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2024-05-07 13:54:10

Gene list

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COG category: Transcription
Organism: Synechococcus sp. WH 8102, WH8102

Number of genes found: 81

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. WH 8102, WH8102
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SYNW1487 ROK family sugar kinasechromosome CDS1437863 909 - 0.684268
NA SYNW0689 conserved hypothetical proteinchromosome CDS672895 1455 - 0.64055
NA SYNW1314 conserved hypothetical proteinchromosome CDS1309296 1089 - 0.641873
NA SYNW0091 conserved hypothetical proteinchromosome CDS92554 1002 - 0.642715
NA SYNW1540 possible acetyltransferasechromosome CDS1483524 504 - 0.654762
NA SYNW2173 conserved hypothetical proteinchromosome CDS2066779 237 + 0.64557
NA SYNW0808 two-component response regulatorchromosome CDS781965 726 - 0.625344
NA SYNW1660 possible transcription regulatorchromosome CDS1597273 144 - 0.5
NA SYNW1838 similar to secreted protein MPB70 precursorchromosome CDS1754876 1758 + 0.65529
NA SYNW1879 similar to chloroplast membrane-associated 30 kD proteinchromosome CDS1794045 792 - 0.623737
NA SYNW1224 probable ribonuclease IIchromosome CDS1214922 2049 - 0.629575
NA SYNW0798 Putative transcriptional regulator, ArsR familychromosome CDS774974 315 - 0.615873
NA SYNW1164 conserved hypothetical proteinchromosome CDS1157952 717 - 0.576011
NA SYNW0039 possible helicasechromosome CDS37349 1620 + 0.642593
NA SYNW0964 possible LytR-membrane bound transcriptional regulatorchromosome CDS957986 960 + 0.645833
NA SYNW1621 Type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS1560024 942 - 0.579618
NA SYNW1509 Possible type II alternative RNA polymerase sigma factorchromosome CDS1459208 927 + 0.582524
NA SYNW1177 Transcriptional-repair coupling factorchromosome CDS1167825 3579 - 0.621961
NA SYNW1973 possible transcriptional regulator, luxR familychromosome CDS1883957 210 + 0.628571
NA SYNW0012 conserved hypothetical proteinchromosome CDS13895 1422 + 0.604079
NA SYNW1186 hypotheticalchromosome CDS1177744 1317 - 0.582384
NA SYNW1385 possible DNA-binding response regulatorchromosome CDS1365205 708 - 0.644068
NA SYNW2362 SNF2 helicase homologchromosome CDS2267944 3192 + 0.649436
NA SYNW0126 two-component response regulatorchromosome CDS123900 762 + 0.594488
NA SYNW0732 conserved hypotheticalchromosome CDS716706 246 + 0.585366
NA SYNW2105 putative transcriptional regulatorchromosome CDS1988419 144 + 0.527778
NA SYNW0920 probable ATP-dependent RNA helicase DeaDchromosome CDS880771 1797 + 0.629939
NA SYNW1592 Possible AraC-type regulatory proteinchromosome CDS1534773 645 + 0.617054
NA SYNW0566 possible two-component response regulatorchromosome CDS555356 705 - 0.673759
NA SYNW0273 conserved hypothetical proteinchromosome CDS272679 441 - 0.632653
NA SYNW0317 conserved hypothetical proteinchromosome CDS314117 696 - 0.668103
NA SYNW2163 conserved hypothetical proteinchromosome CDS2056539 762 - 0.645669
NA SYNW1380 possible DNA-binding response regulatorchromosome CDS1361949 687 - 0.558952
NA SYNW1069 conserved hypothetical proteinchromosome CDS1058476 297 - 0.602694
NA SYNW0599 conserved hypothetical proteinchromosome CDS582006 279 - 0.62724
NA SYNW0623 conserved hypothetical proteinchromosome CDS607974 393 + 0.559796
NA SYNW0102 Type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS102314 999 + 0.588589
NA SYNW1598 possible two-component response regulator or pseudogenechromosome CDS1540086 678 - 0.657817
NA SYNW2059 conserved hypothetical proteinchromosome CDS1955929 1446 + 0.663209
NA SYNW1294 conserved hypothetical proteinchromosome CDS1292882 498 + 0.588353
NA SYNW1665 conserved hypothetical proteinchromosome CDS1605378 141 + 0.439716
NA SYNW0080 conserved hypothetical proteinchromosome CDS79065 540 - 0.651852
NA SYNW2493 conserved hypothetical proteinchromosome CDS2395276 468 - 0.643162
NA SYNW0977 conserved hypothetical proteinchromosome CDS968928 306 + 0.598039
NA SYNW2268 possible transcriptional regulatorchromosome CDS2166669 276 + 0.550725
NA SYNW1232 Possible type 3 alternative RNA polymerase sigma factorchromosome CDS1225446 678 - 0.551622
NA SYNW1875 two-component response regulatorchromosome CDS1790965 627 + 0.547049
NA SYNW1044 putative SOS mutagenesis protein UmuDchromosome CDS1039831 432 - 0.671296
NA SYNW2427 Possible type II alternative RNA polymerase sigma factorchromosome CDS2331535 1404 + 0.626068
NA SYNW2370 conserved hypothetical proteinchromosome CDS2278819 354 - 0.59322
NA SYNW0904 two-component response regulatorchromosome CDS866065 768 - 0.653646
NA SYNW0643 hypotheticalchromosome CDS628255 1161 + 0.416021
NA SYNW0987 conserved hypothetical proteinchromosome CDS983554 2019 - 0.657256
NA SYNW1582 SOS function regulatory protein, LexA repressorchromosome CDS1524986 705 - 0.628369
NA SYNW0926 similar to membrane bound transcriptional regulatorchromosome CDS887658 807 + 0.612144
NA SYNW1423 conserved hypothetical proteinchromosome CDS1392604 672 - 0.627976
NA SYNW1984 conserved hypothetical proteinchromosome CDS1891003 483 + 0.573499
NA SYNW0464 hypotheticalchromosome CDS468796 225 + 0.568889
NA SYNW2496 Type II alternative RNA polymerase sigma factor, sigma-70 familychromosome CDS2399426 987 + 0.598784
NA SYNW0010 NusB family proteinchromosome CDS11766 636 + 0.597484
NA SYNW2289 two-component response regulatorchromosome CDS2183797 738 - 0.638211
hrcA SYNW2279 putative heat-inducible transcriptional repressor HrcAchromosome CDS2175109 975 + 0.671795
hypB SYNW1414 hydrogenase expression/formation protein HypBchromosome CDS1385592 735 + 0.651701
nusA SYNW0600 N utilization substance protein Achromosome CDS582281 1428 - 0.621148
nusG SYNW2344 transcription antitermination protein, NusGchromosome CDS2245424 669 - 0.620329
phoB SYNW0947 two-component response regulator, phosphatechromosome CDS908407 708 + 0.600282
rbcR SYNW2260 putative Rubisco transcriptional regulatorchromosome CDS2157511 975 - 0.620513
recG SYNW1093 ATP-dependent DNA helicasechromosome CDS1079115 2511 + 0.635205
rimI SYNW1379 putative ribosomal-protein-alanine acetyltransferasechromosome CDS1361047 891 + 0.579125
rnc SYNW0152 putative ribonuclease IIIchromosome CDS146671 717 - 0.62622
rpaA SYNW2236 two-component response regulatorchromosome CDS2133642 789 + 0.604563
rpaB SYNW2246 two-component response regulatorchromosome CDS2146350 747 + 0.610442
rpoA SYNW2090 RNA polymerase alpha subunitchromosome CDS1975627 939 + 0.608094
rpoB SYNW0613 DNA-directed RNA polymerase beta chainchromosome CDS592422 3294 + 0.61354
rpoC1 SYNW0614 RNA polymerase gamma subunitchromosome CDS595766 1905 + 0.59685
rpoC2 SYNW0615 RNA polymerase beta prime subunitchromosome CDS597718 4095 + 0.605617
rpoZ SYNW0525 putative DNA-directed RNA polymerase (omega chain)chromosome CDS521047 228 + 0.600877
sigA, rpoD SYNW1783 Putative principal RNA polymerase sigma factorchromosome CDS1712270 1416 + 0.592514
spoT SYNW2324 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)asechromosome CDS2225569 2331 - 0.621622
ureG SYNW2443 urease accessory protein Gchromosome CDS2348961 606 - 0.617162
zam SYNW1202 putative acetazolamide conferring resistance protein Zamchromosome CDS1191642 2355 - 0.607643