIINAAKEEFIEFGFLAANMDRITSSAEVSKRTLYRH FESKEVLFESVLTIINDSVNESISYHFDPNKSTEEQLTEIAYKEIDVLYK TYGIALARTIVMEFLRQPEMAKTLIQNIYSIRAITQWFRSAIEAKRLKDA DPKLMTDVYVSLFQGLFFWPQVMHLDLEPHGEELSQKIETLTTIFLQSYG VAE >VFA1113 transcriptional regulator, AsnC family MDRFDERILQELKLNGRLTNVELSERIGLSPSATLRRVQELERNGTIQGY RAILNPSKCGIGFVAYVTIGLSDHSKKSQKDFEEQIMESKEVTECHNITG SNEYLLRVETESLSSYKQFHSNVLGEISQVNSIGTLVVMDTPKDERT >VF0664 transcriptional regulator, RpiR family MSNHNIQIKAGNIIDTIGSLYNSLTPSSKRIADYVMSNATQVSKHSIAEL SQIVNAGDATIIRFCRTLGFKGYQDFKMELAIEVSNLQGREKEIFDTDVT AEDNAEVIGHKLQSTIESVLAETMNLLNFQSLESVAEALKDAKAIYFFGV GSSGLTAESAKHKFMRIGLNVDAFTNNHFMYIKSSLMQPGDFAVGLSHSG NSVETTKALRLAKESGATTIAITHNPRSDITKYSDYVLVNGNRQGQLQGD SIGTKISQLFVLDLIYTLLVKRDISGAKANKLKTTEALSNQS >VF1111 transcriptional regulators, LysR family MEEKLGVRLLEKRGRELVPTETGKHYYQLLESQFSDLESNCHQLNEHVDE VTGMIRLSLPYRFYHHYVRDLIVDFLLEYPKAQIEVNLCAEDTLPATDRD LVLTFDISRADGMIARPLFLAKHGVFVTKSYWEHNQTKNIEELDWIRLND QKNLTYTDEKQTLKEIHVRPRLEVNDLDQVLHATVKGLGAARLPVHLVTS DMDLVEIFPDYSFPPRQSYLVYKQRKYQPRALTILVERIISVMER >VFA0460 transcription-repair coupling factor MPIKNLLSLSLPTKANDTRSVGNLTGSSLALAIAEIEQQHQGPIIVAVTE PQLAFRLQNEINQFSQNAVDVFPDWETLPYDSFSPHQDIISDRLSRLYHL PQQKNGTLIVPVSTLLQRQSPQSFLHKHALVVNVGDRLSFDKLKLQLEKS GYLHVDQVMSHGEYASRGSIIDLFPMGNGHPFRIDFFDDEIDSIRQFDPE NQRTIEEVKSINLLPAHEFPTDDEAIEDFRIRWRQRFDARREPESVYQQI SKGAWPAGVEYWQPLFFDETETLFDYLPDNTLLVTIGDIEKAADDFLADA EYRYDQRRVDPLRPLLPVNELWLNTADMFALFKQYPRVKLSKEPEKEKAG RFNPDLLELPEIAIQHQNKEPFAQFRQFYEKFSGQVIFSVESEGRREALL ELLARIKLKPAICETMKEAMSHKNKATLVIGSAERGFILQDPCVAFICES DLLGERVIQRRRRGDKQSASSDTIIRNLAELKIGQPVVHLDHGIGRYMGL QTLDVGDMPAEYMMLEYQDQAKLYVPVSSLNLISRYSAGADETAPIHKLG GEAWTKARRKAAEKVRDVAAELLDVYANALLSPVLPSNRIVKLMLILKRA SHLKRRTIKTLRLMPYYRICAKLKPWIALCVVM >VF0608 transcriptional regulator, LacI family MATINDVCKLAGVSKATVSRVMNGKGPVKEETKKLIFDAMETLDYKPSLV AQALATNSSNSIGLIVSFFDGYYFGILLKEATRIAEESGKQLIVTDGHNQ VETEIEAINSLVARKCDAILIYSRTMTADDYCEIQKKLPIPLVVINRTLP DGLGHAVAFDQYNASQMAIEHLVGLGHKNIAIITLNMTSSTGQIRLKGAK ETLEKHGIAYDDNLTIIKNGKLEDGYQACKELLKRSQDISAIFCFNDHLA LGAIKALKEMNIRVPEDISIVGIDNDEISAFLSPALTTINIPIQKVTQLA MDKALRLISDKEVKATTEILKGNIIVRESTKNIN >VFA1121 transcriptional regulator, MarR family MEEFDRQSSFGWMINVIANQASKRFETELKQHGLTVALWPTMMCLWEEEG VTQRDIAEKSKVENSTTTRTLDKLEKLGLVERQADPNSRRSFRIYLTDEG RALKETLLPIPIKVNKEILSSLDLNEQKEMIRLLQKMVAAV >VF2561 cold shock protein MSKSTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIATEGFKTLKEGQAV TFTVEQGQKGPQAADVTPA >VF1148 two-component response regulator MLKAIVIDDELFAREELIEQLNEIGHIDIIAECGNAIDGLKQINILKPDV VFLDIQMPRITGMELISMLDPETMPNIVFVTAYDEFAVKAFEDNAFDYLL KPIEPARLQKTIKRLIQADKKQDLTPLSQPDIDLIPCSGHNRILLLPSNE IEVASIQASGVELLSKTEKACTQLTLKVLEEKTPLIRCHRQFLINPHFIR EIKLHENGTSEIVTQNGHIAQVSRRYLKEIKERLGIHH >VFA1094 cold shock protein MSKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKV SFEVEQGQKGPQAANVVAL >VF1009 ATP-dependent helicase, DinG family MLNKSVTDSIRQSYKTLQDQLPGFIPRRAQNYLVAEIAKSLAGEYSDSNR MIVAEAGTGIGKSLAYLLSAIPYAKLNNKKVVISTATVALQEQLAHKDLP FYRRISPLPFSFIIAKGRQRYCCSHKLSLLTESNNEDDKQVALFTEKPKK KELDLLKRMYKALAEGKWDGDIDSWPTTIPSSIWQSIVSDKYSCHNGLPM HRECPFQKAREHLDKADVVIANHSLVMADIDLGGGVVLSEPEQTIYIFDE AHHLPNVAREHSSAAASLKGSASWLESLNKSVSKFCNLADQKRVNRFQNS LHEHIQELIPTLNQLSKQFDPTLFNDDGVYRFEHGEIPNWLAEQSKELKE VSTKANQALAKISDLISERMKDGELAPRMAEPALAEIGFYLQRLENLAQV WFLMAKPNSDKGAPLARWLEKSQDRDGDTFINVSPLEVGWQLDQNLWSRA AGAVVVSATMRALNSYSFFCKQAGISEKPEDGVRFLSLASPFNYQENAQL VIPKLPMEPSAAGFTDLLIEELPFYLAEQSSSLVLFSSYWQMNKVAEGIE KIVKKHGWNLLIQGQESRQEILKKHKKLCEENKISILFGTGSFSEGLDLP GNLLTNLIITKIPFGVPTSPVEEAHSEYIESRGGNPFMQISVPEASKKLI QSVGRLLRKEEDSGRVVLLDRRVITKRYGKALLDALPPFKRLIE >VF2120 aerobic respiration control protein ArcA MQTPQILIVEDEHVTRNTLKSIFEAEGYNVFEASDGEEMHKVLSEQQLNL VIMDINLPGKNGLLLARELRERGDMALMFLTGRDNEVDKILGLEIGADDY ITKPFNPRELTIRARNLLTRSMNQNTVVEDKKMVERYVFNGWTVEINSRS LVSPSGESYKLPRSEFRALLHFCENPGKIQTRADLLKKMTGRELKPHDRT VDVTIRRIRKHFESVTDTPEIIATIHGEGYRFCGDLEEL >VFA0105 transcriptional regulator MLQFDYNLLNTLEVLLEEQSVTSAASRLHLSQSAVSKQLAKLREVFDDPL FERTPYGLRATPRAKQLAPELRQVLQQLELFTRPNNFEPEKSNRTFDIHM VEPAYSLTYPHFMPALLKQAPQINVHAKTWRRDSLDQLLRCEIDLAISCW EWDTRSKWHVNNIPSELNYIELARDHSVCLVREGHPLFDEEWGLDTFLKY RHLQVVFGGIEQWLLDDILNLQHLKRDIAVNLTDFHSAMELCENSDLILC APSKYIDNMLKGSPLKKLPAPISMEPGCYVLMWHKHFEFDHSHRWFRELI IDKVSKEYLVK >VF2374 two-component response regulator MDDNYTIIIADDHPLFRNALFQSIHMAISGANLLEADSLEALLKVLEKEP EPDLLLLDLKMPGSNGMSGLIQLRSQYPDLPIVVVSASEEASIVSQVKTH GAFGFIPKSSDMKSLIGALNQILAGDSYFPAGAIKNSAACDDLATKIAAL TPQQYKVLGMLSDGLLNKQIAYDLDVSEATIKAHMTAIFRKLGVKNRTQA VILLQQTES >VF2361 transcriptional regulator, ArsR family MLPHQFFKMLSDETRMRCLLLIAREGRLCVNQLTEALDESQPKISRHLAQ LRQSGVLVDTREGQWVYYQVSSNLPGWLNKIIEGLKQSNCLQAQYQKDTD KLNAMKACC >VF2442 LexA repressor MKPLTARQQEVFDLIKAKIDDTGMPPTRAEIARELGFRSANAAEEHLKAL ARKQVIEIIPGASRGIRILLQDADHHDEELGVPLIGQVAAGEPILAQEHV ESHYKVDPGMFKPQADFLLRVNGESMKDIGIMDGDLLAVHKTQDVRDGQV VVARVDDDVTVKRLERKGSMVFLHAENEEFSPIEVDLTSQSLSIEGLAVG VIRSTTWM >VFA0653 IAA acetyltransferase MIEFKKISSDLAPMKLLLEADPSQECINKYLNGSDCFGAFKNHEIVGICI SKQLSSSVAEIYNIAIAPEYQQKGIGSNLLKFVLNELALNGYSNVELGTG TFGYQLSFYQRHGFRVDSIVKDFFLDNYDEDIYENGIQHKDMLRLVCRLL >VFA0258 transcriptional regulator, MerR family MRQSKSIIRQSHFLGTKIRNLRKRNHLTMEDLSTRCIRVDPENSPSVSYL SMIERGKRVPSADMLEVIATVFQKESSWFLDNEPEPQAITPDKGRKGGIS GMVLEPSFLFSNDILQIAIPEMLNQTGVTGRQFAHLLIRAHQENNQNHFP DLERAAEEVGLKQLPLSVEQMMDMALKHGLVLKWVKETPKAVIDEFGVNG KELLTSFFEPPSTVYLNEMLKQHSTRLKYDLAVYIGHCVLHNKEGLKSSL SVGSHRVFDEEVHHTDSALNAQDILHAWRDFESSFFAGALLCPKVPFRQL LDRYGYEVEAHRLAGVSPSVAMRRMTVVSPYPHWHYFDAYAPGKLKAVYR GNGIPLPWGNMKQVSDPCQHWAVFRRLTEPKEGSSAQISILNVGSEPRIY CCESINMTDPAGNNRVLCAGVDLNPAIEAQGKDAVALARDLQKACVKNGG ESSISKSIKRELISVAKILNINWIERGVESDAKVICSRGAVCPRKPTCYK >VF1113 transcriptional regulator, RpiR family MNILEKIQNQRSNLSSNGIKILDFILDDPASISSYSSQALAAKVGVSQSS IVKLTQRLGFKGFTAFKLAIIEDLGRKQAILEPERPIHNKINSDDSSLTI AQKLVQEKTHALIATTNAINFSEFELVTTLLNQAQRIQIVGIGGSALTAK DLAFKLLKIGMTALTEQDSHVQIATANTLTKQDVQIVISYSGSRKEILMA AQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFRSSSISSRTAQ NVITDLLFMTLLQIKSDKAKLLIDEISSTMNRI >VF1573 DNA transformation protein TfoX MDKPVLKDSLRLLSSLGKITSRSMFGGFGIFIDDTMFALVVQDKLHLRAS DETINLFKEQGFEPYVYKKRGFPVVTKYFAISPECWDEPDSILIQAVVAL DVAKKDKEKQKSAGPSRIKDLPNLRLATERMLKKAGITTVEELKNTGSVN AYKAIQQTHSSSVSDELLWSLEGAIKGMHWSVISAETRNELRKQL >VF1066 transcriptional regulators, LysR family MGQLESMRIFITVVETGSITKAAERLNLAKSAISKRLSELEHQLGVKLLN RTTRTSSLTEAGQVYLNKCKLILDEVDDLHCHISSTSSKLNGVLKLAVPL TFGLKHLVPALDNFAKLHPELKLDIDFSDKKIDLVEDGVDLAIRIGSLSN STLRAKPLAPIHHVLCVSPDYLTEHGHITTPNDLKSHKLLRYSQQPLSGV ELIDNNNKTMTVPMESFCIANNGDFLKTMAVSGHGVLFTPKFIVWEELAN GSLIPIMTDYRFNSIKAYAVYPETRYLPRKVRMLIDFLSEYFGNEPYWDK >VFA0730 transcriptional regulators, LysR family MDKSSRYFYEVARQGSIKGASEKLFISQPTLTTAIKKLEENLDVILFHRK SKGVELTSSGWLYYRYVQDLFEKHSQMMHQLTDMKARSQGKIKLGIGEAW WECFASEVIKQFVEQHPNNSMYIEFGNGLSMLNQLLNGDIDLFIGHEIEN IDPRHRVLFMPLFIEQEAWFVREGHPLLSNDLTSNELDNYPLIKVTPDHI RHTKILNDEGMEAFNLKQQKTGVVYELNSLKASIDMLKTSDAIMPYTDQV KEKMAELGIVTLPQGSEKSGSVGIYTKTEQVSESIQYLVSLLKGK >VF1979 transcriptional regulators, LysR family MAKDLFATLDLNLLRTFLILSQELNMRKASERLFVSQPAISQALQKLRNH FNDELFIKVRHGLKPTPFAEELAENIQPYLDGLSSVLNASQEFQPENLNK TLKIALAPQVLTCLSGALFHEVREKAPNVDLQLVNWSESTFDDLSKGKLD IAISYEYDKFPKELLSKSLITITGCVIVRKDHPIEKMIATPYDFEGYELA SLIIPGWNDNKSLASELLTKMNIEHKIGFRSELPMALVDVVQHTDMYFPS TSLFPIHQYSGLRRIDLSLDDVPLNYPIYSYFHQRHKKNALHAWVNQLIT NLLSEANIK >VF1144 putative ATP-dependent RNA helicase RhlE MSFSSQGFAPEIVKALTECGYQKLTPIQQKAIPLARKGHDILANAQTGTG KTAAFALPVIQQLLDSKKSATRRTARALILAPTRELAEQIAVNIADYIKY TSLTVTSVFGGKKMSSQERALEPGVDILVATPGRLQEHIEEENVSIANLE FLVFDEADRMLDMGFVNAIRNIMMEVNTSPQIMLFSATSSAQMNKLASDI LRKPKRISVDPENTTASTIAHVVYPVDEERKTELLSELIGRKNWQQVLVF VNYKETANEIVKELKLDGIKAVLCHGDKAQSARRRALEEFKEGKARVMVA TDVAARGLDIADLPHVINYDMPFLAEDYVHRIGRTGRAGKKGHAVSFVSR EEELTVVQVETLIQQRIRRVEQPGYEPKNRDAYIDKVNTKSAFKNRKGRT NNPNEDQSSAERRMRLKNVIQNKARITKLKK >VFA1024 transcriptional regulator MNSTLLFSDTKPTSLESVRVLRQSLSKILKNLEINTTVLNQCLLCFSEWS TNLVLHPIQPSKNISLTLRKSNSHWQIDIIDDGIPWDPTEQHKESELSEF SLKCGGRGIDIIQDQTDDIRYKSTIENNTLSLLWERSPSHKHPHILIVED DAIQSKLLQAYLKSNFSITATTNGREALQFLQHNTVDLIISDIQMPEMSG LELRSQLEKENNFSIPFIFLSNLQDTNTVNCAAELGIDDFLQKPVQKTQL IHSITRVLGRFHQVYHALSEQLNQKIAHTLLPQVEAHSDKWKLITQQRTV GQGGGDFTLSRANNNNTLLLLADVMGHDESAKFFAYAYAGYVRGLMQHAD LTQPSQLLSQLSNNAFKDQLLSQTMLTTCCLSFIGDDTIKISSAGHPKPL HITPRGINIIEIEGTLPGLLPTTHYKETTISMKYGERLALFTDGLFESGD TISERDTLEKAIKKQLIETLHLPIEQAINQIIKTFDALAGTPPNDDALLL LIENQ >VF1353 virulence gene repressor RsaL MSNRDLFTELSSALVEAKEHSEGKVTLKTHQVNDISELDISPDEIVSIRE QFNMSRGVFARLLHTSSRTLENWEQGRSAPNGQAVTLLKLVQRHPETLSH IAEL >VF0896 DNA transformation protein TfoX MTGTGDVNLKIKEIEMSHLEERFFNFVKKLGRFNKRSMFGGVGLFNEDAM FSLVTDGRLYVRGGGEVDARFEELGCERFKHVKKTTIATVNYFDVTELFE KKPASLLSIVQEAMENSRLEREFKKSKENRRLRDLPNMQLTLERMVKKAG VPDVDSFLEIGAVDVFKKVNHTYGGDVDVKLLWKFAGAESGVHWTLLQEP AKQALLQQV >VFA1046 transcriptional regulator, LysR family MITLDTDLLKTFLEVTKTRHFGRAAEHLFLTQSAVSFRVRQLESQLGNPL FTRQRHNVQLTAAGERLLPYAEAILQTWGRAKQDVALTEDYNSQITIGAS ALIWEFDGISDWINGIYDTISGLALRLESIPRQELAKALLEKSVDLFITS EPPKIDGIRVFKIRDYQLQLVSSTPNSTMETIQSMPLVYLDWGARFAIQH SKIAELQKTPILHTHSSKMALDYLMSHSSIGYLPAPVINQSVDNKELYVV EGAPIMEQELYLVWQEKSEKAELIDQITNIKPKMVTSSV >VFA0063 transcriptional regulator MSQHVELLETVEECDDATSFLCASNKLINLKLKALLPNIFVQDELVMEYA VEPLLKEDGPLVTTDVVSKLMFAMGKISLETYADIGLYAQVLEYAQSQPN KLSFGDDMIYDFISNQAVLSTQQDSFYLESINQLKFSSFEVFSQMRYESL IKTVLKLSCEMLLEKIEEEITQ >VFA0732 transcriptional regulator MSQSITAVIADDEPLLRFHLEKMLSDLWFDLDIVAVCANGKEALDAIEQH QPDIAFLDIKMPELDGMALAAKLQKGTVAPLIVFITAYDEFAVKAFETNA IDYVLKPISETRLEATCEKLKQRVTQQNKHSAPKQNQDVLSDLFAQIQQL SAQQQPEYLCWIKAYKGEDLHLISVSDVLYFKAEDKYVSVYAKQNDIDIT EYLIRSSLKELQQKINPDHFWQIHRSSIVNVAQIEKVKKDLLGHLYVHIG GVKLPVSRSAQSLFKGM >VF0262 DNA-directed RNA polymerase alpha chain MQGSVTEFLKPRLVDIEQVSTTHAKVTLEPLERGFGHTLGNALRRILLSS MPGCAVTEVEIEGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVII TLNKSGAGPVVAGDITHDGDVEIANPEHVICHLTDDNAEISMRIKVERGR GYVPSTARIHTEEDERPIGRLLVDATYSPVDKISYAVEAARVEQRTDLDK LVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRVPEEKEEKPEFD PILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIAED >VF1510 transcriptional regulator MFEFKWLEDFMSLIELGNFSAAAKSRYVTQSAFSRRIQALELWVGVPLFD RSSYPIGLTEHGNKFVPYAENLLNQIKVTKEDFSLASLKTDNTVRIVCLH SFAINLLPNLLAQFNNQLSHLNISINPSVQGIDNHFQTLLDDSSDLLFTY NMIGMRPSISLENKLEKHILFKEKIIPVISPDLLKNHEDNTPWPLLSYSE HTFLYKVVNQLTKSISVPFSQVFETTLSESLIEMAINGIGVAWVPMHAVE KELIKGTLVTAFTEYSDWTIQLDVVCYHSKANSRPAVLQFLEEIHSLKN >VF2051 transcriptional regulators, LysR family MFKLMLQFIQVAKAQNVTQAANTLCLSQPTLSHNMQKLEEKLGSKLFYRN SKGITLTSSGEVLYEQAKMMQHLYENTLHKLEKNKLRHQTELKIGCGDAW WHLFVRDCVQDFRDTNPHSNITIDVGDHLQLMNLLLSDEISIFVGHEILG LAQYEDILFHPLFSSHEEVYVRKDHPLLERVCSDEDIARFPSVDLGASKK RYAHLVQQQNNELSTFQKRHYLQEKVIYNTNSLLTALDLLQNSDAILPYP VGMKVYFEGFGIVPLKMKKCFGKATIGAYLHKDGQQNKQSIALLEQFKEL IKNNPQIKGKE >VFA0525 transcriptional regulator, AraC family MFKAFTYEGNNVQKLKNVVITNPCIIWIVCGVKNISVDGYKYTLKKDEAI FLSGNSKISFENFTEDGFFISKQITFIRKPNIESVRKNKFELSKYRSVKL DSQLKMTMEFLHQADSILNNIKTRSMWLDGLYLLLLDYDYLEMLFRPDEI SFNEKVYEILDKMDPKEHRIESICLVLNISKATLIRRLKKSGTQFKKIVR QVRMNKALFLIQKRTIPLDEISFSCGYQSMELFNLYFESEFGISPKNYIK TFSGI >VFA0793 transcriptional regulators, LysR family MLDRIDNVWLQSFFSVYEKHSFAKASEHLAIPSSNVSRHIQQLESILGEK LFYRTTRKVTPTLMGERLFQEIREPLYNLNQSLQRLSEAPTSLKGSIRLS SPDIPIIGEVLADFLTTYTDIKLYCEHSTAIENAILNDPDIIISFERGAL DDRDWVSKPLCQWETAILASKECINRYGLPENLTELESMPCISSYKSFGG TPWIFTMPESNEFKTLSPKSRIKVDGGFTAKAFAQRGLGFVALPTSFCSD EIAQGELQQVSVDYDLSPLTIFIHYRAINFHSHLSKLLVNFITTKMSYSS >VFA1086 transcriptional regulators, LysR family MLNPLWLNTFCTLVNVGHFTQTAEKLFMTQPGVSQHIKKLEQACGYDLLK REGKSVELTEQGRLVYEYANKQKQNEAQLIEALSFDDPHKGLCKLSCSGA LALSLYPECINLQKAYPSLTTSLEAAPNHKILDDIQRGSIDIGIVTHNPT PSLFSSEKLTEEPLCLVLPKHYQNTDITIETLMQCGLIKHPDAEHYLSLY FDNCKDHELESGNVNEFPVASYINQLSQILLPVAQGIGFTVLPQSAIDAF PDKQELYIHEPTQLVMERLFLVHKRNRDLPKRYQTLIERIKQVLLS >VF1269 DNA polymerase V subunit MNVIPLHASAGISGFESPAAEYSQLSFDLDELLIEHPSSTFIGRASGDSM QGVGIFDGDLLIVDRYVTVQSNDVIVANFNGEFVCKILDTQRRLLVSANE RYQTVPINDYDTFTIEGVVTRSIRCHRPSYLLSQS >VF1720 maltose regulon regulatory protein MalI MINKKANIKDVAERAGVSVTTVSMVLSEKGRISSDTIDKVNQAVQDLGYI KNRTASNLRSQKSTLIGLILRDISDPYYAEVAAGISEVLEEKGYMLFLAQ SGTSQEKFDQCLATMIAQDIGGIIFCPIRDSELPNLDKVKNVGLPIVCVA RAKINQPIDFVGPDNMQAAKIATEYLIKQGHRQIAYVGGQSDSLSRAERL GGYCSTLMQFGLPFKSEWVVECDKSQTASAEAVSQLINKNPKITAILCHY SSTAFGAVYGVNRANRSVGKDNYIGQQVAIIGFDDVPEAELIQPSLTFVS SPIRDIGRQAGHRLINQINDKGSVPQSLILSPELIARNSA >VF2421 transcription antitermination protein NusG MSEAPKKRWYVVQAFSGFEGRVSQSLREHIKMHNMEELFGEVLVPTEEVV EMRAGQRRKSERKFFPGYVLVQMIMNDESWHLGT >VF0124 Ttk protein MATPRKPNRRDEILQALAEMLESNEGAARITTAKLAKQVGVSEAALYRHF PSKAKMFEGLIEFIEDLFFRVLTAFLKMKKIL >VF1787 transcriptional regulator, AraC family MKANLERVPIRIGSSWRYKKIDGVEKNCHWHFHNEYELVLFRKNNAKGMV GHFERVIEKNTLWLIPPKMPHAIELLEEKELQCESHIIWLPKEWVENMIF SCTELRRMGELFKRSSNGLCFSTSTAEKVYQLIEKLFKDSILDDLGYLIQ ILGCLCSDKETRPLQLFSKQEASDKEGKEKIDLVCQYIDDNYQNSITLLN VAEHLCTSESTIHRLFQSHFGESFSQYLKKLRLNHAANLLTHSRLPIGIV AEQVGYRNQTNFNRLFKDYKQLTPNQYRKKFSSL >VFA0054 transcriptional regulator, Cro/CI family MPIVVNLDIMLAKRKMRSNQLAQLIGITEQNLSVLKNSRAKAIKFSTLEA ICKHLECQPADILEYQAEE >VF2412 DNA-directed RNA polymerase beta' chain MKDLLKFLKAQHKTEEFDAIKIGLASPDQIRSWSFGEVKKPETINYRTFK PERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRD RMGHIELASPVAHIWFLKSLPSRIGLLMDIPLRDIERVLYFESYVVTEPG MTDLERSQLLSEEEYLDKLEEFGDEFTAKMGAEAIKDLLASMDMQAEIED MREELETTNSETKRKKVTKRLKLVEAFVQSGNNPEWMILTVLPVLPPDLR PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS GRSVITVGPYLRLHQCGLPKKMALELFKPFIYSKLEGRGLATTIKAAKKM VEREEAIVWDILDDVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH PLVCAAYNADFDGDQMAVHVPLTLEAQLEARTLMMSTNNILSPASGDPII VPSQDVVLGLYYMTREKINAKGEGMYLEGFAEAEKAYRTGVAELHARVKV RITEVLR >VF0039 virulence genes transcriptional regulator PhcA MSYILNKAPNVMLDTHAWDTNTLKKLQSGEMDIGITGKDLDPKYANITMH TPEDICSKEIYRDSQMCLVRRNHPVLKQEWTLDTYLQQRHVQVRCDGKDQ WLLDYKLADRGLERSIGIIVPDFNSAASLCTHTDLVFTAPSHFIKLIAEQ LNLVVLPLPTDLPQMAYTLFWHQQKENDAANCWLRNTIINHCKDLSISTI ADEH >VF0104 GTP pyrophosphokinase MDLFDSLKDVAKDYLPEPHIEALRRSYLVAKEAHEGQTRSSGEPYIIHPV AVARILAEMKLDHKTLMAALLHDVIEDTAVSKEELAEQFGDTVAELVDGV SKLDKLKFRDKKEAQAENFRKMVMAMVQDIRVILIKLADRTHNMRTLGAL RPDKRRRIARETLEIFSPLAHRLGIHNIKTELEELGFEALYPNRYRVLKE VVKSARGNRKEMIQKIHSEIEGRIAEAGITGRVIGREKNLFAIYNKMKNK EQRFHTIMDIYAFRVITDNVDTCYRALGQVHSIYKPRPGRIKDYIAVPKA NGYQSLHTSMVGPHGVPVEVQIRTEDMEQMANKGVAAHWSYKEGDNSSTT AQIRAQRWMQSLLELQQSAGSSFEFIENVKSDLFPNEIYVFTPKGRIFEL PVGATAVDFAYAVHSDVGNSCVGSRVNRQPYPLSKPLKNGQTVEIISAPG ARPNAAWLNYVVTSKARTKIRQVLKTMRREDSVVLGRRLLNHALGHNVSL DDISQENIDHVLSDLKLAELDDLLAAIGLGELMSIVIARRLLGSADELTE QTSNIETTTGKKLPIRGADGILLTFANCCRPIPGDHIIAHVSPGRGLVVH MEECANVRGYQKELDKYMGVEWADEFDQEFDTALDIDIQNHQGALADLAN VIAGTGSNIRGISTEEKDGRLYTVTIELTVKDRKHLAEIMRRIRVMPHAL KVRRHKN >VFA0179 transcriptional activator protein IrlR MKLLIIEDETKTGEYLKKGLTESGYTVDLSQDGADGLYNATTNQYDLIIL DVMLPKLNGWQILQTLRNCENDTPIIMLTAKDQIDDRVKGFELGANDYLI KPFAFAELKARVENALRAKSVISQPSSNELVLHDLKLDLLKRTATRNQDN ITLTAKEFSLLELFMRKQGEVLSRTTIASLIWDMNFDSDTNVIDVAVKRL RSKIDKPYDTPLIHTVRGMGYKMDEC >VF0270 superfamily II DNA/RNA helicases, SNF2 family MSFALGQRWISDTESDLGLGTVVAVDDRTVSLLFAASEENRLYAKHDAPV TRVMFNKGDTIESHEGWSLDVEDVIEEGGLLTYIGTRVDTDEANVVLRET LLSHQIRFNKPQDKLFAGQIDRMDRFALRFRALQNQYEQHKSPMRGLCGM RAGLIPHQLFIAHEVGRRYAPRVLLADEVGLGKTIEAGMIIHQQVLSGRA ERVLIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAYADSENPFDTAQ FVLCSLDFIRKSKRRFEQVVEADWDLLVVDEAHHLEWNQTKPSREYQVIE AIAEETPGVLLLTATPEQLGHESHFARLRLLDPDRFYDYDAFVEEERQYQ PVADAVTALMSGEKLSNDAKNRITELLSEQDVEPLFRIIESSAAEDEQAQ ARQELVDNLMDRHGTGRVLFRNTRAAIKGFPQRNLNLMPMPLPSQYATSM RVATMMGGRMTDEARAMKMLYPEEIFQEFEGDSATWWQFDPRVNWLLELL KENRNEKVLIIASRASTALQLEQALREREGIRGTVFHEGMSIIERDKAAA YFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD RIGQKRDIEIHVPYLQGTSQELLARWFDEGLNAFGETCPTGRAVYDKFAD AIIAILATGKSDGLESLIEESATLNKALKSQLEQGRDRLLEVHSNGGDKA KEIAEQIAATDGDTNLVNFALNLFDTIGLNQDDKGENAIVVTPAENMLVS SYPGLPYEGCTITFDRETALSREDMNLISWEHPMIQGGIDLVLTEGVGAT AVSLLKNKALPAGTLLLELVYVVDAQAPKQSGIARFLPKTPIRIMMDGKG NDLSAQVEFESFNRQLSPVNRHMASKLVNSVQKEIHGLIDKAEISMEERL ESVRTDAEKEMKAALNSELERLQALKAVNPNIRDEELTQIGNSNERTIWL YW >VFA1063 transcriptional regulator, MarR family MEKHEEVLVAIRQIIRAIDLHSKKLSKEYGLTGPQLILMRAIQEMDNVTI KELSKHTNVSQATTTTIIDRLELNGYVQRIRSESDRRKVHAHLTDKGKEL LDNAPLPLQDSFVNKFHNLEAWEQSLLLSSVQRVSAMMNAEDIDAAPVLQ LEGIAKS >VFA0310 psp operon transcriptional activator MRKDSLVGESDAFLSALDHASQLATIDRPILILGERGTGKELIAQRLHFL SRRWNEPLISLNCAALNSGTLDSELFGHDAGSFTGAKQRHQGRFERADGG SLFLDELTTAPLTVQEKLLRVIEYGEYERVGGSQTLKANVRLICATNQNP QEMVNEKKFRADLLDRLSFDVIHLPPLRYRENDVLLLAEHFAIKMCQEMN LTYFAGFSHQAKHQILDYDWPGNVRELRNCIERAVFKHNHEEAQIESIQI NPFIAPWENAPTKNSSTIINKTVTQDSKPSLPLNLKQFQLDQEKELLQQA LVETQYHQRKAAEELGITYHQFRGLLKKHQLLTTIKGYS >VFA0088 transcriptional regulator MIEKKKNRSKLKREAILAAAKKAYQDDGVQNTSMDKLASLAQVSKRTVYN HFSSKEALVMELLSDLWQNSMADIDIQFSENVSIQDQLERLLLAELNVIG AQSYLDLAKVAFGHFFYKPDELQLQVEKMAEQETALSRWLQLMMDTKKLT IEDKHKAGVQLHSLLKGSAFWPQLVGMRAVLSSEEKEQLVTETADMFLSR YLKR >VFA0556 hypothetical protein MMSPVQLHEFNTHTRRKSDRYPVERNGIFIVTSGQFHYRDRTGDDITLNA GDFLLYSSGDISKIKMTNDNNNFKAQSVVIDVALFQKFLSYSNAPAHAPC NSDTFIFTANDTSVVKLLELLKEQLANNDNNDTLEFLTLALLSEMVNKQP CLIPFIQKISVLTTSQQLIRYVEEHISADLTIDMVAPKLGMSASTLKRKL QSDQLSFAHLVKVKRINYAATQLRLTRKTITEIAYDTGFKTAAHFSTSFK SVKGITPKEFRDSLQG >VFA0436 hypothetical transcriptional regulatory protein MKILVIEDDQTTRDFVTKALEQEGFIVDSSDDGKEGLMMAISCDYQLIIL DRMLPNLDGLKILSAIRATGNNTPVLILSALDSVDQRVEGLTAGSDDYLT KPFALAELLARINIILRRNRPIESASNELKIKNLNINLRSQKVTINDNIV PLQNKEFILLRYLAENADEVVSRMRLFEAAWDYHFDPKTNVIDVHIAKLR KKLDNSGAVDLIETVRGAGYVLRTT >VF1988 phosphate regulon transcriptional regulatory protein PhoB MARRILVVEDEAPIREMLCFVLEQKGYEPIEAEDYDSALSLLCEPYPDLI LLDWMLPGGSGINLIKHLKRDEFTKKIPVVMLTARGEEEDKVRGLEVGAD DYITKPFSPKELMARLKAVIRRVSPTSIEELIDVQGLKLDPVSHRVTAND KPLDMGPTEFKMLHFFMTHQERVYSREQLLNNVWGTNVYVEDRTVDVHIR RLRKALEVEGHDRLVQTVRGAGYRFSVQAS >VF2404 transcriptional regulator MLTRLNQFQAQWGGNSDVIDHWLSTRQDLLVEYCKLAGLPPFDSSVSTLP DFASIQSFTQHLIDYISEGHFKIYNMVMEKWDATGFSPTEEMSQLYAHIT KTTDPILNFTDKYSKDDEELLLSDFDNDFSTLGEIIEARFELEDGLIEQI SSSLAHPPGA >VFA0176 transcriptional regulator, ArsR family MDIEIIAKALKELGHPTRLAIYKGVVRAGYQGIAVGGLQEKLNIPGSTLS HHVSGLVSAGLITQRREGRTLFCVAEYEKLTSVIDFLQDECCFDESSETN ADK >VF2393 transcriptional regulator, MerR family MYLIGELAKQCNVTSDTLRFYEKNGLLVPSGRSSSGYRLYNDDNLAQIRF ILKAKQLGLALDEIQELLAIRLEATKHSCAEVKAITQSKLNIIDEKIAQL TDIRLALKSINDACCGHVDEDASHCSILSALAELEEKKD >VF1677 transcriptional regulator, AraC family MKSLGELMQSYADHCGFNDLEGIKETAIPGVWFYRSSKGNQRQPFVYQSG IIVLGKGHKNIYIGNQPVHYGPDDYLVVGVPMPLECEAFPENGEPLLGLS IDVDSALLHRLVNELEEAKFQPCIQTSSDGFGLTSVKMANDMLESCKRLM AALHTDLDTKMLGEALLTEIVYRVLTGPEGHVLFNLAHHDSQYARVAKAM NKMHQSYANSLTVQNLAEEANMSVSAFHSAFRKITLESPLQYLKKVRLNK AKELIQLEGKRVNDAAHLVGYTSTSQFSREFKRHFNVTPKGCLA >VFA0857 transcriptional repressor SmtB MTVECKATNKSSFSTSEQELQLETHFASLAKALAHPARVRILKILSNLEK AGGCLNSDLVSELGLAQSTVSEHLRVLKQAGFITAESIPPKMCYRINREC ISSFDQLTRSILM >VFA0214 probable transcriptional regulator SyrB MQNKDLNLLRLLVILNEERQTILAAKRMNLSQPTISIMLKKLRDQFGDPL FIRDKNNLTPTIKCENILATLPALLTQLDKLYSDNTQWDISQLNGDLNLL ISPPLIPTLGSQLIKKLTLLAPELTVQCSHWAGDTPQRLENSPHQHFGIT YLPMETNKTLLEQEIGGDEFAFVVSNEHPLQHASIENVLLYPLAICLIPG GITGPSKAEQLIRNLKIKKKINLRTSDISLMTNLLKESNYVGVMPRTLQA LMQPHFRFLPIPHEIVPQSYQRKIALFCHQTNRNQPLTEWLIKEAKEILN SI >VFA0271 transcriptional regulators, LysR family MRRVKQTITEYLAKEELPKRTMGSEHTSMLGMMACVSQSDFVGVNSVRLV SQYKEQFKLQMLPLPFSTRTTSIHMIWSIKSQSNSANQWLRELIIAAERD >VFA0645 acetyltransferase MKFSTRSAKDSDFEFLFELKKAAEFEPIKAVFGWDDKIQREMHQDEWDEE KPTIIEMSGEAIGSYLLQNKGEHFYFCRFFLLPSFHGKGIGSQVLSQCLE FADSENKPVKLCYLQGNRVGGLYRKFGFQVTSEDAQFVHMNRVRMCL >VF2155 carbohydrate diacid regulator MQLTTMIAKQIVERSMKIIKHSVNVMDEYGVIIGSGDPSRLNCRHEGAIL AINENREVEIDYSTAQQLRGVKAGINLPIVFQNKVIGVVGISGKPSEIQQ YGELVKMTAELIIEQAALMTEIQWSKRHKEELVLQLIQPSDLNTQQLYSI AERLELDLNQPRIATIIKVDSFNGENLSLSHLQKLVHLLEYPERDNLVAI SSVTLNEVVVLKPITLTDTGWNRSHEEKRIRQLFQRISHDEKFTIKIALG DYFPNLEGLAQSYMTAKATMSTANAKNRILFFQDNKLPVLINGIKSDTWR MEQLKQPIVNLQKSDPKGILLKTLKAFFNHNCDSAQTCKSLHIHRNTLRY RLDKINKETSLDINKINDSTYLYLASLMSNK >VF0021 transcriptional regulators, LysR family MELEEVYRRDLNLLIALKVLLEENSVSQAAVRLNLSQSAMSRVLGRLRDL LGDPLFTRQGQHLVPTQKALEINEQINLPLESLRQLLTPSDFTPMHCDQH FLIATTDYAMQTILPYALPKIYEQAPNISLEFAPLNHENLFKQLSTEKVD MAICRPIGSVLPLKQEVLGQVGVLCLLSKNHPLSGSILTLDDYLSLPHAM IAISDGVKALIDAALSGQRERRQVLRAYHLEAALAIVDKMPLVITVPADL AYLVAERYDLVIKPLPFEFTPFDYSLIWHSRCDTSPAQTWLRRVVKEECG KLIEKRIEDIGFA >VFA1061 transcriptional regulators, LysR family MKNFDLNLLRTLNVLLETRSTTIAATRLHTSQPAISRSLRKLRDIFQDDL LIRKNGRFQLTVKAEELTQTLPMIFNGIDELMWNAEPFEPLSASNDLTIA MNSSIAQWFAPILIQHLSQTAPNISLTIVDWTESSPDDIADGTVQYGINY FPMDLPKHLIQRKGGTDSFVLACQKEHQHIGKVMKAIDFEQYPIAIHVIQ NWNDKKDHLSRILTPMDIKPSIKLRSSHLNIILQAIVQSDMLLPCSKYLA QSLDERFSYIEFDQSLTTPEGNFGFVYAVKWRNDPFLQWLNASISNLVNT KLIQ >VF0056 ATP-dependent RNA helicase RhlB MKKTHITEQNFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIA GQAQTGTGKTLAFLTATFNHL >VF0123 Ttk protein MTGHALMFENERLRSRINQIFERIELQFKQILRERKLREGKAFPIDESIL AAQLVGQVEGSFCRFVRSDFKYQPTENFNEYWALLSAQIQ >VFA1066 transcriptional regulator, LysR family MKLHHLNGLRAFEASARHLSFSLAAKELNVTPAAIGQQVKLLEEWLGISL FERRTSGVSRLVLTKEALLGLPEITRGFEHLAQGLDLLKPMKNSPILTVA VSPAFAAKWLLMRIDDFQTSYSEWDLRLDTNIRTVDYLTEGIDVGIRYGK GQWEGLEASLLMTESVFPVCSPELLNKGIEGIESIAQFPLLHDISLPKES GFPSWKVWFEQNSIFDVNTEKGLKINNSASVIQAAINGQGIALGRSVLVK DDLDCGRLVQLFPDLESTTELAYYVVWKQKGIVSDKISVFKEWLHQQVE >VF2259 transcriptional regulator MSSLTLTDKVSKMIHQDILSGKLKPGQKLVVAELKERYNVGASPIREALV QLSWNKYVKLEPQKGCWVASISLSELKELFESLRTIGQVLLAKAITNGNE NWELNVLTSFHKLNKINLQDAKIEELREWENRYTDFHNSLLEGAQSPIMY QFYQDISHQITRYRHLNNNPQVISETYAQYLEEHEIMMKLTLSRDSEQAI KYLNNHYSKASDLISTYFSA >VFA0211 transcriptional regulator MKILLIEDSEHLRRSLIVGLSNLGFTVDETGDGSKGLSMAITNDYDFIIL DLMLPNVDGITLLKSIRKMGNDVKVIILSAKSQPEDRVEGLMSGADDYLV KPFSFDELHARILTVGRRGQVKNNDDDINIGLFKLDLAKKTLEFDTKFID LTKNEYKIIECLFLSKNQVMTTENISDYVVGSFDSLSKNTIESHLSSVRK KVKALGGELPVKNKRGFGYYVEKDACTQ >VF2408 regulatory protein CsgD MSIYYLSSDPTLYSSLLIDLLEKTSGRAIISLNCDELVNKGKIDDDILVI LDIKKQTDKKYKNYIDTINQNKLKVREILFNITDENIKKNIMKYPNVVGI FYEKDNMDIISYGVKKIIEGEMWLSRKIISELIFTYREKQNAILSTSISL TTRESEILRLLASGASNLDIANSLFVSENTVKTHLYNVFKKLNVKNRLQA MMWAKGYDFEGNNR >VF0871 transcriptional regulator, TetR family MSKKSQIIETATRLFAEHGFENTPVSLICEEAEVSKGAVFHHFKNKNDIL REVFIHITTIIEETDKNDVHLATQEDPLEAAIHEIFDGMSVAKYRKMYQF NFSVMVHPTTRAIVADLIEDRYQQLQTSAEEIFRAVGYSNPVVITKMFIA EIDGIAMNYLLNNDFPLMDIKQEFIKKYCQ >VF2067 RNA polymerase sigma factor RpoS MSKSNAVTKEVEEFDLDTINDAELTSIEEESERLEVSSSQKVMDATQLYL GEIGFSPLLTAEEEVYFSRLALKGDEAARARMIESNLRLVVKIARRYNHR GLALLDLVEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQT RTIRLPIHVVKELNVYLRAARELSQKLDHEPTPEEIAEKLDKPVSDVSRM LRLNERVASVDSMVAGESDKALLDILPDTKNSDPESETQKDDINTSLVGW LGQLNPKQKEVVARRFGLLGYEAATLEQVGIEIGLTRERVRQIQVEGLRR LREIMTNQGLNMETLFAVEEY >VF1578 transcriptional regulator, AsnC family MGKHELDKVDTTLLSLLQKDCTVSLQELADAVNLTTTPCWKRLKRLEEEG ILEKKVALLNPEKLGLSFNAFVLIKTSNHSQEWYNRFVDTVSDFPEVMEF YRMAGEYDYMMKVLAEDMKAFDGFYKKLVNSIDGISNVTSTFAMEPLKYT TELPL >VF2177 LitR, transcriptional regulator MDTIQKRPRTRLSPEKRKEQLLDIAIEVFSQRGIGRGGHADIAEIAQVSV ATVFNYFPTREDLVDDVLNKVENEFHQFINNSISLDLDVRSNLNTLLLNI IDSVQTGNKWIKVWFEWSTSTRDEVWPLFLSTHSNTNQVIKTMFEEGIER NEVCNDHTPENLTKMLHGICYSVFIQANRNSSSEEMEETANCFLNMLCIY K >VF0434 transcriptional regulator, AlgH MNLKNHFLVAMPSMKDPFFQRSVIYICEHDSDGTMGLRINEPVQISLKGM LDQIELDNPSPIIFPQTLSQPVLNGGPVSDDRGFVLHSNKDNYLSSIQVT DELSVTTSKDILATLGTEYQPYKYLVALGYSGWEGGQLEKELSENTWLTL EADPSVIFDTPIPDRWRKALQLLGINPANLSSEIGHA >VFA0029 transcriptional regulator, AraC family MKLFKEHVLNLPNFDWIVREFHCRVEDNEFACSWHYHSEYELVLYLDPDG AFQGSYFAGDAIGDIHHNSLFLYGPGLPHMVAGRSVKVEQSKHHTLIIWF AHHWVERLIALIPEARNLKRLLDNSAYGLSFSVEVALKVSELLKQATSLD RHQQAVKVIEIVVSLADDIEAKKLSTTPYRIKPLSDDSEFNHRIERATRY IEKHYGDAIKIADLCKRLHMSESSAYRMFEKHYGMSFSDHIKQYRIGKAC ELLASTNLPVSLVAEKTGFKNISNFNRQFKELKTMTPSDFRRRFN >VFA0361 transcriptional repressor MATIKDVAKEAGVSVATVSRVVNKSPKASKAAIKSVNAAMTKLGYRPNAN ARALVSKSTNTIGVLVADVSDPFFGSLIKAVDGVARANNKHLLIGNGYHN AEVEKEAIELLIHNRCESLIIHSKGLSDEELIQFSQEVPGLVIINRHIPQ IAHKCIYLDNQLGSRLATEHLIESGHQHLAYINSNQQIDDCIDRKHGFAQ ALEKHGLIINSSLLSEGEPTDEGGENAMNELIKNKQSFTGVVCYNDYMAA GAIAALEKAGISVPEQVSIIGFDNGLIAKYLHPKLTTIDYPISEMASQAA LLSLLLAKDEKPETEKKVYTPTLVKRNSVHTL >VF1320 SIR2 family protein MLFPYKNIVILTGAGISAESGIQTFRASDGLWENHRIEDVATPEGFLNDP DLVQDFYNKRRALLKSDNIQPNAAHKALAKLEKELDGTVTIVTQNIDNLH ERGGSTNVIHMHGELNKIRCEESNQVFECTDDIHTGDFCHCCQIPAQLRP HVVWFGEMPLEMGRIHEALNQADLFISIGTSGSVYPAAGFVHEARLHGAH TIEINLEPSAVDDEFEEKRYGKAGELVPELVSELLEI >VF0579 transcriptional regulators, LysR family MRISLKQLNVFTVIAQEKTMTKAAERLYITKPAVSLSLSELEKNLGYKVF DRVNNRLVLNSEGRQLLPLADELLERAEVIEHQFATDSQLTGSLNIGASD TIGNHIAPVLLSKFQQQYPCDIQQLFISNTAQIINRLLEFQLDIGLVEGK AHHPKLNMIEWRRDDMYLVCSPSHPLATKAQVTLDDLEHSTWLLREEGSG SREYFINHIAANLNDWHESLQLHTTEAIINCCAENMGLACLSQLAAQNAI NDGRLVKLAYNKTLARQYWLLVHKEKYQTPLLQYFMNFIQQK >VF0055 ATP-dependent RNA helicase RhlB MAPTRELAIQIFNDAESLIASTGLKAALAYGGERYEKQQQVIEQGVDILI GTTGRIIDFYKQGHIDFKMIQAVVLDEADRMFDLGFIKDIRFIFRRMPAP TERLNMLFSATLSYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEELFYPS NDHKMALLQTLIEEEWPDRAIIFANTKHKCESVWGHLAADKHRVGLLTGD VPQKKRERILEEFTQGNVDILVATDVAARGLHIPQVTHVFNFDLPNEAED YVHRIGRTGRAGASGNSISFACEEYAINLPAIEEYIEHSIPQSDYDASAL LEDLPAPLRLQRRPQQNRRNNNGQRQGGNRKHTRPRQPRNTQS >VFA0851 transcriptional regulatory protein MSRQHLSRINDVLFYIHKDISKELAVKELADVAAYSEQHFHRIFKQVVGE SIHQYIRRTRMEYAANQLMFDTKSSVLDIANTCGFSSLSSFSRAFKSTFG MAPGEWRKHDLQVSDKPYLKDDEIAAGYVSVADKPLPQPKIIEVEDRLAA YVRHEGYNRSIRNAWLILKAWANSEERDFSTQFGLHHSNPAWVELAKCRY VACIAIDKPLKYRGVVNQMVIPGGLHGVFKLSGVYGQLLPQISHVLERWL PASGFKLRSTPAYVRYHKNHFLNENEEFELDFYLPISFY >VF2373 transcriptional regulator, DeoR family MSKRNTKQRRHMILSLLTEQGEVSVEHLSDLFDISEVTIRKDLTELEKNG LLMRKYGGAVLMPSNIIQEDNCEEVSNRKLSIAVAAVELIKDHNRIIIDS GSTTAALINQLSKRNGLVVMTNSLPVANALQEIENEPTLLMTGGTWDSHS DSFQGKVAESVLRSYDFDQLFIGADGIDLERGTTTFNELVGLSRVMSEVA REVILMVESEKIGRKIPNVELPWESIDVLITNNDLSPEQQKKIESHNVKV IRA >VF2060 transcriptional activator CadC MVGICFQINDWTLVIEENKLYRQDREVSVEPRLINLLRFLAQHSGEVFCR DELIKHVWDGAFVTDQVVTQSIFELRKVLRDGRLDNTRYLVTVPKRGYKL VAETKQIRLEDTPYWKPCDTFTSTEADENQNHNVELNTEEQEKEQDETAQ LSFPAGPLTRAVTNISNQVSNEKKKQGESFSFLHRWKLLAFDFFLVGVLI AVIFSVTYQQTTTHITKAVDTDLIEFTYHASRNSNNETEYLADGISQKLM ADLASVGHYRVQLNKTAFTTGILPGKAVNVRVEEQQNKTYLDVEYRSNIS NRVLFSRQYLMTNANLEHVLRQSSQDLMRALGVQASEQDMNRLMLGLPKE HGLLEMLVRANHFINQTDQKNFEKGIDLLENIALAEPNNDYVLSELYIAY NAYSALNPELELDENTAKIEKLSQDLQARYALSDVGVLPSRIYEALAMIA IKQDNKEDARAYLNLAFKNRESAFSYILEGKLAELDGDLDQAGESYSKAF FMDTSLETYMLAENLAFYSDLETVAYFMYRAVNPSEVRLMG >VF2087 ribonuclease III MNSSLQRLEKKIGYQFKDESFLKLALTHRSANGTHNERLEFLGDSILSFV VADDLYHRFPKVDEGDMSRMRATLVRGHTLAELGREFQLGDYLYLGPGEL KSGGFRRDSILADAVEAIIGAIYLDSDTETVRGIILSWYNTRLESIEPGV SQKDPKTRLQEYLQGRRKPLPTYTVTKIKGEAHNQEFTIECIVAGLDKPV IGKGSSRRKAEQSAADIALGQLN >VFA0738 hypothetical protein MKRITAMVSLLISVMTFSTQAALTDEDISVYNQAAAGNEDLVEQAYDRFE ELIQTDGATPLTLVYLGSAETLKGRDAMMPWTAMKYVEQGLAKIGKGLNL LATENAPIEEQTIVSGLPESYLTRALAAATYSQLPDMFNHFERGYDLYLA LLSEPTFQQQPYEATAWIYGYAVQAALRAEDTAQAEEWLAVMLKQDNTHP ESLNAQSLITASN >VF0704 N utilization substance protein B MGVSVKPAARRNARQFALQAIYSWQLSKENVADIEEQFLTAEKYDEEEHH ANEPKLQTPETDVAYFRDLFSGVALNHMKLDGKMRPYLSRPLQDLDQMEL ALLRMSIYEMMNRDDVPYKVVINEAIELAKVFAAEDSHKFVNGVLDKAAP TLRKK >VFA1126 AraC family transcriptional regulator MPYTFIDNIENNYYQIIFKKHIHMAYISGKKLISIYSLNDESINSDIEKF HFDSFGKYGDIIIINGDTPIDKYIKQAEVLIKSNKKSIFIINKINSCSKE NIIKLRDFVQKLKSDDNIKFILPFTDDTVRRGMINILLSDEFFNICIPHP DYSNDIQSNKNQPENDDSLIKSILRSEEDIEKLKTYHSSLYLAISYINKN YSDDITLEEVAKASYVSPSHLSYLFRKKLNTKFKKVLFILRLNKAKEIIM NNPRMTLTNIAIQVGFYDLSHFGKVYRKYEGVNVSEIRNNIIYNLL >VFA0724 transcriptional regulators, LysR family MRWRIMATFTFDQLEAFATVVEQGSFSAAARKLKKDRSTVHQLVAFLEID WGVELFNREGKTPKLSPDATRLYKYATLLLEQRLEVQNIANNIGSDIEDS LTISYDETMPMSVLVKTEQELSNAFPYTRVNYLSQQKDLAIQSIQEGKVD LTLQLISYRSKPHEGLAGINIGSIHFGVYVSVNSELLDHEPCSLQLMQTK KQLILQSLLSAELDNVAIFSANYQVLTRNDFLISCLEASQLAWSILPIHL AEPYVKSNQIKRCDVAFFDGDISWGCGLISSQNSDKGPVFLKAAECFKKA MKESHHY >VFA0597 transcriptional regulators, LysR family MGSIMLDNLHEMVIFATVANELNFTRAAEKLGISKSHVSKQVKALETRLD CQLVQRNNRSVSITELGSQYAEYCQKLIDIAYEADALLDAHHGRISGVFK VGIAQSFGNSHIIHALAEFQAQFPEIELEVSLFDHKPKLLEDGLDCWIAI HDDLPEGMVARKIADCRFVVAASPDYIEQHGCPTRPAELVKHKCITYQSN ERRFNDWEFTRDGVHQVVNVQSNFKIDNASAILDATKAGAGIAYLASYLL ENEFDNGSLVRLLKEWQADMKLPIYAVYPRRQHLPPKVRTFIDFLSQQVG NPPHWDKKLFN >VF1429 hypothetical protein MQTNADFTFDEFSEKLWSIFHGQALITKFSFPLNDACFTFKSLKRNNVNF YLFESPDPLSLFSFHLPSTSQPKTLLLLDVDNAGMLFNGILCEEHQFALI SEKSQQPFCLQIPAHSPILVCDINTDNKQFHQLCGSLVPVGIDIKYAEEL KIAVRNANNMFPNNHSNVGATLLMHIVELLSLHPIPMRRQALMGRSRLPR RNFIPKCIDYMMEMSSTEAIKQLSKERNISEKTIRNAFKETTGFTPKEFE QISKLFAFRRALKQPDIKTVFEAAIASDVYRWSRYASRYFKIFNELPIQT L >VFA0862 nitric oxide reductase regulator NorR MKPSMEKVLLQIALDLSSNLSSDLHYQRLINSIHQVFPCDASALFILDND HCLKPVAVKGLSQAVLGRCFPPQVHPRLEAILQSKHPVRFESNSDLPDPF DGLLLVDENINIEVHDCLGCSLYVDDTLVGVLTLDALEVGAFKKIDDITI ETFAALAAATLHNKALIKTLQDSNQQQKSINQTLIQQARIQKGELIGISP QITRLKSNISTVAHSDYAVLISGETGSGKELVAHSVHAQSQRNELPMIYV NCAALPESLAESELFGHVKGAFTGANNHRAGKFELADKGTLFLDEIGELP LLIQAKLLRVIQQGEVQRVGSDKNVMVNVRIIAATNRNLEKEVEEGRFRA DLFHRLNVFPIHVPPLREREGDISVLSGYLLDKVRTQFNVPNLHIHPKTL THLESSPWLGNVRELEHTLMRAGLRAIQENANSITLAHFLGDIENTEDVK NTSHLLPNKSQPMRELVESYQKQLIEHALSESNGIWAKAAEFLQMDRGNL YRMGKKLGISN >VFA0662 acetyltransferase MKIELATSPLDADLKRISDGISAFNEKFLPNDDSFDAGFRFALFARNDEN EIIGGIQASVVWSYCVLELLWLSEETRGSGIGSKLMTELELFSKEKGLQQ IRTETLDFQAKPFYEKNGYRVYGEINDSPKGHTTYFLVKEL >VF2413 DNA-directed RNA polymerase beta chain MMELIPERLRGETATFDIEANGKVYVEAGRRITARHIRQLTKDDITHIEV PVDYIVGKVASHDYVNEDTGEIIIAANQEFSLEDLANLSQAGYKKIEVLF TNDLDHGAYISDTLRADSTVDRLSALVEIYRMMRPGEPPTKEAAEALFES LFFSEERYDLSTVGRMKFNSSIGRDNDEGAGVLDETDIIEVMRKLIDIRN GIGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVRERLSLGDLDAI MPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGG LTRERAGFEVRDVHATHYGRLCPIETPEGPNIGLINSLSAFAQCNEYGFL ETPYRRVVDGQVTDQVDYLSAIEEGTFVIAQANAVLTEEGTFADELIIAR QKGESGLHPREHIQYMDVATNQVVSVAASLIPFLEHDDANRALMGANMQR QAVPTLKADKPLVGTGIERNVAVDSGVTAVAKRGGVVQSVDASRIVIKVN EDELVPGEAGIDIYNLTKYTRSNQNTCINQRPTVLPGEPVTRGDVLADGP STDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELS CVARDTKLGSEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKV TPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNSVSGTIIDVQVFTRD GVEKDKRALEIEQMQLKEAKKDITEEFQILEGGLLARVRTLLVAAGVSEV KLDAMDRKQWLEITLDDEAQQNQLEQLAEQYDELKAEFDKKFETKRRKIT QGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPVEDMPY DEKGQPVDIVLNPLGVPSRMNIGQILEVHMGLAAKGVGDKINQMLKEQQE LHKFRNFLQKVYDLGETRQEVDIAALSDDEVRTLIKNLRGGLPIATPIFD GAPEASIKELLKLVDLPESGQLKLFDGRTGDAFERPVTVGYMYMLKLNHL VDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ EMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIE LEDEE >VFA0963 transcriptional regulators, LysR family MDLIQLSRISFKHLTALHIMLSTHSVTKSAETLCMSPSSVSKTLTQLRKV LNDELFYRDGTQLIPTPYAVKIGPTVHLILNNMNGLLNQSTFDPALFSGR FSLSMRESTLEVFAPVISDILSNQATNAQINIHSKEQLGFDALLNGQVDL IILPHDKSQPPTNEKQLVWESVIEDEMVCLMREDHPLAKDELTIEDYLSY KHIGIFDKELNKPYFEQLLTQQHQSRTMAMFVADFGSAAAMCQQSDFLFT SSKKWFEVTKQAQGLVQKTLPFGYGQVAYSVVYNKLSLNDQALSWLLNRI KEQVSDITFE >VF2460 ATP-dependent DNA helicase RecG MTNTMLSAIPLTSLAGVGAKVAEKLEKIGLVSIQDLLFHLPLRYEDRTRV YPMARVHSGLFAAVQGKVMSCDMQFGKRKMLLVKISDGNGTITLRFFNFN AGMKNSFSEGKLVHAYGEIKRGGSGLEIVHPEYQFHVPSQPLEIEASLTP VYPTTDGLRQNTLRSLTDQALELLDKAAVTELLPQGLYNNQITLNQALHI IHRPDPSINLDAFDEGKHPAQQRLIMEELLAQNLSMLSVRSKGQQEDALP LATLTNLKQKLLAQLPFTPTNAQQRVVAEIEQDLAKPHPMMRLVQGDVGS GKTLVAALAAVQAIEHGYQVALMAPTELLAEQHAANFAHWFESMGITVGW LAGKLTGKAKEKELERIASGEAKMIVGTHALFQQNVEFHHLALVIIDEQH RFGVDQRLELREKGQKNGAYPHQLIMTATPIPRTLAMTAYADLETSVIDE LPPGRTPIQTIAVPDTRRDEIVNKVRSACMNDGRQAYWVCTLIDDSEVLE AQAASDTAEALRLQLPELNIGLVHGRMKPKEKQQIMQEFKEGNLHLLVAT TVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHS PLSKTAQKRLSVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIAD LVRDQHLIPEVQRIARHLHDNYPKNAKAIILRWLGERDIYSNA >VFA0034 transcriptional regulators, LysR family MVSNIDLNLLKVFVVVYRHQSITLAAEEMGLTQPGVSGLLKRLQQQVGSQ LFIRSGRGIIPTQHAQELIRHVEPALAQINNALEGLEGFSTQYPRKFVIY TSEPVMLMLLPKLEADRSLGNVTIELHPTHSNEEALIQALNQHQADLAIE ISNYSTGSFFTEHLFDDQLRLIARKKHPRLTGGVTREQFYAEKHITLKLR REDTYMADYFTEERLSERQVAAECTSLVSLMSMVATSDCIAMVTESIATA FADKLDIQMLDCPFTSKPVKYRLLTHNRERQRPANMWLREKIKSYFSG >VF0782 transcriptional regulator, MerR family MNISEVAKLTGLTAKAIRFYESKGIIKEASRGANGYRQYTQHQVDELLLI RRSRLVGFSLDECQELLNLSNNPNRRSADVKQKTLEKVSEIETKIEELER MKKTLLDLADACPGDDSNDCPIIKGLTCCHEKK >VFA0255 transcriptional regulator, AraC family MAIARHIQASVTFDTLPSDIYLLFDAFRSNTETRSHSHSWGQLQIISGGI LELEAEGHRFLAPSHFAIWVPAGVQHQSYNRKPIAYCSVNIIPELAKQLP DHTCLLEVSPLVEVLIAELRENKIQQAQNEQQERLIHVLFDQLLIAKQSE RFLPTSQDKLLKPILEALEANPADETSLAQWAERNHTTERTLARHCQNEL GMSFTEWRLRIRYLYSLDLLRKKMSIKEIAFSLGYNQTSPFITMFKRYAD CTPEQYKLKHSI >VF1570 TorCAD operon transcriptional regulatory protein TorR MSYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRSILAEQKVDLI MLDINLPGEDGLLLARELRSQSNIGIILVTGRTDSIDRIVGLEMGADDYV TKPVELRELLVRVKNLFWRMSLANEPVELDESNVVRFGEWTFDIQRRALS NNGEPVKLTKAEYELLVALSSYPNTVLSRERILNMISHRVDAPNDRTIDV LIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD >VF2037 transcriptional regulator, Cro/CI family MDTFGSRLFHLRKARKLTQSSIAKASGVSRSSVTLWEQDTNKPKGESLMA LASFLKCDVNWLLTGQGSPEPAKQEQETTVVSVALKPQGSYPVISWVQAG GWNDIHLTDLHDADYYPCPVRCSKNTFLLKVVGKSMNPVFREGELIFVDP DVEAVNGKYVVARLDDENQATFKQLIIEDGKKFLQAANPDWPTPIIPING NCTIVGVVISSMKLF >VFA0254 hypothetical protein MLDESTSMESISRRIEARKTELGLSNSQIATACDVSTRTVINWTSGLSSP HISKLIPLSFILRKEIGWIISGSDNIPDWLGVTMSDVIEFHQELSKYSKS ERTMLFKSISNLIEQFGFILKAKDKK >VF1260 transcriptional regulator, TetR family MKEEKRVNALKKTIELCALHGFHGTSMDKITAATGLSKATIYKYFQSKEN LIANALELFSQQSLSHVQALFENTELTLEEKIALRFEGLAGCIDIESFNG CYFQLAYSEYSSEDQGITEVSAQYKQRTQELLIELFKRHDIKDAELKAKK AGLVYNGLLASLQLTKDAELIELAHQMFLGIIFKSE >VF2414 DNA-directed RNA polymerase beta chain MKAAFRSVFPIQSYNGNSKLEYVSYNLREPEFDVKECQIRGVTYSAPLRV KLRLVVYDKDAPANTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQ LHRSPGVFFDSDKGKTHSSGKVLYNARVIPYRGSWLDFEFDPKDNLFVRI DRRRKLPATIILRALNKTTEEILDLFFDKVFLK >VFA0489 transcriptional regulators, LysR family MIDNKRLMNVDLNLLLLLQVLGKEKNTRKAAERLFVTQSAISKGLKKLRE QFDNELFISSNKGLEATPFCEEVQLKLPRLLEELTSLYDTHSNNDYASYS GTVSIAINPSLTFPFAELIQNYVQEKLPNASLELVNWSWNTELHIKKQMI HLGINYYPLTLTKHIVQQPIADVKFNLCLSTAHPLLNQEITMENIAKYPL VMNLMPDYVKQQNHVERLLKEANLTPKVALKSDIMSVCLSTLEKTESVMP IHSLIRPSLPSSLTLAEFSPSIEASIPKNQIALYTANSSEQTMISRQLED DIKAIILSLS >VF1909 nitrate/nitrite response regulator protein NarP MWNVVIVDDHPLMRRGIGQLLSFDEEFTLTGEASNGTDAVALISQDEPDL VLLDLNMKGMSGLDTLHALRNEGVTCPIVILTVSDNKQDIKTLIKAGADG YLLKDSEPDELIALLKEAMKGGKAYSEQVKTCLEEDAQGDDKLSQLTARE LEILQHVAKGMRNKQVADKLFISEATVKVHMKSLLKKLNVKSRVAATLLY LDS >VF2449 RNA polymerase sigma-32 factor MFFNLRKNKKRLGWFNNGEVEAVAKDLGVAPSEVREMEARLAAQDSTFEA PAEDDDRDMAFTAPVYYLEDKQSDVAYSLEEDNWEDYTNNRLANAIATLD ERSQHIVQSRWLADEKATLQELADTYQVSAERIRQLEKNAMKKLKDAVGD VL >VFA0595 cold shock protein MAKATGTVKWFNEEKGFGFIAQENGPDVFAHFSQIQSEGFKTLKEGQAVS FDVEQGQKGPQAANIVAL >VF0904 leucine-responsive regulatory protein MVDNKKPSKELDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRR LERQGYINGYTALLNPQYLDASLLVFVEITLNRGAPDVFEQFNAAVQLLD DIQECHLVSGDFDYLLKTRVSDMSAYRRLLGDTLLRLPGVNDTRTYVVME EVKQTNHLVIKTR >VF1396 transcriptional regulator MKILVVEDDLRLGAQIVETLESADWVPELSQDGVDALYRATTEEWDAIVL DLGLPKLNGLTVLKSIRDENINTPVIILSARDTLSQRVEGLNAGADDYLT KPFEMVELIARIRAQLRRASGNASPILKIGDLSLDTRSSKVLWQDQAVSL TALEYKVVAYFMHNPDKVISRTTLVEHIYKQDFDRDSNTVEVFIGRIRKK IAPNIIKTVRGLGYQLNS >VF2522 transcriptional regulator, TetR family MKEKRQLILESAEKLLATDGFHGLSMQKVANQAGVAAGTIYRYFDDKEAL IEEIKLNIMQRVATAIQKDIDDNDPIKVRFRSMWLNIWHFAISEKNTFLN RNQYEALPSSNLIKLKELEKKIFAQVNQLFIDGLEQGVFKPLSVEILVGL SLEASVCLARKHSQGFFTLTDDDLNSAIEASWDAIIKH >VF1530 transcriptional regulator, GntR family MQYLTIKDAIEEQIDTGMFEAGQKLPSERTLAETFSTTRITLREALNHLA LSGKIYKEERRGWFVSTAKLIFNPMQCIDIAEACKEQKRNCRIEALSSHR LLATKEMLTVLKLSPFSYVKQQVSLIHIDGRRVAVQYRYIPEEMTTLLSH DEQTDVLTQLLNSFEYDSEKHEIEVGIIPASQLESDALNLSSGSMLLSIN QVACNKSQTPFLLQTIRCCHDAINLKISQTA >VF0121 transcription elongation factor greB MKTNLITREGFNKLQDELTFLWKEERPEVTKKVTWAASLGDRSENADYQY NKKRLREIDRRVRYLRKRLDQVKVVDYSPQQDGKIFFGAFVEIENEQGDT LSFRIVGPDEIFGRNDYISIDSPMARALIKKEVDEDVIVKTPDGDKEWFV NSIRYQV >VFA0931 transcriptional regulatory, AraC-like MSDTLLKVQTYSGVNDQHLRNVHIYAPSIIWVKSGIKRVIQGTENYDIDA QLWLLTAANQDLSFINKPAKDHFYSVQICFLFPPTPEMIEESKENRRRHE HLNAIKVSSTLAYGFSLLIEMSSQNLSSNVQKHHLFAFYQQLVEVGALHV LFSESHDSLQNKLSAYFSKDPAENYQLDEVSHAFSMSRATLIRRLNQDGT NFRTVLANVRMSHALSLMQERKQSQLDLALQCGYQSETRFSQRFHQQFGI TPKQYMKTVSY >VFA0024 transcriptional regulators, LysR family MDFSNRLLLLLEVTELGSFTNVAEQKNLDRSVISKQISRLEEELGVRLLN RTTRSLSLTAAGNEMVNQAKLLRDLLNNTHRLAQNYHSEPRGILRITSSM MFGRQYVQDAISVFQKQYPDVKCELRLEDRVVDIVQEGFDIGFRIGRPKN SSLISRKIARSRLLIVASPDFIQQHGKIETIEKLESLPATIYAAPGLFID KFTYLDENKVEQQFHLNVAYKVNDVEMVVKSAVAGNTLAVVTAQMIENEI IEGKLIPIMTHLNLEDFGTFFAVYPHRDAPIKTKLFIDVLKSIIGEDSPM WEKNIPDFAKLYGGTK >VFA0454 histidine utilization repressor MSQPRYLLIKQYLNEKIQTRTWPIGYKIPTEIDLANEFSVSRMTANKAIK ELVNEGLLERTPRLGTFVCHKKAESPLMEIRNIATEVHQRGHHYSSKVIK KEEVIAKDDIALKIGVRNDTSIYFTQIVHYENDVPIQLEDRWVNPLFVKD YLKQDFTLQTPNEYLVQICPLSDIEHSVEAIIPNEHVSELLHMDNKTPCL LLNRRTWSEDKLVSIALLYHPGDRYKLTSRSKV >VFA1142 transcriptional regulators, LysR family MYSFEQLKIFVTVCECGSFSAAARQLKRAQSGVSQAIANLEISINQELFN REKNTPVLTEKGKALLPIAQSILHQQKYFDQKVESLEREHEYELVIAIDE SLINDDLLQILATLADKFPVTDVEIITTSTFDVEDLVRKGKAQVGIVYAD GELKVDMDFFTLGQIRFLTVAAPDHELAALPMVNDAALKGHRQLVHRSSK GKELWFSYGISSKLWYANTHQALIELACRGVGWTIVPEHSVTSFIEEKKL VALPIAHEFHGWLTPMGCLVSRRHAFGPVLEDLLSSLQELSKAVH >VF0150 hypothetical protein MNVFLVTSPFQYICAIEAKFHYKSKNNILILIEQNSHIGKKQMSSLIKNE DWDYIFTFPRSNRTFITPKIIKKIKQISSNKLDTLFYSEYNAWRSKLIIK NLDFQKHVFFDDGTMTYFDYYDYIEPKASFYRPRFLQDIQLRLQGITPIS KLDFFDNTEIFSIFEFKNCVITYTENKLNVLKKRINRLNNTSQFEYDVFI GQGSVDEKNRISLKEYITLIKSVLSESKSYLIYIPHRTEATHVTESIKKI NGVIFHQPNYPIEVELVENNITPLTITGLSSTALYTLSKIYPNSKIKLVD QQSISKGERDKRIQLYLNEYFDKIK >VF0616 Rrf2 family protein MKLTSKGRYAVTAMLDVALHAQEGPVPLADISERQGISLSYLEQLFSRLR KAGLVASVRGPGGGYRLGLKAEQIAVGMVISAVDESVDATKCHGKEGCQG GTRCLTHTLWRDLSSRISTFLDGITLGELMQDNEVQQISDRQNVDLAITN GLTTNSKLTNSVGVNVRS >VFA0151 ATP-dependent RNA helicase MGFTSLGLSAPILKAVEEQGYSTPSPIQLQAIPAVIEGKDVMAAAQTGTG KTAGFTLPLLERLSNGPKRKFNQVRALVLTPTRELAAQVHESVEKYSKNL PLTSDVVFGGVKVNPQMQRLRRGVDVLVATPGRLLDLANQNAIKFDQLEI LVLDEADRMLDMGFIHDIKKILAKLPKNRQNLLFSATFSDEIRQLAKGLV KDPVEISVAKRNTTAETVEQSVYVMDKGRKPKVLTKLIKDNDWKQVLVFS KTKHGANRLAKTLEEKGVSAAAIHGNKSQGARTKALANFKSGQVRVLVAT DIAARGLDIEQLPQVINVDLPKVPEDYVHRIGRTGRAGATGKAISFVSED EAKELFAIERLIQKVLPRHVLEGFEPVNKVPESKLDTRPIKPKKPKKPKA PRVEHKDGQRSGENRNGNKQGAKQGQKPATKRTPTNNPSGKKEGTDSDKK KRPFSGKPKTKGTGENRGNGSNFGKSKSTPKSDVKPRRQGPRPARKPKAN >VF1063 transcriptional regulator MSMLDLHWLKTFVTLAELKHFGKTAAALHMTQPNVSLHIKQLEAATRVKL IERNPFHLTEAGNRLLMTSQNTLMELQVCQADLNAINDLSRGTLTIAASD IISRLLLIGPFQLFKQEFPGIDFSLLNTTSSQASELVKSAEADLGFVIAQ KESQPLHFTELQQIKWCALGNHLEEWQQAYLDPTIVVDEEPTLILLGHDT RTRDLLDLALPSLKLPKYRIMEVGSVDAQIDWAEAGFGVAIVPEFSIHPK RDLKTKVTPLPEFPTTSLGYIVRQNQILSKAIKQLLKWVDDEIIRSQK >VF2080 GTP pyrophosphokinase MVAVRGAHLKENETFELAEWIDSLEQDKPTSKKLTEVYQHCQELVASHEN GQLLLWRGREMIEILITLSMDKATLVAAQLFPLVSSGLLDKETLTEHYSK EIEKLIEGVEEMDSIGQLNATVGPESASNQVDNIRRMLLAMVDDFRCVII KLAERICNLREVKNEPDEVRRAAAKECNNIYAPLANRLGIGQLKWEIEDY SFRYQQPDTYKKIAKQLSERRIVREQYIHDFVTDLSDEMKVCNINAEVSG RPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGVVHTKFK HLPSEFDDYVANPKPNGYQSIHTVVLGPEGKTIEIQIRTKDMHEDSELGV AAHWKYKEGPGSNSRSGYDEKITWLRKLLDWQEEMSDSGEMLDELRSQVF DDRVYAFTPRGDVVDLPMGATPLDFAYHIHSEVGHRCIGAKVGGRIVPFT HQLSMGDQVEIITQKEPNPSRDWLNPTLGFVNSSRARAKINAWFRKQSRE KNLDAGKEILEVELAKIGGTLKDAERYALKRFNVNSTDELFAGIGSGDLR INQIVNHINALVNKPTAEQEDQKALEQLQESEAKAQAQAQAQSKQRKDAV VVEGVDNLMTHLARCCQPIPGDPIAGYITQGRGISVHRSDCDQLNELRHH ASERIIDTVWGSGFVGSYILTLRITAMDRTGLLKDLTTLFANEKVKVSGM KSRNDYKKQLTIMDFDLEVFNADIVGRLITRVEQVKDVMEAIRLS >VF0463 transcriptional activator HlyU MDLQMMEDNAPQAVTLLKAMANERRLFILCLLLDGELSVGQIAEKLELSQ SALSQHLGWLRRDELVSTRKESQTVFYSLNSQEVRSMIQLLHDLYCQK >VFA0506 two component response regulator MRHYLSLVCGFIFLFAPMSLFAHEMKPLNILVLHSYSPSYEWTMNIQKGI SESIAKVDRNVRLSVEYMDSKRVNGNDYKAQYLTYLKHKYSEGYFDAIIA SDDNALNFLIKNANKTFPKLPIVAVGINNLLIDLAEIEDRTTVYYERDHI VKNLKLSQSLFPERKTVYLFSDNSLTSQLVRKQFIEDAKVFPNLTIKIID DLSLKEAEQFLAKAGDDSVAFLTHFNTELKKGNYYDYGAIASVLSKESNI PIFVFWEHYIGYGVLGGYVNRSYALGIQSILSLSNKLHFTVNEKVSAYPV AWEGYVFDYGIVDKFNIDRDDLPYASSIVNEPESYLYKNRNIISVTALLI IMMLGIIVTQYIAILRKKELDENKTHILKLQKKTLNVQKEMINVLGEAIE TRSGETGNHVKRVAKMSSLLGRLYELPKSEYQLLEVISPMHDVGKIGIPE AILDKPGKLTPEERTIIETHTIMGYKLLMSGDGEIMQSAARIALEHHERW DGKGYPNQLKGEEIHIFARITAIVDVFDALMSKRCYKEAWPLERVIELFK QERGQQFDPNLSQLFLDNIYSFIDIRLEYPD >VFA0893 transcriptional regulator, AraC family MAKQNPIYLIRVYAAKMLIEHAMKHYGLSHSDFNMPSDLFNYELKLMPLR DFEALLCKIEDLTQDPAYTAKLSQSTNLKQFGPFVQLIASSTNLGMAIKR VNTVHNAIQSGVQVNMLLSGSIAKWRFLSPTTLPQARIHESILAAGSFLR LLKLFHGEDYQPIAIHLTGTPSSNQHEVESIFNCPITWNCPNTQVWFPVK DITCPRRFELPTSQIKAFTVEQAMSYMLIPQPHDILKVVFELTKYALFYG YPTLEFVADKVGMKPLTLQRRLQEQSISFTNIVHHSVCDEAITLMSTKLT MDEIARRVGYKSTASFSVAFKRMYGVTPQLYRQDYI >VF0791 toxin transcriptional activator ToxR MNTENNKIIIGDRFLFDPNDNSLIDTLNDDEIIRLGGNESRVLSLLIQEP GKVVSRHELHEYVWRDQGFEVDDSSLTQAISTLRKMLQDPTKLPVYVKTV PKRGYQFISTAVAQVDPDQQTEVETEHNLENTPSIDSLNTASVHQDDAQE AQAVAPQQNATINQPSTTNSAPQAHLSLLGTIMLIIAFVLPIIAYVNHTP KSDAFVQVANYDNTPVFVPVNHPSIEQWKPLIEQCTNFYNSKHTDSLKPI EVIATSGQPNQITLNYIHSEEHSDQSISVRLLIDQKGVDKVCG >VFA0374 ATP-dependent RNA helicase MVCYNQRQLLSIHRFIMSFASLGLTKQILTTVAELGFKEATPIQEQAIPL VLQGHDVLAGAQTGTGKTAAFGLPLIQRLIESPIERHEESKVVRSLILTP TRELAQQVFDSLVSYTQNTELKVVVAYGGTSINVQKENLLGGADILIATP GRLLDHLHIKTITLNQAEYLVLDEADRMLDMGFIPDIKKILRKMPDERQT LFFSATFSKKVREIAYYMLNKPKEVQVTPTNSTAETVEQMVYPVDKHRKS ELLAYLIGSRNWQQVLVFTKTKQGSDELVKELKKDGIKAASINGDKSQGA RLRALEEFKTGKVRALIATDVAARGLDIEQLECVINYELPFKAEDYVHRI GRTGRAGHTGKAISLMSMDEEYLLKAIETLLDTRLPQEWLQGYEPDPNAP LREDRPRQSRGRSSDKRKMKAKLKIHANRGKNKR >VF2420 transcription antitermination protein NusG MFEAGEVVRVTEGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFS QVEKN >VF1790 ATP-dependent RNA helicase MPFSKLGLSDPILKAIDELGYKAPTPIQQKAIPVALTGKNLIAAAQTGTG KTASFVLPILEILSEDPTKVRAKRIRALILTPTRELAIQVEENIQQYSKH IDITSLAMYGGVDYKEQKQRLIEGVDVLVATPGRLLDMYTQRAIHFDELD ILVLDEADRMLDMGFIEDINKIIERLPLDRQNMLFSATLSDQVRYLAKTA INNPIEISISPKTTSSPQIDQWLTTVDKDKKSALLSHLIKENNWNQALIF IETKHGAAKLVSQLEKRDIRAEAFHSGRSQEARAKVLNDFKEGKLQYLVA TGIAARGIDIDELTRVVNYDLPFPADDYVHRIGRTGRAGAKGEAISFVSK DDFKNLCMIESRLGHLIVRKEIEGFAPRKEVPISILNYKPKRKPTPKN >VF2182 pyruvate dehydrogenase complex repressor MTYQRIRQPKLSDVIEQELERLILEGILSPGQKLPAERELAKQFDVSRPS VREAIQRLEAKHLLTRRQGGGTFVNKGLWQSFSEPLLDLLATHPETQFDL LESRHALEGISAYYAALRGNEEDFKRIKESHRLIQQAQKNGDLEAEASAV MHYLITVTESAHNVVLLHMVRSLEPLLEQNVLQNFTLLNRRESVVEKVRE HRAEIVEAIVSGKPEEARLASHSHLAYIEETLLELTKEESRRECSLRRIQ QNNDMN >VF0972 RNA polymerase ECF-type sigma factor MLSEWQNHKAQLRNYVYKRVDDASAVDDILQDVYIKASSNLHQLKSKGSL KGWLYKIAYNTIMDFYRDKLPYDELPEDLVAEDEDAVEESRKEIAECMRP LIDELPDKYSVPLRLAELDGIPQQEIADKLGLSLSGAKSRIQRGRVKFRE NLMTCCDFEINDGGMVTGYTPKKTNCSSPKR >VFA0400 PTS system, mannitol-specific IIBC component MTMSPSQDQTENTDMLTEIAILYYQEGATQEEISKKFGLSRAKVGRMLRK AREEGIVEITVKFHPVYSVQLEQKLVEKFNLKRALISLDQPNTNEQRKQV AALVSSYLNNNLQEGMAVAVGQGQNVAAVADHAGIVTQRNARFVSAIGGT HRSGDIINADHICRRLAKKYGGSSETLYAPAYVNDPSLRSAFMEHATIKE TLSQARKAEFALVGIGDMDENSHMVKLGFFTPKEFVEARLNDGIVGDIGG FDFFKLDGTDADTLMRGRVIGLEMEDLRQIPNVVAMASESRKALSIMGAL RTGVIDVLATSVSCAMALLNLAENEE >VFA0811 MalT regulatory protein MLIPSKLHFPRRLHNAILRQRVLDTLENAMHYKLVLFRSPAGYGKTTMAA QWLSDKDATGWYSLDESDNDEYKFAKYFVQTISNATHTELSHSKALTEKR QFASLSSLFSQVFTELISFQDEAYIVLDDYHLITNDTIHLGLKFFLKHLP DNLTLVITSRSQPPLNTANLRVRDLLIEIDNQSLAFDQSETSLFFNQRLN ENIDQEAITHVREHVEGWPSALQLIALHSIQNNQSLNNSAQVMAQLNHAH LWDYLAEEVFDHLDQETQQFLMRCAVFDHFNTTLLSKVTQRKDAQLLIEN LNRFGLFINTNGEQGDWYKFHNLFAEFLTHQRQNHLAHEEIDLQKYAAEA WLEHDNIYQALRHAKNAKDDILIANILTQHGWHLFNNGELSLLETTISDL RPEVLFTSPRLVIIRAWLAQSQHNYLQVNDLLSEAQREMADRNIVLDRHM QGEIDALRAQVAINKNEPEAALAFAEKALEELETNKYRSRIVATSVIGEY HHVSGNLAQALALMQQTEKMAMTYGIYHQALWAILQQSEILMAQGFMQAA FDLQDNGFKLIEDQDLHQLPLHEFLLRSRAQIYWFWFRFDEAEQCTWKGL DVLSPFDETKHLRGYSMLARLAVARGELDKAERYLDKCQQLLGQSDYHID WKANASSAQLFYWQAKNNSEAIQYWLAQAERPETRCNHFTQLQWRNIARA QFHLGDIDTAIETLQTSQTIAQQHKLITDINRNAILAAILLYENKQIDEA VEAMHLAIKQSNQTGIIGSFLMAGRNVLKPLGKLQQKGNVTELEKHRIEQ LQKALSNNERSRSAHFDETFIEKVLNTPEVPELIRTSPLTHREWQVLGLI YSGFSNEQIAAEFDVAPTTIKTHIRNLYQKLNLPNRKAAIAMADELVGMM K >VFA0820 RNA polymerase sigma factor SigZ MKLEVIWSEYQLSLKAFLRSKVSNPEDVEDLLQEILIKTHKNLKTISDTK KVKSWIFQIANNTIIDFYRQNNRRTELLADDLWFDEENEEQVMKELSRCL LPFIEQLSNEDAKLLSAIEIEGISQKEYAEKHGLKYSTLKSRVKKSREKL HDLFTNCCDFSIDVQGNLIEYQSKTGKCNRC