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# Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

>Bd2625 hypothetical protein predicted by Glimmer/Critica
MGDFVSNQFGALLKNKLEEIQKKNPRFSFRSLAKKVGISPGCLNELMHGK
RPLSEFYANKIVLGLELGAEERNEVYSLISTRSRKFAAQKTLAEKELELI
ASWEHFAILNLIRMKTFKPEPEWIAERLALPLEKVQQSLELLLDLGFIKR
KGNSIARSVASLATTTDIPSEALVQAHVSDMHKAIEVLKRTPIDRRDYSA
ITMAINPHKMEEAKNLIKKFRRKFSMLVEEGDMTEVYNLNIQFFPLTVTE
SEKPL
>Bd1745 transcriptional regulator, LysR family
MDKSPDCDRCLLMKYKIRDIENFIHTSTCSTIIQAAQKLEISQPALSESL
KRLEADLGTILFYRSRSGIQLTPSGRVFLGKAQRALQSLQELDFSSDQVR
VFAGRTVTIGCHGTVAQYSIPKAVAYLKEKAPDFKIDLRHDLSRSIQTEI
QRGNIDIGVVINPAEVPDLVIQKMAQDTVGVWAAKNESYDTIICNLNLFQ
TQSILKKWKGRPEKVISTDSLELICKMAHERIGYGVVPGRAVEMSGLNLK
HLSQFPVYRDQISLVYRPEFGKIPAEKMVIEALKHSILGL
>Bd1570 GTP pyrophosphokinase
MFNFLKEDGLTNKPVKTVDDLLARIRVYYPNADLKIIEKAYSFSEKMHEG
QIRRSGEPYISHPLSVAAILADFHLDLDTIATGLLHDTVEDTAATLEDIR
REFGDVIAHLVDGVTKIGQMKFKNSHEKQGENIRKMIVAMGKDVRVVLVK
LADRLHNMRTLNFMPFEKQERIALETLEIYCPLAGRMGISALKIELEDLC
FRYYRPDMYYELVQQIKKTEAEQNRYIEEVKHLIGKELTKAGFRYEVYGR
SKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAECYAALGLVHSLWKP
IPGRFKDFIAMPKANNYQSLHTTVMGPGGERIEIQIRTSEMHLVAEKGIA
AHWKYKERGKMMDDGDLQQANWLRDLVSWHQNVRNPDEFLDTVKTDLFET
EIYVFTPTGDVREFPEGATPVDFAFAVHTELGNRIVGARVNGKMVPLKYQ
LQNGDTVEVVTSKTQVPSKDWLKFVVTNKAKSKIRAFVKEEQRRRAIMLG
KELVEKEFRKFGMAAVKYLKGPAFEAYLKDHGLADLDELYVTVGYGKLET
RILVERLSPENIAKEAAKTEDTTFMERVMRAATQKTRKTNSLISVDGMDD
VLVHYAKCCHPIPGDPIVGFISRGRGISIHRSDCRKAFEFDQLRKVDVTW
NVKQAGEGQERIVRLKIISQDVPGLLKLMSEAFAQQGINIQSAQIRTTKD
KKAVCNFEVSVQNASQLNQAVFEIQKIKGIIGVTRVIH
>Bd2408 putative DNA-binding protein
MTSFDVLAQNLAAQITELRKKRQLTQAALAKLAGVPRSTLTNMESGMGNP
SLVNLAKVCAALQVSFEELLATPRSQTKLIRKDEIPANKKAKGNVTVYKL
LPDPIPGMAIDRMELEVGARMGGIPHSSGTKEYLHCVQGQMTVVVSGESF
ELKPGDVLAFPGDSAHNYVNTGATKAIGLSVVTMTPRY
>Bd0374 putative transcriptional regulator PhoB-like
MKDKRINTKDLIEKIEKMTKARIASQEVVPLDQFREAKKKLDPKIILVIE
DDETMRLAMKRILESEGYVTKLAADGTELSTVLDDHSVDLILMDVGLPWI
NGFELAQLLKEHRDLKKIPLVFVSGKASEEDMKKAFEIGADDYIKKPFDV
EKLKKTVETLLKLNP
>Bd2320 putative CarD-like transcriptional regulator
MQTFDVGDNAVYPGYGVVKVVSIETKEMLGTKTTFYNMQLVDTGLKIMIP
TTNVKSAGLRPIISKSEASRVVGILKEKDIKIDNQTWNRRYREYMEKIKT
GSVFEIAEVLRDLFLLKADKELSFGERKMLDSARSLLLKELTLATSQEEL
FKEEEVKAIFGITG
>Bd3242 transcriptional regulator
MQKTRLAPASSQSYSVHMELGPQKGFSLNMMSSEEKTKKTKIIVKAPTQE
RSRQTVATILDACSRLLVSEGFYSITTDKIAKEAGVSIGSLYQFFGNKES
VVQAVVKNILEEDKRIFSEKMRAISPLPPEQRVKGMIELAVETTRRNSEL
RSKLTTIQYYVAEAAYMSETIRFFQEVVRYNLPQIPGRDMEKISYIMVNA
FIGLTNTMAIDNPTAIHDTAVVEEIYQLFHKYLDLSGPAPVAAVNRNKGD
FI
>Bd3337 hypothetical protein predicted by Glimmer/Critica
MKFAAGLLTLLMSLGAFAQESRLKLPAEAPVSLLAAYPINYEMRYERGNS
GDLESRQPRNFSIGYHRKHYSVLVEYADFTDTTGNSTSSIERRHQDMTVW
GRYNALSGKEGGMRGVIYFGAGVGGYEEEVITRFMTDSRSDKTGMKVMGG
LSAGLELFILSTSQFGVTVGMEGRALMGSDFDPNPTLGAVLRAGLVVPL
>Bd1294 hypothetical protein
MSTKKSDAIKFLDKIIGEPVSFGATLQAIRLSDEMTQAEMAKKLGITNAH
LSQLERGHKFVSPERALSFAKKLGYPPKVFISLSLQDQLQRAGIKFKVSL
EAA
>Bd0255 similar to ATP dependent helicase
MRKVSLDVRQFALPCPRRGSIELHSGYGAPPMSGQEIHMAIQRRRQREFD
DYTPEKKMSWVFEAGPYEFHISGRADGITENPVQIEEIKTAFDVEELWRK
LRSDDNHPYIWQLRTYGYFHYKETGRIPFLNLHLVSSRNFKSMDLRVELD
IAHYELWLALRLDELVEETKVKEKLFKARQKMAEEMSFPFATPRPGQREL
IEGIEAQVADEHPLLVQAPTGLGKTVGVLYPNLKDSLSRGQKTVYVTPKN
SQHIVAEEAVEKLQEQGSKIRSLTLTAKSKMCLKAETLCNPGYCEFARDY
YTKLAEHDLVNKLSKKRKLTQEKLVEMGKEFEVCPFELSVEAIERADVVI
GDYNYAFAPRSLLGRLSEPLLEAGEKPNLVIDEAHNLPSRAQDYFSPSLS
VQELDILEGDFTKLPPTFSLQAGSLIRKAKSLIQEYGEDGGSRKVDIDIE
PFLEHERSIRALTTEYLDSDTEIITRDPMLRLMNLWSEFIAALEYRGPEF
FTTYQNSRFTEMLKVTCCDASEQLKIAYKQFKNVVAFSATLKPFTYYQEL
LGFDLEKSKTLEFQSPFKPENRQLMIIPQISTKLSDRVVSSGKVAEVISR
VTRVKAGNYIALFPSFEFLAQVEKQLQVPHLRVLRQERDMKQLDVQIYLE
ELKAANEPILLLGVQGGVFSEGVDFPGDMLIGAFVIGPALPSFDFEREQI
RTYFDGRYGKENGFNYTYVYPAMAKAIQSAGRVIRSETDKGVIILMDSRF
LNPVYAEAMPQGWFKESPRELVSQKILADLETFWKNSDTPCS
>Bd3631 conserved hypothetical protein
MDKKKLIEAIRTQLVADMTALKEAVKATIDAATNEESKAENEYDTRGLEA
SYLARGQAKRIADIEEVLLLLKHLSVRDFGPNDGISSSAVIEVEHNGKTS
FFFILAKGGGVSVQFEGKTIQVVTPNSPLGEALLDQKVGGVAVVENGPQV
REYDIINIW
>Bd2559 hypothetical protein predicted by Glimmer/Critica
MFMSDEIVLHIREELVRRRAKNPRYSLRALAVFLGVAPSVLSRALAGETV
LSERNRTRIQARLRKPEK
>Bd1451 transcriptional regulator, MarR family
MTNYVTSYIISLMELFKRAGKMAMGTRVRFLSEQIGQDAAEIYRVYENDI
QPKWFPVFYVLSNEEQNTVTSIAEAIGHSHASVSKILTEMSKAGLVLEKT
DSQDRRRTKITLSKKGKDLSEKIERQYADVNEAIEQISAQATNNLWAAIE
EWEYLLGQKSLLSRVLEIKKRRESMDVKIVAYQPKYKEAFYKLNEEWISK
YFTMEKPDRDALENPESYILKKGGSIFVALLNGEPVGVCALIKREDLGCY
ELAKMAVSPKAQGKSIGFLLGQAIVEKAREMGEQRLFLESNTILKPAIRL
YEKLGFVKVVGPPTPYDRCNIQMELKL
>Bd1219 hypothetical protein predicted by Glimmer/Critica
MKTLNKFFHVKFEERRAANPRFSLRALAQRVEISPGHLSEIFNNKRPVSS
ANFNKLVAGLRLTEEDQQKAQSLYDSEKKRKKATHSIERVLSKSEFSEVS
SVDFFLVLAAMDLHTEEWDVELISSETGVPSERTQTVMNKLLQLGLVEMN
SPTTYVKTVRSLASESDIPNFDVQKLHKEALKRSTDIFPQVPTEKREMVY
LTMAVNPKNLDRAKKELEKAWKKVYGKLTQGECTEIYTLGMQLLPAVPKE
TE
>Bd3057 similar to transcriptional regulator (MarR family)
MAKLFIQDLPSREEVHTSLTTLPVAAEPDSMAVYSNLLFLKVASEIENSL
DSLLSKYNLSSGRFMLLFLLRNAPAGLRPSELANQVGVTQATISGLINSL
EKAELVVREGHQSDGRSFVIRLAPKGEQAIQDIFPQWYPRIVNFWNVVSN
EEKNSLNGLMEKMIQNKSALTPR
>Bd1722 putative transcriptional regulator
MMDKRLSKISFFDLMLLAELPDHKSLRSLSRSLGVEPPRLTKVLKSVGHQ
LQFEIIKTSSHGYIMTAEGSYVSLQAKELLKKSEDFIPRKSQFLAPSTTY
TVGGRGFMNVFFSGVMITSLESAGVKALLRFMDLSPEELRQTATEGVLDV
ALHLEEIKWPQTWSAAEVGAMSWNLYVGKNHQLKGTVSKEELLKFPFARS
AYWNGRAIAQAADNFPIPRNERIMGHEMQTALTAIEIVQHSNNVALIPNI
IARKYEEAGLIRSLKVRGLDLVESKIYLSVRSDKISQRLFKQWQTQLKGL
LKT
>Bd1847 hypothetical protein predicted by Glimmer/Critica
MSKFRLALGSASCRDNKSKDPQVQEVCRILLEKLEALKSSDPIFLKSFPL
DHSEIMEINGREVLMTVFHDRLPKEESLLVIQAYYSTWKFPNFISLSGVG
KVFAEGFLLNKTGEVKEAPESLLWDYR
>Bd3585 conserved hypothetical protein
MHIEFTQADSSHVEDLVELVNSAYRGDSSKQGWTTEADLLDGQRVDAKGI
QALIDKEESVILVAEDDDTGDLLGCVHVEKQGSKMYLGMLTVAPELQSKG
LGKLLLNESEALAQFWDCNTIFMTVISVRTELIKWYEKHGFRNTKETKPF
PYGDERFGIPKVEGLQFTVLEKKV
>Bd2497 conserved hypothetical protein with HTH domain
MRQKNMLADFLKQKRVSAGLSQRDVADKLGYSTPQFISNWERGVSHPPIN
ALKRLGELYKVSADDLFEVTLNATIHEVTQDLRRKFASSKAR
>Bd0569 two-component response regulator
MSTIFLLEDDPVIGKAVQLQLELENYKVEWVQTLADAKRQSAECKADLYL
LDINLPDGSGMDFCNWLRAQDQKNPVIFLTARTDEESVVQGFDQGANDYV
RKPFSQRELIARIRNQLADNKATLELVRFAGLTLIKNQQVLKNGEALINL
NRREFEILTTFFEHPETIVTREQLIERLASGEEIFDRTVDSHISHIRSKL
TKNGVTMVKINSVYGQGYRLEKAV
>Bd2786 hypothetical protein predicted by Glimmer/Critica
MSTKKGSDALEMMEAKYGRLSVAGLLISCRTSDELSQTQFAKKLGMSVQS
LCDLEKGRRIPSPGRAAKIAKKIGYPEIALVTLAVRDALYAEGFKYNVKL
ESA
>Bd3366 Conserved two-component system, regulatory protein
MEQHGKRLLLVEDDQGLREVLTEELQERGFQVKAYADMPSVAELSEIDWA
LLDLRVGSENGLELLKDLKTRHPQVKVVMMSGFGSVASAVKAMQLGAHNF
IAKPVTVEMILRAFSDQAENMELPEEEISLARMEREYIDYVLQSSEGNIT
QAAKKLGLHRQSLQRKLRKNIPRK
>Bd3675 transcriptional regulator
MEKGKKAAKATPKKTRNLEKSRKEILDAAFWEVFTRGFQGVSIDDIVKKT
SMTKGAFYHQFPTKLDLGYALVDEVIKPMTYARWIDPLKTYENPLEGILL
QLKNLIGKADPQELRYGCPLNNLVQEMAPVDAGFKERLQDALNYWIDGMD
QELKRAKKAGYLREDINTRQVAHFVVMAHEGFYGMLKGLEDPKAFNALYD
SLKRYFEILKA
>Bd1666 putative helicase/SNF2 family domain protein
MAFSGLSLQKISHLVSPKDLATLEQMPVAENAFRILKKMSLDSHNIQKKE
DGGLEIQFVYAEESSLRKSYVQVEEDGEGGELTFHCAQCAVSRKDKEDIC
VHEWASLILIWWALSVDRGFLRNHSFQVSNFCEDFWDLTETKKAHRGEGD
GKGLPDNLKLESISLVTETLSLDEDRALEEYLPEWNKVYELNRVPEGDDA
STGAVWGLPQAFRGSLQKETVYWADVRHQDQLAGLLRYNFNDGVQISSRD
ILRHAYRSVVPRDLLPGPARKETFEVYWPLLPSDPHRFFSRDLLDIEAVM
QELLSRITRRVNKGDLKFYLQDQKDLGKAFQVGNISVEAEDAFEWKVEFS
GSDEVKTSALLTAQKDQQKYIFFDNFAVDFTTGAVVAFAWKKESEALDQF
YSRQLKTDRPRAFSHLHVEGKGETAAFMKFLRGRSLPVRVQGGSHDMGAI
ASVLNLHHQDDAGFVPEKVFTLNEKETVSKMGFSTPVVLIMRTLQEGLGF
LLQTEVKTLASSSFKKREWDLKILKHLGVLQYLTLEALTYHFEGQLTDGT
TCDPANIFPALRSRVHSLLVTGDGTSLTKTLDLDELCSKGVLGIFADYVA
KVLKSVGEREAIYSSKGEYLFSGSVEREFRVLYEILKYMALSTQGSAFKR
ARTGFLTKTWDGKLEEDPMLEQGHFFMPSWGKEDVTPTQSLGLLQPLVDH
GIRLYVRGQLLQELGQNEFVVDFQIVSKLDEGMLNWFELNPRFFLQGKEI
DATQLKSMGSGGVVEYDGKFFLVPRKEIPSLRRLEGFWQKLQAGKKDSSK
KAWTDKYYQLPKHQALELLALRASGYAFRGDEEWKRICAFYDGLGTRTDL
VKLPGSVKAELKTYQHEGVQWLLDLFTLRMGALLADDMGLGKTLQALSFL
DLLRTREQLGQVLVVVPSSLVYNWESEVAKFTPELPFEIFTSKDHDRLGK
RLEAKEPLVVVTTYGLLMENDEFLSQYNWNVLIFDEAQNLKNITAKRTSS
ARMLNARFKMCLTGTPMENHFGEFYSLLDLVVPGCLGKYDDFRRHFVNTE
VVLLEDVEDLKLKTRPLIMRRTKKEILDQLPEKQETKVSIAFEDKQKQIY
RDIAIAYNQRIQDTIREAGESQSQLQMLTALLRLRQACSDPGALPEVKYE
KTPPKLEALMDSLQEIIESGESALVFTQFLQTLERTEKLLKAVGIPVFVL
HGAIPTKQRQKILKDFNETKGGAVLVMTLKTGGVGLNLTKASYVFHLEPW
WNPSVENQATDRAHRLGQRKAVQVFRYIMHESLEEKMELLKERKNRKFQS
LFSETEASTDLTGAGGALTKEDFDFLLGLK
>Bd3718 putative TetR-family transcriptional regulator
MRASLYFMAKTYHHGDLKTAAIKKTVEIIQKKGEADFTLREIAQSLKVSH
TAVYRHFKSKQDLLSHIAEEGFHNLNQAFSTEIAKARSPRQKLSALGRAY
IEFALSHSGHYRSMFHQELRCAKDQRPELEEVGLRSFSILVECLQEGMKS
QVFRKTDALIAARSVWSGIHGFSVLMIDGQFQSLQSRTSVAEAIEQHLAF
LERSLLK
>Bd0421 conserved hypothetical protein
MQQLYYELSVLAKAVNFKNLSAAALHVGLSQPQLSRIIAKIEDELKIVLL
DRSAKRKSGWTAVAFQLSEIFEKSIRRLETELQGISNNQMVGELHIGTLE
GLSDFALNTSRLCFEEVGVKKITLDIFDLNELEANFLSGNLDLIFTSKQP
GRQKFKYLMELGFQKLEHIESSKKFNVLSTFEYGRANKKELEHFPHVFVS
NSLSIRRSWFDKHGGTGHLPTEAKRGRAKDSEPVMMIGSELLNPMLWENI
ISAIEE
>Bd0429 two component response regulator
MEKKILLVDDNKDFALLFQAKFSHLGKIECASTFAEAMRLIHDQSWDLFF
LDHTLDEHTCFELIPAIRERSPRAFIMIVSGNADKEMAIRAVNSGVSGFL
EKPINESDLQNRLAAIGWYEAHISLDDKNRSIYVSGNSHSLTKVEYMILR
ILMDKKNQLVTRIELEENIWGGRHIVKNSLDTHLYNLKRKVPELKGRLSS
IHGTGYLLKI
>Bd1991 hypothetical protein predicted by Glimmer/Critica
MAKGHLQWTLSDISRESNVTRSLIYYYFGKEKDKVLEEAYKFVISHIFNM
ERTKTVGIRERLRDVLRDVKNMPYLFVLYYLEKNAGTQFGKMINEAEALL
MKAMKIEFPTLSEIQILEIYLKELGAIAFQLPPERVDDLFADYIKKN
>Bd3451 Conserved Two-component response regulator
MRKILLVEDDISLGETLNARLQRDYEVSWAKSLSEAWSLFSKTKDYDLAI
LDVGLPDGSGFELAAKLKATAPILFLFLTAQADAESRLQGFELGAEEYIP
KPFHLKELLIRVKHVLDAHAPTRELQLESCVVNFTQMSVTKKTGQIEYPP
VTDLKILQLLIEKSPRVLSRDEIMNEIWGVDKNPSHRTIDNIIVRLRQLL
GDDGEKHIRSVRGVGYQWSTEEAT
>Bd3315 hypothetical protein predicted by Glimmer/Critica
MEVLMKILASVFLGLLLASPVFGYEDDIETDLNEVYVINVTDEATTLDRD
YYYNFGRVGLFEERRATFFLRNNSGLPMYINDFDLSGPPAFDYAENCPQI
LFRGQQCRIRVFFQPRTVGLKRAELEIELTPQEDIVLNLRGRGVLRY
>Bd1163 transcriptional regulator
MVDQRFSVSVHIMTALAYHKGDLMTSEELGASIRTNPTVIRRLISKLVDA
GLLTSFKGKAGGVKLAKAPKEISLRDVYVAITDKKLIATPDKEPFKNCVV
SCSMKKLMCELVDGIENNSMDYLGGIRLSDLTSKIAK
>Bd1889 hypothetical protein predicted by Glimmer/Critica
MRASIAAFCLLAISSTSLASTVKVMDLGFNCEPSVSDVFCLEQAKKPNSG
YLNGKVKSATLVSNADFYNKSGDLINASPAIVVVTEKGKIVLTKESALRL
GMSMGDLLNEFSSPKSNIILRYNDESRILGLVLAIEKK
>Bd0668 conserved hypothetical protein
MTTPFHTHYLVSMDSRRFFLILVFLVVCQGHSTEAAGGIKFGFNSSNAPP
LLFQFENQNTPIPTGGLIYEVSVAIGEELGGDYSIVRIPRKRIATNIINN
KIDLICHNSVRWRHPFADGALWSKPLFTHTNVLVGLTTVPFVSPDQIKGT
IGTVENYVYADLEDRFKSKELQRSDSPTIEVSIKKLLTGRVPYILLSDIE
YTYFKSLYPSLQRSTFALDKTDIQCSLSKKSRLTLSRLNRAIDRLHEKQV
FSKIVKRYSDPETTPKPVSYGLNSNDSPPFIHFDKTSEVDGTVRGGVFFD
IALEIGKRIQRPINFVLLPRGRLDARLASGQIELVCYDTEAWAGQYAQQY
HWSTPIFRQSDFIVGHQADPKVAKIRTLEDLKGKRIGAVLNFVYPALTPY
FEDKSLEREDAGSGAANVEKLSVKRVPLILLNSLEYSYYKSKDSRLQKAP
LEIDPVDVKCAVSKKSTLKIEEINLAIQDLVKTGRMQKIFAPSYRH
>Bd3893 transcription-repair coupling factor
MKAESTHTRLESILERAFETTRGKIQVTGAASPLALAYFLSQTYSKKING
LPHLVVVGSHREAVTLQALLEFFDPSRQSHILPAFDVSPYSGLYPNTQVV
ADRVRFLAKAQSAKAGEIFISSVDALMQKTLPVKILKDHSKTVRAGDELP
ENLSDYFSSLGYTAAPMVEDKGQFAVRGGIVDIYPPTENQPVRMDLFGDQ
VESLRHFSVADQRSSDEIQSFVLTPAREVLYRDETHERLLQRVRASLEGR
KVDKAEAEETLRSLVLKNAFPGIEFLLPYFYGELATPADHFPGALNLWFL
DPVEISRCADEMWAELKADHRTSDAHVIRPELEDIYVNFEALAYPLNSRQ
VYFSSLEYFDEENSDDSRVEYRTAMTQDFTNLALANAVGTEQWLQAATNK
LHRWRDEGYRIFVSTKNQSHIDRLSLVFEKLELKAVRTSSDEYRWDSWLQ
EQDREQNIVHIVPRYLAESLRLEEEKIIFLRDEDFYGKKQRAKESSGAQD
FQKQAKRLSFGDLKPGDLVVHTKHGIGQYEGLKIMNISGVESEYIQVGYK
DKDKLYLPVYRVGQLQKFSGAGTSILDKLGGTAWEKTKAKVKSHVRDIAA
DLLTLYAKRAEMHRPAFVIKEDEVLMFENGFPYEETDDQLRAINDIRKDL
KSTKPMDRLVCGDVGFGKTEVAMRAAFFAIQARKQVAVLAPTTVLTFQHF
ETFKKRFEGWPVDIRVLNRFVTPAEVKKTLQDLKDGKVDLIVGTHKLLGS
SIAYKDLGLLIIDEEQKFGVTHKEKIKKIKTSVDTLTLSATPIPRTLNMA
LVGIRDLSLINTAPVDRLPTRTFVTKFDPETIRKAITAEISRGGQVYFIH
NRIESIYGLVDEIRQIVPEARIRVAHGQMEEHELEKAMLAFFHHEIDVLV
CTAIVESGMDVPRANTMFIDTAHLFGLSQLYQLRGRVGRSKTRAYCYLMM
PRNHKLDKEQQERLKIIQENTALGSGIKIAQYDLELRGSGNILGEEQSGH
VNSVGYEMYMDLLNEALAEAKGESVEDMDLDPELNLKIPALIPDAYIKDI
RIRLGYYKALADITSNEDLDRIEEELRDQFGPIPEQTVNLMGLMLIRRQC
KELGVRDISAGLKSISLIFTEKTKLSPEKVIQLAIRESKKYSLTPDNRLN
IKMSTITWSAVHEEIDALLRLI
>Bd0897 transcriptional regulator, LysR family
MQGIIAFVKIADSGSFSAAAQALGVSKSHISKTISLLESDLGVALFVRST
RKVQLTSVGERFLETCRQSLQNLDSAKKEILDLSNTPRGVLRVTLAGIFG
EEYIAPVVIDMAKRYPDLKIELDFSSRVVDLIEEKFDVAIRIGHLENSSL
LATKIASRVEYVVASKAYLSAAPSLKEPEDLANHNCIGERSSWSFRKRGK
SFHIPVKGNFKCNNPRVLQKAALTGLGIARLPGSYAFEDIKKGRLISLLE
NFSEGRKDIWAVTPIRHKQNINVKIFIQEVKKHLSDDYADVLF
>Bd0213 hypothetical protein predicted by Glimmer/Critica
MTEADVQSIALFFYFALLDDQKAIEASSQALALCRARKARNPDLKNSVAI
VAATKTVWDKFKVRVSRGRPNTTVESGWLIPDAVDLGPWREFQKSASEDE
LLTVIWSKILKISDDDISAGLGITEGTIRYRLGRALRKLGSMTQGVSKLK
HGSAGK
>Bd0335 Acetyltransferase
MTTEYEFKTITTTDTLPIRQRVLKPHLRAEECVNPGDDLPTTFHFGLFIS
GNLVSVATFIQESHPAFSAGYPYRLRGMATDDSYRGQGLGQKLVRFGVEE
LKSRRCDLVWFNARIKAFPFYERLGFSFYGPLFDIKDIGPHKTMYKHLIP
R
>Bd2905 transcriptional regulator, LysR family
MDRLTAIQVFLEVAKTGSFTKAADNLNMSRPMVTRYVGILEDWVGTSLLQ
RTTRNVSLTSSGEMYLEKCRQIQDIAFDIEVNSKSALDEPKGVIRVASSV
SFAMSQYRELIAPFMERYPQISIDFVVTDRQVNLIESKVDFAIRITNSLD
PGIVSKQLGVCHSCLVATPKYLKAKGTPRKVEDLRKHRLMAHDHFKNSKL
SLRKGDRQEELSFTSAFSSNETLLLLEAATQDLGITMMPRYLVQDHLKSK
RLVEVLSDWSLPEFGLHIVFTNRKFIAPQVRLFIDYLSAEIKKQNW
>Bd3229 transcriptional regulator, LysR family
MRTLEGELGFKIFSRDQYRPTLTPQGRAFLKKADDLILQFTELGETAELL
KRGHEPIIRLAVSALWPLPNLVSALKEFSSRFPQTEIKIIHDVLSADEHL
LEDHADISLGTIFNDKGLLITEELFTVNMVMVCSAKHPLAKLKKTTTEDL
KKYPQIVLSSTVKSSNRSGGVVNPANTISVQDLQTKKAFLEGGLGYGRMP
DFAVKEEIKQKSLVTLGQKAIPLHASIGRHSAKELGPCGKFLWDYFSRGQ
GKKLK
>Bd0646 transcriptional regulator, MarR family
MLTVLGDPMAKLFLTEIPPRETIQEEARTMFPQVNPESWYSHILLRKVTT
EFEINLDKFFSQYNLSSGRFTLMILLNKYVDGLMPSELAQMVGVTQATIS
GLINSLEKVEVVQRTTHEKDGRSYVIKLTEKGKKMTGEILPEYQTRINKF
WSEFPSEEKTQINGYFERLIKQMKEIGQKPTAE
>Bd0687 hypothetical protein predicted by Glimmer/Critica
MNKILIIRGPAHNCVLMQDVNKNSDFRQFLEDELARRSQNYPRYSLRAFA
RHLEVDSSFLSKILNGKRTVTMRTIRMFGERLNLNSEELQRFGEISREKK
MKRKLERLLEKMPSEEREHSTITINVDEARLDEAKEKIKGFRRELAQFLD
NGVVQGKTYQISVSLIPVASYAAE
>Bd0954 
MDQALQSYLARIAPTVSAKSAQAVIELAAEGATVPFIARYRKEKTGNLDE
VQIRAVIEGHETYNEIVKRKAFLIKEIGEQNNLTAEIQKRIELSWDLGEL
EEIYKPFKKKKKTKATIAREAGLEPLANWIWDMGHGTIKDDQTMEMKAKN
FLNPTAKIATYEEALKGAQDIIVEKIANDAELRAMVAKNYNDSGRVVAKA
AKGYKANSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQEEELTVDVKG
DDEAILKSYENFATSTPDNAIGDYLKQCARLALNVYVLPSVVNEVHRQLK
EKADQDAITVFAENVRKLLLASPYGPKCVLGVDPGLRTGCKVALIDKSGA
FISHTVLYTLGDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLK
KVLKDLGKNIPVVMVSESGASVYSASEVAREEFPDLDVTVKGAISIARRL
QDPLAELVKVDPKSIGVGQYQHDVNQSQLKKSLEAVVESCVNNVGVDVNT
ASAALLSHVAGIGPALAKGIVEARKKSLFNDRTELLKVPKFSAKVFEQAA
GFLRIPQSKQVLDSTGIHPERYQAVTDMAKDLGVSLTDVIGEGAKKLVSQ
RSKWAQLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDIMEVKDLTEGM
ICPGIVTNVTNFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVT
VKVLKVDVVKNQISLTMKMDDAPEASAPRGERRPENRGASRPMGQGQRPP
AGKPAQAPMKPANPFNNPFAALMNVPTNKK
>Bd1714 putative RNA polymerase ECF-type sigma factor
MRCFPKKLSVPSGNMNDLSDEDLLIKLAEGERKALDILYLRHSGRVLSYA
LKRRLSQERAEDLLQIVFLQIYRKKHLYDPKHSALAWIYVITRSELKDYR
NREIKDFLEWDDSLSQTSESSPILEQKDEAEALLQDLKPREQEILRLRYL
DEMEYNEIAALLQESESNIRQIVSRSLKFLRGQKPKGVSK
>Bd2155 putative transcriptional regulator
MGAAPQTHTSPEKKYMLKIPVQKRSKETVASIVESCARLLVQEPYHAITT
DKIAEMAGVSIGSLYQFFANKEAIVAAVIDDLLQKDLAYIEEKLAHLQTP
DLDAKIHAFIDIGFTRFHDNRPLRTALQGVQGMLDYWETRRVFFEHYQKA
VLAHMPVYQGRDRDMMALFVVSCFNNILQLGLLGPQTVEREEAIKKEVFT
LFSRYLKP
>Bd0908 DNA-binding protein
MRKADQKTTASTATAEINKLRDLSESVGDFIRYWGFRRIHGQIWTQVFLS
KTSLSGAELTQRLGVSKALISPALSELEAYGLILMTEDGKKTKRYSAAPN
VIPVIKDILKEREAKIIAATQEKFGTLHKIHEKRGEQESLLQHDRVEELG
QMITLAQFALNFIIGQSDEESLACWTEEALKAEK
>Bd2139 two-component response regulator
MSLEKVLIIDDHPIVRAGLKTEVERLSDAFTVVGEAEDAAHALQMIQAEN
PSVVLLDHLLRGSSGFEVLDFIRKFNASIRVMVFTQSLESAILKTYWNSP
VVAIVSKGSLLEDVPKALLALKRGERFLSANIREAIDKAGVEVLTKREIE
VARMIATGRSNKEIAEVLGCSDQTIKTHKTNIMTKLGVNTSVEVAMWVTK
QGLS
>Bd1706 transcriptional regulator
MKSKTAKLRRAQLDRQFYAAQGIGALKTPKTGWVREIRTALGMSMNDLAT
RLGVIKQRIEGLEKNEAAGTVTLESLRKAAEAMNCEFVYYFVPKQGLQKT
LEAQALKVADEIVKSSEHSMSLELQATSKSAQKALTEEIAQELLRNEDRR
IWSRKK
>Bd3013 putative sigma factor regulation protein
MSIKIKFLVITSLLLLLSSATIFWINRTSFLDDKRSYLYSSALERIQDAT
EVINGGSNKVMERLQTALLFFDGSVFSPQIKTAAQQQGWGNIQIYRTIEG
NATFLDALSESPSLPAAQLQYLQKMPEGKVQTDVNLDRPENMIVYYRKGD
LLIYGQLTFEGLKDANQKNTLGFWHPQKKQWKVPVGLANVSEAHGPITAQ
LTGQGSSVREIQLNGNDYLVSYTWIPQLQAYMFQVFDKGQIYSVLQQTMN
KTLLASALIIVLGLIATFFSVDSLTQSISALAGGMSLFASTGQSKPIQLK
TNDEVGRMAKVFNSMLEKIQGLLRQTEEKARMEAELETAKEVQTVLLPKP
KVDTDHFTLKGFYQPASECGGDLWFHFNDDKRLFVFIADATGHGVPAALI
TAAARSVLSLSMAENMWDPSKVLSMMNQVLCDLAKGEKMMTAFAALYDRE
AGTLTYSNASHDFPMISPLPPEGKKIKKNDLVFLTDANSKRLGESRESQF
HTATVPLMPGGVFFAYTDGLIDAVNGTGTAYGERAVIKTAVDCTNRGSSK
SLHDIMQKQIVEYIENQEQPDDITFLGLYIKQT
>Bd0621 putative response regulator
MKILIVDDEALVRRSLSRALKGKGHEVLEAGDGNEGLQLWQTSNPDLVFL
DVLMPGRTGPEVLKEMRDQSKAKVILMSAFAGEHNMETAQQMGANLFVPK
PFEDIFAVVKMAEDL
>Bd3683 conserved hypothetical protein
MAKSKSLEACPVYKTAMILDGKWTILIFRDLLANKVVRFNELRRSLGSIS
PKTLTERLTELEDQGLVSRKVYAEVPPRVEYSLTEKGKGLSAVFDSMAKF
GDKWLR
>Bd1425 transcriptional regulator
MDYIRHIFKALRVSSSQFEKDLGLSAAQIFVMKKLKEEPGLSINDLALRT
TTHQSSVSVVVKKLEEQGLVSRMISKEDSRKVVVSLTPSGLEKLSEIPRT
VQEHMIETLQNMPPEKTASLAELMREFVTEAGIVESVPAPMFGEDSGR
>Bd1891 NtrC family transcriptional regulator
MESVVGSLLWLAGSADNKNMSKSHELLKFIGDSAQIFFEQQAGESLISRI
LDLCIQATGADRGTIFFDSQINLEQHFKYLNSYIATGIRNQTIVINTDQG
IAGKVFRTRKSYFSNCVAQDKDFYLGVDSKTGYQTEKVLAVPLHWKDGKV
IGVIEVLNKADGDFDETDQHALEALSMLAAVAFENYEVHQKNEESESAIE
HRKNIWRKSISSVSLHSKAPELQKIYDHIGDFGKSDSNILITGESGVGKE
VIARLAHHHSSRRDGPFIAINCAAIPESLFEAELFGVVKGAATGTVARQG
QIELAHRGTLFLDEIGEMPVEMQAKLLRVLQERKVQRLGSTESPKAVDFR
LICATNKHIEAQIQQEKFREDLFYRINVVNLQIPSLRDRKGDIPELAQAI
LEQLHNKRGWKLKRISPEALDRLIDYHWPGNIRELENKIESACLSAGDRA
VLLPDDFQFKARPQLSVVPDAQEDSLKRFENLSLREAREAFEAEFVQRAI
QGSLGNKSEAARRLGVSREGLRKILIKKPA
>Bd1098 putative regulatory protein
MTQDRRLPNLRLAFWTGLKTMKCPFCGHADDRVLDTRVQKDGSIRRRREC
LECKARFSTVETIMLAFPFIIKKDGRREPFSKEKILKGLQASCQKRPVSL
AQIDAVVEKISAWVINRGESEISSRLIGKKVMAELKQLDDVAYIRFASVY
RTFKDVQEFVETLEDAELLDFVDASNPQLSLTAMTFVESEKSTNHETDSK
TPSPRTRPPGPLSN
>Bd3060 putative transcriptional regulator
MSDTSQLKTVQDESADGQKGKKRDRSASEERLISAGIEIFSKHGYDGSTT
KLIAKKADVNESLIGRYFDGKEGLLLTIVERFIEEVRTEELAYPPQDTLA
AELSKYVDFKVGKSHDRDCLGKIIICQCLTDNKFRKKALERIPMFADPKL
IERLERLQKMGQIKESVTLEEIAEEIETYLHGAFLFDLILSETPQEIVTK
NALRFISHYTAGIGKS
>Bd0724 hypothetical protein predicted by Glimmer/Critica
MTVQQFMQLQLKKRQEKNPKFSLRSFARLLKTDPSSLSKVLNGLRIPSDE
TVEKWVDCMKLTPEETEQLKGVVNGANSFNPLNSEFFESTYSWVHPILLE
TLKLPNATRNMSALADLFGMTEEQIQKTIEYLESHKILHRSTDNGNYLPS
NLTTVTIPYTTELRRGLQKKYLEMAQKALEEVPMEKRDNSTLTVAIHTDD
IPAIKDIIREARHRIHRLAEKRRHQLNAVYNFSSALYPVKEEIL
>Bd1809 conserved hypothetical protein
MKYFNKLGTTGKVILGVVLLLVVARAFLPAGMKYGINWYLGNKMENYEGR
IDDFDLTLYRGAYQIEGLKIWKKGANPEQPLISAEQLDLSIAWRALLKKE
FLGDLSVQRAKIVLSDSKDEKKEDLGQGQDWRAVFKKLIPLRLESVKVAD
SSFNFVNRDFKVPVDVRLDRIEGRVDNIRNTDENKDPLPTRASVVARMQG
HADVKGQARLNLLSKVPTFDTDAQLQNLKLETLNEFFIAYGPFTFNRGQF
SLYMESVSRDGRIKGYAKPFIKDLDVIDDKESFKSMGQAFNEVGLALVNL
ILRDGDSKSLGARIEFEGASKAPSIDKWGAFWSSVQNGFFESIHQSLEHS
ISPKDLKKEKSP
>Bd3621 transcriptional regulator, LysR family
MFNYNHLYYFYVTARLGGVSNAAKYLHISQPSLSSQIKVLESSIDQKLFE
KRGRNLHLTPEGERTFAYCKKMFDVAADFAESLKSPTEKQSQRIRIGVSD
QVERPFIADLLAPLIREQRRAVEKTFFVSSAPSDALLTQLRSREIDLLLT
NKPIYADDVTELATAEMPVNLMVSTKNLKERKMRISRNTSAVDFLAAVPW
GLIIPSYKMKLRHETDLFFQDIRARKKVVFESDIISVVGRAIVDGAGVGF
LPVPYVMDEVSSGILTLLGPKAGYWKHTLYLLGRKDEKEDETIQDLKKTI
KRLEKI
>Bd3688 conserved hypothetical protein
MDKNQLDGLLALKLVAEKRNFTAAAEELGISPPAISKMIKQLEKRLGVAL
LTRTTRSTSLTEAGIRFLGQAGPGLEQILSAITSVGSYADKPSGVLRINL
PRATYQPYIEPLLASFAKKYPDITVDLYFSDQTEDVVQSGFDAGIRHSDI
LAQDMVAVRISGPIRFVVVGSKKYLDKMGRPKTPKDLLLHNCLKFRFGSS
SVYDRWEFEHNGRDFQVHVKGSVIMNDPLLLVDAAVGGMGLTYVLEDTVK
DYLKSGKLEVVLNQFAPSSAGYFLYYPKRSQVQPKLRAFIGHIKEHLNVR
>Bd3720 hypothetical protein predicted by Glimmer/Critica
MATVVKKPLIQEYHDYLEFLIDWIDYLKVREKGFSLRQVAKEAGMASGYL
PMCFSRKRKLSKRSFVKLLPHLMLTPKEARYLELLQVIAESEDPKDRVKA
LTELQRLKDYRESHQLELEVHQYLSRWYYVAIRELVNTADFKEDPAWIQD
RLRGRISQKEIEEALAFLVQFKFIEKNADGKYLVVQKQLDCHEGVFKISL
GEFHRQMLDWAKVSIEEVPRADRLLLGHTTAITRDQFELVQGILKKALND
LERVENSTVQKGMEVYHIELTAFPLTQNSSVKDGSVGE
>Bd1267 hypothetical protein
MKQHPEEFQAYFQTHFNKWGLTKTESEVGGLILLGLSLREIADRRGTSET
TTRQQALSLYKKASVEGRHQLSAYFLENLLAAQTSAKPFVQSGSGAL
>Bd3521 transcriptional reguator, TetR family
MKTKERILVTSIELFNRSGVVAITTNHIAKAMDISPGNLYFHYDNKEEIL
IELFKRMAKETYDVWRPSRAKKSTPLVFISDNFELYWRYRFFHREMYALR
RRDQQLAKMWRNHIQKMMKLMVILYRQWVKDGKMVKIAEVSEMQYIAESL
LAMATTFLQFFESAEKQPGKRSIERGKRHVARLLLPYTSGETKNEFEKFL
KS
>Bd1021 putative fibronectin/fibrinogen-binding protein
MKALTQQELQHFVSYFAPILDGAQLQDVLVNDRGLALGFHLRGTMYWMIL
DLVPNTPMLLLFEDQCPFKKGPKTKPVSLFLNSHGRNLYVTSMAVQEAFG
RVVRLQLKNATMDCELEIRLIPKQCNLIVKAHGKQVAWDRPLDLSAAPVV
ENPPEPRDLAAIHEEWLAEQSGGKKPTNLDPVAQWEKQKQKDLEKKRKAL
SEIQKQIESDRELLWYEAGQYLKTHGTLEVPEDLQSCVDRRQSLSWNIEH
CFSKAKQMVGKKEGARERLDELLIEIQKLEATRYSQKQSKPALVDLMKKA
EARGRKLHLASGALAYCGKSGADNLALLRQAKAWDYWLHLKDYPGAHAII
HRQRDQEITPAEVQEVAAWVARESLSSKSLMVGQKVAVVIVECRFVRPIK
GDKLGRVTYHSEKSFQLTLN
>Bd0248 conserved hypothetical protein
MRLGNGPTDCFASPQQDYWRQDSVRTFRMKIRRTSMSNSKSGATSKASRK
NQTTIPARVRQALGIAKGDTLLWTVNGDEVNIRIINRKQVDWTKTSELSL
LEWTAETEKSNEPEAGL
>Bd1279 hypothetical protein predicted by Glimmer/Critica
MKLKIRCPSCAKLYEVESDDIQTESPLFQCISCEGRFSFEYPPQDPANVI
CFAVSLEAEEASLAESAPELEKSELVLAAKRQEDHAIEPGAQEMKGCPKC
GALNGRRAKECYSCHVIFEKLEGLPKDPSLKAQPSLVRKWKNLVENFDNE
SLHDEFIRSCHELDALRFAILKYEDLKTAQGGDPQCDQMIARINSLMMVG
LSQKPTAKDQAMKPKWNKYMYWGPFGLSALLILLGMINLGHRNLIGVGVA
LACMAAGLIVMIKGKISASDFLD
>Bd1838 acetyltransferase
MKLRPLELTDLPLVKAFTDSTIGLGYFSENELQDCYQKSQSQGIMCSFVL
IDDQNHIKGFRLAYPPGAWSKGKGSKLHPELWKVPLERAAYFQSLFIAPE
VQGGGWGPKLSDAALECFRKLGAKAVITHAWKESPNNSSIRYLTKYGFTS
VATHPNYWIDVDYTCVRDGKPCRCTAEEMIKYL
>Bd0184 hypothetical protein with transcriptional regulator domain
MNKINRKLEYALMALKYMSQKIPGELTTAKEVSDSFHTPFDATARVMQQM
AQKGGILRAEYGANGGYQITKDLAKVSIHDLVEVIEGPTALVKCLHKEAP
CEIQGTCNIVSPITALNDRLTDFYKSLSLKELLVERMAMPAKKSSEAVAH
G
>Bd0247 hypothetical protein predicted by Glimmer/Critica
MNMDQISQHTDAKKLLKSLQEVLKSKKITYADLALQMEVSEVTVKRLFST
QNCNLQTVFRICDLVGISFFDLAALANQDKEVDYVLSEDQEKFFATNPAM
FGIFRALHRGVSPDKLAEVWKLSSQKMFKVLRKIEQFGLLEVLPKNQVRI
KAVGNIRFQHKGPLARAILRPQIMQFLDHVDVVLKNKDVCMHSAEVELSK
KSITELVEEIHALGAKYRARALRDKNLLSADQLQSVRWLFAFAPFETNWQ
QYELKD
>Bd2575 putative 2-component transcriptional regulator
MDLAESGSAAESYMAQGDYDLVILDVMLPDQSGIDTARHIRRDGYEGPIL
MLTALSTTKDKVHGLDAGADDYLTKPYSFDELHARVRALLRRKAPSQGGA
TSNILKYADLELDLIQRKARRNSQEISLTSKEFALLEYFMRNPERPLGRV
SIAEHVWDIHFDSESNVIDVYINLLRKKIDVPFPKRLIHTVVGTGYVLKE
NL
>Bd1664 hypothetical protein predicted by Glimmer/Critica
MTSLQTDKYFIRESMFNLVELSLLARLYEAHCTPSASSGKISPESLAQTL
LKMKATEKNGQLRVAIFETDPVGFYWNYEGKVLAHWVHPDHRGHGVEQNL
LGGA
>Bd3666 conserved hypothetical protein
MQDPLSLTFAALADPTRRAMLAQLSKGEANVSDLAKPFLKEMSLPAVTKH
LKVLEKAGLITKSKEAQWRPCKLNGDGLKDVADWMEQYRVFWEESLDRLD
AYLKTVTVKEKPKGKKHGRKK
>Bd2551 hypothetical protein predicted by Glimmer/Critica
MTSPDGLSIKDVMSPHLILKRIIKEKQAHNPRVSLRRIAARMGISSGRLS
EILSEKRPLTAYYADKFCAALNLPESDISALKRSLAAPTDKQTFGPVLEE
HVVEKLADWKPYALLSFFQTTIYASLRHQHDTRESQIQEISKRLNLTTRE
LTVLLDAMTQTGLIEWDNSAWRPTHNEATTGYDIPSHARMQGLIADLHLA
QEKIKNISVHERDFSSMTLTMDPKDIHKAKKLIRDFRRNFVRVMEKGSKK
SVHQISIQFFPIVSSDDPSKESL
>Bd3596 conserved hypothetical protein
MHENRTVQTKNGDSIILRPALVTEAEDLLNAFKEILPTSPYILSTVESAA
TKTVETQVKWITAANEDPRSALIIAEHQGRIVGITNMAAFKDSKRSHRAG
LGMSVHHDYRGRGLGEALLRRLIEVAQTLEGLRFLELNVMSANKVAHRLY
LKLGFKQIGYQELAYRQPDGTFTDDICMCLDLTARP
>Bd2774 hypothetical protein predicted by Glimmer/Critica
MYPYMDLSLLLQDEFEKRRRKNPRYSLRAFANSLNIDAGSLARVMSGQRV
VKDATARQLMTGLQIPNEHQILVLSHLEASRRKKKEQDEMSFLATSSIEE
AVDKLNIYILISLESGPFCQKENFPQLAQLLNISIEELQKRLLELERLGL
LSATDTHMVCASSSISNMTLPLNPEDLPRVRDILKNARKRINVLTSRSKG
DKVLFNICTAAFPV
>Bd1370 RNA helicase
MVFSLLTPKCAKFELSQTVTDSRRADRGLSAILVSFQSEIGYSQPSLYPG
ARMNTFADFELLPSLLKTLKTLKISKPTDIQKQAIPLIMSHQAVVGVSET
GSGKTLAYVLPILNYLKSLEESGDPVKEENAPRAVVMVPSRELGEQVAKV
FKSMTHDTRLRVRPALGGMSLEQARRNTSGAFEVLLATPGRLVQMLNKDL
ISLRDVRFLIFDEADQMLDQGFLPDTNRIVDCCPEDVNLALFSATVSKTV
EKLMNDLFAKAEVIRSKNSGKVVSTLKTKNLTVEDGKRWPLFEKVLAQKV
DGGTIVFANTREQCDKIAKELTDKGHACVVYRGEMDKNERRTNLKKFRDG
QVGLLVATDLAGRGLDVSNIARVINYHLPKEMENYLHRAGRTARAGRPGL
VVNLVTERDSRLIAALEGNKPPSLEKKTQHQGKPRVASKTRFTDAKGKAG
YAKSMGVKKR
>Bd1172 hypothetical protein predicted by Glimmer/Critica
METQSNKHTNDAITLLKDELARRKERNSNYSLRAFAQSLSISPAQLSQLL
SGKRNFTTEVLGTISRGLHLSPEEERSLLTRTLLEKAQTPPQERAKRQLQ
EDEFRLISEWYHFAILSLGKIRGAKADPHWISDRLGISVSDARAALERLR
RMDIIEDGKALKQKSAPLNVVSEVPSRAIQSYHQSVLELALTKMPQTPLD
KRDFSAMTFAADPAKIPQARKMVEEFQDQLAEFLQTPNSKEIFIIACQLF
SLERTQS
>Bd0013 putative transcriptional regulator
MKNWLTIGQFAKASGLSPRALRIYEDMNLLVPPHRGDNGYRYYQESQLSE
AARLKEFKDLGFLLEEVKALLRADRDLDKSSLVNSLSRRLDLVREQSDQL
QDQRRQIEQLLSSLKNNIKPIAADERRAIMSYQGNPAIVVTGIQGLQKTA
EYIQKHLQNRNIPLLFWSEELELPESYILVLPEDNLGDKGVENLAPNVIV
LNSVSGSDDAIQEKYLRLYNFVGSHVTTVIHAEDQALLDIVSNERIRDTY
YQYYSKNRALEKQIKKIGGLVCSGSEISLYGYNLQKETVHLKLESRLGFT
DELALLSSITAVMKLGLPTESLCLK
>Bd1640 transcriptional regulator
MSNPSLEADSSELSLGDHHIDFVEETEKATSVPVTAATPISIPAMLCDEK
LLEEINAIPDKMGFKIGDVAEILGIKQYVLRYWETEFEVLRPKKASNNQR
MYTRKDVENALLIRKLLHRDRFSIEGARNAMKELKAHVRKEKDMTQVYHK
LEGINEAVEDLILDIRRVRQIFK
>Bd1885 hypothetical protein predicted by Glimmer/Critica
MTKKHHYRDFILKELERRQRKNPSYSLRAFSRDLEVPCSRLSEILNGKVG
LSESRAVNLATKLNLSPSEREFFVDLALSEHARSAVLREMALQRVNAREE
VFEKIGEDQFAVISDWYYTAITQILKLKDFDPTIQNIAQRLGLLTDVTEK
ALERLEAMKLIEKTADGKWTSNDAKYSSSYGGSSEAARNYFMQMQTKATE
AMSADNKRRWDMGCTMVPTSREKAKEIAGKIRQFRLEVMQELQNSENKDS
LFALSTSFFEMTDVQPH
>Bd0233 two-component response regulator
MHFTFVGLMLLNMNMFTTSTPLRGTDLAAKKIVIVDDYEESCKLLAEILS
STYECSYTSDSTSAFRLINEKRPDLILLDYKMPGVMGVDVCRMVRESDST
KNTPIIFVSGAATIDERIKAFETGADDFISKPFHVKELILRIKARLSEKE
PEAASELNAANMKMNLLSRQVFVDGEEVNLTPKQFDILKLLVAGKNNLVT
REKCLSEIWGDTEVTSRNVDSQINYLKRKIHKFNGRIVAVPSLGYRLEAQ
E
>Bd0299 two-component response regulator
MAAPQEEKSRLLIVEDDSDIRELLKHFLKEFVDEIVEAEDGSAALQFVKA
QEFDTILSDIEMPHMNGLKFLAYVRSLGQMTPFVVLTAHGDHSRALEALS
LGAFDFITKDSKRKVVIESVCAALKFGREMKSSKNDAVRSSHLRKIYADM
SKSSEMRLRKIIEEMSS
>Bd3490 Two-component system response regulator
MLDNLNVLAIDDDLNYLRSLKTALSGQYNVLTANGLASAQDVLNTSPVFA
ILLDLDLGTETGTSLLRVLNENPSRAPVIVISGHVNIANAVELLNLQIFG
FLEKPARLADILSILEKCRKQRIQSEVLREPQFTLHISKRLVEYNDEQLT
LTQTQTDIVCLFLNKKGLPIQREELIKSIWGDRHVSRNALDTHLLNIKNK
LPPFRDGLKLIHGMGYCYEG
>Bd3712 putative LysR-family transcriptional regulator
MSLLSPSLEAFWAVVQKGTVLEAAKMVNLTQTGVTQRIRSLEKQLGVTLF
TRSRKGMRLTQEGESLLRYVQVARDLEGDTLSKISGKKESSFFEVCISGT
STLMRSRIIPKASLVMKKNPKLRVRFDITDTDSVLGKLKTGFAQIGALPA
NQVGLELDSKTLAPERYVLVGTSAWKKRTLDDILANEPIIDFDPQDTVTL
DLLKKYKLAGKAQKLRNYANNIDALTYMLQQGLGYSTLTEEFARPYIKDG
SLCLLASDLHLDYSVALAWYPRTEMPPYFKQLVESLTKKT
>Bd2154 two-component response regulator homolog
MKGGFRRVWHGRRWRVDGQNDLRHFANLGTKLGLCVKDQDKRVLYQNENS
INTCGNMLGEQCTKTCMTLYKKIEECSAISEGMKLFKATEIEGHKVDALI
VNDGDKITTMLYPLDESEEKFQKQEVYFREKGLTKSEIRIMQMVLQGMTN
ANIAEKLFISKATLKTHLNNIYKKLPESMRPSQVRN
>Bd1127 LysR-family regulatory protein
MSEPNIYHLKYFSKAAELQSLAAAAKALNVSQPAISQAIRKLEDTLGCEL
LLHTKNRFKLTEEGRLLLERSRGILSQLEDLKAELKGRSEIVTGSLSIAT
SSAVAHYLLPPRLKDFMKAHVEVQPEIHFGTVPEIAELVRGGKADFGIII
EENRLPGFENRLLGEGGFTCVIRTGAQWPAAPRFLATQESPGWSELQKAW
RRHTGTDARAALTVENWEVISQMSLLGMGVGFVPDFIAENQSGLKAAEEQ
NIWAGKIRYKIYLIHLGEHQLAKPARVFVKSLVQQGF
>Bd0801 hypothetical protein predicted by Glimmer/Critica
MLDNNIQQLDWNKESLRDLRLRLGWSRSDLARRLHCSIGDIEAWEEGRRS
VESSIRGDLEIILRQAEACSDEVKYTPAAENELDKNALEQIDFTRVKAEL
K
>Bd2071 transcriptional regulator, TetR family
MDTRTRALDLGRHYLQTLGFNGFSFQTVADALGIRKASLHYYFASKEDLG
MALIEEYQKSYADWAVKREHLSAEEKMEQLIQMFVKIGADHKICPGGVLC
ADFGSVSNPMKKKLLQFHLGQKAWLVRTLKQGIQEKTFRKNLPVEETADL
IQASIQGGLQVARIRGEMKSFKTLGKTLIQNLKA
>Bd1826 putative transcriptional regulator, LuxR family
MLRDVLIQKGLSNREAEVAELVSKGLSNKEVANQLFVTEKTVKFHLTNIY
KKMNVKSRAQLIVWCLPHLGFVETEVRAENNNQAAAATAFNNNATQTIPA
GSATVAGTTTLPGSGLNRGGNSDIGMGGI
>Bd2785 cobB, putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase
MDLRLFKNIVILTGAGISAESGIRTFRDQDGLWEDHRIEDVATPEAFARN
PALVQRFYNLRRAQLRDPNLAPNPAHQALVDLENLWEGNFLLVTQNVDNL
HRRAGSKNLLHMHGRLDRVFCLHCDEHFEWLLDLAVDQPCPHCGRKGGVR
PDIVWFGEMPHHMEEIYEALDKADYFISIGTSGNVYPAAGFVRLAWKAKK
IEINLKDTEISPAFDEHFVGPASTEVPRFITQFLE
>Bd1394 dbpA, ATP-dependent RNA helicase
MPQKSLSGYLNLGSVIFSYFHSGLDFKSPPCYLSVFHFFRGVPVSQNEFS
TLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAA
FSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAM
TGGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEAD
KMLDMGFADEIKTVMRDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQVI
IEDEEQNLIEQLVYDSEDNDKTNVLMRILQQHPSDSTIIFCNTKNAVAEI
AERLNDLGAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDVAARGLDI
DNLELVINFDLPLSPEIYVHRIGRTGRAGKTGVAVTIAHPKDTLKLGQFE
ELTGGKFARPSLGFKNQYGLNKTLKEAPMKTISISGGRKDKLRPGDILGA
LTGAAGGLTSADVGKIEIQDKISFVAVSAKVADGAMQKLRDGRIKGQKFQ
VKFVK
>Bd1412 deaD, ATP-dependent RNA helicase
MAHLFEVGLDLPQAVRYQCTYGVFYLRPLPIPERSLMTPLTTVDNFESFG
LSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFG
IPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGG
ASYRTQIDGIKRGAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEML
SMGFKEALETILSATQPDDSDSVRAACRTWLFSATMSSEVRRLTSTYLEN
PETVSVNKVGGTADTIEQVYYTVKNSYKTEVIGRLLQTLPEFYGIIFCQT
KMEVAELADVLTQRGFPADSLHGDKSQQEREATLKKFKQRQVKVIVATDV
AARGLDIKDLTHVVNHSLPWDSESYVHRIGRTGRNGQKGTAITLVNPEQL
TLLRRVMQNTKAVLTKGVIPSADEVAGLKIKDVMDKVTSMDPEAVQLQLA
SDLIQDLIQAEDINFKELSKEELLARFIAAYFPNVFVKKDLMLDYMGDRV
PRELLPRDPNDNRFTRGGRGNDRRDDRDDYRARRPFGGGRGASAPARGFR
SEGARAEFSGGEQRAERTERPAFRDRPERTERPERAERPERSERAERAER
SERSYRASASSDRPARAERSERSERPQRAETDRPERRGDHPGIKRFRGPK
RQFREQ
>Bd0537 flgM, FlgM, negative regulator of flagellin synthesis
MKITHNKVGQNLNLTDSSRADNAAGIKGKADNIGAAKADVLTSSNLGESS
RVELSPRAQEAKRIKELALATPDVDEAKVAKFRALIDEGKYKVDAKAIAD
KMVDEHLEF
>Bd3318 fliA, RNA polymerase sigma factor for flagellar operon
MGKNAALLKKYKEEPRKLAPTQKDDLIREYAPLIKFIAQKIAVRLPSNIE
LDDLISAGVIGLMDAIEKYDSTRDNKFKTYAEFRIRGAILDELRAQDWVP
RSIRDKAKLLDKTMVQLEADLGRTPSDEEVAKALNVSIDEFHDLVNQVRP
VSLLPIDQATSFSNTDKKSIMDILEGSRTNSPFNQLNVKNIKEVVAQAIE
ELPERQRLVLSLYYYEDLNLKEIGQVLRVTESRVSQLHAQAVARLRAKLA
ATIGAGELEIA
>Bd1223 glk, glucokinase
MKKKTYTIGLDLGGTKLAAALLSDTGEMLDFIKVPVDMNREKSAPKAQKR
LIQLMTDIALDFKKRFPNETKASVFRGIGLASAGPLNAETGTLMNPANYP
GWKIVPILDLLTKEIHKTWKTPVFFQHDATAAALAEGWVGGAQKMKSFAI
VTIGTGVGTGVIFNGLPGQSDGMGSEYGHIVVDYQRLMKNPEKIDHCTVE
GIASGTGLLRRAREMGFTGNSVEELIAANDAKYQVLFKEMAWALAILCYN
LSIGYNLEKIFLSGGLIKIRNMYLKDLKDHYKKMIRQSKTVFECPIEVAK
TQNHAGVIGAGFLPHLYGKK
>Bd2201 greA, transcription elongation factor GreA
MAIATPDKLPMTIRGKALLDAELKKLLLEERPSVILAIEEARAQGDISEN
AEYEAAKERQAMIEGRIAEIQGKLAGADVIDTAQIKADRIVFGAFVKIVD
TESEETFQYQIVGVDEADVKKGMISILSPLARALIGKKDSDTVTVQSPKG
DKEFEIISFEYK
>Bd1119 greB, 
MGDGIMESKSNSRWTGLEDGLESCGMDNNKNYITPEGLAKLKAEYHALMH
VERPKLVEVVAWAASNGDRSENADYQYGKRRLREIDRRVHFLTKRIEDAE
LVDPKQMKGTTVLFSATVTLVNEDGDEVVYQIVGEDEFDPKAGKISWKSP
VARALLGKKLGDEVRIIKPAGEEFVTIENVEFK
>Bd1759 kdpE, two-component response regulator KdpE
MKENLKKVLVIDDEASIRKLLRVSLEANAYQVEEAPSGRDGLAAAASLRP
DLVLLDLGLPDMTGLHVLSELRSWSKVPVIVLTVQDSDNDKIAALDGGAD
DYITKPFSVPELLVRMRVALRHSPQNAAEKTEMVSGPLKVDVPGHTVTVE
GELVKLTATEFNILKVLIKNKDKVVTHRMLLNEVWGPNSVEHTHYLRVYV
GGLRKKLHIREELAEIIVTEAGVGYRLLDL
>Bd3511 lexA, transcriptional repressor of the SOS regulon
MTMKTPLPPLTPKEKSVLEFIEAHILSSGVSPSYQEIKDHFGLASFNSVQ
NYLKQLTNKGYISNPQNLKRAIQVLHSASAVQDQLQSKTVSTKTGSPRTQ
LLQARDEILSLPLLGKVAAGQPIEAIKHDEFVDVPPSMVRNPSKSFALKV
QGDSMIEDGIFDEDIILIQKQNSANNGDIIVATVDNEATVKRFYLRPRPE
TGDADKMVELRPSNSTMKSMWYTPDEVEIRGIVVGLIRKF
>Bd3075 lysR, transcriptional regulator, LysR family
MPVRIENQVQWLNYHHLHYFHVIAKEGSIAKAAEKLNMGQPTLSIQLKQL
EESLGKNLFERRKQRLFLTEAGKIAFEYADQVFRLGAEMVEVLQDRLQNN
RVHVQIGALDSVPKPIISEVVLQAYKQGNCAVSVLEGAGNDLLRELSAHQ
IDLLLSNYPPNVDFQTVYAKSIAKLDVVVCASAKYKHLRRDFPYSLEGQP
FIFPTIHSRLRRDLEHYFSVNGIRVDRIAETQDTSLQKLLGQEGVGLIPI
VEVAASDLIREKKLVVLGTLPGIYEEIWLMAANRKIDNPIAAKLMKSFTL
>Bd0902 lysR, transcriptional regulator, LysR family
MQSDQLDGLIALKLVAERRNFTAAATELGVSASAVSQAIKQLEGRLGVAL
LSRTTRSTSLTEAGEQFLAQAGPALDQILSALANVGTYAQKPSGLLRLNM
PRMIYPWFLAPIIASFRKKFPEVAVELFFEDATSDVIGQGFDAGIRLSDV
LAKDMVAMKLVGPVRFVPVASPKYLNKAGRPKHPKDLLGHECIVSRITPE
RIYDRWEFENKGTEFQVQVKPALIFNDSVLALRAALDGLGIMYAAEEAVS
DQLSSGKLELVLNQYSTTSAGFYLYYSKRSQVLPKLRAFIDHLKAEGVV
>Bd1080 lysR, transcriptional regulator (LysR family)
MELLVRGVRSIKATPQGEVLYEYAKKIIHLTQQAEIAIKSIGNQMKGQLR
IGTLNSLGLHVMSPIVGRLMRHNPELTLKIEYDRGEELIKGYKKGQYDVL
ILPDVQTEFASELDSSEQKFLLKEEMWLVGSSKDEKMPQQIMVKDMGAFP
LVDFTEEFPAFYSQLHGKIQTQGAKVTSIFESSNVGTLKRVIEAGLGWGF
LPAHSIKKQVRSGRLSRVYVKDMHYEIDLMFYYKKNSDSRALVEVFYQTL
AQQEKG
>Bd1006 lysR, transcriptional regulator
MRKVTYSEYTVAYMEQLDLNQIRTFVKLVQSGSFTKAAEVLKQPKSRVSR
RLSALEKDLGVQLIYRTTRQFQLTEMGRIYYERARGLIEGLETLTGEVSE
STAEISGVIRVTASDDMGVKHLPLIVDEFTRQYPRVRFDLYLTQAYVDLV
KESVDVGIRIGNLKDSSLRARKIGTVRNLLVASPGFLERYRVGEDLTKLA
AAPFLGLTQQPKLEVVRSSDGKRLTLKTNPIVTANNPEMLLNLARLGKGY
AFVPEFLCKDELRDGRMVQIHKNLRGDEVSVSLVSPDTKETSQKVKRFMD
FAYKRLKEVYFA
>Bd0903 lysR, transcriptional regulator, LysR family
MSQPALSKALRLLEQEVGTKLLEPEGRGLRLTPAGQRFKDETAGLLDQWL
KVPENLLRSDSEKVPYRLGSFEVFTTYFLSHLLKSVDLGPLELHEYRPGR
LEQAIAEGVVDIGITYAPIPKSGVDFTEVTKIKMGIFGLKKFKGLNWSEL
PFVVPLLPTQGTPSKVQGLDGWPDHEFNRQILYRVTMMESAMELCRQGLC
VAYLPEFVVSLHNKALLPDYRLIELESPLSQKERKQSVFLIQRKNNPEST
LYRQIAKSLRNLG
>Bd0931 merR, transcriptional regulator, MerR family
MINMVISDALLDIDQVNQLTGLSQATLRNWEKRYGFPKPQRSEGGHRLYH
VEEVQKIREVVSLCKNGIKILEAIERVLKGTSPVSDTAVAISQPTSPVFV
EPLNEGISQVLKALYKYDMDLAEQYLSRLGMRLSETDLLEMVYPKLLMKV
GEDWENSRINIAQEHFSWNFLRTRLLNYFKSNRVGVNQPKVLLTTPPGEL
HEGGLIVLAAYLMLKGWQVYYLGVNLPMDDLLHAYEGIEPDIVCLSAIES
ENIEKNWNELEKMKCVVVGGPCLAELRVQELPESKHISLVGGNLHSAVAQ
MELLLHSAT
>Bd2837 narL, two-component response regulator homolog
MTCYSEQRIVGKDMSTLENTLQNPVSFFIVDDHPVTRQGMRVALTSLSAK
IQCLGEASTVGSAMQNLKSLDVNYVVLDHLLPGQSGLELLTMAASARPDL
KFMLVTQCEDAETLAQYQRLGVKVMLSKVSAMDVLEDAVKSLLEDKDYVC
PALEKVMGEPRLTNVLTPRELEVVRMIAQGKTNKEVAACLECSEHTIKTH
KTNVMRKLNLSNAVEISVWALKRNLA
>Bd1546 nusA, N utilization substance protein A
MAENVFSDLSKVIDQVGKDKGIDKQVVIDAITQGMLVAARKKYGTYREIE
AAYNEDTGEVELFEFKEVVPREKYIDEEVEIPLDEAQKLDPNVQLDDSIG
IKMEASDLGRIAAQTAKQIIMQKVRDAERNIIFNEFEERKGEIASGIARR
VEKGAIVVDLGRTEAYIPPREQIPGEQYKPGDRIQGYLSEVRQTTRGPQI
IMSRADERYLMKLFEMEVPEIYDGVVEIMAAAREPGQRAKIAVRSKDNSV
DPVGACVGMKGSRVQNIVQELRGEKIDIVPWDEDITRFACNALAPAEISR
VFLDDANREMEIVVPDSQLSLAIGKRGQNVRLAAKLTTWKLDIISESSAA
SRTAESIFNLMLIPGMSETMAQNIFQSGFGSFQAVATAAVEELMTIPGYD
DPDKAEKLSKEAKGLVAKYESEGVPVPTAPSVAKDKGSNVSAKEQADLLL
KQELKKLEAEEE
>Bd1097 nusB, transcription termination factor nusB
MKLTARRQARELALQVLFQTEFAPQISYQTFLEVFEQSLDPEVITYADLI
VTGVKSNKEAIDSKIQASSAHWKVERMATIDRNILRIAVYEMRFAADPIK
ENIAINEAVEIAKKYGTSDSGSFVNGLLDQVGKAH
>Bd2992 nusG, transcription antitermination protein
MEKKWYIVNVQTSCENTAKKAIEEKIKSSKMEEFFGEILIPAESVVELVK
GQKQTKSRKFFPGYIFVQMFLNDETWHLVRNSSKVTGFVGGTKTRPPEVP
EAEVLRVTQQMAGVAEKPRPKVKFAVGENVTVIDGPFSNFQGTVEEINED
KAKLKVLVSIFGRPTPVELDYIQVEKP
>Bd2516 oxyR, Redox-sensitive transcriptional activator
MSPKVNFSLTQLEYVMAVHKYGHFAKAAEACHVTQPTLSMQIQKLEEDLG
VVIFDRSKKPILLTHMGKKLISQIQTVLFESRKIESIIQHEQKGAKQGVL
SIGVIPTVAPYLLPRLLPVVEEMFPGVDLNIKEMQTDQILEALNGDDIDV
GVLATPTLMPKMFEFPLYYEPFYVLCEKNHEYAHMKKIKYQSLGMEDIWL
LEEGHCLRNQVLDICSVKKGKGQGRRYKFESGSLETLKNLVDLYGGYTLL
PHLATEQVGARSHLVPFERPIPAREIGLVYRREHYKNELIEALGEAILKS
IPEELRKIRPKDLDVLPIA
>Bd1453 oxyR, transcriptional regulator, LysR family
MSLMMDDIKYFITVCETLNVTRASEIIGISQPALSYSIKRLERELGGNLL
IRLKNGIQLTKLGEEFRQRSRRLMYEWEQAQNLANPESGLIQGSYTIAIH
PSVALYTLGSFMPKLQKEFLGLDFNFIHGLSREMTEKVISWEADFGIVVN
PIEHPDLVISKLCTDEVTIFHAKNAQDKLIYDQNLAQSQYILKKLSKKTN
FTGVLSSGNLEVVAKLTSLGFGYGLLPARVAAQYKNLEKMKDAPVFKDEI
YLAYRPEKHNNTISKKIIQTIKAATF
>Bd2619 oxyR, transcriptional regulator, LysR family
MTLTQLEYILAVADTGSFSHAARQCHVTQPTLSMQIQKLEEELGVILFDR
TKQPIRPTSVGEEVLQQARLVVKGSQHLKEIVDDAKGSLRGELRIGIIPT
LAPYLLPLFLKKIKDAHSRLHLTFEELQTEVMIEKIRNHSLDLGIVVTPI
DDLNIANHVLFYEPFNVYLSKGHPLLTQKTLDEKDLSSEDVLLLNEGHCF
REQSLSLCRNKKVPAAMERSFSFESGSLETLKKLVDQGESFTLLPYLAAM
DVQDKKRLRPFSDPVPTREVSLVHGPHFQRKALLKALIETIKRNLPEGLS
STRSKNQLKIDNPLGYLK
>Bd3677 paiB, transcriptional regulator protein Pai2
MQLYNPQKYKSADLIEAYELMDYFPFATVISVADGAPFVSHLPLTPKKVD
GRIELIGHMAKANPQWRQFTDCDVTAIFHGPHTYITPVWYAKDDVPTWNY
SVVHVKGKVELLYGEDLIECLKDLSAQSERHWPSGWQFSIPEDLQGESLE
RHIVGFKIQITDISYKKKLSQNRRPEDRAGVLKGLAGRPDEASQQVLGAM
EKMYSADGKLKGSHD
>Bd3905 parB, chromosome partitioning protein
MSDIAVESSNKKKGLGRGLGSLLGGPAPEQTPAAPKAAAAAPSINNTVAS
TPAPAAAPQVATPVAPPVDPESKIWKVGIDKLSPGQYQPRRTFEKEPLQE
LAQSIKENGILQPIVARRTASGKLEIVAGERRWRASQLAGLHEVPVILKN
YDDKQALELAIVENIQREDLNPIEEAEGYSRLISEFKLSQQQVAEKVGRD
RATVANAVRLLSLPDSVKEMISGNELSVGHAKVLLSLQDPKKQIEFAKKV
VNEKIAVRKLEKMVQAVVKGHEEVEEAPTFDSNVTQRLISGLSDELQKML
GTKVNIDYANSKGKITIHFYSDDELTNMVDRLKEGWQ
>Bd1017 phoB, DNA-binding response regulator PhoB
MVEDEQEIRELMALHLLRQGYRVTECASAEEALNEMNRQNYSLFVLDWML
PGLSGVDIVDKIKAKNTGASVLMVTAKTEPQDIVAGLEKGADDYMTKPFN
PSVFIARIKALLRRSQVQAAAPAADDGEVSLLGLKINFKSYEISYNGEPL
HLTPSEFKLLGALVQNHGCVLTREQLIENIQGEGINVVGRTIDTHVFGLR
KKLGEWGDRIETIRGVGYRVKVDIA
>Bd3148 pkn, 
MSQAVEQFGKYILLERLAAGGMAEVYLSKSTGAVGVNKFVAIKRILPQYS
DHQDFIEMFKEEAKIAVNLNHGNVVSIYDFGVERAQFFLVMEYVEGRNLR
QILNELKKTNTQFTIEQIVYMIKEVAAGLDHAHRCIDGTTGKPLNIVHRD
MSPQNIMVSFEGEVKIIDFGIAKAETQMEATKAGTLKGKYGYMSPEQADG
QSIDPRTDIFSMGIVLWELLANDRLFTSNSEAAILRKIRECQVPSIRKIN
PSVPPELERIVNKALAKDKSLRYQTAAAFHRDLNRFLNTQYPEFSPHDFS
VFMKNAFSAAFLEQRRKLVEFAKIQSQPSSEDKTIVTQTDMRTPQRPPAY
APPAEAAEGEERLDLDTSTDIRVNLDNLKTPPKPSMPKVPGATDTNITQT
RTSATGTFASGPGTMTRTPSSVSPMGTRTSIGRPAPSSSMEDITGIAMKA
VGALLVVVGLWWGYTNFVAKKSPGKSGATAGLTPKPATAGNAQAAGTLQQ
TELAATSPEYTVTIYSNPGGARVVIDGNDTGEFTPVRKTVKANTPYSLRL
VKEGYTDLVTTITPTYEAYSFTGTLQRLPRVASLIINIVNGGANPELRIA
GVPVSIKPSGDAYLIQAEVGVKIQARNKTTGLSAETTITVPADQRKIVDL
YLK
>Bd2916 pobR, putative transcriptional regulator
MPKAIRPIKTLHPMKSLGVVKAERGDIRAERLEGRVKPAVPFPHRHDFFQ
VVVVAGGRGQHEIDFETYPIKAGSVFVVKPGQVHRWDLQGAKGYVLEFYV
ESLNLDAMDRELFQSLHELPGHLRLSSAAQQKEFYFYCEKMCEEFLSRDQ
GYVSALKSHLNILILSLFRLSGRTVVKKSEGAFLGNFERLIELNFSRQHN
VEFYAKALGLSPKALTMRVHRLLGKSAREMIHDRCLLEAQRYLGYTSMPV
AEVGLALGFQDPNYFSRFFKAKTGFSPGAFRDKNN
>Bd3394 ragA, two component response regulator
MRCLVVEDDNEIATIVKQGLGELEGDVDVESNGRRAFEKAQTNHYDIIVL
DLMLPEMDGYTFAKSLREKEINTPILILSALRELDDRLKGLSMGGDDYLT
KPFAMAELQIRVKNLLKRSQKASEVTQLVFQDLKLNRLNRDVVRAGRKLD
LQEREFVLLDLFMSNPNKIIGKQTILKEVWNYDFDPQTNVVDVLVCRLRN
KLEKDFPTRLIYTVRGVGYVLKSS
>Bd2324 recG, ATP-dependent DNA helicase RecG
MVHNPCMALRLDTQIQFLKGVGPKLGDLFSRKGLKTLGDLFEFYPRAYED
QRAARNISSLRPDDIVSIKATVVAVHSVNMGRSARKMYDVLVRDASGQIH
CKYFRVPYKGYFERFKPFTEVRVVGKVTEYRGRLEFHHPDIKDVEPDEET
QDALIPLYTEIEGLATAKIMKLVRSAFAQIEEWPEEAFPKWMREKYNLIP
RKDALKDIHFPDPNKAKQYSEFKTAAQKRIIFDEFFWLELYLASKKAGFQ
KEGAPQIRNSGEKMRALLQSLPFEMTGAQKRVFTEIKADLEKGHPMHRMV
QGDVGSGKTLVSFMAAIYAAESGYQSCLMAPTEILAEQHFKNARKVLEPL
GIRLGLLVGKSKASERKQLLAALGAGEIDLIIGTHALIEDEVQFANLGLV
IIDEQHRFGVEQRGVLKNKGNSPHFLVMTATPIPRTLAMTVYGDLDVSII
DEMPAGRSPIQTRATFESKRPQALQFMLEQIQKGRQAYIVYPLVEESEKI
DLKDAVSEYEKLKELYPQLKIGLLHGKMKPDEKDQVMDQFRKNEIQVLVS
TTVIEVGVDVPNANIMIIEHAERFGLSQLHQLRGRVGRGEHKSFCILIMG
YAVSEEGKARTEMMEKTTDGFKIAEFDLEMRGPGEFMGTKQSGLSGFKLA
NLVRDMAILQEAREAAFEVLRKDPRLSYVENQGLKAELLREHGPAALAGI
A
>Bd3461 rhlB, ATP-dependent RNA helicase
MKFSELNLDSQLLSAIQKLNYDDCTPIQEQAIPPVLDGKDVAGLAQTGTG
KTAAFVIPVMERILRARPIQGEVTEEQKALIEKRAYKDWKPQNFVLILVP
TRELAEQVQDNINKLSVDSGLRGFAIYGGTGYDKQKEALKNGVEFIVATP
GRLIDLYKEHLVDLKQVRAIVFDEADRMFDMGFKDDMKYILQRVPRERQL
LVFSATLNFDVLNTIYQFGSEPVEINISRDQAKADNVKDQIFHVGSDEKP
QHLLSLLKVHNPKQAIIFTNFKMSVERIAKFLVENGVPAMAISSLLTQAQ
RNRVIEQFKAENDMNVLVATDVAARGLDIKGVDMVVNYELPMDSESYVHR
IGRTGRAGTTGQAFSLVGDKDIESLGRIEDYLKHKIEIGYLENDQLLKDF
KPMTSSYDGHYPKSLDRARAPREGGRGGDRGPRREGDRGPRRERGDRGPR
QDRGPRPEGQQKSAQGAGAQQTQGGGQRPDSRPRRQEGGPKRPHDAKRGE
QRQPRNDQARKPHGQQQPRQGASAKKRVPMAAQKSIGQKVAGFFKRLFS
>Bd0235 rhlE, ATP-dependent RNA helicase
MTTTKFTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQT
GTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAY
SKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMDLHGQKHLKLD
RVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFSATMPHEIQTLA
NRILVNPKKVEVTPVSSTAEKVEQRVMFVDKPQKLDLLLHILKDESLSKV
LVFVQMKYGANRVVDRLTKAGVAAAGIHGDKSQNQRQRALEEFKNGDVRV
LVATDIAARGIDIDGITHVINLELPHIPESYVHRIGRTARAGATGISISF
CTAEERSFLFAIEKTTRTKVTVVEDHPFHSTEIANAPVMTVGKAKAILEG
QRLQNKAKNRGGGPRRQGGGAPQGGHGGKKAGGKPQGGNKPDHGGKTHTK
SEHKSEGAASHKTHSKPAHAKPAHKPAHKSEGKSAGKSEHAPKKRSFWSR
LRNKD
>Bd0324 rhlE, putative ATP-dependent RNA helicase
MKFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTG
KTAAFAIPIINMIHTEKSSKRAIGIKCLILVPTRELAQQIGEVFNKLSKH
TKVKPFALFGGVEQDAQIQKLQDGIDILISTPGRMFDLIAQGHVDISRIE
TLVLDEADHMLDLGFIDDITSVKRKLTKRHQTLFFSATINPEIKKLAFSQ
VRSSAIRIQISPEDPVSKNITHFVMHVEMDDKRFFLAEYLRQNPDGKFII
FVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCKILI
ATDLSARGIDIPDVTHVINYDLPEKPENYVHRIGRTGRGFNKGVAVSFCS
TEEKPLLAEVESLITKKIEVLKVSKQDYKAIVETQDLSLDASLQELLNSE
DNYKKASKRKKK
>Bd0316 rhlE, ATP-dependent RNA helicase
MGEGSKPLFFVSFQRVVVHLPAMKLHNSPVRAHTFQEMNLAPVLLPALTK
MKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLTTLQKKPE
ARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKN
PRLIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQS
TLRGPRQTMMFSASFGSNVESIAQLFMKPDVVMVRSEKAEAPVESLKQKV
LFLDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLI
HGGLSQGQRNRVVRGFREGEIRIVVATDLLARGLDVPHVDHVVNFDLPFQ
SEDFLHRIGRTARAGRGGEAITFVTPSDTRMYAKIKGYLQGAQEIKVDPT
FAFIDRSKKFDKNKPAKGNEPARRNAPGKPQAVKKAAPAGKPKSKGGKIN
PFAGKTVAPKKSGAKKSGFAKRK
>Bd0065 rho, transcription termination factor Rho
MSEPKDQQGVEVAKKRTRTAKSTSEDTSAPAAEASPAPAAEAAPAAPAPS
ENAPVSAAPAAAPEARQDRPQQQNQQRREFRPHNRDNRDRGDRNDRGDRN
DRGDRNDRGGHRGDRGNNQRRDFRHDRGRDEAQPMGDDAHSAMPAQVQDV
DLADISLTDEEKSWLSSKDLKSKNITQLTELANKLKIENAAGLRRQDMIF
EILKRAAKLGQDIYGSGVLEILPDGYGFLRSPDYNYLPGPDDIYVSPSQI
RRFGLRTGDTVTGTVRPPKDGERYFALLKVDSLNFETTEKGKDKILFDNL
TPLYPNERLKLEHNPGEYTTRVVDLMAPLGKGQRALIVAPPRTGKTVLMQ
QIANAITHNHPEVKLIVLLIDERPEEVTDMQRTVKGEVVSSTFDEPPTRH
VQVAEMVIEKAKRLVEHKHDVVILLDSITRLARAYNTVVPPSGKILSGGV
DSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTG
NAEIHLDRKLMEKRIFPCMDINKSGTRKEDLLVDKADLNRLWILRKVLAP
MNVIDAMEFLIDKVEGTKTNNDFLKAMSGPG
>Bd1941 rncS, ribonuclease III
MIDQGRKSLEERVGHQFKNPALLERALTHKSFANELRNTVEHNEKLEFLG
DAVLDLVVGEFLYEKFPTDTEGGLSKKRASIVNEEVLSELALEMGLNKLM
QLGKGEALTGGAQKPRLIASSFEAIVGALYLDGGFEVARSFIRQEFVPLA
DRVCGHEDFERDYKTRLQELVQKSSKETPRYEVLAEEGPPHDREFLVCVK
VKEDVWAQGRGRSKKNAEQMAAKNALEMKYKETN
>Bd0303 rnk, regulator of nucleoside diphosphate kinase
MNNNNSTEPRILVTDQDFHRLSALVSQVEGPFAEALEEELSRANVIAQKE
IPKNVVTMNSRVQFLDEVSGQESEMTLVYPQDAKLEEGRLSILAPVGIAL
LGLSVGQEINWKLPNGQSKKLKVQAVTYQPEASGNFDL
>Bd1569 rnpO, putative DNA-directed RNA polymerase, omega subunit
MARVTVEDCLEKVPNRFALVLMVAKRAKQLLKGAEATVSTRSNKYIVSSL
REVAMGNVGYQDSLDANEAIRQIEKDLNK
>Bd3314 rp32, RNA polymerase sigma-32 factor
MAKTKAKSPSTPKTKSPSKTASAKKPSGKAASGKNTKPAPTESKSVVAEL
VDDAHSDELRSHEEAEKAYAVPSVEDDLPDVEEDTKTLAVADTSKALTSA
DPLVMYLNEIRRYKVLTREEEMALAKKYFESKDPEAAQALVKANLRFVVK
VAAEYSKFGSKMIDLIQEGNVGLMHAVREFNPYKGARLITYAVWWIRGYI
QEFLMRQYSMVRIGTTQNQRKLFYQLQKEKEALDAMGIEPNIGLISSRLG
IPEDEVRDMTMRMSGRDVSLDRPVDDESGTTLGDLQRGPSDQPLDEALAH
NEQLEILKQKIEEIRPELSEREKIILDERILNDDPLTLQEIGEKHGITRE
AVRQMEARLMKKIKAKMEEDASE
>Bd2950 rpoA, DNA-directed RNA polymerase, alpha subunit
MIKPKGFEVDRDSLRDDYAKFIIRPLERGFGVTLGNSLRRILLSSMMGSA
ITAVKFEGVLHEFTTIPDVLEDVTDIILNLKEVRFKQYTADSLTLKISKK
GPGKVTAADIQTTDKIEVLNPDLPIATLGANANFNAEIVVSFGRGYVPVE
NRETDLPVGFIGVDALYSPIRKVNYNVSNARVGQRTDYDALTLEVWTDGS
LKPEEAVALSSKIMKEQLQIFLTFDETMEPAEEARELGSPTLNENLFRSV
DDLELSVRSANCLKNANIRYIGELVVRSEAEMLKTKNFGRKSLNEIKEIL
GEMGLGLGMKIEGWPPAGWDPSQPPQKRETQQ
>Bd2984 rpoB, DNA-directed RNA polymerase beta chain
MGLGTFPPKRMSDFLITESTLEKTPVTASNIRVRKSFAKNKQVIDIPNLI
ELQKSSYEAFIQKDMDPDRRGDAGLNGVFKSVFPITDFNNTASLEFVSYT
LEPAKYDVDECRQRGMTFAAPIKVTLRLIVFDVDEETEARSIRDVKEQEV
YLGEIPLMTANGSFIINGTERVVVSQLHRSPGVFFDHDGGKNNASGKLIY
SARVIPYRGSWLDAEFDQKDLIHVRIDRRRKFPVTILLKALGYNSEQLLE
YFYDLDEVYVKGGKLFRKLDIERMSGQRALTDIVDPKTGEALVKAGRRIT
RAIVKKIKDLDITELDVLPEDLEGKVLAKPLIDESTGEIIADANAELNAA
IIKRSIEAGIESFFMIFFDGLTVGPYLRNTLLVDKVSNKEESLVEIYKRL
RPGEPPTLEAATTFFGRLFFDPETYDLSEVGRIKINHRFGISMDECPPSH
RTLTHKDILSTIKTLIDLKNGRGVIDDIDHLGNRRVRSVGELLENQYRIG
LVRMERAIRERMSLQDVETMMPHDLVNAKPVNAVVKEFFGSSQLSQFMDQ
TNPLSEITHKRRLSALGPGGLTRDRAGFEVRDVHPTHYGRICPIETPEGP
NIGLIASLATYARINNYGFIETPYRKVEAGQVSKDINYLSALEEAGHHIA
PAARDEAGNKAIQTATTITRRDGEYEIVDKDKVALMDVSPSQLVSIAASL
IPFLEHDDANRALMGSNMQRQAVPLLRSRAPLVGTGVERLVARDSGTSIV
AQNDGIVEEVDASRIVIRRFAKGGELGANVDIYNLTKYQRTNQNTCFNQK
PIVTVGDKISKGDIIADGPSTELGELALGQNILVAFTPWQGYNFEDSILI
SERLLKDDVYTSIHIEEFECVARDTKLGKEEITRDIANVGEEALKDLDSS
GIIRIGAEVRPGFILVGKVTPKGETQLSPEEKLLRAIFGEKAGDVRDTSL
RAPSGVYGTVIDAQVYSREGADRDERLSLIIEEKKRKLEKDLAVEQNVIK
NNAISKLRDILVGKITTGVLLNEDGSQKLLNKGQEITEADLETVPFELLN
YIPLEQDLEFQVNKIIDNARNQLDAVKLVFNEKIDRLRKGDELPPGVIKM
VKVYVAIKRKMQVGDKFAGRHGNKGVVSKVLPAEDMPYLADGTPVDMVLN
PLGVPSRMNIGQILEVHLGWAAHNLGKQLGAHLEKWNAENARTEMKDIFS
DSDISAKLDKADDASLKSMVQRMKHGIHVGTPVFDGARESDVKGLLAKAQ
VPSSGKSVLFDGRTGEPFTNPVTVGIMYMLKLHHLVEEKIHARSIGPYSL
VSQQPLGGKAQFGGQRLGEMEVWAIEAYGAAYSLQEFLTVKSDDVAGRTR
MYESIVKGENILEPGLPESFNVLVKELQSLALNVELMESDILRDQDEDFG
DEEVIEVEPVAPVASKDEPEQH
>Bd2983 rpoC, DNA-directed RNA polymerase, beta' subunit
MRDLLNFFDKPKDPLSFDAVRVSLASPEMIREWSFGEVKKPETINYRTFK
PERDGLFCAKIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTQTKVRRE
RLGHIELATPVAHIWFLRSLPSRIGNLLNLSLKDVEKVLYCEAHVVIDPM
ETTLEEGQVLTEEALQAALNEFGPSFKYGMGGEAVRDLLKKIDPEYLSRK
LRLEVKDTKSEAGIKKLTKRLRVVEAFKGSINKPEWMMLEALPVLPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPDIIIRNEKRMLQ
EAVDALLDNGRRGKTFTGPNKRPLRSLSDMLKGKQGRFRQNLLGKRVDYS
GRSVITVGPTLRLHQCGLPKKMALELFKPFVYNKLEEKGLATTIKQAKRL
VDQETVEVWDILADVVKEHPVLLNRAPTLHRLGIQAFEPVLHEGKAIQLH
PLVCTAFNADFDGDQMAVHVPLSVESQVEARVLMMSTNNILSPANGKPII
NPSQDIVLGMYWLTRMRPGAKGSGKAFSSVQEAQYAFETGLVDLQAVCKV
RINGTLQETTVGRAILSDIVPKEVPFNEVNVTMGKKQIAALIDKTFRLAG
AKATCILADKIMEYGFKYSTAAGMSIGIDDMVIPAAKAPMIADAEKQVTE
IQQQYDEGLITDGERYNKVVDIWAQTADKIAKEGMNAIEKQTFNVNGKEV
VGPSFNPIYIMADSGARGSAAQIRQLGGMRGLMAKPSGEIIETPITANFR
EGLTVIQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDVVVSEIDC
GVEDGLEITPIYEAGEIVQNIGDRILGRTALKDVVDAATNEVVVRANQEI
TENDVKIIEGRGIDKVDIRSALICQSKRGVCVKCYGRDLSRGATVNLGET
VGIIAAQSIGEPGTQLTMRTFHLGGAASRAVEQSVHTSRYDGVVKLQNVH
AVTNRNGKLTVMNRNGSALVIDEAGRERENFKLVYGAVLNFKEGDKVAKG
QTVAEWDPYSNPIIAEVSAKIQYQDIEEGSTMQEQVDAVTGFATKVIMES
KSSDVKPTVFLVDGAGKTLNLPGRDIPARYLIPVGAQLLVADQQEVHAGD
VIAKMHREASKTKDITGGLPRVAELFEARKPKEAAIISEIDGYVTFGKDV
KGKQRVIVTPEVGEQKEYLIPKGKHVAVREGEYVRAGEALMDGPTNPHDI
LAVLGAKALSAYLVDEIQEVYRLQGVGINDKHIEVIVRQMLRKVEIRDAG
DSRFLAGEQVERYAYMEENERINKEGGQPATCSPLLLGITKVSLSTDSWI
SAASFQETTKVLTEAAINSRTDHLRGLKENIIMGRLIPAGTGLTSYKRWK
VSVHEDDDIGFVALPGMTSSVQPQG
>Bd0242 rpoD, RNA polymerase sigma factor RpoD
MKPNLPNKQEKEPVKVLSLQEQETLIKEEIQRFLKLAKEKGALTIEEINE
LLPPEIVAPSVLDSFMQGLEAGGVVISDLSESSKEEEGEGAFLENVDSED
EEIDDEEKAESEDVKGNDPVRLYLRKMGSVSLLTREGEVEIARRIEKGER
EIVRAILLSPLGTYEIIQLGKRLDEGRIKVKSIFRGLEDEDTQYDEKEYI
DKIHELIGRVTEYQKAAEKLFMTLRKEETNTPARQAAMKELVAMNDKLMA
NFESVNFNRKTINRVVIKFKNLVNRIGTLRRRIKDGVERTFSKDVTAMAE
RMKLIDANEKELTRMTRDTGLNYQKFKSYVLQAQEAEKRISRLDSETEMN
HNWVKETYTAIWKGEREADAAKSELVEANLRLVVSIAKKYTNRGLQFLDL
IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPV
HMIETINKLVRTSRYLIQELGREPTPEEIADKMDMPVDKVRKVLKIAKEP
ISLETPVGEEEDSHLGDFIEDKKVINPAEAIVNLNLAEQTRRVLSTLTPR
EEKVLRMRFGIGEESDHTLEEVGQDFNVTRERIRQIEAKALRKLRHPSRS
NKLKAFVDS
>Bd0881 rpoE, RNA polymerase sigma-E factor
MSFSDAADFAKFYEAHAPKVRGLLFRLVGESALSDLTQEAFMKAWEHRNK
FRAESEASTWLYRIAYNCAVDHLRKAGRKEEVSPEQVEESLEKNLSNREL
VDLALGTLEMDMRAVVVLFYLEDQSLKDIALALEIPEGTVKSRLSLARQK
MSDLLGKKGVSL
>Bd0743 rpoE, RNA polymerase sigma-E factor
MERDLNVTDLELVEKVKSGDRRSFSELVKRHQRSVLRMSLRFVKDMDTAE
DVTQEAFIKAYEKLNTFEGRSSFKSWLFQIAVNTARNKLREWKRDTVDID
DVQLAVDAEAETTLVHTAVSDILKNEVEKLPFKQKTALVLRVYEDLSFNE
IADIMECPYDTAKANYRHALMKLRQTFEQQAELKNWTEEVGGFFLEVNQR
FAEAEG
>Bd0843 rpoN, RNA polymerase sigma-54 factor
MALRQTMNLSQSLVITPQLQQAIKLLQMSRMELESAVRSELEENPILEEA
ESALKEEDLQRTKEAANEVEHSETPDQQNIQDPQKQDEFEWESYIEANQK
PPQSGMAGSEEIMNYENVITASQTLHDHLYWQVKMNGFSEEEERAADALI
GAIDDDGYIKVPLEQIAEEEKVDLALLEDTLTLIHEFDPPGVGARDLQEC
LLIQAKHMEEDTHDLVTLIKNHVKDLEKKNYEAIAKALNRDVEDIVEICK
IIYAMDPKPGRAFVSSDTHYVTPDVYVYKVGDDYVVSLNEDGLPRLKISN
FYKNMLKGGKTTGDKTQDYIQEKLRSAVWLIKSIHQRQRTIYKVTESIVK
HQREFFEKGSEHLKPMVLRDIANDIGMHESTVSRVTTAKYVHTPQGIYEL
KYFFNSGISSSDGDSLASESVKIKIKDLVAKEDPKNPLSDQKIVDLLKVE
GIQIARRTVAKYRDVLKILPSSQRKKYF
>Bd0561 rsbU, sigmaB regulation protein RsbU
MAKEQDELKERISELEHELAVKEAELHRYRLELSKANGALEKMIAQISQE
LKLAQVMQKFLSPTELPNVQGFEFSTKFLPGTRSGGDYFDIFEHEDKLKF
GILISSASGYSLSSVLLSVIIKISSQIEARRGLEAHKVLALLAKEVVPSI
QNEDKASVFYGIVDRRSFEMQYCSVGNIDGFMQVYGQDSLVELLPTGPSL
GKDFNTEPQSRVIQLNPRDRLILATEGLKLSQNSLGVNWGGHGISEAISR
APKQGVHELRNEILLSNERYSGKQDPVRDQTLIVTEVKDRVIKLASR
>Bd2404 rsbU, Sigma factor sigB regulation protein rsbU
MKKRGLSIRYKILLLLTSLPLITLTVYLVLALKIFEDDKIAYVFDSSSSM
SGTMAAQIKTQLNAVLGTTKPIFQDYLSQQKFSSVGESIFQNEFNLEAIV
VFKPSATGAYEKAAVLEKVPSQTDGVLSSLQAQMSGYFAEVEAARRVVKV
PFSDDRVFIMEKVSDETNTRNTVFLVIVKMSEASEMFRAAMSQKMYLISS
DGTVLFGPDGMPGQKLQSTVSPQFLEGTNKQIAQGAETDRAVDGKELLVS
FSRAGFGDLIVVTTVEKEKALGAVQILIRKSLIFFGILISVTVILSLFAS
SGLTQALTQLFDATKKVAEGDFNIRVDVKSNDEVGSLADNFNIIAAEVSR
LLDQTAEKARMESELQTAKTVQETLFPETQAKIGPLSIAGYYEPASECGG
DWWHYCQIGNKIFLWIGDATGHGAPAALITSAAKSASTIIERLNITPAKA
LELLNRSIYDVSKGRIMMTFFLASFDLDTGELAYCNASHEAPFLMKKNEG
GTLKKKDLVPLNEVNNPRLGQSRDSVYEQTTIQVEPGDLVFFYTDGIPDI
QNPGKEAWGEREFIKALIAANKDFPGVNDSVERFAMSFQAHRQGAPLIDD
VTFFVVKNEGLS
>Bd1002 soxR, redox-sensing activator of soxS
MAAKTTTPALTTTLSVGEVAARSGISVPTLHFYESKGLIKSHRNNGNQRR
YDRSVLRLISIIKISQHLGMSLEQIKDHLSSLPQDHTPTATEWKRLTKKW
NDDLEERIKLLQLLQSQLASCIGCGCMSLKECPLRNPEDRYGKKGTGAQR
LREQCRI
>Bd0423 vacB, ribonuclease R
MQKKKILTGTIKRHPDGFGFFIPDDKEHPDVYIPRHSMEGIMTNDKVAVE
VTPEKGGERFRGELDHVLSRGTKTVVGRFFKMNERTGLIRDEGKGWGQDL
KIKIEDSMQAKDKELVAAEITSYPDDGKPFTGKVIEIIGDAMDPLTDLKR
VIRANHIPLEFSKATLEEAEHFSEVPDEKDFKGRRDLRDKALITIDGATA
KDFDDAVYVETLNEGFLLYVAIADVSHYVKIGTAIDKDAYERGTSVYMPN
FVVPMLPEVLSNGLCSLNPHVPRLCLVAEMLFDFTGELVKSDFYEAVMES
KARVTYGEAQEIIDGNEVEKHKHVKDHILRLSDLAKILMAKRFKEGSLDL
EIPETELVIDGAGVPVDIQRSERLFAHRLIEEMMLAANVAVAKFLSSREI
PALYRIHEPPNEMAIRTLEKYLANFGGKTKLGSGKLQKRLTKALEEFEGR
PEAQILNILTLRSMSQAKYNMNNVGHFGLGFEFYTHFTSPIRRYPDLIVH
RLLKTQVMPNSRYRLMSEDDLATAGTILSAAEQRSTKAERQVQSIKKARF
MQKFIGQEFDGMISSVAKFGVFVLLREYDIDGLVRLDDLGGDRFEFDEEN
LRLVAKRSGFAYSIGDSIRIQVVAADPEQGQINFALAGLEKEEHDDARTP
AERSASAVLKRLHGDKRPKDHISHGKKKHQDREFERGEKRADKKAGNKDF
GKKKEFGKKNFREEGPDRFKQKPGKSKFFGDVRKDAPEGSSEKLRKVEKQ
YNLKPRQLDNEEKRGPDKSLLEMILGPERYREQVNGDAADKPKLSKKLMF
AEQSKLRDNDDNSEKNSDSLKHRTPDRKDSKKRGKTENDRGGVRKARVSP
GRGKGKAR
>Bd3564 yacB, putative transcriptional regulators, homologs of Bvg accessory factor
MILCLDVGNTQIYAGLFDKDKMVLSFRKNSKSGASSDETGIFLRTAIREN
GFDPAKVKQIAICSVVPEVIYSLRGACMKYFNINPFILQAGVKTGLKIKY
RNPLEVGADRIANSIAATHLHPGKNLILVDLGTATTFCAVSKDKDYLGGS
IVAGLRLCMEALESKTAKLPSVEIVAMHEALGRATIESIQSGLYYGHLGT
IKELTERITKECFQGERPMVIGTGGFSYLFEKEKVFDEIVPDLVLKGMLI
ALQHNA
>Bd3681 yejH, putative ATP-dependent helicase
MYRLRDYQQQAVTNTIRYFQKKREPAVIVLPTGAGKSLVIAELARIARGR
ILVLAHVKELVEQNHDKYRSYGLEAGIFSASLGKKDHDQKAIFGSVQSVA
RAPDEFFNNFSLLIIDECHRVAEEGATQYQEVVKKLQDRNPTLCVLGLTA
TPYRMGLGWIYEYNQGGELKTEQSRFFKQCVYELPLSYMIRHGYLTIPVK
VDIPVTCYDFSDLLGKDRAFTTAEVEEVLKNQKRLTPLIINNIIDITEKY
DRQGVMIFASTIKHAEEIMTYLPTDQARVVFGDTDIKERAQIIHDFKQKK
FKYLVNVSVLTTGFDAPHVDVIAILRPTESNSLYQQIVGRGLRLSEDKKD
CYVLDYTGVGHDIYAPEISDKRPAKDTVPVKVACPKCAFENDFWGYADDD
GVVFEHFGRKCKGASQDPNTLEIKPCGFRFRFKLCHNCSCENDITAKACE
KCDAVLIDAEAKLKQAKLSKNAHVMTPDRISFEERKDKNSNPYLEIRYYD
LESNYLSEVHFFNNTTAVKKFNINFLRSHLRLPELAVDLTSPQEVIRFQK
LFRSPIFVIARKQDKFWRVTEKVFAEELAP
>Bd3516 yfeR, transcriptional regulator, LysR family
MNLDQLEFVRAVIECGSFRAAADKVGRSQPALSVAIKNLEDELSLTIFDR
SEYKVKLTPEGQAFYAVAKATLESAQYTARVGIELGRHKADTELHISADP
LISTEILELIALECARPVLPVNLIISKSILQGGYQRLLDGEIDLAIAPTP
KNNEDLESIFLEDVILVTAVSRRLLQEKRTPTKEFLTKHPQILVYTSQTN
ERPDATIRKTGKEAGHKIYVPDHHTKVKMIEGGVGWGRIAKSECTKEKNL
VLIDKSIASETHLELCLVRPKNRPIGVTARSVWNAFQKRSTQGR