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2024-05-25 06:49:06

Gene list

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COG category: Transcription
Organism: Synechocystis sp. PCC 6803, PCC6803

Number of genes found: 120

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Synechocystis sp. PCC 6803, PCC6803
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
arsA arsenical resistance operon repressorSubName: Full=Arsenical resistance operon repressor; chromosome CDS1412237 315 - 0.485714
cmpR CmpRRecName: Full=HTH-type transcriptional activator CmpR; chromosome CDS3167887 915 - 0.428415
deaD ATP-dependent RNA helicase; DeaDSubName: Full=ATP-dependent RNA helicase DeaD; chromosome CDS2887644 1479 + 0.530088
hrcA CIRCE binding repressorRecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS258227 1137 - 0.483729
hypB hydrogenase expression/formation protein; HypBSubName: Full=Hydrogenase expression/formation protein HypB; chromosome CDS798846 690 - 0.447826
hypB hydrogenase isoenzymes formation protein; HypBRecName: Full=Probable hydrogenase nickel incorporation protein HypB; chromosome CDS1907764 858 - 0.504662
im30 chloroplast membrane-associated 30 kD proteinSubName: Full=Chloroplast membrane-associated 30 kD protein; chromosome CDS3529323 672 + 0.514881
im30 chloroplast membrane-associated 30 kD proteinRecName: Full=Uncharacterized protein sll0617; chromosome CDS2645271 804 - 0.533582
lexA SOS function regulatory proteinSubName: Full=SOS function regulatory protein; chromosome CDS1318719 612 - 0.493464
lytR membrane bound protein; LytRSubName: Full=Membrane bound protein LytR; chromosome CDS1807333 1392 - 0.511494
merR mercuric resistance operon regulatory protein; precorrin isomeraseSubName: Full=Mercuric resistance operon regulatory protein precorrin isomerase; chromosome CDS3057217 1113 - 0.508536
merR mercuric resistance operon regulatory proteinRecName: Full=Uncharacterized HTH-type transcriptional regulator slr0701; chromosome CDS3091244 414 + 0.427536
mfd transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS2701931 3600 - 0.471944
ntcB transcriptional activator protein; NtcBRecName: Full=Probable nitrogen assimilation transcriptional activator; chromosome CDS2140664 930 + 0.455914
nusA N utilization substance proteinSubName: Full=N utilization substance protein; chromosome CDS132483 1377 + 0.535222
nusB N utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS2104943 828 - 0.532609
nusG transcription antitermination protein; NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS925416 618 - 0.506472
pchR regulatory protein; PchRSubName: Full=Regulatory protein PchR; chromosome CDS20615 981 - 0.494393
pchR regulatory protein; PchRSubName: Full=Regulatory protein PchR; chromosome CDS38644 993 + 0.431017
pcrR regulatory protein; PcrRSubName: Full=Regulatory protein PcrR; chromosome CDS27990 1041 - 0.336215
pknA protein kinase; PknARecName: Full=Serine/threonine-protein kinase F; EC=2.7.11.1; chromosome CDS1027844 1488 + 0.492608
pknA eukariotic protein kinaseRecName: Full=Serine/threonine-protein kinase B; EC=2.7.11.1; chromosome CDS1991550 1725 + 0.506087
pknA protein kinaseRecName: Full=Serine/threonine-protein kinase-like protein E; chromosome CDS1078657 1845 + 0.509485
pknA eukaryotic protein kinaseRecName: Full=Serine/threonine-protein kinase D; EC=2.7.11.1; chromosome CDS3082151 1518 - 0.395916
psr regulation of penicillin binding protein 5 productionSubName: Full=Regulation of penicillin binding protein 5 production; chromosome CDS1144728 1446 + 0.528354
rbcR rubisco operon transcriptional regulatorSubName: Full=Rubisco operon transcriptional regulator; chromosome CDS1487445 951 - 0.465825
recG DNA recombinaseRecName: Full=ATP-dependent DNA helicase RecG; EC=3.6.4.12; chromosome CDS2497726 2496 + 0.448317
rnb ribonuclease IIRecName: Full=Uncharacterized ribonuclease sll1290; EC=3.1.-.-; chromosome CDS693211 2001 - 0.521739
rnc ribonuclease IIIRecName: Full=Ribonuclease 3 1; EC=3.1.26.3; AltName: Full=Ribonuclease III 1; Short=RNase III 1; chromosome CDS2071379 696 + 0.505747
rnc ribonuclease IIIRecName: Full=Ribonuclease 3 2; EC=3.1.26.3; AltName: Full=Ribonuclease III 2; Short=RNase III 2; chromosome CDS2431704 735 + 0.488435
rpoA RNA polymerase alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS829141 945 - 0.506878
rpoB RNA polymerase beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS857558 3309 - 0.529465
rpoC1 RNA polymerase gamma-subunitRecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; EC=2.7.7.6; AltName: Full=RNA polymerase subunit gamma; AltName: Full=Transcriptase subunit gamma; chromosome CDS1854102 1881 + 0.519405
rpoC2 RNA polymerase beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS853497 3954 - 0.541477
rpoD RNA polymerase sigma factorRecName: Full=Probable RNA polymerase sigma-C factor; chromosome CDS2731560 1215 - 0.511934
rpoD RNA polymerase sigma factorSubName: Full=RNA polymerase sigma factor; chromosome CDS1254783 957 - 0.512017
rpoD RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor; chromosome CDS2269126 1038 - 0.521195
rpoD RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor; chromosome CDS1301671 1110 - 0.516216
rpoDI RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS3323275 1278 + 0.49374
rpoE RNA polymerase sigma-E factorSubName: Full=RNA polymerase sigma-E factor; chromosome CDS983804 672 + 0.511905
rpoE RNA polymerase sigma-E factorSubName: Full=RNA polymerase sigma-E factor; chromosome CDS1342052 561 - 0.497326
rpoF RNA polymerase sigma-37SubName: Full=RNA polymerase sigma-37; chromosome CDS3371247 777 + 0.496783
sll0088 SubName: Full=Sll0088 protein; chromosome CDS2870696 723 - 0.502075
sll0286 RecName: Full=Uncharacterized N-acetyltransferase ycf52-like; EC=2.3.1.-; chromosome CDS3021893 516 - 0.513566
sll0310 SubName: Full=Sll0310 protein; chromosome CDS2459374 909 - 0.526953
sll0396 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS2682552 675 - 0.515556
sll0649 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS422772 738 - 0.476965
sll0687 SubName: Full=Sll0687 protein; chromosome CDS2634660 558 - 0.501792
sll0786 SubName: Full=Sll0786 protein; chromosome CDS3068630 579 - 0.44905
sll0789 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS3064912 699 - 0.486409
sll0797 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS3050263 705 - 0.459574
sll0832 SubName: Full=Sll0832 protein; chromosome CDS2838924 456 - 0.484649
sll0921 NarL subfamilySubName: Full=NarL subfamily; chromosome CDS1993377 669 - 0.515695
sll0998 LysR transcriptional regulatorRecName: Full=Probable RuBisCO transcriptional regulator; chromosome CDS630555 1038 - 0.514451
sll1286 SubName: Full=Sll1286 protein; chromosome CDS705307 711 - 0.479606
sll1330 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS3294498 753 - 0.511288
sll1365 SubName: Full=Sll1365 protein; chromosome CDS3309530 1902 - 0.489485
sll1366 helicase of the snf2/rad54 familySubName: Full=Helicase of the snf2/rad54 family; chromosome CDS3305654 3120 - 0.523397
sll1392 SubName: Full=Sll1392 protein; chromosome CDS59039 612 - 0.514706
sll1469 SubName: Full=Sll1469 protein; chromosome CDS971460 858 - 0.484848
sll1512 RecName: Full=Uncharacterized HTH-type transcriptional regulator sll1512; chromosome CDS462147 408 - 0.487745
sll1544 response regulator like proteinSubName: Full=Response regulator like protein; chromosome CDS3473513 687 - 0.487627
sll1552 SubName: Full=Sll1552 protein; chromosome CDS3448208 903 - 0.427464
sll1574 RecName: Full=Serine/threonine-protein kinase A; EC=2.7.11.1; chromosome CDS731363 312 - 0.525641
sll1575 serine/threonine protein kinaseRecName: Full=Serine/threonine-protein kinase A; EC=2.7.11.1; chromosome CDS730108 1251 - 0.497202
sll1592 NarL subfamilySubName: Full=NarL subfamily; chromosome CDS1490683 681 - 0.506608
sll1624 regulatory components of sensory transduction systemSubName: Full=Regulatory components of sensory transduction system; chromosome CDS1320835 1005 - 0.486567
sll1660 SubName: Full=Sll1660 protein; chromosome CDS273802 585 - 0.502564
sll1671 SubName: Full=Sll1671 protein; chromosome CDS255823 483 - 0.490683
sll1708 NarL subfamilySubName: Full=NarL subfamily; chromosome CDS1277442 681 - 0.50514
sll1926 SubName: Full=Sll1926 protein; chromosome CDS744810 438 - 0.449772
sll1961 SubName: Full=Sll1961 protein; chromosome CDS1408483 1167 - 0.509854
slr0081 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS2885022 789 + 0.495564
slr0108 SubName: Full=Slr0108 protein; chromosome CDS2984985 1257 + 0.492442
slr0114 SubName: Full=Slr0114 protein; chromosome CDS2994185 1533 + 0.439008
slr0115 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS2995908 726 + 0.50551
slr0152 serine/threonine protein kinaseSubName: Full=Serine/threonine protein kinase; chromosome CDS2182063 1896 + 0.492616
slr0211 SubName: Full=Slr0211 protein; chromosome CDS2749230 1212 + 0.5
slr0240 SubName: Full=Slr0240 protein; chromosome CDS142559 423 + 0.539007
slr0312 NarL subfamilySubName: Full=NarL subfamily; chromosome CDS3034783 630 + 0.466667
slr0517 SubName: Full=Slr0517 protein; chromosome CDS2930768 615 + 0.469919
slr0599 eukaryotic protein kinaseRecName: Full=Serine/threonine-protein kinase C; EC=2.7.11.1; chromosome CDS3557481 1608 + 0.544154
slr0667 SubName: Full=Slr0667 protein; chromosome CDS3352682 522 + 0.331418
slr0680 SubName: Full=Slr0680 protein; chromosome CDS418704 423 + 0.458629
slr0729 RecName: Full=Thylakoid-associated protein slr0729; chromosome CDS114319 306 + 0.503268
slr0731 SubName: Full=Slr0731 protein; chromosome CDS115269 1209 + 0.529363
slr0780 RecName: Full=Transcriptional repressor NrdR; chromosome CDS2414833 486 + 0.479424
slr0812 RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS1697993 774 + 0.514212
slr0846 RecName: Full=Putative HTH-type transcriptional regulator slr0846; chromosome CDS2862558 474 + 0.495781
slr0868 SubName: Full=Slr0868 protein; chromosome CDS1366464 306 + 0.437909
slr0880 secreted protein MPB70 precursorSubName: Full=Secreted protein MPB70; chromosome CDS1138702 1773 + 0.485618
slr0895 SubName: Full=Slr0895 protein; chromosome CDS2763170 564 + 0.524823
slr0924 SubName: Full=Slr0924 protein; chromosome CDS2798613 861 + 0.480836
slr0947 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS2012781 705 + 0.546099
slr1245 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1383828 909 + 0.409241
slr1340 SubName: Full=Slr1340 protein; chromosome CDS1727770 537 + 0.379888
slr1495 SubName: Full=Slr1495 protein; chromosome CDS50246 1650 + 0.508485
slr1501 SubName: Full=Slr1501 protein; chromosome CDS59746 678 + 0.489676
slr1546 SubName: Full=Slr1546 protein; chromosome CDS984562 639 + 0.491393
slr1577 SubName: Full=Slr1577 protein; chromosome CDS3386005 489 + 0.519427
slr1584 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS3404545 705 + 0.482269
slr1623 RecName: Full=NAD(P)H-quinone oxidoreductase subunit M; EC=1.6.5.-; AltName: Full=NAD(P)H dehydrogenase I subunit M; Short=NDH-1 subunit M; Short=NDH-M; chromosome CDS2035067 366 + 0.442623
slr1783 NarL subfamilySubName: Full=NarL subfamily; chromosome CDS242246 849 + 0.504122
slr1837 OmpR subfamilySubName: Full=OmpR subfamily; chromosome CDS953752 705 + 0.516312
slr1871 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1216281 888 + 0.476351
slr1888 SubName: Full=Slr1888 protein; chromosome CDS1248284 1893 + 0.454834
slr1906 SubName: Full=Slr1906 protein; chromosome CDS609469 585 + 0.505983
slr1909 NarL subfamilySubName: Full=NarL subfamily; chromosome CDS613102 642 + 0.492212
slr2031 sigma factor SibG regulation protein; RsbUSubName: Full=Sigma factor SibG regulation protein RsbU; chromosome CDS781653 1359 + 0.490802
slr2100 regulatory components of sensory transduction systemSubName: Full=Regulatory components of sensory transduction system; chromosome CDS1568317 1107 + 0.476965
smtB transcriptional repressor; SmtBRecName: Full=Transcriptional repressor SmtB homolog; chromosome CDS3060807 399 - 0.483709
sohA HtaR suppressor proteinSubName: Full=HtaR suppressor protein; chromosome CDS110392 333 + 0.474474
spoT (p)ppGpp 3'-pyrophosphohydrolaseRecName: Full=Probable guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; AltName: Full=Penta-phosphate guanosine-3-pyrophosphohydrolase; Short=(ppGpp)ase; chromosome CDS1656043 2283 + 0.498467
ssl0564 response regulator like proteinSubName: Full=Response regulator like protein; chromosome CDS2286798 270 - 0.492593
ssl2009 RecName: Full=Thylakoid membrane protein ssl2009; chromosome CDS209527 300 - 0.466667
ssl2982 RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS2048144 231 - 0.467532
ssl3382 SubName: Full=Ssl3382 protein; chromosome CDS1223255 177 - 0.485876
ureG urease accessory protein GRecName: Full=Urease accessory protein UreG; chromosome CDS430424 621 - 0.484702
xylR xylose repressorSubName: Full=Xylose repressor; chromosome CDS2283794 984 + 0.538618
zam protein conferring resistance to acetazolamide; ZamRecName: Full=Acetazolamide conferring resistance protein zam; chromosome CDS777066 2346 - 0.505968