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2024-05-04 16:32:29

Gene list

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COG category: Transcription
Organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4

Number of genes found: 50

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PMM1517 conserved hypothetical proteinchromosome CDS1457896 900 - 0.311111
NA PMM1697 Type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS1632707 1020 + 0.370588
NA PMM1493 conserved hypothetical proteinchromosome CDS1430005 261 + 0.287356
NA PMM0994 GCN5-related N-acetyltransferasechromosome CDS946932 462 + 0.261905
NA PMM1640 putative acetyltransferase, GNAT familychromosome CDS1569324 456 + 0.307018
NA PMM0169 two-component response regulatorchromosome CDS163042 729 - 0.329218
NA PMM0154 Bacterial regulatory protein, LuxR familychromosome CDS151577 279 + 0.34767
NA PMM1588 possible Conserved carboxylase domainchromosome CDS1517428 615 - 0.35935
NA PMM1619 two-component response regulatorchromosome CDS1548994 747 - 0.380187
NA PMM0363 possible MarR familychromosome CDS345420 402 + 0.335821
NA PMM0313 conserved hypothetical proteinchromosome CDS300358 480 - 0.314583
NA PMM1637 possible transcriptional regulatorchromosome CDS1564595 972 + 0.330247
NA PMM1559 conserved hypothetical proteinchromosome CDS1487908 471 + 0.333333
NA PMM0909 conserved hypothetical proteinchromosome CDS871171 483 + 0.279503
NA PMM0466 possible secreted protein MPB70 precursorchromosome CDS442853 1701 - 0.277484
NA PMM1574 conserved hypothetical proteinchromosome CDS1502288 447 - 0.308725
NA PMM0357 TENA/THI-4 proteinchromosome CDS341600 624 + 0.283654
NA PMM1289 Type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS1240108 942 - 0.367304
NA PMM1629 Type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS1557272 1002 - 0.353293
NA PMM0714 Bacterial regulatory proteins, ArsR familychromosome CDS680482 381 + 0.267717
NA PMM0868 probable ribonuclease IIchromosome CDS824635 1185 - 0.222785
NA PMM0577 Putative type II alternative sigma factor, sigma70 familychromosome CDS541511 924 - 0.373377
NA PMM1113 two-component response regulatorchromosome CDS1059346 738 + 0.432249
NA PMM0936 putative SOS mutagenesis protein UmuDchromosome CDS894799 387 + 0.284238
NA PMM0839 Transcriptional-repair coupling factorchromosome CDS795015 3516 - 0.281854
NA PMM0562 possible acetyltransferasechromosome CDS529690 531 + 0.348399
NA PMM1101 putative ATP-dependent RNA helicasechromosome CDS1045073 1779 - 0.293423
NA PMM0080 conserved hypothetical proteinchromosome CDS85259 681 - 0.321586
NA PMM1564 conserved hypothetical proteinchromosome CDS1491846 1449 - 0.266391
NA PMM0011 Protein phosphatase 2C domainchromosome CDS13183 1344 + 0.279762
lexA PMM1262 SOS function regulatory protein, LexA repressorchromosome CDS1216278 624 - 0.355769
nusA PMM1492 N utilization substance protein Achromosome CDS1428605 1404 + 0.378205
nusB PMM0009 Antitermination protein NusBchromosome CDS11105 630 + 0.298413
nusG PMM0205 transcription antitermination protein, NusGchromosome CDS197424 612 - 0.356209
petA PMM0461 Cytochrome fchromosome CDS439817 954 - 0.374214
phoB PMM0705 two-component response regulator, phosphatechromosome CDS669400 729 + 0.308642
rbcR PMM0147 putative Rubisco transcriptional regulatorchromosome CDS142916 954 - 0.33543
recG PMM0756 ATP-dependent DNA helicase recGchromosome CDS715992 2457 + 0.266585
rimI PMM0333 GCN5-related N-acetyltransferasechromosome CDS322362 888 + 0.349099
rnc PMM1603 putative ribonuclease IIIchromosome CDS1534329 750 + 0.284
rpaA PMM0128 two-component response regulatorchromosome CDS125358 756 + 0.358466
rpaB PMM0134 two-component response regulatorchromosome CDS132148 747 + 0.360107
rpoA PMM1535 Bacterial RNA polymerase, alpha chainchromosome CDS1475063 939 - 0.376997
rpoB PMM1485 RNA polymerase beta subunitchromosome CDS1420020 3294 - 0.368852
rpoC1 PMM1484 RNA polymerase gamma subunitchromosome CDS1418077 1905 - 0.35748
rpoC2 PMM1483 RNA polymerase beta prime subunitchromosome CDS1413943 4101 - 0.355279
sigA, rpoD PMM0496 Putative principal RNA polymerase sigma factorchromosome CDS469063 1191 - 0.34005
spoT PMM0191 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)asechromosome CDS182880 2310 - 0.3329
ureG PMM0969 urease accessory protein UreGchromosome CDS925858 606 + 0.343234
zam PMM0847 putative acetazolamide conferring resistance protein Zamchromosome CDS805514 2220 - 0.256757