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2024-05-18 12:10:14

Gene list

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COG category: Transcription
Organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4

Number of genes found: 50

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Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PMM1289 Type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS1240108 942 - 0.367304
NA PMM1697 Type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS1632707 1020 + 0.370588
NA PMM1113 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1059346 738 + 0.432249
NA PMM0839 Transcriptional-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS795015 3516 - 0.281854
NA PMM0714 Bacterial regulatory proteins, ArsR familySubName: Full=Bacterial regulatory proteins, ArsR family; chromosome CDS680482 381 + 0.267717
NA PMM0313 conserved hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS300358 480 - 0.314583
NA PMM1574 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1502288 447 - 0.308725
NA PMM0466 possible secreted protein MPB70 precursorSubName: Full=Possible secreted protein MPB70; chromosome CDS442853 1701 - 0.277484
NA PMM0994 GCN5-related N-acetyltransferaseSubName: Full=GCN5-related N-acetyltransferase; chromosome CDS946932 462 + 0.261905
NA PMM1101 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS1045073 1779 - 0.293423
NA PMM1588 possible Conserved carboxylase domainSubName: Full=Possible Conserved carboxylase domain; chromosome CDS1517428 615 - 0.35935
NA PMM1517 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1457896 900 - 0.311111
NA PMM0169 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS163042 729 - 0.329218
NA PMM1564 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1491846 1449 - 0.266391
NA PMM0577 Putative type II alternative sigma factor, sigma70 familySubName: Full=Putative type II alternative sigma factor, sigma70 family; chromosome CDS541511 924 - 0.373377
NA PMM0080 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS85259 681 - 0.321586
NA PMM1559 conserved hypothetical proteinRecName: Full=NAD(P)H-quinone oxidoreductase subunit N; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase I subunit N; Short=NDH-1 subunit N; Short=NDH-N; chromosome CDS1487908 471 + 0.333333
NA PMM1629 Type II alternative RNA polymerase sigma factor, sigma-70 familyRecName: Full=RNA polymerase sigma factor; chromosome CDS1557272 1002 - 0.353293
NA PMM1493 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1430005 261 + 0.287356
NA PMM0868 probable ribonuclease IISubName: Full=Probable ribonuclease II; EC=3.1.13.1; chromosome CDS824635 1185 - 0.222785
NA PMM1637 possible transcriptional regulatorSubName: Full=Possible transcriptional regulator; chromosome CDS1564595 972 + 0.330247
NA PMM0154 Bacterial regulatory protein, LuxR familySubName: Full=Bacterial regulatory protein, LuxR family; chromosome CDS151577 279 + 0.34767
NA PMM1619 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1548994 747 - 0.380187
NA PMM0363 possible MarR familySubName: Full=Possible MarR family; chromosome CDS345420 402 + 0.335821
NA PMM0562 possible acetyltransferaseSubName: Full=Possible acetyltransferase; chromosome CDS529690 531 + 0.348399
NA PMM0011 Protein phosphatase 2C domainSubName: Full=Protein phosphatase 2C domain; chromosome CDS13183 1344 + 0.279762
NA PMM1640 putative acetyltransferase, GNAT familySubName: Full=Putative acetyltransferase, GNAT family; chromosome CDS1569324 456 + 0.307018
NA PMM0909 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS871171 483 + 0.279503
NA PMM0357 TENA/THI-4 proteinSubName: Full=TENA/THI-4 protein; chromosome CDS341600 624 + 0.283654
NA PMM0936 putative SOS mutagenesis protein UmuDSubName: Full=Putative SOS mutagenesis protein UmuD; EC=3.4.21.-; chromosome CDS894799 387 + 0.284238
lexA PMM1262 SOS function regulatory protein, LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS1216278 624 - 0.355769
nusA PMM1492 N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS1428605 1404 + 0.378205
nusB PMM0009 Antitermination protein NusBSubName: Full=Antitermination protein NusB; chromosome CDS11105 630 + 0.298413
nusG PMM0205 transcription antitermination protein, NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS197424 612 - 0.356209
petA PMM0461 Cytochrome fRecName: Full=Apocytochrome f; Flags: Precursor; chromosome CDS439817 954 - 0.374214
phoB PMM0705 two-component response regulator, phosphateSubName: Full=Two-component response regulator, phosphate; chromosome CDS669400 729 + 0.308642
rbcR PMM0147 putative Rubisco transcriptional regulatorSubName: Full=Putative Rubisco transcriptional regulator; chromosome CDS142916 954 - 0.33543
recG PMM0756 ATP-dependent DNA helicase recGSubName: Full=ATP-dependent DNA helicase recG; EC=3.6.1.-; chromosome CDS715992 2457 + 0.266585
rimI PMM0333 GCN5-related N-acetyltransferaseSubName: Full=GCN5-related N-acetyltransferase; EC=2.3.1.128; chromosome CDS322362 888 + 0.349099
rnc PMM1603 putative ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; chromosome CDS1534329 750 + 0.284
rpaA PMM0128 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS125358 756 + 0.358466
rpaB PMM0134 two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS132148 747 + 0.360107
rpoA PMM1535 Bacterial RNA polymerase, alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1475063 939 - 0.376997
rpoB PMM1485 RNA polymerase beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1420020 3294 - 0.368852
rpoC1 PMM1484 RNA polymerase gamma subunitRecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; EC=2.7.7.6; AltName: Full=RNA polymerase subunit gamma; AltName: Full=Transcriptase subunit gamma; chromosome CDS1418077 1905 - 0.35748
rpoC2 PMM1483 RNA polymerase beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1413943 4101 - 0.355279
sigA, rpoD PMM0496 Putative principal RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS469063 1191 - 0.34005
spoT PMM0191 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)aseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-diphosphatase, (PpGpp)ase; EC=3.1.7.2; chromosome CDS182880 2310 - 0.3329
ureG PMM0969 urease accessory protein UreGRecName: Full=Urease accessory protein UreG; chromosome CDS925858 606 + 0.343234
zam PMM0847 putative acetazolamide conferring resistance protein ZamSubName: Full=Putative acetazolamide conferring resistance protein Zam; chromosome CDS805514 2220 - 0.256757