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2024-05-04 00:16:22

Gene list

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COG category: Transcription
Organism: Oceanobacillus iheyensis HTE831, HTE831

Number of genes found: 261

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Oceanobacillus iheyensis HTE831, HTE831
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
OB0045 transcriptional pleiotropic regulator of transition state geneschromosome CDS44806 276 - 0.376812
OB0063 transcription-repair coupling factor (TRCF)chromosome CDS60559 3522 + 0.371096
OB0064 stage V sporulation protein T (transcriptional regulator)chromosome CDS64225 534 + 0.378277
OB0073 transcriptional regulator (marR family)chromosome CDS72217 453 - 0.368653
OB0074 stage II sporulation protein Echromosome CDS73151 2457 + 0.380138
OB0076 serine:threonine protein kinasechromosome CDS76478 933 + 0.382637
OB0081 hypothetical conserved proteinchromosome CDS83731 768 + 0.341146
OB0090 transcriptional repressor of class III stress geneschromosome CDS109439 468 + 0.316239
OB0106 transcriptional antiterminatorchromosome CDS124553 537 + 0.376164
OB0154 hypothetical conserved proteinchromosome CDS161947 516 - 0.321705
OB0207 transcriptional repressor of PBSX geneschromosome CDS227578 366 - 0.355191
OB0209 sigma factor-like positive control facorchromosome CDS228398 513 + 0.389864
OB0228 RNA polymerase ECF-type sigma factor (sigma-W)chromosome CDS250169 564 + 0.374113
OB0240 hypothetical proteinchromosome CDS270794 447 + 0.319911
OB0249 hypothetical conserved proteinchromosome CDS280301 486 + 0.364198
OB0277 cadmium efflux system accessory protein (cadC protein)chromosome CDS310429 372 - 0.354839
OB0287 hypothetical conserved proteinchromosome CDS321292 471 + 0.352442
OB0289 transcriptional regulatorchromosome CDS322271 555 + 0.345946
OB0292 hypothetical conserved proteinchromosome CDS325711 444 + 0.328829
OB0294 hypothetical conserved proteinchromosome CDS328718 594 + 0.338384
OB0309 6'-N-acetyltransferasechromosome CDS341131 435 + 0.372414
OB0311 hypothetical conserved proteinchromosome CDS342446 423 + 0.349882
OB0320 transcriptional regulatorchromosome CDS347528 426 + 0.35446
OB0325 transcriptional regulator (ArsR family)chromosome CDS350824 303 + 0.29703
OB0328 transcriptional regulator (TetR/AcrR family)chromosome CDS352608 648 - 0.320988
OB0333 sugar kinasechromosome CDS356027 888 + 0.378378
OB0346 transcriptional regulator (TetR/AcrR family)chromosome CDS365117 573 - 0.315881
OB0354 hypothetical conserved proteinchromosome CDS373655 351 - 0.367521
OB0357 two-component response regulatorchromosome CDS376111 771 + 0.357977
OB0363 hypothetical conserved proteinchromosome CDS386229 519 + 0.373796
OB0369 transcriptional regulator (GntR family)chromosome CDS394239 711 + 0.357243
OB0379 hypothetical conserved proteinchromosome CDS403854 450 + 0.346667
OB0382 transcriptional activator of multidrug-efflux transporter geneschromosome CDS406314 765 + 0.356863
OB0394 hypothetical conserved proteinchromosome CDS420145 336 - 0.363095
OB0417 transcriptional regulatorchromosome CDS444197 216 + 0.333333
OB0425 transcriptional activator of multidrug-efflux transporterchromosome CDS451725 834 + 0.328537
OB0429 transcriptional regulator (GntR family)chromosome CDS455984 375 - 0.333333
OB0445 transcriptional regulator (MarR family)chromosome CDS471200 432 - 0.331019
OB0475 transcriptional activator of extracellular enzyme geneschromosome CDS503669 684 - 0.369883
OB0498 transcriptional regulator (DeoR family)chromosome CDS529625 774 + 0.351421
OB0513 transcriptional regulator (GntR family)chromosome CDS546902 378 + 0.338624
OB0517 L-2,4-diaminobutyric acid acetyl transferase (partial)chromosome CDS550685 324 + 0.342593
OB0520 transcriptional regulator (TetR/AcrR family)chromosome CDS552830 612 + 0.369281
OB0536 hypothetical conserved proteinchromosome CDS569474 549 - 0.357013
OB0567 hypothetical conserved proteinchromosome CDS597160 330 + 0.363636
OB0571 hypothetical proteinchromosome CDS600143 678 + 0.336283
OB0579 cold shock proteinchromosome CDS606231 198 + 0.39899
OB0584 two-component response regulatorchromosome CDS610553 684 + 0.350877
OB0594 two-component response regulatorchromosome CDS621066 690 + 0.350725
OB0603 transcriptional regulator (MarR family)chromosome CDS631167 453 + 0.346578
OB0609 ATP-dependent RNA helicasechromosome CDS636000 1488 + 0.392473
OB0612 transcriptional regulator (GntR family)chromosome CDS640434 747 + 0.342704
OB0613 transcriptional regulatorchromosome CDS641553 849 + 0.345112
OB0622 hypothetical conserved proteinchromosome CDS651366 285 + 0.4
OB0627 indirect positive regulator of sigma-B activity (serine phosphatase)chromosome CDS653946 1014 + 0.351085
OB0630 RNA polymerase general stress sigma factor (sigma B)chromosome CDS655820 792 + 0.369949
OB0632 hypothetical conserved proteinchromosome CDS657582 2175 + 0.370575
OB0636 transcriptional regulator (tetR-family)chromosome CDS664955 618 + 0.307443
OB0641 transcriptional activator of extracellular enzymechromosome CDS676855 678 - 0.387906
OB0677 transcriptional regulator (TetR/AcrR family)chromosome CDS715262 567 + 0.301587
OB0719 transcriptional regulator (TetR family)chromosome CDS765010 594 - 0.321549
OB0722 transcriptional regulator (AraC/XylS family)chromosome CDS768593 864 + 0.34375
OB0757 hypothetical conserved proteinchromosome CDS806619 621 + 0.357488
OB0780 sugar kinasechromosome CDS836251 906 + 0.380795
OB0785 transcriptional regulatorchromosome CDS841100 417 - 0.318945
OB0812 transcriptional regulatorchromosome CDS865361 732 + 0.31694
OB0831 two-component response regulatorchromosome CDS882654 684 + 0.331871
OB0835 transcriptional regulatorchromosome CDS887207 624 - 0.344551
OB0846 hypothetical proteinchromosome CDS899103 912 - 0.33114
OB0885 transcriptional regulator (GntR family)chromosome CDS938986 378 + 0.346561
OB0911 transcriptional regulator (AraC/XylS family) (divided with OB0911 and OB0912)chromosome CDS965594 312 + 0.429487
OB0940 phage shock protein A (membrane protein)chromosome CDS986905 672 + 0.376488
OB0944 hypothetical conserved proteinchromosome CDS990428 786 + 0.306616
OB0948 hypothetical conserved proteinchromosome CDS994876 348 + 0.327586
OB0950 transcriptional regulatorchromosome CDS996548 303 + 0.339934
OB0962 transcriptional regulator (ArsR family)chromosome CDS1014693 318 + 0.333333
OB0967 transcriptional regulator (GntR family)chromosome CDS1018324 717 + 0.304045
OB0993 transcriptional regulator (TetR/AcrR family)chromosome CDS1037881 561 + 0.286988
OB0995 transcriptional regulatorchromosome CDS1039739 576 + 0.355903
OB1003 hypothetical proteinchromosome CDS1046655 570 - 0.349123
OB1010 transcriptional regulator (sigma-L-dependent)chromosome CDS1052689 1755 + 0.328205
OB1019 cold shock proteinchromosome CDS1061841 201 - 0.402985
OB1024 inner spore coat protein Dchromosome CDS1065505 420 + 0.402381
OB1028 hypothetical conserved proteinchromosome CDS1067731 486 + 0.325103
OB1031 hypothetical proteinchromosome CDS1072061 477 + 0.33543
OB1069 two-component response regulatorchromosome CDS1111625 648 + 0.359568
OB1102 RNA polymerase sigma factorchromosome CDS1156745 729 + 0.323731
OB1121 repressor proteinchromosome CDS1173205 201 + 0.338308
OB1162 two-component response regulatorchromosome CDS1212006 630 + 0.339683
OB1198 transcriptional regulator (MarR family)chromosome CDS1249205 420 - 0.307143
OB1202 hypothetical proteinchromosome CDS1251395 612 + 0.308824
OB1210 hypothetical conserved proteinchromosome CDS1259737 594 + 0.329966
OB1225 hypothetical proteinchromosome CDS1275039 462 + 0.305195
OB1229 hypothetical conserved proteinchromosome CDS1277492 426 - 0.35446
OB1243 hypothetical proteinchromosome CDS1291772 291 + 0.350515
OB1246 transcriptional regulator (MarR family)chromosome CDS1294166 453 + 0.333333
OB1248 RNA polymerase ECF-type sigma factorchromosome CDS1295511 492 + 0.292683
OB1269 RNA polymerase ECF-type sigma factorchromosome CDS1313327 525 + 0.304762
OB1270 hypothetical conserved proteinchromosome CDS1313844 843 + 0.321471
OB1271 hypothetical conserved proteinchromosome CDS1314995 537 + 0.357542
OB1285 hypothetical conserved proteinchromosome CDS1327688 609 - 0.333333
OB1298 RNA polymerase ECF-type sigma factorchromosome CDS1339487 528 - 0.346591
OB1344 hypothetical conserved proteinchromosome CDS1387690 570 + 0.380702
OB1348 transcriptional regulatorchromosome CDS1391040 1359 - 0.359823
OB1400 transcriptional regulator (ArsR family)chromosome CDS1442199 312 - 0.307692
OB1458 hypothetical conserved proteinchromosome CDS1495561 483 - 0.312629
OB1497 transcriptional regulator (LysR family)chromosome CDS1538335 858 + 0.368298
OB1499 fibronectin:fibrinogen-binding proteinchromosome CDS1540065 1710 - 0.338012
OB1503 DNA-directed RNA polymerase omega subunitchromosome CDS1545772 195 + 0.323077
OB1526 ribonuclease IIIchromosome CDS1569826 687 + 0.388646
OB1547 hypothetical conserved proteinchromosome CDS1591145 321 + 0.292835
OB1551 transcriptional pleiotropic repressorchromosome CDS1594664 780 + 0.360256
OB1596 hypothetical conserved proteinchromosome CDS1635497 288 + 0.357639
OB1615 transcriptional regulator (GntR family)chromosome CDS1654611 726 + 0.360882
OB1620 hypothetical conserved proteinchromosome CDS1659505 786 + 0.335878
OB1641 two-component response regulatorchromosome CDS1681173 741 - 0.323887
OB1723 diamine N-acetyltransferase (spermine:spermidine acetyltransferase)chromosome CDS1769163 459 + 0.344227
OB1727 hypothetical proteinchromosome CDS1770931 327 + 0.330275
OB1812 hypothetical proteinchromosome CDS1848859 297 - 0.319865
OB1819 two-component response regulatorchromosome CDS1855402 717 - 0.354254
OB1827 hypothetical conserved proteinchromosome CDS1863033 579 - 0.355786
OB1830 reductase (riboflavin biosynthesis)chromosome CDS1864706 357 - 0.296919
OB1870 transcriptional regulator (sigma-L-dependent)chromosome CDS1901899 2052 - 0.352339
OB1900 transcriptional regulatorchromosome CDS1930780 444 - 0.308559
OB1905 helicase (Snf2/Rad54 family)chromosome CDS1936464 1671 + 0.328546
OB1919 glucose kinasechromosome CDS1946831 978 - 0.371166
OB1939 ATP-dependent RNA helicasechromosome CDS1965604 1299 - 0.327175
OB2016 hypothetical conserved proteinchromosome CDS2041052 420 - 0.35
OB2109 transcriptional regulator (MarR family)chromosome CDS2143591 453 - 0.315673
OB2110 transcriptional regulatorchromosome CDS2144291 225 + 0.382222
OB2121 transcriptional regulator (TetR/AcrR family)chromosome CDS2154445 588 - 0.329932
OB2158 hypothetical conserved proteinchromosome CDS2191013 474 - 0.35443
OB2165 two-component response regulator involved in phosphate regulationchromosome CDS2199003 696 - 0.326149
OB2175 transcriptional regulator (GntR family)chromosome CDS2210567 606 - 0.320132
OB2183 hypothetical conserved proteinchromosome CDS2218833 1308 - 0.35474
OB2201 hypothetical conserved proteinchromosome CDS2235607 645 - 0.325581
OB2212 transcriptional regulator (IclR family)chromosome CDS2246811 747 + 0.350736
OB2270 transcriptional regulator (LysR family)chromosome CDS2313398 870 + 0.34023
OB2272 transcriptional regulator (GntR family)chromosome CDS2315149 729 - 0.33882
OB2289 helicase (swi/snf family)chromosome CDS2331223 3156 - 0.33967
OB2313 RNA polymerase ECF-type sigma factorchromosome CDS2363191 468 - 0.299145
OB2337 hypothetical proteinchromosome CDS2392399 2127 - 0.298072
OB2361 hypothetical conserved proteinchromosome CDS2412437 624 - 0.310897
OB2425 transcriptional regulator (ArsR family)chromosome CDS2478329 348 - 0.313218
OB2428 ribonulease Rchromosome CDS2481156 2235 - 0.37047
OB2441 RNA polymerase sigma-54 factorchromosome CDS2496390 1293 - 0.336427
OB2464 transcriptional regulator (TetR/AcrR family)chromosome CDS2521252 576 - 0.324653
OB2477 transcriptional antiterminator of glycerol uptake operonchromosome CDS2534849 543 - 0.3407
OB2484 hypothetical conserved proteinchromosome CDS2540010 192 - 0.307292
OB2509 negative regulator of flagellin synthesis (anti-sigma factor)chromosome CDS2565775 258 - 0.325581
OB2515 transcriptional regulatorchromosome CDS2571738 678 - 0.349558
OB2530 attenuator for lytABC and lytR expressionchromosome CDS2584623 963 + 0.369678
OB2546 hypothetical conserved proteinchromosome CDS2602309 621 + 0.36715
OB2548 hypothetical proteinchromosome CDS2603099 267 + 0.307116
OB2557 transcriptional regulator involved in carbon catabolite controlchromosome CDS2613129 1017 - 0.334317
OB2567 transcriptional regulator involved in carbon catabolite controlchromosome CDS2625185 1023 - 0.322581
OB2602 transcriptional antiterminator (BglG family)chromosome CDS2661823 2091 - 0.335246
OB2606 transcriptional regulator (GntR family)chromosome CDS2667589 669 - 0.337818
OB2610 hypothetical conserved proteinchromosome CDS2672073 510 - 0.368627
OB2629 transcriptional regulatorchromosome CDS2696035 1401 - 0.33833
OB2660 RNA polymerase ECF-type sigma factorchromosome CDS2728296 564 + 0.324468
OB2674 transcriptional regulator (TetR/AcrR family)chromosome CDS2744672 588 - 0.309524
OB2688 transcriptional regulator (GntR family)chromosome CDS2757994 1395 + 0.351971
OB2705 transcriptional regulatorchromosome CDS2774568 1002 - 0.362275
OB2710 hypothetical proteinchromosome CDS2780213 831 - 0.340554
OB2720 transcriptional antiterminator of glycerol uptake operonchromosome CDS2789957 567 + 0.358025
OB2757 polyketide synthasechromosome CDS2828869 855 - 0.396491
OB2770 transcriptional regulator (TetR/AcrR family)chromosome CDS2843642 897 + 0.318841
OB2773 hypothetical proteinchromosome CDS2846577 567 - 0.375661
OB2784 hypothetical conserved proteinchromosome CDS2861784 1134 + 0.349206
OB2800 transcriptional repressor of the arabinose operonchromosome CDS2880586 1092 + 0.336081
OB2805 hypothetical conserved proteinchromosome CDS2886069 378 + 0.349206
OB2808 transcriptional repressor of phosphotransferase systemchromosome CDS2888403 780 + 0.341026
OB2820 transcriptional regulator (IclR family)chromosome CDS2899683 774 + 0.326873
OB2822 two-component response regulatorchromosome CDS2901963 633 - 0.377567
OB2825 hypothetical conserved proteinchromosome CDS2904476 639 - 0.374022
OB2830 hypothetical conserved proteinchromosome CDS2909745 1143 + 0.331584
OB2842 transcriptional regulator (GntR family)chromosome CDS2925785 705 - 0.356028
OB2847 transcriptional regulator (GntR family)chromosome CDS2930984 660 - 0.362121
OB2850 two-component response regulatorchromosome CDS2934310 600 - 0.425
OB2854 hypothetical conserved proteinchromosome CDS2938652 540 + 0.314815
OB2873 transcriptional regulator (LysR family)chromosome CDS2958496 891 + 0.364759
OB2880 transcriptional regulator (GntR family)chromosome CDS2966145 642 - 0.38162
OB2897 nitrate:nitrite response transcriptional regulatorchromosome CDS2985808 696 - 0.323276
OB2898 transcriptional regulatorchromosome CDS2986592 666 - 0.301802
OB2909 transcriptional regulatorchromosome CDS2997633 1065 + 0.370892
OB3009 transcriptional regulator (TetR/AcrR family)chromosome CDS3118270 609 - 0.339901
OB3043 hypothetical conserved proteinchromosome CDS3156772 327 + 0.376147
OB3075 helicase (swi/snf family)chromosome CDS3193681 3171 - 0.348155
OB3092 RNA polymerase ECF-type sigma factorchromosome CDS3216336 540 - 0.35
OB3096 hypothetical conserved proteinchromosome CDS3220586 474 - 0.339662
OB3114 ATP-dependent helicasechromosome CDS3243213 1905 - 0.361155
OB3124 transcriptional repressor of the xylose operonchromosome CDS3256210 1203 + 0.339983
OB3139 transcriptional regulatorchromosome CDS3272361 201 + 0.333333
OB3153 transcriptional regulator (TetR/AcrR family)chromosome CDS3283697 630 - 0.366667
OB3159 transcriptional regulator (Sir2 family)chromosome CDS3290867 711 + 0.405063
OB3169 hypothetical proteinchromosome CDS3300876 582 + 0.329897
OB3181 transcriptional regulator (LysR family)chromosome CDS3311808 864 - 0.364583
OB3184 transcriptional regulator (tetR-family)chromosome CDS3314352 600 + 0.301667
OB3186 hypothetical conserved proteinchromosome CDS3315486 594 + 0.348485
OB3201 transcriptional regulator (GntR family)chromosome CDS3331840 708 - 0.362994
OB3219 two-component response regulator (partial)chromosome CDS3351849 714 - 0.380952
OB3221 hypothetical proteinchromosome CDS3354694 804 - 0.39801
OB3228 hypothetical conserved proteinchromosome CDS3364313 564 + 0.347518
OB3233 transcriptional regulator (IclR family)chromosome CDS3368996 768 - 0.338542
OB3241 transcriptional regulator (LacI-family)chromosome CDS3379139 1032 + 0.377907
OB3243 hypothetical proteinchromosome CDS3381306 336 + 0.3125
OB3250 two-component response regulatorchromosome CDS3387612 669 - 0.370703
OB3259 transcriptional regulator (GntR family)chromosome CDS3395310 621 - 0.330113
OB3271 transcriptional regulator (Lrp/AsnC family)chromosome CDS3408212 450 + 0.364444
OB3277 hypothetical conserved proteinchromosome CDS3413755 309 - 0.36246
OB3311 hypothetical proteinchromosome CDS3450041 600 + 0.345
OB3318 transcriptional regulator (MerR family)chromosome CDS3458114 774 + 0.382429
OB3330 hypothetical proteinchromosome CDS3467993 270 + 0.255556
OB3331 hypothetical conserved proteinchromosome CDS3468763 462 + 0.341991
OB3350 transcriptional regulatorchromosome CDS3486474 354 - 0.361582
OB3352 transcriptional regulator (tetR-family)chromosome CDS3487789 576 + 0.317708
OB3356 RNA polymerase ECF-type sigma factorchromosome CDS3491447 588 + 0.420068
OB3380 transcriptional regulator (TetR-family)chromosome CDS3517367 516 + 0.350775
OB3397 hypothetical conserved proteinchromosome CDS3532233 807 + 0.361834
OB3407 transcriptional regulator (LysR family)chromosome CDS3543301 876 + 0.388128
OB3410 transcriptional regulatorchromosome CDS3547926 960 - 0.36875
OB3425 transcriptional repressor of the xylose operonchromosome CDS3562940 1209 - 0.317618
OB3452 two-component response regulatorchromosome CDS3589404 702 - 0.390313
OB3458 transcriptional regulatorchromosome CDS3596148 435 - 0.365517
OB3476 transcriptional repressor (LacI family)chromosome CDS3611980 984 - 0.35874
OB3488 hypothetical conserved proteinchromosome CDS3621893 861 - 0.341463
ahrC arginine repressor (arginine metabolism regulator)chromosome CDS1910335 450 - 0.326667
ccpA transcriptional regulator involved in carbon catabolite controlchromosome CDS2264345 999 - 0.351351
cggR transcriptional repressor of gapA operon (central glycolytic genes regulator)chromosome CDS2494597 1020 - 0.380392
comK competence transcription factor (CTF)chromosome CDS1228038 510 + 0.376471
cspB cold shock proteinchromosome CDS1783258 201 + 0.348259
degU two-component response regulator involved in degradative enzymechromosome CDS2575855 693 - 0.349206
dinG ATP-dependent DNA helicasechromosome CDS1801021 2820 - 0.339362
fruR transcriptional repressor of fructose operonchromosome CDS891932 747 - 0.342704
glcT transcriptional antiterminatorchromosome CDS1917658 843 - 0.285884
glnR glutamine synthetase transcription repressorchromosome CDS1692228 399 + 0.363409
gntR transcriptional repressor of gluconate operonchromosome CDS3320698 723 - 0.35823
greA transcriptional elongation factorchromosome CDS2026527 477 - 0.356394
hrcA transcriptional repressor of class I heat-shock geneschromosome CDS1997900 1029 - 0.353741
lexA transcriptional repressor of SOS regulonchromosome CDS1710717 624 - 0.362179
nusA transcriptional termination-antitermination factorchromosome CDS1634394 1095 + 0.376256
nusB transcriptional terminatorchromosome CDS1914942 381 - 0.333333
paiA transcriptional repressor of sporulation, septation and degradationchromosome CDS1294644 519 + 0.344894
rbsR transcriptional repressor of ribose operonchromosome CDS2635331 984 - 0.372967
recG ATP-dependent DNA helicasechromosome CDS1563631 2031 + 0.36583
relA GTP pyrophosphokinase (stringent response)chromosome CDS2049547 2205 - 0.348299
rho transcriptional termination factor rhochromosome CDS3109026 1281 - 0.372365
rpoA DNA-directed RNA polymerase alpha subunitchromosome CDS154474 945 + 0.385185
rpoB DNA-directed RNA polymerase beta subunitchromosome CDS128940 3540 + 0.413277
rpoC DNA-directed RNA polymerase beta' subunitchromosome CDS132590 3612 + 0.401717
rpoE DNA-directed RNA polymerase delta chainchromosome CDS3117330 522 - 0.354406
sigA RNA polymerase sigma-43(-A) factorchromosome CDS1969918 1143 - 0.391076
sigD RNA polymerase sigma-D factorchromosome CDS1619437 777 + 0.328185
sigE stage II sporulation protein GB (RNA polymerase sporulation-specific sigma E factor)chromosome CDS1516288 720 + 0.325
sigF stage II sporulation protein AC (RNA polymerase sigma-F factor)chromosome CDS1871926 753 - 0.358566
sigG stage III sporulation protein G (RNA polymerase sporulation-specific sigma G factor)chromosome CDS1517130 783 + 0.34355
sigH RNA polymerase sigma-H factor (sigma-30)chromosome CDS122942 654 + 0.362385
sigK RNA polymerase sigma 28 (sigam K) factorchromosome CDS2024046 705 + 0.344681
sinR transcriptional regulator of post-exponential-phase responses (PbsX(xre)family)chromosome CDS2579687 327 - 0.302752
spo0J stage 0 sporulation protein J (Soj antagonist : chromosome positioning and transport protein)chromosome CDS3620158 825 - 0.356364