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# Candidatus Blochmannia floridanus

>Bfl448 cspC, cold shock-like protein CspC
MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLSEGQNV
EFEVQDGHKGPSAVNVTSL
>Bfl109 deaD, Cold-shock DEAD-box protein A, inducible ATP-independent RNA helicase
MLDSENSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMA
HTGSGKTAAFLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKS
LSHIINIAVLYGGQNYRIQFNDLKKNPHIIIGTPGRLLDHLSRGLDISKL
KTLIIDEADEMLRMGFIEDIEHIIRYVPTHRQTALFSATLPVSIRKLSYK
FMCNPKEIYINPSISACADIKQSYWLVHGISKHEALMRFLEVEKFEAVII
FVRTKSATLQISEILQRFGYNSAALNGDMNQSVRCKTISRLRCGTLDILI
TTDVAARGLDINRISFVINYDIPCNYNAYVHRIGRTGRAGRSGKSLLFVE
RQEYHLFNYVIKRRVLNSNIVKVKCPTSNDLVRCRLKKFTDKVVNNLESK
DIEQYQSLLGKIKIDLDITIEKLAAILLKIAQGSQSLIISSDDQRINKKI
IYYNKSDLKKNSAHKNKSYFVHSRRSIKCSNVYYKKK
>Bfl096 greA, transcription elongation factor, cleaves 3' nucleotide of paused mRNA
MTRKIERIPMTQNGVEKLRKKLEYLKNVLRPEIIKNISEARKHGDLKENS
EYHAAREQQGFCEGRIQEIEFKLSNAYIIDVTKVAEEQKVVFGVTVCVEK
LDTQSKQVYRIVGDDEANYKKNMISINSPIARGLIGNTIGDIVTINTPQG
NITYKIIQIQYV
>Bfl103 nusA, transcription pausing; L factor
MNKEILAVVEVVSNEKAVPKEKIFLALEMALAAATRKKYSQDIDIRVSID
RKSGKISTFRRWVVVNQVIQPTREMTLEAAQLENLEIKINDYVEDIVESV
TFDRITTQTAKQVIIQKIREAERMIIIEQFLSRQGEIVTGIIKKISRYSV
SVDLGNNAEGIIKREEMLPRENFRVGDRIRGILYLVKTDSKGSNLFISRT
CTEMLIELFRIEVPEIGEELITIQAAARDPGSRSKIAVKTNDKRIDPIGA
CVGMRGARVQAVSSELGGERVDVILWDDNPVQFVVNAMIPADIVSMIVDE
DKHTMDIAVEESNLAQIIGRNGQNIRLISQLIDWELNVMTVVELEKKRQS
EDRNILDIFMRVLNINEESAKVLIDSGFSSLEELAYIPISELLSIGVFDK
EEIDLLRFKAKDALKDLSNKDNNDDNSTIMNSVSELLKLSSLKYEIALKL
INYGIYKLEDLAEQDIVSLSGIKDLNLTEEEIGELIMEARNICWFNHDSN
K
>Bfl236 nusB, transcription termination; L factor
MKSITRRFARLCALQALYAWQLSKNDYTMISNYVIKIQNIQNFNISYFLT
LYIGVIHTIKELNTLMIPYLSRGLKAIDYIEYSVLLIALFELTQCCDVPY
KVVINEAIELAKIFGSEKSHKFINGVLDKIITEKLYKG
>Bfl562 nusG, transcription antitermination protein NusG
MLDILRKRWYVVQAFSGFENQVARALKEHIKIKDMSSMFGDIMVPTEEVV
EMRSGQRRKSERKFFPGYVLVQMVMNSSSWHLVKNVPKVLGFVGGTCDKP
APIGDKEVDAIICKLKQIGDKPRPKTLFEPGELIRVSDGPFSDFNAVVEE
VDYEKNRLKVSVSIFGRSTPVDLDFAQVEKS
>Bfl586 rho, transcription termination factor Rho
MNLTKLKNIPVSELVTLGESMGLENLARMRKQDIIFAIFKQHAKTGEDIF
GDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGK
IRPPKEGERYFALLKVNDVNYDKPENARNKILFENLTPLHANSRLRMERG
NGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSISHNYP
DCVLMVLLIDERPEEVTEMQRLVHGEVIASTFDEPASRHVQVSEMVIEKA
KRLVEHKKDVIVLLDSITRLARAYNTIAPSSGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIVATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIA
EKRVFPAIDYNRSGTRKEELLTTPDELQKIWILRKIIHPMGEIDAMEFMM
NKLSMTKTNDEFFDMMKRC
>Bfl540 rnc, ribonuclease III
MQCIKCIEINLLQKKLGYFFHTVDLLLRALTHRSFSNKHNERLEFLGDSI
LNYSITNILYHRYNHMDEGDMSRIRSSLVCSRTLVELAKEFKLGNCLKLG
QGELKNKGYNRESILADTVEAIIGGIFLDSNIKTIEMLIAFWYQFRLNKI
DLEDKQKDPKTRLQEYLQHHHLPLPIYCINQVQGQAHDQIFIMNCQVSSL
KYSVMGRGSSRRKAEQDAAENALKFLIEINND
>Bfl216 rpoA, DNA-directed RNA polymerase alpha chain
MQSFEKEFLKPRSINIEKISEIHSKITLEPLERGFGHTLGNALRRILLSS
MPGCAITEVEIEGVLHEYGTKEGVREDVLEILLNLKTLAINMYVKDSIVL
TLKKTGIGPVIASDIEYDSSIISIVNPNHIICCITDQDTSIIMRIKVQRG
RGYVPAFSRFSSDDQHDLPIGRLLLDACYSPVERISYTVEAARVEKRTDL
DKLIIDMETNGTIDPEEAIRRAATILSDQLSSFIDLKDVHQPEVKEEKPE
FDPSLLNLVDDLELTVRSANCLKAESIHYIGDLVQKTEVELLKTPNLGKK
SLTEIKDVLASRGLSLGMRLDNWPPKHLSEQ
>Bfl557 rpoB, DNA-directed RNA polymerase, beta-subunit
MVFSYTEKKRIRKDFGKRPQVLDIPYLLSIQLGSFQKFVKKDPEGQNGLE
SAFRSVFPIKSYNGNAELRYLDYKLGEPVFDVKECQIRGMTFAAPLRVQL
CLVIYERDGSAYNTIKRTQQQEVYMGEIPLMTDNGTFIINGIERVVVSQL
HRSPGVFFDSDKGKTHSSGKILYTARIIPYRGSWLDFEFDLKDNLFVRID
RRRKLPVTVLLRALDYTNDQILNTFFNTVVYEFKDDLLFMNLVPERLRGE
TVSFDIKANDIIYVERGRRITSKHINKLKADNIIKVEVPLNYLMGKVIIK
DYLDIKNGELIVAANTEISMDILHNLVKSGFNIIETLFSNDLDYGNYISE
TLRIDSTVTRFDALVEIYRVMRPGEPPTKEAAEYLFESLFFLEERYDLSD
VGRMKFNRSLQRDDISGSGVLTKNDIIDVIKKLIDIRNGKGDVDDIDHLG
NRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDLDVLTPQDLINAKPIS
AAVREFFNSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRD
VHPTHYGRVCPIETPEGPNIGLINSLSVYARTNKYGFLETPYRRVCDGKV
SNDIHYLSAIEEGDFIIAQANTNLNKDGQFIDDLITCRNKGESGLFRKDQ
IDYMDVSTQQIVSVAASLIPFLEHDDANRALMGANMQRQAVPVIRSEKPL
VGTGMERSVAVDSGVTVVAKRGGMVKYVDASRIVIHVNVNEISVEEAGID
IYNLKKYVRSNQNTCINQRPCVELGELIKKGDVIADGPSTDLGELALGQN
MRIAFMPWNGYNFEDSMLVSERVVQEDRFTSIHIQELSCISRDTKLGPEE
ITSDIPNIGETALSKLDEVGVVYIGAEVVGGDILVGKITPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNGICGTVIDVQIFTRDGIKKDKRALNIE
LTKLNQIKKDLGEELKIFESALFDRVYALLISSGVKKESLLDMNRCAWLN
LKLKDITKQNQLLQLSHQYLDLKRIFEEKISIQYQKITQGDELAPGILKV
VKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDEYGVPVDIVLN
PLGVPSRMNIGQILETHLGMAAKGIGDQINLMLQQHQEINKLRKFIQKAY
KLGVGVRQNIDLNTFSDLEVLRLAKNLKSGMPIATPVFDGATEQEIKELL
QLSGLPTSGQITLFDGCTGEVFERKVTVGYMYMLKLNHLVDDKMHARSTG
SYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVN
GRTKMYKNIIDGNHMMEPGMPESFNVLLKEIRSLAINIELDD
>Bfl556 rpoC, DNA-directed RNA polymerase, beta-prime-subunit
MKDLFKFFKTHSNGKIEEFNTIKIQLASPDMIRSWSFGEVKKPETINYRT
FKPERDGLFCSRIFGPIKDYECLCGKYKRLKHRGVVCEKCGVEVTQSKVR
RERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVVE
GGMTSLECRQILTEEEYLDALEEFGDEFEAKMGAEAIQILLKNMDLKNEC
ECLRAFLEDSHSETKRKKVSKRIKLIESFILSNNKPEWMILNVLPVLPPD
LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPEIIVRNEKRM
LQEAVDALLDNGRRGRAITGANKRPLKSLADMIKGKQGRFRQNLLGKRVD
YSGRSVITVGPYLKLHQCGLPKKMALELFKPFIYGQLELKGLASTIKAAK
KMVDREESVVWDILEDVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQ
LHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEP
IIVPSQDVVLGLYYMTRDRINSKGEGMVLSNPKEAERLYRLGIAELHARV
KVRITEYKLDNHGRWVDKINFVNSTIGRAIFWMIVPKGLSFDLVNKVLGK
KSISMMLNHCYRVLGLQSTVMFADQIMYTGFTYAARSGASVGIDDMIIPT
KKVDIIDAAESEVAEIQEQFQTGLVTAGERYNKVIDIWASANERVSKAMM
DNLATETVINSHGLLETQASFNNIFMMADSGARGSAAQIRQLAGMRGLMA
KPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
RLVDVAQDLVITQDDCNTFAGIVMSAIIEGGDVKESLRERVLGRVLAEDI
LKSSNDSDVSNSEVLIKRNILLDEFYCDILDEYLIDVVKVRSVVTCDTDF
GVCAKCYGRDLARGKLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAAS
RVASESSIQIKNQGIVRLKNVKAVINGQGKLVITSRHAELKIVDQFDRAK
ESYKIPYGSIVMKKDGELAVSGEIVAYWDPHTMPVIAEVSGFVKFIDMVD
GQSVIHQTDDLTGLTSIVVLDTSERVSSAKDLRPTLKIIDVNGYDIFIPG
TDISAQYFLPGKSVIQLVDGSRIISGDVLARLPHETSGTKDITGGLPRVA
DLFEARRPKEAAILAEISGVISFGKETKGKRRLMICSTDENGGENIYEEM
IPKWRHLNVFEGEYVERGDVISDGPESPHDILRLRGVHAVTNYIVNEVQE
VYRLQGVKINDKHIEVIIRQMLRKAIVIRSGDSDFLAGEQVEYARIKIVN
QTLEREGKVKVSFVRNLLGITKASLATESFISAASFQETTRVLTESSVAG
KKDDLRGLKENVIVGRLIPAGTGYAYHQKRILKRYSESYSDSKLKENLIE
TIPVTADEASANLTELLNAT
>Bfl056 rpoD, RNA polymerase sigma-70 factor
MDHNPQSQLKLLVTRGKEQGYLTFSEVNDHLPEDIIDSDQLNNIIQMMND
MGIQVMEEAPDSDDFLLTENCGTSNNDEEDATEAAVQALSHVDTDLGRTT
DPVRMYMKEMGAVELLTREGEIDIAKRIEDGIHQVQCSVAEYPEAITYLL
EQYKRVKTGEVRLSDLVTGFVELNLEHDTLSTKTIHDGYITPEIINSPII
IDDEENTENDDDNNVDPELARKKFTDLQKQYEKTRITIKYNGRDHHQSLL
EILKLSEVFKQFRLVPKQFDYLVNNMRSMMDRIRLQERLIMKLCVDVSQM
PKKKFINLFSGNETSKDWLNKALSLNTSWSQKLHNVDSKIQQSLYQLHQI
EKETGLTIEQIKNINKRMAIGEAKAKRAKKEMVEANLRLVISIAKKYTNR
GLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQA
RTIRIPVHMIETINKLNRVSRQILQETGCEPTPEELAERMFMSEDKIRKV
LKIAKEPVSMETPIGDDEDSHLGDFIEDTNLDLPLDSATSDNLRAATNDV
LSGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRK
LRHPSRSEILKSFLDDD
>Bfl626 rpoH, RNA polymerase sigma-32 factor
MIKDVRKNVTLASQGTLEAYIRAANLYPMLTVEEEQKLAKNLYYNGDLNA
AKKLIVSHLRFVIHVARNYSGYGLSQADLIQEGNIGLMKSIRRFNPELDV
RLVSFAVHWIKSEIHEYVLKNWRIVKIATTKAQRKLFFNLRKTKQRLGWF
NEGEIEMVAKTLHVTCKDVREMESRMAAQDMTLEQPYLDEDDKNILSIPM
LYLQDKITIIDDEEEWIDQVSNKLNIALNTLDKRSQHIIRARWLNADNKT
TLQELANQYGISAERIRQLEKNAMKKMKLILNN
>Bfl617 rpoZ, DNA-directed RNA polymerase omega chain
MIEKKIVEEINSRFDLILVASKYARSIQQKENSIQLSSCKHKCTVIALQE
LEKSMINIDK
>Bfl369 slyA, transcriptional regulator SlyA
MESSLGSDLARLVRIWRALIDYRLKPLKLTQTHWITLHNIYQLPPDQSQI
QLAKAIGIEQPSLVRTLDQLESKGLIVRNICSNDRRAKRITLTELAKPVI
NQVNQVINVTRNEVFYGLRVEEIQQLNNIIAKLERNIINLYNKT
>Bfl615 unknown, putative transcription regulator protein
MNRLTDIANMVESLSRIYHRLRKEINGQLINEGLSMSKMKILHLITTGKT
SATDIKNYMGFSSRTVVTVLDALEKDEMLRRQQSLTDRRVKYVHITKKGQ
EKLIIAKCTYNIILDRIFAPLSDVQLKNFYEVCNLLEIQQKIAQ
>Bfl521 ureG, putative urease accessory protein G
MSNDKAKHPMKVGIGGPVGSGKTALIEVLCKKMKTDYQLAVVTNDIYTKE
DQQILINAHALESDRIIGVETGGCPHTAIREDVSMNLLAIEELIDKFNNL
DIIFIESGGDNLSATFSPELSDWNLYVIDVAAGDKIPRKGGPGITKSDFL
IINKIDLAQYVGASLDVMKFDTHTMRNNRPWTFTNLKTGYGIESVINFLR
EKKLINNKM
>Bfl038 yidZ, putative LysR-family transcriptional regulator
MNNFDFNLLVVLNALLEDNSVNLAAKKLNVTAPAISKSLNKIRILFNDQI
LVRSGTKLTPTPKAMALKENIKDLVNQIETLINSNIVFEPKYTNTSFTIA
SNSSIFFALNTILFRDIQSNTPNIFINLVNDSDYDDDFLRNNTIDLYVGE
MRSLNPEITIRTIYMSKSCLICRNHHPILSKHKNMDNLLKYPFIQTKHEY
LINTDETNKYFWSERNIVGITPDYITTINAVTHSNILAIIPNYILTLTHQ
LNTPLSNFNPDFDLGKKNIIQAWHSKNNQSASHKWLRDHTKNMLLTYINN
TSNHTLR
>Bfl390 yqeI, hypothetical protein
MKYIIHSNIAFDTTEYILTSLHDSHASIKLSTSAGRILEELIKNRNTGLP
VTREHLFTTVWKTHGLEPSNGNLNQQVSLIRKTLTLLGLNSSSIITVPKR
GLKINNQLIIEAVHNNSPNPQSTVNPIENQINNTPPLPNTILKNTITYVK
YILILTAMLIIIFSIGFIYLYNKTNNTKLYCCKEINSCDICDFPIILEFT
CNNYNALYSKTI
>Bfl251 yqgE, putative transcriptional regulator
MFKNEITNLQNHFLVAMPTLQDPLFKKSVVYICEHNDTGAMGIVINKPVE
KYTVETILKNLKITSTQRDPSVQLNHPVFSGGPLLNDRGFILHTPQTGFG
SSINISSQTMITTSKDILETLGTPNQPKNILVALGYSGWTKGQLEQELIE
STWIAVPADETILFHTPIFNRWNAAAKIIGVNMYNMNSQTGHA
>Bfl045 yrbA, conserved hypothetical protein
MYADEIKKILSKNLSLQEIYVFVDQDHYKIIVVDQIFVDKSKLEQHKMVY
APITKYIVDNKIHSISIYSFNPQEWKICRKYYIK