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2024-05-18 10:46:57

Gene list

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COG category: Transcription
Organism: Prochlorococcus marinus str. MIT 9313, MIT9313

Number of genes found: 70

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Prochlorococcus marinus str. MIT 9313, MIT9313
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PMT0635 putative SOS mutagenesis protein UmuDSubName: Full=Putative SOS mutagenesis protein UmuD; EC=3.4.21.-; chromosome CDS688212 495 + 0.561616
NA PMT2217 Putative type II alternative RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor; chromosome CDS2344770 1131 + 0.538462
NA PMT1357 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1442488 723 + 0.478562
NA PMT1655 possible transcriptional regulator, luxR familySubName: Full=Possible transcriptional regulator, luxR family; chromosome CDS1761822 288 + 0.527778
NA PMT1168 Helicase C-terminal domainSubName: Full=Helicase C-terminal domain; chromosome CDS1260075 1317 + 0.566439
NA PMT1667 conserved hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS1771697 477 + 0.48847
NA PMT1191 possible acetyltransferaseSubName: Full=Possible acetyltransferase; chromosome CDS1281415 501 - 0.516966
NA PMT0037 SWI/SNF family helicase_2SubName: Full=SWI/SNF family helicase_2; Flags: Precursor; chromosome CDS38153 1629 + 0.539595
NA PMT0741 probable ribonuclease IISubName: Full=Probable ribonuclease II; EC=3.1.13.1; chromosome CDS807496 2067 + 0.471698
NA PMT1139 possible Glycosyl hydrolases family 32SubName: Full=Possible Glycosyl hydrolases family 32; chromosome CDS1229715 258 + 0.445736
NA PMT0683 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS738583 534 - 0.496255
NA PMT0734 possible Arginine repressor, C-terminal domainSubName: Full=Possible Arginine repressor, C-terminal domain; chromosome CDS798376 411 + 0.489051
NA PMT0733 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS798071 243 + 0.465021
NA PMT1083 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; Flags: Precursor; chromosome CDS1169058 1908 - 0.533543
NA PMT1361 similar to chloroplast membrane-associated 30 kD proteinSubName: Full=Similar to chloroplast membrane-associated 30 kD protein; chromosome CDS1447420 804 - 0.558458
NA PMT0437 ROK familySubName: Full=ROK family; chromosome CDS491650 915 - 0.563934
NA PMT2200 possible transcriptional regulator proteinSubName: Full=Possible transcriptional regulator protein; chromosome CDS2325336 2088 + 0.570402
NA PMT0127 Type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS143622 1008 + 0.556548
NA PMT0775 Transcriptional-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS846450 3582 + 0.48297
NA PMT0154 Eukaryotic protein kinase:Serine/Threonine protein kinaseSubName: Full=Eukaryotic protein kinase:Serine/Threonine protein kinase; chromosome CDS172364 1890 + 0.555556
NA PMT0304 SubName: Full=Uncharacterized protein; chromosome CDS349847 150 - 0.46
NA PMT1068 Type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS1153457 963 - 0.54621
NA PMT0475 GCN5-related N-acetyltransferaseSubName: Full=GCN5-related N-acetyltransferase; chromosome CDS527777 492 + 0.510163
NA PMT0012 Protein phosphatase 2C domainSubName: Full=Protein phosphatase 2C domain; chromosome CDS14264 1404 + 0.526353
NA PMT1527 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1618367 279 + 0.587814
NA PMT0118 possible transcriptional regulatorSubName: Full=Possible transcriptional regulator; chromosome CDS135307 990 - 0.556566
NA PMT0380 SOS function regulatory protein, LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS429943 624 + 0.567308
NA PMT0867 product possible regulatory protein, luxR familySubName: Full=Product possible regulatory protein, luxR family; chromosome CDS950668 225 + 0.511111
NA PMT0805 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS882443 726 - 0.528926
NA PMT0082 SubName: Full=Uncharacterized protein; chromosome CDS87907 465 - 0.544086
NA PMT1079 similar to membrane bound transcriptional regulatorSubName: Full=Similar to membrane bound transcriptional regulator; chromosome CDS1164522 897 - 0.469342
NA PMT1725 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1827937 1446 + 0.561549
NA PMT0970 possible Herpesvirus VP23 like capsid proteinSubName: Full=Possible Herpesvirus VP23 like capsid protein; chromosome CDS1048734 291 - 0.460481
NA PMT2014 Bacterial regulatory protein, LuxR familySubName: Full=Bacterial regulatory protein, LuxR family; chromosome CDS2129164 279 + 0.483871
NA PMT2158 SNF2 related domain:DEAD/DEAH box helicaseSubName: Full=SNF2 related domain:DEAD/DEAH box helicase; chromosome CDS2279486 3300 + 0.57697
NA PMT1607 Bacterial regulatory proteins, AsnC familySubName: Full=Bacterial regulatory proteins, AsnC family; chromosome CDS1707682 648 + 0.544753
NA PMT1623 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1724417 756 - 0.575397
NA PMT0784 putative type III sigma factorSubName: Full=Putative type III sigma factor; chromosome CDS859077 810 + 0.466667
NA PMT1141 conserved hypotheticalSubName: Full=Conserved hypothetical; Flags: Precursor; chromosome CDS1230953 477 + 0.540881
NA PMT0581 putative DNA helicaseSubName: Full=Putative DNA helicase; EC=3.6.1.-; chromosome CDS637572 2541 - 0.541913
NA PMT1097 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1187783 774 + 0.547804
NA PMT2197 Bacterial regulatory proteins, ArsR familySubName: Full=Bacterial regulatory proteins, ArsR family; chromosome CDS2323417 306 + 0.555556
NA PMT1499 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1582341 393 - 0.53944
NA PMT1405 possible DNA-binding response regulatorSubName: Full=Possible DNA-binding response regulator; chromosome CDS1491175 699 + 0.540773
NA PMT0346 Type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS394088 942 + 0.505308
NA PMT0146 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS165260 873 + 0.546392
NA PMT2246 Type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS2374409 1035 + 0.537198
NA PMT2043 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS2155849 726 - 0.544077
arsA PMT1001 Bacterial regulatory proteins, ArsR familySubName: Full=Bacterial regulatory proteins, ArsR family; chromosome CDS1079196 330 + 0.457576
hrcA PMT2026 Negative regulator of class I heat shock proteinRecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS2137664 1059 + 0.600567
lytR PMT1072 possible LytR-membrane bound transcriptional regulatorSubName: Full=Possible LytR-membrane bound transcriptional regulator; chromosome CDS1158117 1002 + 0.546906
nusA PMT1526 N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS1616922 1449 + 0.550725
nusB PMT0010 Antitermination protein NusBSubName: Full=Antitermination protein NusB; chromosome CDS12079 669 + 0.475336
nusG PMT2087 transcription antitermination protein, NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS2201616 672 + 0.540179
phoB PMT0994 two-component response regulator, phosphateSubName: Full=Two-component response regulator, phosphate; chromosome CDS1072591 738 + 0.406504
rbcR PMT2007 putative Rubisco transcriptional regulatorSubName: Full=Putative Rubisco transcriptional regulator; chromosome CDS2119998 972 - 0.537037
rimI PMT0510 GCN5-related N-acetyltransferaseSubName: Full=GCN5-related N-acetyltransferase; EC=2.3.1.128; chromosome CDS560588 885 - 0.529944
rnc PMT1949 putative ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; chromosome CDS2059896 846 + 0.553191
rpaA PMT1988 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS2101516 807 + 0.534077
rpaB PMT1994 two-component response regulatorSubName: Full=Two-component response regulator; Flags: Precursor; chromosome CDS2108447 747 + 0.548862
rpoA PMT1755 Bacterial RNA polymerase, alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1847548 939 + 0.555911
rpoB PMT1507 RNA polymerases beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1593258 3294 - 0.518822
rpoC1 PMT1506 RNA polymerase gamma subunitRecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; EC=2.7.7.6; AltName: Full=RNA polymerase subunit gamma; AltName: Full=Transcriptase subunit gamma; chromosome CDS1591304 1905 - 0.501312
rpoC2 PMT1505 RNA polymerase beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1587132 4125 - 0.544485
rpoZ PMT1442 putative DNA-directed RNA polymerase (omega chain)RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1528625 228 - 0.561404
sigA, rpoD PMT1272 Putative principal RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS1359893 1386 + 0.510101
sigB,rpoD PMT0456 Sigma-70 factor familySubName: Full=Sigma-70 factor family; chromosome CDS512667 927 + 0.502697
spoT PMT2111 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)aseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-diphosphatase, (PpGpp)ase; EC=3.1.7.2; chromosome CDS2225482 2331 + 0.528529
ureG PMT2230 Urease accessory protein UreGRecName: Full=Urease accessory protein UreG; chromosome CDS2357571 609 - 0.528736
zam PMT0766 putative acetazolamide conferring resistance protein ZamSubName: Full=Putative acetazolamide conferring resistance protein Zam; chromosome CDS835005 2394 + 0.483292