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# Mycoplasma mycoides subsp. mycoides SC str. PG1, PG1

>MSC_0022 hypothetical protein
MSVHENSNSVEIKTEDIVENMNLSSLEEDILNYCDKNQKISSLTELADEF
DMSWITMQRTVKKLVKKNILKRIGSNKTGYWIRIDK
>MSC_0780 Putative C5 methylase (MAV1virus-like)
MEVFAMHNKIDNSKNSLSNEKPIFKYVVWALYDDAESSYQKAIKKYFDNE
FIVYSIGINDPSKIKFKESENYKYKQIDLSLLNFNLINQLKQLEKPDIIL
ASPPCESWSGADCGGKMFSKITTSSEKVEDDTSIWKVRNKKYYDEYNKTA
HPVKRRLFLQKEVGRILGISTIGATIHIIQTFKPKIWIIENTATSKTWDF
QKHHWNFYENFYENKTYYSSYDIDFSLKPTIFKSNIKLDLLTNRDKGNND
HMARGNYSKRSSIPSELIKDIINQIKLKLNKKSK
>MSC_0528 Conserved hypothetical protein
MNANLNIDQLDNLINQNDSLIIAIGSEIYQTDNQIEFENNFSDFIKEFNF
IDFKQASVYPFLDIKNYWAFFSRYIKLNYFDQKLDNSFIDLKNYLENKNY
FIITTNRDNSLELAGFDLNKIFYLDSKLNLLECSKKCSEELYINDDAILN
MANNQKNLKVELEQIPVCKKCNSYLKVHQRFWCQVFIKDDEFLQTQNNYQ
KFINQNKDKKMLFWEIGINFNNQLTVKKPFWQMIEKFDKATYLTMNKKIY
RIPLEIRSKTITYTNDLNLVIKNLEEVKNGTNRTN
>MSC_0932 HYPOTHETICAL PROTEIN
MCDYILTNISDYHNFSVKSICKKLNVQPSVITKTLVKLEIGGLKQLISYL
ENNSNFFKDETKPSFDNIIDEFENRLEDSLKQLKITLDINYLKEVVCKLL
SSKKIILFCTGKTKILANFLFFQLLELNLSVELFSNLFDSKAYNVDQACI
IVISTSGNNSKINRYLNFIHKRNANVIIAITSSPLLKTDIKVDYHIYGSE
NNFFINDNRSNPMIEKYKIQYILDLIFLLIINQIDLNNLKFQEKVKTTNL
V
>MSC_0154 Conserved hypothetical protein
MNVKELKHMNSHSLVFNYRDNKHFLQEMYTIIKKRGPKTFEEWMVNNNFD
SAYIPVTIVNERNGVLAVSGFIKSKAIINKTFLNTILLTNTFTKAKESNP
LIVNELIQGVVKKYENISDFIYTFSNVENDEVLIRNGFKKIKEYTYFMRW
DPNKEAKLSVLKRLDLDTNQADFEFVKDELFHSSKNNSLFYIREDGALSI
YSLLKYYRNNVFYIFNLDAIVIFSINNKTFQLIGLYSKNEIDVLELLDAI
VPKGISLIEFYFVPNIKSKFVVKELRKVRAADCQHRSFLYVRQSTTNLEA
SKFVVPLLNRLK
>MSC_0378 conserved hypothetical protein
MRYDDQTHIASRDEIFSLGLSGKNLSYDALQTDISWNSATFNLLNSYFKE
LGIRIIEDYNDLVSLELAKNNVLTNAGALLADQKFIKHSLVFATYWNDFE
KSNNKTGKSMDNFDGNLLEILKNSQQFIENKSNVDFKKTDTKRIEYPDYP
KLAIREALVNALVHRDYNKFYDQININIYTDRLEIISPGGMVDKSKIQEL
DPYRIESKRRNPILANIFSMLKLMERRGSGIKRNFKYLCNTRKLQFKTYP
RIYIWW
>MSC_0133 Hypothetical protein
MSKVRNLDLVYSYLQSTKTPSSLNEIWKSISKDIISQKKDEISVIAGLYG
DMVLDNRFALTTDNLWALSSNSSVENIKKQYDDFIITDHKHRYSDLDEEL
TIDDEMLLDEDYDSDFTQELDDFDEDFDDTDQTYIDDDEYNR
>MSC_0645 Sucrose PTS repressor, DeoR family
MLKDQRRQKILEIVNEKDFVTNRQLAKLLSSTIQTIISDISELDKGKKLY
KVYGGAKSANSLAKRYELFDEEKQHINIDIKDLIAQKASEYVSNGDLIFL
DTGTTTKQMIKYLINKKIIVVTNGYSIALKLVEQDIEVILLGGSINPSTH
ATIGELALKNLDNFYFDKVFIGMNNLSSQHFYTTNIKEALIKEKAIKNSD
KSFILMDSSKFGSKNVIKVDVLKETILISDKDTDEYKGLIINLE
>MSC_0018 Transcriptional regulator, RpiR family
MAIDLLTKIKDFIKTDCSQDYKNIGTYLLKNYTNIKNLTITAISKECNTS
PNKITRFAEKLNLKGFNELKFRLNDISNSIIIDNELIPISSRIDDKAKFY
NDYFEILLNSIKQQQINLKTQPINEVVNLINKANKIYLFAFNLSYNVSKN
FIQRLRWYQKDAISESDYISIKTYLNIIKPDDLVILITISGENEYIKKIA
ESLNKKVKIIGIGPKQSSMISLFDKYLYFETDESELWSINSIKAQLVIQL
LDFVYVKWLKSNKRK
>MSC_0755 Conserved hypothetical protein
MFYSAKSFNQNISSWNISNVVNMSAMFFEAEKFNQPIGNWNVSKVTDMDF
LFDGAITFNQNINDWKTDSLTDLTYTFRSAISFNQPLNNWNVSKVKSMDG
MFTEATSFNQDINLWNTNNVESMNGMFSSPDKFNQNLSSWDVKKVGNAQN
FTNALKSVMTKDKLPKFNQKYSDDKYFMVVKK
>MSC_0379 conserved hypothetical protein
MELKEILNIYAIQENYSLKHTPEFISDDKSFIVILKNLNYEQDQSSNISV
SEYLNKIDTKIHSNIKQDIDTDENKSRSTTTEQIEIVLEFAKKHSKFKRI
DIDKLLNVSPTRSREILNQLVKKNKLITIGSFKDKEYLLA
>MSC_0024 Conserved hypothetical protein
MFNRESEQVEFKKSAAELKEAVISLCAMLNKNGHGILYFGIKNDGTIVGQ
QIGKTTTTDIANEIKNHIKPNIHPNVVVLKQDDLNYISIEVNGAERPYSA
YGKYYTRVDDQDQIIYNNELRKLFQTNEFTNLTWEKNNKVWRRWSWWKSF
NKLCKKGIWSRKV
>MSC_0386 Conserved hypothetical protein
MNQQYSAIIEGLLFIYGDDGISLLDIQTVLDNLKPTEIKEIIIQLNKKYL
SDPSTAFCIQTYKKNNYRLQTKPELHEYFAKLEQYNENKKLSHSTIEVLS
IIAYKQPITKQQIDEIRNVDSTYQLYKLREKKLIKVVGKDLENNRSNLYG
ITDNFFKVFNIKGGIEELPTISDDDIKQAIENNNEIKQEQQNLDLYGNID
DFNLDSQNE
>MSC_0556 ROK family protein
MTNIKKYLSIDIGGTSIKYGIFNENLNPLFINSITTIPIKDELLKQIIDI
IISSLPLDGISIATAGVVDKNGVIKFANQNIKDYFNFDLKTYIKDFLITY
KNLVPIEIINDANSASYIEYVNNKTIKNSVTLTLGTGVGMGIILNGELFL
ANNGIAGEIGAIKNFNQYIDTDLSWTKFIKKLNQNKYHYNSNDIWTLYNK
NDFYKTEIENYLDKLVNLLCTISYILSPQVIYLGGGFSYCSEQILGLINN
KFKKEFVFYDINPINIKYTSNKNDSGLLGVLHLLVDKHFKN
>MSC_0037 Conserved hypothetical protein
MSDLNLYGLLFEGLVIRDLKVYAQANEAKVYHYQDYLDNELDAVIEFKNG
EWCAIEIKLGLNQVEQAAKQLNKAIDAITRSKNKPPINKCIIVGFGNLVY
KRKEDGIIVIPINALKD
>MSC_0351 conserved hypothetical protein
MIMTNIMINKNKNLRKDIASNQMLEKHQLIRIVKNKNNEIFIDTTYKANG
RGVYLKPDLNSLNIARHKNLIAKSLKSKIDVSIYDQIEEFINAKR
>MSC_0043 Conserved hypothetical protein
MDVTKLILRLDQLSKEHSSTTGVTSRIILDNIELITNSTISKVAQITYTS
PATITRFCQRHLDISGFSELQTLLRVYLNQQEEQNRLLLQNKDKKISKFE
EISKAINATDALIETNQVDKLVKAIYNTKTVALISYDNSVNHAVTELAEK
MNLIGISPVIINQQDLLDYYTKISDLSWVFIVISHFAENITTYQSIVQLK
KNGSRIGLISMNKPSKYSSICDYWIKYAVTDADPLQKIKHSANFSLLYVV
QVLFNRILTNDHNRFEKIIKTLKIE
>MSC_0370 conserved hypothetical protein
MAIIDQLFDWQKELIIKNKHKNQLGLFLDMGSGKTILSLGFCEINQVDAI
IVIASRSKTLETIEQNASFTNYLQNDLNFKVYLKTDLKNADFKNNQKEAI
IINYHSFLLNINKENFFNYLAKFISVHKNQKIAIIIDESQNIKNSRALIS
ISIKNFVDLVKKLAFKTYLYLLSGTPQTTGAIDMFNQLRFLGLKMTRYQF
EDQFCIKTKFNNAYRRVYKINGYKNIKQLEQLINQFALTSKNIPPIYLPK
QQFIGIKLPISSEFELFTNKKITEYDLLTFCNKNNIKSNYKPNELNLIKN
PYYKNLSYPDDKWIAGDDATFWLRTRQIPIGFQGNSKDYYWFDYSRLNKL
EQLLTDKIDNYIIFYNYDPEFDEIYKICKKLDYKIDIWNGNKKNITNYLE
FLNLDQNNKNSSKKRVIIANYFSASTGNNWQEYDKTILFSLATYGYHIQA
LKRNHRIGTKNTITYYLFLQDNYLDKSMWGSIQKRQIYNTEIFIKTTKEF
NKLKSQYKNLTFNF
>MSC_0028 csp, COLD SHOCK PROTEIN
MNTGIVKWFNDEKGFGFITNDSDNKDVFVYYSNINVNGYKALEQGQKVTY
ELNKGIKGLEAFNVSITNK
>MSC_0469 deaD, ATP-dependent RNA helicase
MKFTDFGFKKYINDTLDQIEFIAPTSIQQKVIPLLKKHKNVIALAHTGTG
KTHSFLLPILNNLKLEENNNYAQAVIISPTRELSLQIYQNTKLFFKNNPL
INCNLFIGGEDISKNIEQLEKKQPHIVIGTPTRLKELYDLNKLRLTTTSY
FIIDECDMIFDLGFIEDVDYLISKINQDVTIGIFSATISQQLSVFCKKYI
KNAHFIDDSQNKISTSNVKHILIDTKNKELEQSLIQIINSINPFLCIIFV
NQKDEISKIVEILHKNNIKQVAELHGNLQPRLRLSMLKKIQNNEFKYLVA
TDVASRGVDVKGVSHIISINLPNDLTYYIHRSGRTGRNNSTGYSYIIYNL
KNKIQIEELIKKGIEFETKKLIDNQLVDIKTNYKKVKVFKELDAESKQVI
NKYKNKKVKPNYKKKRKQELDKIKQKIRRKHIKENIEKIKKAKYQKRRAE
LFD
>MSC_0833 fruR, transcription repressor of fructose operon
MIKEQRYKEILKKLEINELLSLDFLSTDLNIPLTTLRRDLKELEHRHKVI
RTHGGVQLNKSKLIVEDYLDNKINLNVQAKQQIAIKALKKIKPRTCIFLD
SGSTTYYLAKILDANLDLKIVTNSILNVQELSKNNHQNIYLLGGKYQVVT
SSILGYQAVNDLKNYAFDLSFIGINAVDDQTNIYTTSDDHAQLKIQVIKN
SNKSYGLVDQSKKHSKSFYKFATNLELELIED
>MSC_0875 glk, GLUCOKINASE
MAPNIENGWFNYDLKTEAEFLFKKPVYVINDVNAAALGEYRKGSGLVYKS
GLFYWLGIGIGGAIICDGKLISGSHGFAGEFGHGGSNNHNLKCNCGLNNC
IEKVCSATTIPNSLLTILKNKYSEFYNKHFSNIKDLDMKLLFEIYNNLNK
PIELKNSLLEIYDELFNHISLLIHALDPEVVVIGGGGSLAGNNLLELFQL
GVKNKLTDSYKDIVDFKLALLKNDAGMIGAAFYALEQSLKTN
>MSC_0863 glk, GLUCOKINASE
MLVGITAPGFVDHNKGIVVMAPNIENGWFNYDLKTEAEFLFKKPVYVIND
VNAAALGEYRKGSGLVYKSGLFYWLGTGIGGAIICDGKLISGSHGFAGEF
GHGGSNNHNLKCNCGLNNCIEKVCSATTIPNSLLTILKNKYSEFYNKHFS
NIKDLDMKLLFEIYNNLNKPIELKNSLLEIYDELFNHISLLIHALDPEVV
VIGGGGSLAGNNLLELFQLGIKNKLTDSYKDIVDFKLALLKNDAGMIGAA
FYALEQSLKTN
>MSC_0251 gntR, Transcription regulator gntR
MMTEKQIIRTIKKISLDTDHRFCFIANYVLSNLDSIEKMTINQLAKATYT
SVATINRFVKFLNLDGYKELVHIIKYFKNSLQGDQITYSLTSNSLILNAY
NNIISSLDETSKLTIEQQDTIKNLISKIKKALKIAVFAVGGTFNIAKDFQ
QKLLRIGFNITAVNDFHNGYLLANQLNNNDLAIFVSYSGETLDLIKLAQV
CIKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRLVSTTSRFSLLFA
LDLIYIFLLSTDLKNYTELLEKTMISKF
>MSC_0296 greA, transcription elongation factor
MSKEIILTQEGLEELKAELKHLLKVVRPKVIEELVEARNQGDLSENADYD
AARNRQAEVEARIKEVETLINRAKVIDDSKTHSTGEVKIGSTVQFVSSLD
NKLKEIKIVGAIEADPFSNLISNESPIAKAIIGKKVNTTVEIKDISKPYK
ITIKSIK
>MSC_0612 hrcA, heat-inducible transcription repressor HrcA
MLTNRQIKILQTIVEEFIKTNQPVGSKRILELLNMKISSATIRNESATLE
HEGYLEKQHTSSGRTPSTKGYRYYVDNIMKLDSADYTRLKIYLNQLLDLR
KYDIDKTINYASEIISELTKMTAVVIKKQNIKDIKLKKIELILLSEFLAS
VLFIFSDGDVQNKMFNLKDVALSDLKIAIKLFSDVLVDVKLDEIDQYLND
LKHQLFLSIKQYDYVLNTFINTILESKNEQKETHGMRYMLENPEFNDTNK
LKNAVKLVEQLSPFDWFNIAYESNKNMNKIAIKIGNEIDQINDDISMIAT
ELKIGNSSTVLTLVGPKRVDYNQVNQLMNLIIEIINTKEN
>MSC_0751 lacI, transcription regulator, LacI family
MKNKKISISTIAKECNVGVGTVSRYFNNGYVSDQKKELIKKVVEKYNFSP
NFAAHSIKRKIQEVYFLIPDLTKSNTFVIKKILKYLQLEFSETMVFVIQT
TYNQETYLKYLKK
>MSC_0352 nusA, transcriptional terminator
MLNGTELLESIKLIEKEKGISKESIINGLKEGLQKAYERFYDTDAIIKID
INENTGLITMHQELKVVDDEQLDDDWLEITLSKAKLKNPDIQIDDTIYKP
IEFSEEFSRMVVNQVRQIFQQKIREAERARIYEQFVSLEGEVVQAKIVGM
NRENNYVLDINGTTAYLWKSKTINNEIFQINEIIDVYIEVVEKESKLSQI
SISRTAPNFLTKLIEREVPEVRMGIVEIKAVSREPGKRSKVAVITHNNNV
EPIGAIIGVGGNRINRISDILKGEKIDIIRWDEDQITYLINAMTPVKVIS
INKIGDEYDIVVPDTQLSLAIGKQGVAAKLIASLLKTKINIFSYSTALKE
NMDILWNGDTTKQEVETNTYIPKTKTTKKEEKPVITTIKKPVKQTIKKEE
NQIDVDALIAFQAEVEHEQELKDQEELLKQEYIYKEYENNFNDFENEKEI
VLAEKQLESQNQIIKEPVVEVQEVEIEKQSKTEDQIIENKQPETRTEVET
KPNTVEQVNKLNTNKPNNKFEQNRFSYKKQKQKEEELELDFDIKNEPDID
EIDANLKAFNDAILKQEDDEDLDIDLDDYDKYYD
>MSC_0102 nusB, transcription termination factor nusB
METKISFSKKRKLLIQAFYKYELLNASIDYIHQDILDDVQNIKNKDVLFE
INQISEKQTDLINHININISSSWKWDRIPAVIRAILIVGTYEILYTNTPK
SVTINEMVKYVKEIEPDFDYKFVNAVLDKLVK
>MSC_0962 nusG, TRANSCRIPTION ANTITERMINATION PROTEIN NUSG
MTYEEIKQLEDEILEAKGQWFVISCQTGHEEKVLGDLQQKIKSASIEDEV
FSIKISKANLVSKSEKSSIKNKFPGYIFINMIMSEKAWFLIRNTPGVTGF
IGSSGRGAKPSPLTTEETLNILVPNLEEIEQAHKQEQQEENLKNEAVNKK
ELFTANFKVGDVVRVKSGIHENEEGTVKDMDFSKGVAFVAIEMFGRWTTL
EVSFKNVEPIKEY
>MSC_0307 pkn, serine/threonine protein kinase
MPKTKKDLRINKEELLNQVVNNRYKLIKYLNSGASAVVFKALDLDASVLE
KKDVFIAVKIILKAKNKNIETIKKRLFLETNIFAKLSFSKNIVKMKDVFS
WQNYYVIVMELIEGVDLNKKFNAYNNVLSNKEFIYYFLEITKGLKEIHDN
NIIHKDVKPANILITNDSKVRISDFGISIIKSIILDDHHNHISPGTPRYT
APEQFINFESRKDALYFESDIYSTGVIMYEFLTGSMLYLNYGSNHTSSKE
KELTNFQQHILKDITRPREINPNISQALENIIMKCLAKDYKNRYHTFDQI
IKDLEQAKQQPDVNIDFPNMWWEDENYLNIKNNNTLKYKYFFKNTNFKYF
LFWISIVISLFIIFLIVLILK
>MSC_0023 recG, probable DNA recombinase recG
MENDKLNNAGYYLFSKNKPLTVKLGKFLTDERITLIDNIRFEGNIFECID
RSIEYILKNINQVYVYEDLRRVPRPEIPVKAIREIIVNSFVHMRITSGDY
NEISIFPSEVRIYNPGHFPLNTIPANFAEGKISSKPMNPLIATTLYKNNL
VENFGTGFQTVFSLCDKYNIKYSYDISNFGFTFSFYRKKLMMSFWVFMKI
VIV
>MSC_0475 relA, GTP diphosphokinase
MHNKYNYISFDYREIKDFKDLLNELKKYIKNKSELERIEQAYKYAFKCHF
NQTRKNGDPYIYHPLSAAYYLAQWRMGPNTIIAGLLHDILEDTPIQKEEL
VELFNEEVANLVESVTKVSFFAKENRQQIKSKYLRKLYLSMSKDIRVIII
KIADRLHNIYTIKNLRSEKQKIIAQETLEIYSAIAHRIGMKSAKSLLEDR
SFEILNPQEFKKITDLFNSDMQNRQQIINDIIINLEQYLKKEKNIKIISI
FGRPKTIYSIYRKMNVIGKNFEEISDLLAIRIIAKSIDDCYKILGFIHQK
YIPLAGKFKDYIATPKNNVYQSLHTTLSDANGNIFEVQIRTEEMNQVAET
GAAAHWRYKEGEIIDIAKKQKEIDEKIDIFSRILDLDKSEDQQSSIEQSI
KDDLFTASIYVLTPNGAVITLPYGSTVLDFAYRIHTEIGEKTIGARVDGV
FLPINTVLKSGEVVEVKTSPKQEPTHEWLKIVVISNARNRIKKYLQKKIN
EETLDKKDQQKELIRKTEANINAYINQKDWKWKKKTADEILETVKTMDYN
SLNDFLLDVAKGEFTINEAAEKVFIKQNYSKDDEAYASIKSKIIYDTTIK
NDILVDGIKNIKTTLASCCMPIPYEEVVGFVTKNNGIKVHLKECINIDWT
NMKSRLVVVQWNEAVAEKNTYTTKLKYFGIDRNKLLYDISKIISGLKVSI
INANIFTDEKSLLSSGVITIKIKNSNQLTQTISALRSIPGINGVERGISN
>MSC_0479 rnc, ribonuclease III
MNIKNFFEKYNIKINNEKLFNEALTHNSYANEHKLKYSYQRLEFLGDAIL
QMYVSRFLFFNYSKLSEGELTRLRASTVREETLFRVAKDINLGALVKLGH
GEYITKGYEKPSILADVFEALTAAIYLDQKEDGLVTWLGQTLFKYIKDSN
FINDTKDFKSELQELLQSEKRSDLKYIIEKEDFFANENKILYTVSVNLNG
QKFGVGKGFSKQEAEQNAASDCLSKLKKPTSN
>MSC_0856 rnr, Ribonulease R
MESKIIEVLKTNKHKVSLNKLLTYFNALDYSLIKNYLDQLEKNNKITISL
ENNIYLLDQIYKKGTIKLNPKGFGFINDINKIDGEDHFIARVDLNNSIHQ
DEVVYILKQEEDNRLKAIVIELIKRNKIYLIGEINRSFDKRFLDFIPNDK
SFDSFRFVIVNKNEFKYEEFNIIKAKIISCKERKIFIRLIKIIGNSKKAS
DRILAIAEEFEIKTSFDKQTLDNAKQINLSTDKLEKEFLKRQNNSLVNKT
IVTIDGIDSKDLDDAICVEKLKNNNYKLFVAIADVSYFVRYKTALDKEAL
LRGNSTYLANKVIPMLPNILSDDLCSLNPNTKKLVFVCEMEFDNNANMLN
KKVYESVIISKARLNYDEVNNYFKTKTWTHCEQTKKMLDVAYELYKKLED
LKAKKGTISFDVREPKIILDKNLNVIDIKTKTADQAEKLIEQFMVSCNEA
VAELIYQKDLPFLYRNHNKPDEDELINWYKSLKTFGINPKLTNKQVLDPI
FINHTLTQIKEQIKDETEVELLNISLLRYMDKAKYGLENIGHFGLASDCY
THFTSPIRRYSDLLVHRYLKQYLITKDLEKTSLENNTNYINKVSNIINDT
ETKSVECEREVIKACMCEYMLNKINTTYTATISAVLKFGIFIQLDNLVEG
LVHISNMNSDLVYDETNRILIKPDNTYYRIGQKVKVKLISVDIKKRTIDF
VLIE
>MSC_0721 rpoA, DNA-directed RNA polymerase alpha chain
MKQFVRPEFILLKEGQDKNYGKFSVSPLERGFGITLGNAIRRTLLAATPG
ASVYAIKIAGATHEFTSIPGIIENVTKIILNIKQLVLKIDTSIYSDDEVV
QLRIRSDIQGPIYAGDLDIPAGVEILNKDLLIATISEGGVLDLVLYAKNS
RGYKTFKDNKNEKNIEPGMITIDSNYSPIIKVAYSVDSAKIGRAIDLEKL
ELEVTTDGSITAIDAISIASRILVAHLEFFIDLNREISVLEVIGTNQTDD
KELDRTVEELDFTQRSLNCLKRAGINTLRELVSKNEDEIGSIRNLGRKSL
KEIKDKVASLGLAFRQS
>MSC_1008 rpoB, DNA-directed RNA polymerase beta chain
MAYKIRKINRNVERRDYTKVSMNLSLPNLIGIQTETFEWFKTKGIQEVLD
EFFPILSFDGSSVLTLENWGFKEPRLSVRQAKEESKIYDAPIYANLKLSV
NKTEEIQKEFDGVVLDDALQILSKWLEEKTVSKNITFKQQSQNSYFFELT
IKKSEKPDLIQIDIIEDKKTSLICNVSIYKSGEVFLGDFPLMTEAGTFII
NGSQKVIVSQLVRSPGAYFNKELNRKTGEMIYFADIIPSRGTWLEYETDS
KKIGNDAINPLYVKIDKSRKTTATSLLLAFGISKDDILNIFDNDEVLVET
LQQDSIIGDFKIDWSNQVQEIYKKITQGETATSEGASKFINSILFDKRKY
DLTKAGRFKLKQKLSIKNRILNRVIAEDIVDANNNVLIAKDTEVNKHNIK
QISEILDQDVMSIDLNYLSDIPGTRKVQKIKVYKDSELKTDTTCLIGLTS
SSNEEFITVADILSTVSYLLNLKYNIGEIDDIDNLGNRRVRTVGELLQNQ
FRMGLNRIDKNVKEKLATSDLYKVKTSTIINAKPLTAIIGEFFNLSQLSQ
FMDQINPLSELTNKRRLTALGSGGLSRDRAGLEVRDVHPSHYGRICPIET
PEGPNIGLINNLSTYARVNEYGFITTPYRKVINGIIQNDQVEYLTADQEK
NFIIAQSNVNQDENGKILDEIIVSRFNGDDYMAKVEEIDYIDVSPKQIVS
VATSGIPFLENDDANRALMGANMQRQAVPLIKPESPIVATGIEFEAARDS
GEAIVAKEDAIVKYVDSKTIITDGESGIRTYILSDYERSNNGTSLTQSPI
VKVGDVVKKGEIIADGPSMDQGELAIGQNVVVAFSTYNGYNFEDAIVMSE
RIVIDDRFTSTHIDEYTLEVRNTKQGQEEVIREIPNMSEQAKRHLDAEGI
VAIGTEVKVGDVLVGKVTPKGQVQLSPEDKLLHAIFGEKSRNVKDNSLRV
PNGGEGIVQSIKRFKAKSALNPDGIELPADIIEVIKVYVVQKRKIQEGDK
MSGRHGNKGIISRILPVEDMPHLEDGTPVDIILNPQGVPSRMNIGQILEI
HLGMAAKKLNQKVITPAFEGLNEKELEEIMAEAGMTNYGKVTLIDGQTGE
PFDKPIAVGVMYMLKLSHMVDDKIHARNVGPYSLITQQPLGGKAQNGGQR
FGEMEVWALEAYGAAHTLREILTIKSDDIKGRSKTYEAIVRSKKIPEPGI
PESFNVLSKEIMGLGFNMYMIDETGEKSVINAYDKKNFDADNYEDDEILV
KTDTLYIDDEDVDAEFEDLTYVDENDILRSFESENDIDEEE
>MSC_1009 rpoC, DNA-directed RNA polymerase beta' chain
MENLNRKKAIKIELANPDTIRSWSHGEVLKPETINYKTLKAEKDGLFDER
IFGPTKNYECVCGRYKKANPMNKGKKCEKCGVELTESIVRRERMGHIELE
EPVTHIWMLKVAPYRIAAILDLKAKELEEVVYFVSHIVLEQGNQKHFVEK
EVLDLGSSRITKTREKLQLTILDVIDLINDPNHRDTKKANRLLEELKNTA
VPFSIDEATSLISKYTGAKFGIGARAVEYLLEKVDLTKEIEAIKIQLENS
KKTPNERTKLLKRLETFDSLKRSKQRPEWMVMRVIPVIPPDIRPIIQLDG
GRFTTSEINDLYRRIIIRNERLKKVKEMGAPSIIVNNEKRMLQEAVDALF
DNERKPKPVQRKNKRPLKSLTSVLKGKQGRFRQNLLGKRVDYSARSVIAI
GPDLKMYQAGLPREMAITLFKPFVIQWLQDHEYAENVKIAEKMLLQNDPK
VWEALEQVIKDRPVLLNRAPTLHRLGIQAFEPKLVKGKAIRLHPLVTTAF
NADFDGDQMAVHVPITKEAVAESRALMLGSSAILGPKDGKAIVTPGQDII
LGNYYLTTEEKNAKGQGMIFSSLDEAFMAYDSGQIHLNSLIGIALSALPE
QKFSDKNQRLNSYLLTTVGKLYFNQIFDDNFPWINSNNIWNAKEAVKEFI
YYFSQDINNVIENIQVQQPIKKKELSLIIERYFETHGARKTAEMLDKMKD
LGFSFSTKSGTTISAGDVVAFTHKYDEFKEADQKVEQITDFYNMGMLTNS
EKKRRIIEVWSDVKDKIQDELATVLRKDVKNPIFVMVDSGARGNISNFTQ
LVGMRGLMNDTKGDIKEIPIKSSFREGLTVSEYFVSTHGARKGMADIALK
TADSGYLTRRLVDVSQEIVVVNEDCEPSKGFEVSAIIDTKHDNVIVPLKD
RLVGRFTFEDIYDDDKNLVAFANTLIDKNIAEKIIMSGISSVVIRSVLTC
DNKRGVCQKCYGLNLATASVVNIGEPVGVIAAQSIGEPGTQLTMRNFHTG
GVAGNVDITQGLPRIKELLDVTTPKGAVAIISEVDGVVSEIEDYNGVFVI
NIVTENEEVKKYKTEFNSVLRVEQGSSVVAGQKLTEGAIDLHQLLEFGGI
QDVQNYILKEVQKVYRLQGIEISDKYIEIIIKQMLNKVKITDGGDSDLLP
GEVITIQNYKEVVQDCIVKSIRPPLSKAQIFGIKKAPLESSSWLSSASFQ
DTARVLTRAIIKGKEDKLEGLKENIMLGNLIPAGTGLTGTQEVEQLAEQY
HNNEY
>MSC_0466 rpoD, RNA polymerase sigma-A factor
MKWNWYSEKQKEKEVIMTKFNNKSELKKIASFNDFLDYTVSFANKNNNEI
SSEDVLEVFANIFPNASDNESEKILDVLQQKGIVFSDLVDDDIEQEELEE
VEEEIEDLNLEELEELENLEYLDDLDFDLDSTSNNLDDYDENANDDLDEF
KEAKSAAIKGRKSAKSSNHMKYRVGGISNETKIQDIIKTYFYKIGQAPIL
TKEQEIIYAKMAVSDDPEDVQEGRNKLIESNLKLVISVARKHLNRGLDFA
DLIEEGNIGLMKAVDKFEYEKGFKFSTYATWWIRQAITRAIADQARTIRI
PVHMVETINKLARVERQLTQELGREPNADEIANRVGEGITGDKVIEIKKL
SIEPVSLEKPFGDEDDTHFGDFVEDKDMVSPNEYTEKKILKEVMDKVFED
MPPREEKVIRMRYGIVPTRLRTLLRLTQECNDTNAKELKQAIEELDIHLD
TPIEKVRKFNNQIINNNLAKYDSARTLEEVGKELNVTRERIRQIEAKTIR
KLKQPSPNNKSGKTLKEFYKGY
>MSC_0841 suk, Sugar kinase, ROK family
MRLFSMVLVFDVGGMSTKIALIDSKTDQIIIKDQIIYSNFINGKSLLFEI
KKKINQFKNNNSKAICISSCGIINSISGEISGSSAIKDYYLINYKKDLKE
FNLSIFIENDANCAAICESQIGVAKNNKNAVFLVIGTGIGGAIIINKMLY
KGSDLFAGEFGCSLVKIQNNQYINVSESYSAKAIETNYFTLTNKKLTAKE
IFNKYKEDKVAKKVINKIINGLCKLMINITTIIDPEVFVIGGAISQNQLF
INLLNKKFKKYMTMSNINLDIKIKPAMFFNDANIYGAYLLYKKDLYV