Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Synechococcus sp. WH 8102, WH8102

>SYNW1509 Possible type II alternative RNA polymerase sigma factor
MVSSLSAFLGEIGRHQLLTPEQELMLGRKVQAMVVITEPCQLAGGSGPSC
EYSDEEKAVIRRGERAKNQMITANLRLVVNLAKRYQGKGLDLLDLIQEGT
LGLTRAVEKYDPTRGHRFSTYAYWWIRQGLNRALSTQSRTIRIPVNVNEK
LTKLRAAKARLMQRNGLTPTAEQLADFMEIPIAEVEDLLACELRSVTVSL
QGVVKSKSDPSELVDVLPSDELPPMERAEIAERSASVWTLLGKANLTPKE
RTVVTLRFGLDGTNEWRTLAEVARHMNCSREYCRQVVQRALRKLRKTGIQ
SGLVESTL
>SYNW0317 conserved hypothetical protein
MYAGAAIPVASWNQVRRTMTSPVQASTRDALLSLLLERGDADAADLAGAL
NLSVQAVRRQLKSLAEAGLAEASPSVSGPGRPSNRWRLTDQGRDQFPDGS
QRFALGLLNSMRASLPEETVRTLLNQQAEDKASRYRDRIGNGSLQQRLEQ
LASLRRDEGYVTLCSPEEDGVSWRLQEVHCSVQRIAEEFPAVCDQELVLI
RRTVPDCQVERVHWRLEGGHACGFRITPLQN
>SYNW1487 ROK family sugar kinase
MDDGQAIGIDLGGTAIKLARFDPRGALLAELEVATPQPAVPGAVTMALCD
AVEELDPDGAAALVGVGLPGPMDATARVARVCINLPGWEDVPLAEWLEVR
LQRRVTLANDGNCAVVGEAWWGAAKGFSDVVLLTLGTGVGGGVLLGGQLF
TGHNGAAAEPGLIGVDPDGPACNSGNRGSLEQFASIAALRRLCDRDPREL
SLAAEEGEPAALEVWERYGTRLGVGLSSLVYVFTPQLVLLGGGLAGAARH
FLPAVRREVELRVQAVSREGLRIDACALGNGAGRLGAARLALLRLGGMMA
DD
>SYNW1540 possible acetyltransferase
MTSPLVLPAAPLLEQYGEEARLCSCANDQLTLVFSRRHPFDLVELEQLLE
AVGWSRRPVRRVRKALANSLLTVGLWRHDPRIPRLVGFARCTGDGVFEAT
VWDVAVHPLYQGSGLGSQLMVYVLEALEAMGTERVSLFADPGVVNFYQRQ
GWELEPQQHRCAFWYAS
>SYNW1582 SOS function regulatory protein, LexA repressor
MSWPQSRLGSCAARTPSVQMYCSAPCFVTISSPEPLTSAQQELYDWLAEY
IGTHRHSPSIRQMMQAMGLRSPAPIQSRLRHLQQKGWITWQEGQARTLQL
LGDMAAAAGIPVLGAVAAGGLVTAFDDVQEHLDLAPVLETRGLFALTVNG
DSMVDAHIADGDVVLMEPVPDPQRLRNGTVVSALVAGSGTTLKHFHRKGA
AVVLEAANPAYDPIELPAEQVEVQGRLVAVWRQV
>SYNW2059 conserved hypothetical protein
MLEAQAHSHLKTLLRQGESNWPHHLTLSRLVGRSLRRGDRTLLRLAPNQR
ERWWLGLLMPLCLQSSSAVLVLTAQQRQRLLQVERPRLARQGFRLACWEG
NTPPPQDQLWLLDHAGLIQAHRNDLLGDRQLLLPGIDQLSEQLRRCMAIR
LDASHWEQLRLALPQAEKPLLELHERLSRQLFREAPRVDACIRLDNSACQ
SLRDLLAVMGPCPSPWSELLACDPREWSHWAELDHTMLQWSWCLEPLEPL
QQLQGLLSQRPTLMLSDSGDSARLEQELQEANASPTVTAVLREAELEEPL
PLFAPRRQPLPNTEIYAEHLLEQSRRLILGRPGLTVLLLDDPSLRRSLTA
SLAAEFGTRVQDECTAPEDNGVISGSWSWWLQHLDQLPEPEQIIIGLLPI
ASLTSPITAARVERLKSQGADWFRSLLLPEALRQIPAAVAPLRRSGGRLA
VLDGRLRGRSWGDQVLQRLEPWRPLQRLLPD
>SYNW2289 two-component response regulator
MTDTPLPSTDEQEAPPPVPRLLLVDDEPGLRTAVQAYLEDEGFEVTTAVD
GEEGFSKAQQMLPDVVITDVMMPRLDGYGLLKKLRADERLGGTPVIFLTA
KGMTADRTQGYLAGVDDYIPKPFDPDELVARVRNVAQRQQRLLQEAARFA
DTDMGQMAKQITEIRSLLAQAEALPSKEPVVHSFTPREASVLQLVAEGLM
NKEIARQLETSIRNVEKYVSRLFNKTGTSSRTELVRYALEHRLVT
>SYNW0623 conserved hypothetical protein
MSHFSTVKTELRQLEPLVQALKDLGYLPDQGERPVRGYRGQTVTADLAVA
MDNGGDLGFRLNEKTGAYELVTDLDLWKQTIPVERFLSKLTQRYALNTVL
KASGIEGFQVAEQQVKQDGSIELVVTRWDV
>SYNW0964 possible LytR-membrane bound transcriptional regulator
MTPTQPKRLMPWLGRHPLRTVLRLAAAVVGLGATGWLLSTVWPEPDQVAR
TEPVAADNPTNLAPLPLGPVTLLVVGIDADQTNDPVNNAAPRGRANADAV
MVVQIDAQQPLRVLQVPVELALQLPGQTTPVKLGSIWQTGGVALLSDAIR
ELVGLPADQPHRYVVVPRRVLRSLVDGLGDLDVILNASFQRTDKAQNYTV
NLQAGRQSLNGAQAEQLARYLKDSLDDPNRRLRQQLLIRAVVEQFKGPGV
MGKIPGLVDVAASAVETNLSNPEMLSLAAAVLSSPSSVNIQQLPLAKRAG
KQVLRQIKAGEPLPLWPRL
>SYNW2362 SNF2 helicase homolog
MSLLHATWLPAIRTSGSSGQPALLIWADTWRVATPEGPGLTPALHPFTLE
PDDLKAWLQERDLLPGGSIDATACLTLPSRTVKPRKSRSKTAEPAPEEPI
WTGLPMQAGEPIPKQTEWWPWQVQGLAVEPSAATEWLSRLPLSGRNPDLA
DELRWWSHLQRWALSLVARGRWIPQMELSKGEGYPHRARWVPLLNREEDR
RRLEDLAASLPLVATCALPWREPMGRRSNRMTRLRPEAMRAANPVACCRP
RSGRLRVATLLEDLVDAQLRKDFEPSTDGLDPLLTLWQDALGSETGVIEI
GDEQAERLASASFHWREGIAGDFAAARTCLELQTPAEGEELWELRFGLQA
ESDPSLKLPAAAAWASGADQLQLGEVTVEQPGEVLLEGLGRALTVFPPIE
RGLETATPDTMQLTPAEAFVLVRTAARQLRDAGVGVDLPPSLSGGLASRL
GLAIKAELPERSSGFSLGESLDWSWDLMIGGVTLTLRELERLSGKRSPLV
RHKGAWIELRPNDLRNAERFCGANPELSLDDALRITATEGDLLMRLPVHR
FEAGPRLQAVLEQYHQQKAPDPLPAPEGFCGQLRPYQERGLGWLAFLNRF
DQGACLADDMGLGKTIQLLAFLQHLKAEQELKRPVLLVAPTSVLTNWRRE
AEAFTPELAVREHYGPRRPSTPAALKKALKDVDLVLTSYGLLQRDSELLE
SQDWQGVVIDEAQAIKNPSAKQSQAARDLARPAKGNRFRIALTGTPVENR
VSELWALMDFLSPKVLGEEDFFRQRYRMPIERYGDMASLRDLKARVGPFI
LRRLKTDKTIISDLPEKVELSEWVGLSKEQKSLYSKTVEDTLDAIARAPR
GQRHGQVLGLLTRLKQICNHPALALSENAVDDGFLGRSAKLQRLEEILDE
VIEAGDRALLFTQFAEWGHLLQSWMQQRWKADVPFLHGGTRKNERQAMVD
RFQEDPRGPQLFLLSLKAGGVGLNLTRASHVFHIDRWWNPAVENQATDRA
YRIGQTNRVMVHKFITSGSVEEKIDRMIREKSRLAEDVIGSGEDWLGCLA
GDQLRNLVALEDT
>SYNW1385 possible DNA-binding response regulator
MELRLDSRTTQEAIAQAAELLEHRRLVLVFGDRLTLSALAIAEPIKPSLV
GAATTEDEGLELVLRTQPDLLICSSDLETGYGPVLLKRVKAELPTCQLLI
VLERETKALVREALDAFADGVIFKSSLGTGRGDLIGALHTLADGGVYYPA
EIRRLAAAAPQPDLPPLVEELTQRELDVAAAVARGLKSNAIADLLGISLE
TVKTHVGNAMDKLGARDRTQMAVTALLYGLIDPLD
>SYNW1973 possible transcriptional regulator, luxR family
MVSDIPLTPAEQRVSALLLQGLSNRAIAERLVISHRTVECHISRALAKTG
CVNRLELALRMLTMPSTPA
>SYNW1598 possible two-component response regulator or pseudogene
MTADPLLLLVGASAVALAPRLAASGYSTVDWLSAGVASSTVQVGEEPLAA
VLAADQAAKVRDLRQRFRGMPILLDLEQDSVDARAACLCAGADDFWLSSI
APSDLLLRLRLHRTVQARLGQRPTLLELGDLSLDPATRHVRRAGRTVALT
AREFALLLVLMRSPGEVFSREQLLQEVWQDERASSNVVEVYVRYLRQKLE
ADGESRLLLTVRGRGYSLGPVVGDG
>SYNW0273 conserved hypothetical protein
MSHLVGLDPGRAKCGLVLVDPDQRLVLDGVVLPPSRVISQLKTWSNQGEL
RLILLGNGTSSEQWNPALQRLASVEIVEERGTTLRARDRYWQLWPAKGWR
QMLPRGLRLPPGELDAVAALVMVEDHLGHQCQWPQSRPAFKSVPAP
>SYNW1875 two-component response regulator
MDIASDGATGLIRSRSEPAPDLIILDWNLPDFSGIDICQRIRAGGICTPI
LMLTGHEEVSDRVTALDAGVDDYLIKPFSIDELMARLRAMQRRAEAFSGR
NEPGQEAVQLRVADLSMDTRTRDVKRTGRSIQLSVKEYDLLNCLMRGSGR
VLERQEIMRAVWGENFYGDDNLLDVYIRYLRKKVESKDAPTLIHTVRGVG
FILREESN
>SYNW2493 conserved hypothetical protein
MPLRPIGSADHPLLREIYADAIESQAPGLYSSDQVRAWAALAWLPGILDR
TFLEGQGWISGHDAAFAIREPRDRLSLLYCRGRACRQGHGRALLDQIEAD
ARHEGVERLRTEASQLSRPLLERCGWRVQAPETISIGGVPFKRYRMDKWL
LQDRS
>SYNW2268 possible transcriptional regulator
MSSSDPSDPLNISLSAREIEIIELVAEGLTNQEIADRLTISKRTVDNHVS
NVFTKTGSKNRVALLNWAMDNGKICRDGFNCCALPDADGPE
>SYNW0926 similar to membrane bound transcriptional regulator
MAALLSSLRHRPLWQVCGLGLAVGLLVSVPLARRHPLAGWWGLGIGEVVV
LGQDAGGSNTDTIFTLKVKPGSTRITQIPRDSYINPDGFGAMKINGLLRR
GGPEAVERELTRLMNRPVRHHVVVSLQTLPLLANLVGGIEVDVPKRLYYV
DRSQDLVIDLQPGRQVLSGKALEGFLRWRNDGYGDFGRLERQQLALKGLA
NRLRQPQNLLKLPLLLGVVRTQVQTDLNPLQMAGLATGLICTDLDAHRLQ
ARPFSRGGISYLETTWPN
>SYNW0798 Putative transcriptional regulator, ArsR family
MQNTLTTEQSRQTLKALADPTRLDVIHALAEGERCVCDLTADLGITQSRL
SFHLRVLRDCGLLTDRHSGRWTYYRLQPDALSALEDWLAALRQHCSRSAP
LCSD
>SYNW0039 possible helicase
MGDLISDSGSLSCGLDLSAAGLIRVVCPFDAVTQAQLRRIRPRGSWMGPS
RGWEFPLAAAAALIQGFGTRFPVTPQLQQWLDWCHHPLPPLPPHRDLVAA
ADLTMALRDGRRPLPHQRSGARWLLARRGAVLADEMGLGKTLTALLAARA
MVRCAELRVMVVAPVGLHAHWRREAETVDLQPELVSWARLPAELPPAGTL
LVVDEAHFAQSLQANRTAALLRLARHPRLRAIWMLTGTPMKNGRPAQLYP
LLAAMDHPIARDQRQFEERYCQGHWREQRGQRRWQASGATQLEELRRLTR
PLILHRRKAQVLELPPKQRREHPIALSDAESLGFDHRIDLLVDDFRRRAL
KGEVRSDAEPLAVLTALRRVAAEFKLPAAETLVRTLLQAGEAVVLFSGFV
EPLQLLQQRLGGALLTGRQRPVERQQAVDCFQQGGEDLLLATFGTGALGF
TLHRARHVVLLERPWTPGDVAQAEDRCHRLGMEDEVLTCHWLQLGPADQL
VDGLVASKAERIEILLGPRRLTLERQSLPLMVRRCLQVA
>SYNW0102 Type II alternative RNA polymerase sigma factor, sigma-70 family
MAPAAATASKPATSARSVSVDVDLVRSYLRDIGRVPLLTHEQEITLGRQV
QDLMDIEAMQTELESRDGDKPSRDKLAKASGLTPLQLKRKLQHGRRAKER
MVAANLRLVVSVAKKYTKRNMELLDLIQEGTIGLVRGVEKFDPTRGYKFS
TYAYWWIRQGITRAIAEKSRTIRLPIHITEMLNKLKKGQRELSQELGRTP
TITELAQYVELPEDDVKDLMCRARQPVSLEMKVGDGDDTELLELLAGDAD
LPSDQVEEDCMKGDLRSLLGQLPHLQEQVLRMRYGMDGEDPMSLTGIGRI
LGMSRDRVRNLERDGLAGLRRISDQVEAYVAS
>SYNW1984 conserved hypothetical protein
MQCPSYQNTDSRVLESRAADGGRSVRRRRECLNCEFRFTTYERVETVPIT
VIKRNGNREIFSRSKLLHGLNRACEKTGLDASRLETLVEELELKLQQRSG
REVSSAEIGELVLVELKQMSEVAYIRFASVYRQFQGIDDFVSTLETMNRK
AGPGHLAAVG
>SYNW2427 Possible type II alternative RNA polymerase sigma factor
MAKGFALQFAEAVDAQQAKHHPKEPVQSIACAALAVDRGTPRRAVGTAGY
SHLAQFEPCVNRADPEGIQRFCRTDDGCGEPCRQSNCSTPLPRQPRRTGE
TRDRRSRSTTDLLRLYLQDIGRVDLLTNEEEVTLARLVQRREALLQQQRD
LATSDAAIGELYRLEELQRREANQHSHWPTKQEWARAAHLSLAELQQRIE
AGYGAWAREANLEARELKTALRNGRRAKDHMIQANLRLVVAVAKKYQQRG
MELLDLVQEGTLGLERAVEKFDPTRGFRFSTYAYWWIRQGMTRAIATQSR
TIRLPVHVTEKLNRIKRAQQEIATNEGRIASIADLARALKLSEDTVRQTL
ARVPRSVSLDTRVGRDQDTQLGDLIEDGKATPEQTLTHDELHNDLEHLLD
ELTSREAAVLRRRFGLEDDTPQTLAQIGEALKLSRERVRQIETRALLKLR
QPQRRSKVRDYIQGLDS
>SYNW0808 two-component response regulator
MSKTSMVWVVDDDPELRKMVGTYLIDQGYDVRCLCDVKQLEARLECQRPD
LLVLDVMLPGDDGLTALRRLRDAGDDLPVVMLTARGDAVDRIIGLEQGAD
DYLGKPFLPRELTARIDAVLRRRMAMPAGTPLVDGEQVHFGENVLDLSAR
TLMKGGTAEIITSGEFSLLAAFAQHPHRPLSRERLIELARGPGSDTDSRS
MDVQVSRVRKLVEPDPTRPRYIQTVWGYGYVFVPDGTPRSH
>SYNW1164 conserved hypothetical protein
MLLRPASLAIDSTRRRTAGRTKNGTSFFKAAKASGCQSMGQSCSTPRPYL
APSCRNQAPRWAVAEPETTNAEDSCFSTMTTSGWQRRELRRALPPAVRQR
NIKVLNHLGIAGMIASRQTRRGPKERDDLEQEARVGLIRGWERFDPRRGL
KLSTFLSTATNGQVLHFRRDRAVTIRVPWLFKLPSDSLSFAPYPLPGMDL
VCRSLLICQCWYEPLYQADTRSARIGASGLNEYSLVFQ
>SYNW1177 Transcriptional-repair coupling factor
MPLRSLVTQLRSAALTGELLQRTERDARLLLRGAGRISRALVASALAQKE
GRPLLLVVPTLEEAGRWTALLELMGWSSASLYPTSEGSPYEPFDPTSEII
WGQLQVLSDLIGTDDPAGKAIVATERCLQPHLPPRQALEATCRTLKKGDE
LDLDELAETLARLGYERMSTIDQEGTWSRRGDIVDIYPVSSELPVRLEFF
GEELDKLREFDPATQRSLDPVDRLQLTPTGFSPLVADQLRESMPEGLDRL
LGDEATEELLEGGTPEGLRRLMGLAWGQPACLLDYLPASAAVVIDERRHG
VAHGQQWLDHAIDHYSDMASELGLSEEERDLLWPAVLQRTIDKAYGLAEA
FHGFDMAELLEEDGHPNSFDLASRPMPAYPNQFGKLGELIKGFQKEKTAV
WLISAQPSRAVALLEEHDCIGRFVPNPADAPAIERLIEQNTPVALKSAGT
AELEGLQLPAWRLALVTDREFFGQQTLGSSGYVRRRRKAASRTVDPNKMR
PGDFVVHRNHGIGRFKAMEKLAVSGDVRDYLVVQYADGLLRVAADQLGSL
GRYRATSETPPQLSKMGGAAWTKAKERAKKAVRKVAMDLVKLYAERHQAN
GFAFPSDGPWQNELEESFPYEPTPDQLKATADVKRDMEKAEPMDRLVCGD
VGFGKTEVAIRAIFKAITAGKQVAMLAPTTVLAQQHWRTLSERFAPYPIK
VALLNRFRTASERKTILEGLKGGTIDAVVGTHQLLGKGASFQQLGLLVVD
EEQRFGVNQKEKIKVLRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTP
PPLRRPIKTHLAALDPEAVRSAIRQELDRGGQVFYVVPRVEGIEDVAAGL
REMLPGLKLLVAHGQMAEGELESAMVAFNAGEADVMLCTTIVESGLDIPR
VNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGNGSLSDNARQR
LRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMETIGFDLYMEML
QESLAEIQGQDIPSVDDTQVDLPVTAFVPADWITDPDEKIAAYRAAADCR
SGEALVELAAGWADRYGALPAAVQSLLQLMELKLLAKRCGVARIKPEKPN
IVLETPMEEPAFRLLRQGLPQHLHGRLVYQSGKALQHKVMARGLGVLPMD
KQLEQLMEWLRLMAAQIPDADGTTEAQRLEAEGQRNEAVLQV
>SYNW0126 two-component response regulator
MSGDVLSQPKATVLVVDDEAAVRRVLVMRLQLSGYRVVCAEDGEQALELF
HSESPDLVVLDVMLPKLDGFAVCRRLRAESCVPIIFLSAVDAISEKVAGL
DLGADDYLPKPFSPKELEARISTILRRVGRGAAEIESRELPTGQGVMCIG
ELVVDTNRRQVTRGAERINLTYTEFSLLELLFREPGEVVPRAEILEQLWG
YPPRRAADLRVVDVYVARLRGKLEPDPRNPELILTVRGIGYCSQRLGETA
ATA
>SYNW0599 conserved hypothetical protein
MSQHPILRRCVACRQLLDRRSLWRVIRDHQDGVRVDGGMGRSAYLCQREA
CLEEARRRKRLQKALRCQVPDDVLAALEQRLRNATDVTAEAN
>SYNW0904 two-component response regulator
MTSTPRDLTVEPSAPSADPLILPQSGTGQEPSRVLVVEPHPTLRTVLVQR
LRQDGHLTAAVGRASEALEVCQDQSPDLLVSAEILEQGSALRLADQLRCP
VIVLTARSGADPVVGLLDDGADDVLRKPFGLEELAARCRTLLKRGHNGLQ
ERVTVGPLEVHLLLRQVTLRDQPVELSPREFALLCALLMPPGLVRSRQEL
LRMAWPPFSGGPRSVDTQVLTLRRKLEQAGLGEGGGITTVRQRGYRFSLD
TLPAS
>SYNW2105 putative transcriptional regulator
MTGLSTSTIYRWMTDGTFPKQIQLGSRSVVWNERDVIDWMNAQNANT
>SYNW1838 similar to secreted protein MPB70 precursor
MAQQSRKPPERRVSSTARLQLMDLTTLRAVLSDLRPKLLPSRFEKAQQPD
PATLQLGFRSLQGMLWLELSWQADAPRLVQIPPAPRQGAGSTLSQQIQHS
LRQMALIELVQTGFERVVEFRMAPRPGDAVQRVLVLELMGRHSNLLLLGE
QRQVVALGRQVRDHQSRVRPIGTGDAYLPPPPLQGQAPSSTEGFERWRER
LRLLPLPLRKALPQAYQGISPPLARQLAGERLATSVEQLEQSAWCELHRH
WQAWLACLETEQFRLFLDEEGYRVWSSHPDQSGDAEGNEGNLALALGHWY
RARIDQRDLQRACDELRQRLSRWRSKEDLALEDQRRRLAACADSTDLQQQ
ADALLCLPAPNRDEVDLAQKLYRRARKLRRSSTVLEERILHHDSRLQLIN
GSEAFIDDLQAAAWQPMAARLEALSDLRRELDELLNPVGRQERKQRQQQG
TPQPLELTSPSGLLLQVGRNHRQNDWISLRQARSGDLWFHAQECPGSHVV
LKSSAGLADDDDLQLACDLASYFSRARGNVRVAIVMVPTDHLQRIAGAGP
GTVRHSGGEVRWGDPLRAETRLSSLEASSLAIRKG
>SYNW0091 conserved hypothetical protein
MRFHIQQESDIPASTQLYNQICFAIAARHYPPGHRLPSTRQLAMQTGLHR
NTISKVYRQLETDGVVEAMAGSGIYVRDQQKPREIKTPPHIRNRGVTDLD
REVRKCVDGLLNAGCTLQQTRELLTREIDWRLRCGARVLVSTPREDIGAS
MLIAEELEPSLDVPVEVVPMEELESVLESSSNGTVVTSRYFLQPVEDLVK
KHSVRAVAVDLNDFRHELAMLKELRPGSCVGLVSISPGILRAAEVILHSM
RGNELLVMTATPDVGSRLLALLRASSHVLCDRPSLPLVEQSLRQNRSQLM
RMPQVHCAESYLSTDTIELLRKEIGLQTPAAAS
>SYNW0987 conserved hypothetical protein
MTLQTPASFNPELATWLSQQGISLALSTYRANRLIFLGVDHSQTLRVHER
LYDRPMGLFTSGQSLWMAGRSHLWRFDNLLAPGQHHDGADRLYTPAASFL
TGEVNAHELVLTAEGAPLFVNTVFSCLAELTPGCSFRPVWQPPFIDALKP
EDRCHLNGVALKNGEITWATACSAGNTPTSWRNTRQEGGVVVHIPTGSIT
TRGLTMPHSPRWYQDKLWLLNSGTGELGWIEQERFQPLCTLPGFVRGLAF
AGGCAVVGLSKLRSPQFTGLPLEESLQTSGQPKGCCGIRVIDLASGNVLH
SLDLPEPIDELFDLAVLENCRQPKALGLVDDAIDCLVKLPQQDNLVRIKP
SIPSGTPHQGPAVERLGLPQPTPADGTAVHYQRVFQLTEATLAPFASLTY
PSLAPGSAAWRKLKGELLGIAANQNGTLVGLALAECTPEGNARLVSLCVS
PPQRRQGIGTRLIAHLSVFLTQQSQTSLSVSYQAPHRQPGPLDRLLPRLG
WSPPRQTFLLLEGQAAQLASMNWPERFLFPAGYQLVPWRADYADVAAQFP
AGDNLTAAMQSSQLEAQASLALLHHGNVVGWVLVDRTSANATRISSLFVA
KGHRPRGQALTLLVHAFRQQHAAGIPIARAAVAPHSQAMLRLVDRHLGAH
LKSVTSARSSQLTLKTAGAQQR
>SYNW0977 conserved hypothetical protein
MGLIQTLQSRLLRYESTALRYRQAYFSAARNLARAQFLLGDAELSQRLWQ
DVADRGLDVERIEQLMYGCWFQDDPDAMAEADAAYLSRTAPHESPGIFEH
C
>SYNW0010 NusB family protein
MATRSLARELALLVLGQVSDQKPIPAANLAMDSVLEQALDSLMQHWRESL
DASAAELEQAQQSLLDSELQSGESAALPTGQDHLRSCLTMAEQVLNGLSA
SLELPRLLMLGDQEQIRHGAMDRVSCVLNKRDRIDAELDSVMEGWRLSRL
PRLDRDILRLAVVDLRDLGTPAPVAFSEAVELANRYSDEQGRRMINGVLR
RFHDAASKAVG
>SYNW0012 conserved hypothetical protein
MSSKPPRRHSTPSFRGVAPPPQAMASLRQLFDSLSREQRRNQDLLVSLAF
AQRSFTNLNRFLELVPVVASRLVGVQGAILVPFQSDGRLWREQLQAVPAE
SNQDLLQRLAAFEPGHGAGFGTDDDQLLLMDRLVQRLCPGAGLFATSVVA
RGRSRGRLYVFEPSGDLVWTDVHRRHVQLVADLAGVAIENDQMLQEARRH
ERVDRQLSIGAEIQAQLLPDHCPVIEGVELAARCRPAFQVGGDYYDFIPT
RPELTGRRRERGRWALVMGDVMGKGVPAGLLMTMLRGMLRAEVLSGLPPD
RILHDLNQLAQEDLAQSHRFVTLFYSDFDPRSRRLRYANAAHNPPLLWRA
ERRSISRLDAAGLLIGLQPEADYGLGEVRLDPGDVLLYYTDGVTEAPGIT
GDRFDEARLIRTLEGACRSGQGAQGILDHLFDRLDRFVGADHHLEDDASM
VVLKVPEAVSLPSVSPSISRLTS
>SYNW2370 conserved hypothetical protein
MDHQRGFQQGEHQGECKAELALKVIQGRWSVLILRELVDGIQRFSDLQRA
LEGVSQKVLTAQLRDLEADGVVHRTIHPEVPPRVDYALTDLGIELLPVLD
GLHAWGERQADFNAASR
>SYNW1879 similar to chloroplast membrane-associated 30 kD protein
MVLPFPMGFFDRLGRLVRANANAAVSSMEDPSKILDQSVADMQSDLVKLR
QAVALAIASQKRLRSQAEQASSQATTWYERAELALKKGEEDLAREALTRR
KTFQETATSLNAQVQSQDGQVETLKKSLVALEGKIAEAKTKKDMLKARAQ
AAQAQQQLQSAVGNIGTNSAMAAFERMEEKVEAMEATGQAAAELAGADLE
SQFAALEGGSDVDDELAALRNQLKGGPESVALPASEQSQAVTPVKVEEVD
ADLEDLKRSIDKL
>SYNW0732 conserved hypothetical
MSLSQLDQFLSLRESNPLLSQRLASPLELEDFLQLAREWGFQLTESDVLA
AQKRAMDQGSAAALQRAQAEESRRLRNFIHG
>SYNW1423 conserved hypothetical protein
MVFCLDPSSRGIGRSISSAPSLFTPSVRAGIGIDADDFRLSPTASSDRFS
FHLLRPDSPLIAGYWSLRRSIFCEEQHVFEQSDRDELDRIACPIAALHHD
CQPDEDKQGPESQVVGVVRIVETEPRLWYGGRLGVHSDFRRHNQIGKGLI
WKAVTTANGWGCDRFMAMVQIQNVRFFRRLHWASIEELEIRGIRHHLMQA
DLNYYAPSRERRPSCSLLPSLAA
>SYNW0920 probable ATP-dependent RNA helicase DeaD
MNDQQLGETPCAVDLSASSLPEQATSEQGSADVFTTTIDAQQPESGFDGF
GFSEALLKTLADKGYSEPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFA
LPLLERLASGQKTPQALVLAPTRELAMQVADSFKAYSAGHPHLKVLAVYG
GTDFRSQINTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLRSLVLDEADEM
LRMGFIDDVEWILEQLPQERQVVLFSATMPPEIRRLSKRYLKDPAEVTIR
TKDQEGKRIRQRSITVPMPHKLEALQRVLDACGGEGVIIFARTKAITLTV
AETLEAGGHQVAVLNGDVPQNQRERTVERLRSGSVDILVATDVAARGLDV
DRIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAVLFVTPRERRFINNLE
RATGQPIEAMEVPGNSAINQGRLDRLHKRLSEAAHNERSYEEEAALLKEL
LQRIGTELELSPEQLAYAALSMAIGPDPLLRQKGDDEWIHNNQRRDRDRD
RDRGGERRERRSDRPARAPEENMQRYRVEVGHRDRVKPGNLVGAIAGETG
LQGRAIGRIQIFDNHSFVDLPKGMPEDVFNSLRRLRVMNRELQITQAS
>SYNW1069 conserved hypothetical protein
MLASTKLDRHRGSPMDRQQSDWPEQALTSSRDLHAMLSIDDRSWHRLKSR
WDRRGAELLGAALVKLLSDGERDDVKALTEQALGWISGELKDPGCPHH
>SYNW1044 putative SOS mutagenesis protein UmuD
MDVRHQPLPLQPRRTRLSLPLAGERVAAGFPSPADDYVEVGIDLNDQLIR
HPTSTFFLRVSGESMLGAGIHDGDLLVVDRSLDPRPGRVVVAVLDGEFTL
KRLVQHHGRLRLEAANPAYPPLELHRCGDVQIWGVAIHVIHPL
>SYNW0566 possible two-component response regulator
MRETLRRSRSELKRRRIVIASADRVLITSLVGLFDGIGPLLGACTSEADT
LTCLERSAADLLICTDLLESGDGPSLVQHARALRPELICLMLIQRPLRST
IEAATAAGCQGLCSRELVGNGHLLKAIQAIDSDALYIDPVIAGVLRHSRL
SRGHTSTSLNPELTVREEDVLRGICRGLSNQEIADQLNLSIETVKHSVTA
VLSKLDARDRSQAMLIAFRNDLVDLPARLPRWTP
>SYNW0689 conserved hypothetical protein
MPLHTISPYSFDVGSSGSVSAIQPRQWQTQLIQLLRRRLDGKATGEKDVL
VSAGPGAGKTLGALLAFRSMRQEQLLQHFLVFCHRTSILEQWQRSAARVG
LELVSWPCEQKTLSQADGLLLTYQSASRQPQQLATALDPWPASTLIAIAD
EAHHLGLDPEEPGAAAWSQTFEEQTSQCRLRLGLTGTPFRADNLGFCAAR
RIRTIQNGELVEQIQPDLCVEPRELIAAGDVRPLEFHFQDGWVEHSQEAR
PDRDVSPLSQEQRESWRARNLRRAIRLADSSCIGQQVILQAQRRLARVRQ
QQPNAAGLVIARDIEHASAIATLLEDDGDRVDLVHSQDPEAAARLDGFQA
GAADWLVSIDMCAEGFDAPRLRVVAYLTTVVTRSRFLQGITRAVRMTPEL
AEQEPIPRNPSYVVAPADPLLMGYARSWSVAEPYVLTSQDSDQAPLSGFP
GHGRGPSLPLEAVNDGAGAMIRLKTPQLPSFLQR
>SYNW2496 Type II alternative RNA polymerase sigma factor, sigma-70 family
MGIPLDSSGSTAKSSRKSPALPSTGRRASTRQGGRLATDSIGFYLSSIGR
IPLLTAAEEIELAHHVQEMKQLQELPEEELTSRHRHKIRMGKRARDRMMA
ANLRLVVSVAKKYQNQGLELLDLVQEGAIGLERAVDKFDPAMGYKFSTYA
YWWIRQGMTRAIDNSARTIRLPIHISEKLSKMRRISRELSHRFGRQPNRL
ELASAMGIEPRELEDLISQSAPCASLDAHARGEEDRSTLGELIPDPNGEE
PMEGMDRSIQKEHLGGWLSQLNEREQKILRLRFGLGGEEPLTLAEIGRQI
NVSRERVRQLEAKAILKLRLMTDHQQAA
>SYNW1186 hypothetical
MHAELHAIVDQVEAADPSKRPEAKALSDRVDALAQLHDAAEHHLVAKTPW
HERNILLRAQAGELGLSLTGKDLAAVVATARANLRGESEGISPDDVFKIP
EERWLAQDLIAARTLTLVVALQKVGKSAVVCNILGELAKGRGEFLERFSL
APPCPKVIIVGTDQPLADWREVMVPNGLMIRTDLDNYRVCDPVVRLYTRE
HGLHLDEAGIEKITADCEQNPWAVLVLDAFLSLIGPLGLDSDSDAAVQPL
QNLLESIAPFNITTVLLHHSSKSRAHERASNASAGRGLSRMASHVVNLHW
LNPDAKEDNWVRLTTEGRSSKSVDCVIEQVDRAIWSCHGDSNTISEQLDL
SKVRAKLTERHSEVLSLVEEHWMLTSRAMEPAEVAKAMAEELGDNARQKA
LQALDALANKRLVEKLTRSDHKRGKVVSFQPLKSRRCA
>SYNW1380 possible DNA-binding response regulator
MDLTPYLQQQPKTLNDEPLLSVAMTGKIALAMKGRFFLRCFCESLTERAQ
IGCAVTDEVSCLDYLKQDTFEFLLCTDLLERGNGFELVRKARELQPDLKV
VVLALSDAIPVGYDSAPWLEAVVAEADIIEDRKPLEAAVLAVMGHHSYRS
PSLRSDELPYLSCPRLTPREYEVLDRLARGMSDRDIAEDLVVTEETARTY
TKRLLRTLEVNNRVQAVLKGMRCGMVQI
>SYNW1232 Possible type 3 alternative RNA polymerase sigma factor
MALTTDGMQCPDIHLFMSNTTVQRRNQQVERHLYLAERLARSFSQRTGLD
HDDLYQVAVLGLIKATKAYRSETNVPFEAFARVHARGAILHYLRDSVALV
RLPRRIEEEAQRLSQIHQPKNSREEWVQALYRSKNRWLPCPEEQQAQSNS
GITMMVNAERRDAIQLAFSQLGDAEKHAVKAVVIDGRSLRNVGTSLGVSA
MTVQRRVKKGLKQLKLRLGSLQTAH
>SYNW0464 hypothetical
MNLSVVSAKEQVTIPKAVLEALGLKAGDLVSLELEGAPVRLRLVSGGDQA
YPQSLQSGLTEWASEADEAAFADL
>SYNW1592 Possible AraC-type regulatory protein
MVCKQRLQRLAVATNEQRALDRINSVNSAAVTPELFQRLVELTKPQHHDP
IQAELIEAELLELLSNRRLSQINSGELSHRAGLMKDLIAWGQGNPTQVIS
LEDITTTIFASRSSIVHSCRASFGMGPMTLLKQIRLGQVQAVLLNPQRQA
SMGFITVQAVATHFGFSSRNHFARDYRQLFGEAPSETLQRSATPGIRSHP
VSVAHRPQMAMARR
>SYNW2163 conserved hypothetical protein
MWDPRSPGGRGRLDGGWDLGTMDSRALLIGNSRWHWATQRGERWSFDHAA
PDPRWIDTTNLIWAAVGEVPAALEGAQESRLQLENVPLEGCPPWLGVDRA
LGAWGAWRRQRFQGGDLDQGLLLADAGTVLSLTLLDAHGRFRGGRLMPGL
RLQLQSMASGTALLPSVARQQRTDDLFPSGTAEAMCQGVMQGLAAAVVDA
YQNSGACLWICGGDAPWLEQELTRRGVSAQTNQNLQLQAMVDLIPVIKPV
PGR
>SYNW2173 conserved hypothetical protein
MTMAGHAAALYERIRSNPEQTQALFRQALQDPSGAMASICQFGEDQGLPV
TPDEVRQHLASLDDEASPRWVVKARGGL
>SYNW0643 hypothetical
MIPDPYTQSIMQKALEAHMTSSLCLSVLIGCPASPTLLPENPCLIINAES
IDRKELIAQESFCAHYRELSADDVVLLNQTVISELDHQIVEWHSFSDRRF
NGPSQLSEFSEQYPNLRLVESRKIEGITLSTVLVDQKSLSDPLSTFELIL
REGDPLVVLQSAKEWLARCTRITLRGLVTSSKSREAAEAFLGASGFCKSS
VDSCVWTPELEVSSLHLSLIRCGLLALFNADVYRELYPQTQEMTDVELID
HWLSQPDFRDVSKIMKDATQRNPTPLAELTDQDPALQLLQNIFPFDFYRS
QRTDLSQIPNRELINHYWTHGQYEGIDLSESNVKNVLGKDQSLQVNRLNT
RIHELEHLLSCANAQISAMQKLIVSSRDSGATNEQY
>SYNW1314 conserved hypothetical protein
MLIYVCSSSHGFGHAARDAAVLQQLRRLRPDWRLVMSSIVSPGFLSLLLG
DGGIEQRPCRWDVGMVQADALGSDPSATLIALAELDARLPEQIQSEVSWL
REQGLPVLILGDIPPAAALLAEALDAPLVWMSNFGWDAIYRPFGGAFELM
AERAQAAYRCGQLLLRCPFDLAMDWGLPEQRLDLVCGTPRALPDALKAFL
ADMDSPIIQVGFGGMGLELDPQLFVHWPDHHFLMACPPDPQTSARLAGIA
NLTLLPAGVRPMDAFPYCERHIGKPGFSTFCEALSLDLGLHVVVRRDFAE
VSALMQGLTRHGRHRLLSRDQLMGSDWQLDQPLLPAEAEPLSSGGALQAA
EQLVRVCDQLCY
>SYNW1224 probable ribonuclease II
MIASALASDFQTDAIVGVLLKGQPLIGRLLSCKGSKAVLAFGGQRRDQEI
PLRELVPCGELSDSVRRSVLPTPDQVQSIVLSPRVSAEAWWLLVSDVTDD
TLPCISLSDLTDLLVGRPDLIALAAVWSWLNGPQIWFRLRRDRTLQARPL
NEIRQQRLKQRREHLQREHDLRQLALLQESAPLTEQRRELLDPTWSDRLD
QLLELVHGPEADLGEMPGLGLLQLLGLPPDRKALKTWLVARELLDPHQPS
ALRGSAWSSQLPEANAEIIDELLARAADSCSGDDTRVDLTAQRVYTLDDS
STKEIDDGLALEPGDGGPWIWIHIADPARLIEPDSPLDREARRRATSLYL
ANGVLPMLPLKLATEIFSLRAGQRCPALSVGVLLDDEGAVVASSCQRSWV
QPRYRLTYEDGDELIELVPPGDEDLAQLSALLKRRFNWRQRRGAINFERQ
EGRFRRGAAGPELQVIDPSPARVMVSEAMLLMGAAVAEIGRREGMALPYR
SQPPAELPSAQELAEIPEGPARDAAVKRCLSRGLQGTSPMPHFSLGLEAY
VQATSPIRRYADLLAHRQLIAWIEQRSVMSEPLLREQLDSLEDPLRQSIQ
ISREDQRHWQQVWLEQHRDQQWSVQFLRWLRPQDRLALVHVPDLAMDLVG
YADGEDPAPGQLLTMTVLHVDPDRAELKLRFQ
>SYNW1660 possible transcription regulator
MTGLSISTIYRWMTDGTFPKQIQLGSRYDVWNERDVIDWMNAQNAST
>SYNW1665 conserved hypothetical protein
MTGLSRSTIYSHMSQGLFPKQSKVGTRIAVWLESDILSWIEQTTKQ
>SYNW1621 Type II alternative RNA polymerase sigma factor, sigma-70 family
MVSTAQKPTDSQRRRSSDPVSWYLATIGRIPLLTPAEEIELGNQVQAMMT
LTEDGSKTFEDHELTGKQRRMLRIGRRAKERMMKANLRLVVSVAKKYQGK
GLELLDLIQEGSLGLERAVEKFDPTRGYKFSTYAFWWIRQSMTRAIACQS
RTIRLPVHLSERLTTIRKVSLDLAHKLGAMPSRVEIAEAMDIPLDELDSL
LRQALTTSSLDAPVNGEEGRSFLGDLIADSSLDEPLDIVEQRIHHEQLGR
WLSHLSEQEQHVLKLRFGLEGNERHTLAEIGRLMDVSRERVRQVELKALR
KLRNLTRRLPSGI
>SYNW1294 conserved hypothetical protein
MSTPSLAAQIEAIMYLKGRPIGLNELSDLARAEPQGVQQALLALSASYAQ
RDTALEIVEQNGRFGLQLRPALADLVQNMLPVNLSTATLRTLATIALKKR
ILQSDLVDLRGSGAYDHIKELLAQDFIERRRQSEGRSYWITLSEKFHRTF
SVLPDLAQEPPAEAA
>SYNW0080 conserved hypothetical protein
MVRPPKLERILPWTGPSPGRMHPFGLQAVTPIRLVCHAPGAPGLRWLGLG
PDLRPSRALLKLQRLFDRHATWARGRSFDQLRRLLAGSTAVVSLWRGKRL
VAFGRATSDGFSRAVLWDIVVAGDLQGRGFGRRIVEELLHTPSVAGVERI
YLMTTNSAGFYRQLGFRDADPQQLLVLKR
>SYNW2279 hrcA, putative heat-inducible transcriptional repressor HrcA
MKPLSARQQQVLQATVHHYVDTMEPVGSRTLVQRFGIPASSATVRSAMGA
LEKRGLLTQPHTSAGRIPSALGYRCYVDDLLPEPGVAVQHLERELTGLSL
RWAALDDLLQQLARRLTDFTGLMSLITRPQQPRAQLEAIRLVQSGDRLLV
MLVEDSGRASHLNLRLPPGASDELTAIERWTDQQLEDGSINWRSLPPQLQ
RSGDVLRSALDHPSMSPETPLVVHGLSRLVAEPEFHSTAELRPLLELIDD
QPCAVVSATDQPGVWIGEEHPQKALQACSVVQAPYRCGQEGVGQVALVGP
MRMAYATAHAAVQRVARHLDLLLN
>SYNW1414 hypB, hydrogenase expression/formation protein HypB
MHMPLEDTLGLNLLAANQHQAEHNHEHFQAWNLLCLNLMSSPGAGKTALL
ERSLPALAAKHKMAVLEGDMTTQLDAERLEAVGIPVVPITTGRACHLDAA
MVSGGLTLLKQRLDPTQLDLLLVENVGNLVCPAEFDVGEHHKVALLSVTE
GDDKPLKYPLMFRQADVVLITKVDLLPHLPVELAAIRRNILSINPNATVI
EVSALSGEGLDVWHQWVRQALADRTAVSSAAARAADQSPALATA
>SYNW0600 nusA, N utilization substance protein A
MALVLLPGLSNLIDDISEEKKLPPQVVEAALREALLKGYERYRRTMYLGI
SEDPFDEEYFSNFDVGLDLEEEGYRVLASKIIVEEVESEDHQIALQEVMQ
VADDAQEGDTVVLDVTPEKEDFGRMAAATTKQVLAQKLRDQQRRMIQEEF
ADLEDPVLTARVIRFERQSVIMAVSSGLGRPEVEAELPRRDQLPNDNYRA
NATFKVFLKEVSEVPRRGPQLFVSRSNAGLVVYLFENEVPEIQEGSVRIV
AVAREANPPSRSVGPRTKVAVDSIEREVDPVGACIGARGSRIQQVVNELR
GEKIDVIRWSQDPGQYIANSLSPARVEMVRLVDPVGQHAHVLVPPDQLSL
AIGREGQNVRLAARLTGWKLDIKNSTEYDQSAEDAVVAELISQREQEEAL
QMEAEERLAAEQAARAEEDARLRELYPLPEDDEDYVEGDQLGESEQTEAT
ASEEMPGEEPTSEEPAPEDDGEVAR
>SYNW2344 nusG, transcription antitermination protein, NusG
MPDDLTTTDPAEVLDLPAPNEGEEGTLSDVPAANTAIARWYAVQVASSCE
KKVKATLEQRAITLGVSKRILEIEIPQTPAVKVKKDGSRQSTEEKVFPGY
VLVRMVLDEDTMMAVRSTPNVINFVGAEDRRAAGKARGHIKPRPLSRAEV
DRIFKRAAEKKTVVKVDLTEGDQILVTAGPFKDFQGEVIEVSGERNKLKA
LLSIFGRETPVELEFSQISKQN
>SYNW0947 phoB, two-component response regulator, phosphate
MPAAVATSRLLVVEDDDSIRETVGEVLRAEGYDVLTCGDGAEALNLFTSE
PAQQVDLLVLDLMLPGLGGLDLCRELRRINNNTPILVISARDSETDRVLG
LEVGADDYLVKPFGLRELVARCRALLRRAQQDPSVLPEIYSHANLCLYVN
ECRVTRDGNDLNLSPKEYKILELFLQHPKRVWSRDQLLEKIWGIDFVGDT
KTVDVHIRWLREKIEEQPSSPELIRTVRGFGYRFG
>SYNW2260 rbcR, putative Rubisco transcriptional regulator
MADLPFTLDQLRILRAIVSEGSFKKAADSLYVTQPAVSLQIQNLEKQLEV
SLFDRGGRKAQLTEAGHLLLSYCDRILSQCHEACRALDDLHNLKGGSLIV
GASQTTGTYLMPRMIGLFRQKYPEVAVQLQVHSTRRTGWSVANGQIDLAI
IGGELPPELNDLLQVVPYASDELALVLPVKHPLARLAELTKEDLYRLGFV
CLDAQSTTRKMVDQLLARSGLDVQRLRIEMELNSLEAIKNAVQAGLGAAF
VPVVSIERELAAGTIHRPVVADLQVRRQLKLITHPARYSSRASAAFRQDV
LPVFASADSPLRQAKPSQPQPLQA
>SYNW1093 recG, ATP-dependent DNA helicase
MADSSRSQESRGLNREQLTELLGWLKPLQQALSLEVETGFNNLQGRQQRF
DGFLVHQLAAPPPLPYPPGVEARLQRLHQGFVGYEELPESGRRRLVTDTR
QWLHELRLRLEPSAPMAPPRLRLATATASAPRRELGLDSPLTQLQGVGPK
LAGRLAAIGLLLVRDLLKHYPRDHVDYATRRRIEALVVGETATIVATIRR
CNGFVSPRNPNLSILELQLQDPTGRIKVTRFLAGKRFSSPAYLKGQQRLY
PQGATVAVSGLIKEGPYGATFQDPLIEVLESSNAEVRSRNIGRLMPVYGL
TEGVAADRFRQLIDQVLPLARAWPDPLNQTERRDWSLVSLPEAFQGLHAP
DDPSQLDQARRRLVFDEFLLLQLGLLRRRRTLSQRPCPQLELIRRGDGLV
GKFLASLPFAFTAAQERVFGEIEADLQRSQPMARLVQGDVGSGKTVVAIA
ALLSTISSGWQGALMAPTEVLAEQHHRNLCRWLPPLHVTVELLTGATPKT
KRRQLLDDLANGSLKVLVGTHALLEDPVVFSRLGLVVVDEQHRFGVHQRD
RLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIRTAM
LTAAQRSQAYELIREEVARGQRAYVVLPLVEESEKLELRSAVEVHAELAS
EVFPELTLGLLHGRLNSADKQSVLRDFADGRSQVLVSTTVVEVGVDVPEA
SVMVIDHAERFGLAQLHQLRGRVGRGAAASHCLLINGSSNPLARQRLDVL
VCSNDGFEIAEMDLRLRGPGQVLGTRQSGLPDLALASLADDGAVLEDARA
AAQQLMEQDPDLSAHQVLLALLEEQQRRLSGAAPLN
>SYNW1379 rimI, putative ribosomal-protein-alanine acetyltransferase
MTASLEIRPFQETDLDFVRQLARQEDFAPGIGDIAIYANTANQGVWLAWQ
GDMPVGCIAAVKYNLDYGFMGLFVVHPDHRGGGVGRQLWDHALALLADVT
CIGLEAAPSMVEFYQRQGFRKDSITTRRQHLRLEESSQHPTRRLLHRNDI
TIVPLKAISLDAVQAYDERHEISPRPHFLQQWLNHQAGDVFVAMDGSHQC
HGYVRIRPCLLPIGQGWRIGPLLAEEPGIASLLLSNAMDRHKGIILIDTP
GHNRSARTVAGAKGFRRMGATHRMYKGDLDNGHDQNIYGLACLELG
>SYNW0152 rnc, putative ribonuclease III
MDQARRDSLKSLIKRLGLEDMDSPSLLLEVERAMTHTSSGRTDHNERLEF
LGDAVLRLAATLYLDRHHPGLTVGDSSSLRAQLVSDRWLAELGEAIDIES
CLILGVKALGDAAARTTIRADATEALIGALYKVSGSLEPILGWLTPHWQR
TSADVLAAPHRFNGKTTLQEWSQGQGLGLPEYSTEERSQVHGDPQRFRST
VRVASKVLAEGHGRSRKEAEQNAAIAAAQTFAGNAAPH
>SYNW2236 rpaA, two-component response regulator
MKPCILLIEDDQDMRDLVSGHLEHSGFDVQRADDGIKGQALALQYTPDLI
LLDLMLPKVDGLTLCQRLRRDDRTSGIPILMLTALGGTKDKVSGFNSGAD
DYLTKPFDLEELQARVKALLRRSDRAPVGSSNHNEILSYGPLTLVPERFE
AIWFDTPVRLTHLEFELLHCLLQRHGQTVAPSLILKEVWGYEPDDDIETI
RVHVRHLRTKLEPDPRKPRFIKTVYGAGYCLELPIGGELDDLQDVVAIAR
NERNQDSERASA
>SYNW2246 rpaB, two-component response regulator
MTATTPSKETILVVDDEASIRRILETRLSMIGYNVVTACDGTEALELFEN
TAPDLVVLDVMMPKLDGYGVCQELRKESDVPIVMLTALGDVADRITGLEL
GADDYVVKPFSPKELEARIRCVLRRVEKESVAGIPNSGVIQVSDLRIDTN
KRQVFRADERIRLTGMEFSLLELLVSRSGEPFNRGEILKEVWGYTPERHV
DTRVVDVHISRLRSKLEDDPANPELILTARGTGYLFQRIIDSVASEGP
>SYNW2090 rpoA, RNA polymerase alpha subunit
MLQYQIDRIEHQVEEDRSQSGVFLIGPLERGQATTLGNALRRVLMGGLEG
SAVTAIRIAGVNHEYATVPGVREDVLDILLNCKELSVNSRSPELEIGRLV
VAGPAEVTAKDLQFSSQVEVVDGNRSIATVADGYSLELEVHVERGVGYRP
VDRHSEDTSAIDLLQIDAVFMPVIRVNFTIDETAVAEGGSARERLRMEIV
TDGSITPDDALAQSANYLIELFQPLATVTLVEEPGIEPEPSAEAQIPLEE
LNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALER
IGISIPQSRTSA
>SYNW0613 rpoB, DNA-directed RNA polymerase beta chain
MSSSAIQVAKTATYLPDLVEVQRASFKWFLDLGLIEELESFSPITDYTGK
LELHFIGSEYRLKRPRHDVEEAKRRDATFASQMYVTCRLVNKETGEIKEQ
EVFIGELPLMTERGTFIINGAERVIVNQIVRSPGVYFKDEMDKNGRRTYN
ASVIPNRGAWLKFETDKNSLLHVRVDKTRKINAHVLMRAMGLSDNDVLDK
LRHPEFYKKSIDAANDEGISSEDQALLELYKKLRPGEPPSVSGGQQLLQT
RFFDPKRYDLGRVGRYKINKKLRLTIPDTVRTLTHEDVLSTLDYLINLEL
DVGGASLDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIKERMTVGETD
SLTPAQLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRISALGP
GGLTRERAGFAVRDIHPSHYGRLCPIETPEGPNAGLINSLATHARVNEYG
FIETPFWKVENGVVIKDGDPIYLSADREDEVRVAPGDVATESDGRIKADL
IPVRYRQDFEKVPPEQVDYVALSPVQVISVAASLIPFLEHDDANRALMGS
NMQRQAVPLLRPERALVGTGLETQVARDSGMVPISRVNGTVIFVDATAIV
VQDEDGQEHTHYLQKYQRSNQDTCLNHRPIVRCGDQVIVGQVMADGSACE
GGEIALGQNVLIAYMPWEGYNFEDALLVSERLVTDDLYTSVHIEKYEIEA
RQTKLGPEEITREIPNVAEESLGNLDEMGIIRVGAFVESGDILVGKVTPK
GESDQPPEEKLLRAIFGEKARDVRDNSLRVPGTERGRVVDVRIYTREQGD
ELPPGANMVVRVYVAQRRKIQVGDKMAGRHGNKGIISRILPREDMPYLPD
GTPVDICLNPLGVPSRMNVGQVFELLMGWAASNLDSRVRIVPFDEMHGAE
MSQETCEAFLKEAAKQPGKAWVYNPDDPGKLVLRDGRTGQPFDQPVAVGY
SHFLKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWALE
AYGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPRPGTPESFKVLMRE
LQSLGLDIAVYTDEGKEVDLMQDVNPRRSTPSRPTYESLGVADYDED
>SYNW0614 rpoC1, RNA polymerase gamma subunit
MTNSNLRTENHFDYVKITLASPERVMEWGQRTLPNGQVVGEVTKPETINY
RTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESR
VRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVV
LDPGDHKELKYKQLLTEDEWLEIEDEIYAEESEIENEPVVGIGAEALKQL
LEDLNLEEVAEQLREEINGSKGQKRAKLIKRLRVIDNFVATSARPEWMVL
DVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPE
IIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFR
QNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQN
IVNNIKAAKKLIQRADDEVMQVLQEVIDGHPIMLNRAPTLHRLGIQAFEP
KLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLAIEAQTEARMLMLASNN
ILSPATGEPIVTPSQDMVLGSYYLTALQPGAEQPEFGDRSRTYSSLEDVI
HAFEDTRIGLHDWVWVRFNGEVEDNDELDEPIKSETLSDGTRIEQWTYRR
DRFDEDGALISRYILTTTGRVVMNHTIIGAVAAA
>SYNW0615 rpoC2, RNA polymerase beta prime subunit
MTSSSSKSNKSRKSSKAAKDTTPVHESASRPLSKTPPPFRNHIVDKRGLK
QLVAWAYKNHGTAVTSSMADKLKDLGFRYATQAAVSISVNDLQVPEAKKA
LLGEAEEQITATEERYRLGEITEVERHTKVIDTWTETNERLVDAVKKNFN
QNAPLNSVWMMANSGARGNMSQVRQLVGMRGLMANPQGEIIDLPIRTNFR
EGLTVTEYVISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREDDC
GTTRHIVVEAEDGRFGNRLVGRLTASQVVSAVGEVLAERDTEIDPPLSKR
IEKAGVTAVSVRSPLTCEANRSVCRKCYGWALAHNELVDLGEAVGIIAAQ
SIGEPGTQLTMRTFHTGGVSTAETGVVRSVVAGTIEFSAKARVRPYRTPH
GVNAQQAEVDFNLSIKPVGKGKTQKIEITNGSLLFVENGQTIDADVTVAQ
IAAGAVKKSVEKATKDVICDLAGQVRYEEAIQPREVTDRQGNITLKAQRL
GRMWVLAGDVYNLPPNAQPVVQGDTEVTEGQVLAEASQRSEYGGDVRLRD
SIGDSREVQIVTTAMTLKDFKLLEESTHSGEIWNLEAKDGTRYRLNTIPG
SKIGSGEVVAELADDRFRTGTGGLVKFAPGLAIKKARSAKNGYEVNKGGT
LLWIPQETHEINKDISLLMITDGQWIEAGTEVVKDIFSQTAGVVTVTQKN
DILREIIVRSGDFHLSSDSKALERFEGDGHMVNPGEEIAKGLSIQDMKYV
QTVETPEGKGLLLRPVEEYTIPNEAQLPELSHVKQANGPHLGIKATQRLA
FKDNELIKSVEGVELLKTQLILETFDTTPQMTVDVEKAPDKRAKTISRLR
LVILESILVRRDTMSDSSHGSTHTELQVEDGISVKAGDVIATTQILCKQA
GVAQLPEATEADPVRRLLVERPEDTTTLSTSGKPVVAVGQRIVDGELLAE
GDPSSCCGEVEAVDSNSVTLRLGRPYMVSPDSVLHVRDGDLVQRGDGLAL
LVFERQKTGDIVQGLPRIEELLEARRPRESAVLCKKPGTVEIKQGDDDES
LTVTVIEADDAIGEYPILLGRNVMVSDGQQVTAGELLTDGPINPHELLEC
FFEDLRSRKPLMDAAQEAIANLQHRLVTEVQNVYKSQGVSIDDKHIEVIV
RQMTSKVRVEDAGDTTLLPGELIELRQVEDTNQAMAITGGAPAEFTPVLL
GITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLI
PAGTGFSGFEEELQKEAGPHPDILSEDPAGYRRMQNLRPDYTVEMPPAAS
STAVLDDPSDADLEATRTRHNIDPSASNFAAFARPDADNELKEEQVVDAE
AVEGLQEEGLLSDD
>SYNW0525 rpoZ, putative DNA-directed RNA polymerase (omega chain)
MISAGVDSSDLAKRGESLIRQSSNRYLTTVRIAFRAKQRRFDDFDGLLEE
SSVKPVQRAIVELSDEQDQPDLLPG
>SYNW1783 sigA, rpoD, Putative principal RNA polymerase sigma factor
MSPAATKTAQPDIVLLANSEGEVREVKSNAETKKAPARRRSSKASAKDLT
AAADELLSAADPKKAEAGKTKAKAAPKASTKKTTAKAATAKKPAAKKASA
KKASSKTSAETDAAPAKAVVAKPEIVLSPEEKAKAIAAEKAAKAKALASI
KIGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAAQ
FESDNGREPDKKEWAALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSI
AKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAIT
RAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMT
IEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADIENPEQDVAKNLLR
EDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIE
AKALRKLRHPNRNGVLKEYIK
>SYNW2324 spoT, guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
MLDASSPQDSSRTDSAPAPVVCGRPELRRHPVRHPDEYNILLPEWLRQCI
LNVPPGLGQSCPTDPEALLVAAFDFGFQLHEGQFRASGDPCIVHPVAVAD
LLRDIGASASVIAAGFLHDVVEDTDVTPDQIELHFGSEVRELVEGVTKLG
GIHFNNRTEAQAENLRRMFLAMASDIRVVLVKLADRLHNMRTLGALKEEK
RQRIARETKEIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVAS
KRSEREERLGVTVALLNDRLAQAGLEGCEVSGRPKHLFGIWSKMQRQQKA
FHEIYDVAALRIITPSVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGY
QSLHTAVIGRHRPIEVQIRTIEMHRVAEFGIAAHWKYKEGGSPASSSSEA
ERFNWLRQLVDWQQEGGNDDHNDYLSSIKEDLFDEEVFVFTPKGDVVGLR
KGATPVDFAYRIHSEVGNHCHGARINDRLCPLTTALHNGDFVQILTSNTA
HPSLDWLNFVATPTARNRIRQWYKRSHRDETIERGKDLLERELGRDGFEA
LLKGEAMTRVAQRCNVGSTDDLLASLGFGAVTLQQVLNRFREEIRLIAEQ
DSAPPSNEEVARALVPSKEPGSDQRHSEDAILGLEGLDYRLGGCCSPLPG
EAIVGTVALGNHGITIHRQECANVESIPKDRRLPVRWNVHGAQPLQRFPV
QLRIEVIDRVGILKDILMRLSDGAINVSDAQVKTAVGRPARIDLRVELRG
SDQLNRTMDQIRSMADVIGIARTGVS
>SYNW2443 ureG, urease accessory protein G
MSSKLRLGVAGPVGSGKTALVEALCLRLRDQLQLAVVTNDIYTQEDAQFL
TRAGALEPERIRGVETGGCPHTAIREDCSINRAAVADLEGQFPDLDLVMV
ESGGDNLAASFSPELVDLCIYVIDVAAGDKIPRKGGPGITRSDLLVINKI
DLAPLVGADLSVMEADTRRMRGERPWCFTNLQNGDGLVQVVEFVLQQLPN
A
>SYNW1202 zam, putative acetazolamide conferring resistance protein Zam
MKAGFDPHTMKFSVADLLDQLSYDQPVLQTTLAKILKLSNKADKERLDLA
IDGLSKLGVLSRQGDEGLVRYQAEDLIDARLRCSSKGFCFAIRDDGGDDV
YIRDHQLNHAWNGDRVLVRVTREGGRRRSPEGGVQCILERSTQSLLAQVE
RQQERLVAAPLDDRMLTSIELPADAEVHVSEESATTVVEVKIDRYPIAQH
PAQGHVARPLPLNAGPAADRDLLLTKAGLHERPAAPRASVKSPPSKGRTD
LTDQPSLLLCSWQHRDAPPLPAVYVEARDGGCRLWLHAPSVAERFGQGNS
LDLWIRDRADAICLGEDWQPLLTPALTKACRLKAGESSDALTVRLDIDAN
GHLTDWEFMLSTIRPVADISTAQLRALAERKPKSRSIPAALKPIKDQLGQ
LETLMFCADCLMGHEQSAGAVALDLRPPQIDALGDLRWADPSGQAHRWTD
VIDRTDPNSILQPLLRAADRAWGQHRAALQLPGIAWISSEPDATVLTDVA
KTAVALDLPLELDDDGSPTAQELITVFAESDQRRVLEQQLSHALAQPQFQ
AELKTPETSDDDTTDMSAALTPWCCGSLSYAQLANQQVIQMLLNDGKDRP
NVRQKERLNLGRRGCADDLQWSLFTGAQEEKLTNIVSQRLVQRLNSRRRQ
VLELQRDLLAMVQARSAEPLVGQEAAGHVSGVQSYGFFVEVGETRVEGLV
HVSSLNDDWYEYRSRQNRLVGRKNRRAYQLGDQVRVRVIKVDVLRNQIDL
EVIPEPTADEGDNNADSSTVESPEQPMAVTLSGI