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2024-05-20 00:30:13

Gene list

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COG category: Transcription
Organism: Borrelia garinii PBi, PBi

Number of genes found: 29

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Borrelia garinii PBi, PBi
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BGA20 conserved hypothetical proteinSubName: Full=Uncharacterized protein; lp54 CDS15991 324 + 0.231481
NA BG0348 fibronectin/fibrinogen-binding protein, putativeSubName: Full=Fibronectin/fibrinogen-binding protein, putative; chromosome linear CDS354239 1419 + 0.2537
NA BG0744 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS762105 1446 + 0.246888
NA BG0356 transcription factor, putativeSubName: Full=Transcription factor, putative; chromosome linear CDS363864 489 - 0.292434
NA BG0845 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS868386 201 + 0.298507
NA BG0753 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS773052 402 - 0.228856
NA BG0241 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS242882 771 - 0.290532
NA BGA72 conserved hypothetical proteinSubName: Full=Uncharacterized protein; lp54 CDS51911 774 - 0.268734
NA BG0536 conserved hypothetical proteinRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome linear CDS539701 789 + 0.259823
NA BG0807 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS823062 1185 + 0.244726
NA BG0755 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS776543 786 + 0.291349
NA BG0038 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS36448 1539 - 0.252762
mfd BG0642 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome linear CDS652347 3375 - 0.268741
ntrA BG0458 RNA polymerase sigma-54 factorSubName: Full=RNA polymerase sigma-54 factor; chromosome linear CDS472236 1158 - 0.253022
nusA BG0826 N-utilization substance protein ASubName: Full=N-utilization substance protein A; chromosome linear CDS844927 1449 + 0.31608
nusB BG0108 N-utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome linear CDS105238 429 - 0.275058
nusG BG0395 transcription antitermination factorRecName: Full=Transcription termination/antitermination protein NusG; chromosome linear CDS407992 555 - 0.320721
recG BG0593 DNA recombinaseSubName: Full=DNA recombinase; chromosome linear CDS598468 2061 + 0.306162
rho BG0233 transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome linear CDS234544 1548 - 0.312016
rnc BG0727 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome linear CDS742582 738 + 0.327913
rpoA BG0514 DNA-directed RNA polymeraseRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome linear CDS510137 1035 + 0.304348
rpoB BG0390 DNA-directed RNA polymeraseRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome linear CDS402341 3468 - 0.343426
rpoC BG0389 DNA-directed RNA polymeraseRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome linear CDS398192 4134 - 0.329705
rpoD BG0734 RNA polymerase sigma-70 factorRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome linear CDS750021 1896 + 0.311181
rpoS BG0794 RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor; chromosome linear CDS814304 801 - 0.27965
spo0J BG0441 stage 0 sporulation protein JSubName: Full=Stage 0 sporulation protein J; chromosome linear CDS453353 783 - 0.270754
spoT BG0196 guanosine-3,5-bis(diphosphate)3-pyrophosphohydro laseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; chromosome linear CDS195286 2004 + 0.283433
xylR-1 BG0716 xylose operon regulatory proteinSubName: Full=Xylose operon regulatory protein; chromosome linear CDS735998 1209 + 0.286187
xylR-2 BG0856 xylose operon regulatory proteinSubName: Full=Xylose operon regulatory protein; chromosome linear CDS881253 936 + 0.29594