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# Chlamydophila pneumoniae AR39, AR39

>gid:24736  CP0043  serine/threonine-protein kinase
MDCRGGIPLPEPQVIGGYHVKKILSKKLRSRVVHGLHPETRHSTVIKVFS
PSPSFTSRSVYNFLKEAQSLHQITHPNIVKFHRYGKWQDCLYIAMEYIEG
ISLREYILAQFISLPQAIDIIFDIAQALEHLHSRNILHKDIKPENILITP
QGKIKLIDFGLADWDTEIQRAHPSVIGTPYYMSPEQRQGESHSPASDIYA
LGLLAYELILGHLSLGRVFLSLVPERISKILAKALQPSPNNRYSSTREFI
QDIHHYRMSGDMQEDLRIKDHTVALYEQLQTQRFWLAPETLRFPDFISGV
LYHQGYPLYPHAYDTLLEGDVFNLWLGYSPISNATIALSVVKSLVCQQDL
QRPLLDRVCEINECLIRMKIPIDEMGISILCLEISKENKELSWIACGKTV
FWIKRQGRVVQDFESFSPGLGKITSLQIRETKVAWEIGDEAVVCTLELEE
SVASLKTLSLAELQDRRQKAIFCPIESIHGGIQSRQHGSNSPSTLISLKR
IR
>gid:24759  CP0062  chromosome partioning protein, ParB family
MTEEISKDTIIEVAIDDIRVSPFQPRRVFSNEELQELIASIKAVGLIHPP
VVREICTGDRVLYYELIAGERRWRAMQLAGATTIPVILKHVIADGTAAEA
TLIENIQRVNLNPIEMAEAFKRLIHVFGLTQDKVAYKVGKKRSTVANYLR
LLALSKTIQESLLQGQITLGHAKVILTLEDPILREKLNEIIIQEHLAVRE
AELIAKQLISEEGSSIELKPTPLDMAESSKQHEELQQRLSDLCGYKVQIK
TRGSKATVSFHLQNTQDLQKLEAWLSSHGTLSESLS
>gid:24819  CP0121  DNA-directed RNA polymerase, alpha subunit
MPAKKKAQSVVLGKEKGMSDNAHNLLYDKFELPEAVKMLPVEGLPIDKHA
RFIAEPLERGMGHTLGNALRRALLIGLEAPAIISFAMTGVLHEYMAIEGV
IEDVTNIILNLKGALLKKYPMQDSSLGRTTQVLKASISIDASDLAAANGQ
KEVTLQDLLQEGDFEAVNPDQVIFTVTQPIQLEVVLRIAFGRGYTPSERI
VLEDKGVYEIVLDAAFSPVTLVNYFVEDTRVGQDTDFDRLVLIVETDGRV
TPKEALAFSTQILTKHFSIFENMDEKKIVFEEAISIEKENKDDILHKLIL
GINEIELSVRSTNCLSNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKN
KLKEMKLELGMDLTQFGVGLDNVKEKMKWYAEKIRAKNIKG
>gid:24837  CP0137  transcription termination factor Rho
MKEERSSEILPRVKETKKHAYVSMQEKSCVGECAVVASESEEAESVTVTK
IAKLQRMGIEELNILARQYGVKNIGSLTKSQVVFEIVKAKSERPDELLIG
EGVLEVLPDGFGFLRSPTYNYLPSAEDIYVSPAQIRRFDLKKGDTIIGTI
RSPKEKEKYFALLKVDKINGSTPDKAKERVLFENLTPLYPNQRIVMEMGK
DHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHAIAVNNPDIVL
IVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGNDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAA
RNIEGGGSLTILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRT
YPAIDLIKSGTRKEELLYHPSELERVYLFRQAIADLTTIDAMHLLLGRLK
KTNSNAEFLLSLKE
>gid:24876  CP0174  acetyltransferase, GNAT family
MTAEKQNTGILGLEIRYTLPSDATYMLKWLNDPKILRGFPIQTEAEIRET
VNFWVGFYRYHSSLTAVYNGNVAGVATLVLNPYVKVSHHALISIIVGEEF
RNKGIGTALLNNLIHLAKTRFKLEVLYLEVYEGNPALHLYQRFGFVEVGR
QNRFYKDEIGYLAKTTMEKDL
>gid:24923  CP0219  conserved hypothetical protein
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLKCSQRFTTFETVELTLQV
LKRDGRYENFQESKLIHGLNAASSHTRIGQDQVHAIASNVKSELLGKQNR
EISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDM
EK
>gid:24953  CP0249  exoribonuclease, VacB/Rnb family
MLKKPKRKPGRRTYGKSLKIFIPGTLFVHARKGFGFVSPDNPEEYPFDIF
VPARDLRGALDGDHVIVSVLPYPRDGQKLKGTISEVLARGKTTLVGTITS
LVSPTSALAYTSMSGSQSLIPVELLPGRTYKIGDRILLSTPPWVDKPQEG
ASPALQMLEFIGHITNAKADFQAIQAEYNLAEEFPPEVIEEASLFSQKHI
TQVLHSRKDLRDLLCFTIDSSTARDFDDAISLTYDHNNNYILGVHIADVS
HYVTPHSHLDKEAAKRCNSTYFPGKVIPMLPSALSDNLCSLKPNVDRLAV
SVFMTFTKSGHLSDYQIFRSVIRSKYRMTYDEVDNIIEKKHSHPLSKILN
EMATLSKKFSDIREERGCIRFVLPSVTMSLDNLQEPVALIENHQTFSHKL
IEEFMLKANEVVAYHISHQGVSLPFRSHEPPNDENLLAFQELAKNMGFDI
TFTPTQEPDYQYLLQTTSAGHPLEQVLHSQFVRSMKTASYSTENKGHYGL
KLDYYTHFTSPIRRYIDLIVHRLLFNPLSIDQTHLEIIVRACSTKERVSA
KAENSFENLKKTRFINKFLQEQPKTTYHAYIITANHEGLSFVVTEFCHEG
FIAAAELPKEYSLKKNALPESIPDKMKPGASIKVTIDSVNLLTQKIVWSI
ATTTEDKPKKIKKTPSKKKGTKKRAS
>gid:24957  CP0253  heat shock gene repressor HrcA
MTFSGSFPIMLSVTIVLVGLEMARSKVSKRDSKILDILFATTELYLKTGQ
PVGSKTLKESFCSDLSTATIRNYFAELEAEGFLKKNHTSGGRIPTDLALR
HYVDHQEECPEAEISAPIFDKISQLPSESRNIIKDLQKATELLGEILDLP
TFFSSPRFENDSVTNIQITQVDKQRAVTILSTEFGQIFTDTLWLPEACDT
LSIKRIEKFLQNYIRKLPTNEELSKKEEHLSMSLYNEVVVRYLTRYCNFS
EEDLYQTGMSKLLKYEAFKDPEVLALGLSLFENRRQMCELLNIGMHKGRA
TAFIGKELSDILGTSNPGCSVITIPYYMNRSPLGALGILGPINLPYKEAL
PLLKLFANKINETLTQSFYKFKLSFRRPLTSNCKLSNEPILRTEYSSIKL
LPSKETL
>gid:25099  CP0395  RNA polymerase sigma factor, sigma-70 family
MKTQQTQNIIEVWNFYWETQEIEYRDSLIEFYLPLVKSVVHRLISGMPSH
VKTEDLYASGVEGLVRAVERYNPERSRRFEGYAVFLIKAAIIDDLRKQDW
VPRSVHQKANKLSGAMDSLRQSLGKEPTDLELCEYLNISQQELSGWFVSA
RPALIVSLNEEWPSQSDEGAGMALEERIPDERAETGYDVVDKQEFSLCLA
NAIQELEEKERKVMALYYYEELVLKEIGKVLGVSESRVSQIHSKALLKLR
AALSAFR
>gid:25117  CP0413  ABC transporter, permease protein, putative
MLIMLSCVFSDTIFLSSFLAVTLICMTTALWGTILLISKQPLLSESLSHA
SYPGLLVGALMAQYVFSLQASIFWIVLFGCAASVFGYGIIVFLGKVCKLH
KDSALCFVLVVFFAIGVILASYVKESSPTLYNRINAYLYGQAATLGFLEA
TLAAIVFCASLFALWWWYRQIVVTTFDKDFAVTCGLKTVLYEALSLIFIS
LVIVSGVRSVGIVLISAMFVAPSLGARQLSDRLSTILILSAFFGGISGAL
GSYISVAFTCRAIIGQQAVPVTLPTGPLVVICAGLLAGLCLLFSPKSGWV
IRFVRRKHFSFSKDQEHLLKVFWHISHNRLENISVRDFVCSYKYQEYFGP
KPFPRWRVQILEWRGYVKKEQDYYRLTKKGRSEALRLVRAHRLWESYLVN
SLDFSKESVHELAEEIEHVLTEELDHTLTEILNDPCYDPHRQIIPNKKKE
V
>gid:25144  CP0441  N utilization substance protein A
MNKNLVAIFDYMEKEKGIQRSTIIGAIESALKIAAKKTLRDDANISVNIN
SRTGDIEVFCEKEIVEICQNPSKEIPLDKAREYDPDCQIGQYMDVPFVSD
NFGRIAAHAARQIIGQKLRHAERDVIYEEYRHRVNETLSGVVKRFAKGSN
LIIDLGKVEAILPTRFYPKTEKHKIGDKIYALLYEVQESENGGAEVILSR
SHAEFVKQLFIQEVPELEEGSVEIVKIAREAGYRTKLAVRSSDPKTDPVG
AFVGMRGSRVKNIIRELNDEKIDIVNYSPVSTELLQNLLYPIEIQKIAIL
EDDKVIAIVVNDADYATVIGKRGINARLISHILDYELEVQRMSEYNKLLE
IQRLQLAEFDSPHLDQPLEMEGISKLVIQNLEHAGYDTIRRVLLASANDL
ASVPGISLELAYKILEQVSKYGESKVDEKPEIED
>gid:25278  CP0574  arginine repressor
MKKKVTIDEALKEILRLEGAATQEELCAKLLAQGFATTQSSVSRWLRKIQ
AVKVAGERGARYSLPSSTEKTTTRHLVLSIRHNASLIVIRTVPGSASWIA
ALLDQGLKDEILGTLAGDDTIFVTPIDEGRLPLLMVSIANLLQVFLD
>gid:25338  CP0633  transcriptional regulator, putative
MKIPYARLEKGSLLVASPDINQGVFARSVILLCEHSLNGSFGLILNKTLG
FEISDDIFTFEKVSNHNIRFCMGGPLQANQMMLLHSCSEIPEQTLEICPS
VYLGGDLPFLQEIASSESGPEINLCFGYSGWQAGQLEKEFLSNDWFLAPG
NKDYVFYSEPEDLWALVLKDLGGKYASLSTVPDNLLLN
>gid:25375  CP0669  conserved hypothetical protein
MLLIYCKKKEIHLQWPQTAKIRFTPKIAMKVKINDQLICIPPFISARWSQ
IAFIESQEGENKDQGTLRLHLIDGKIISIPNLDQSIIDIAFQEHLLYLET
SQSGKEDSRDDDKLGVGVLMNVLQQITKGNDIQVLPKNLISPLFSGTNPI
EAILQHTPEHKDHPDAPTDVLEKMADVIRVLSGNNATLLPRPEPHCNCMH
CQIGRVMNEEDTLAVSDKDLTFRTWDIMQSGDKLYIVTNPLNPSDQFSVY
LGPPIGCTCGEPNCEHIKAVLYT
>gid:25385  CP0679  serine/threonine-protein kinase
MERYDIVRIIGKGGMGEVYLAYDPVCSRKVALKKIREDLAENPLLKRRFL
REARIAADLIHPGVVPVYTIYSEKDPVYYTMPYIEGYTLKTLLKSVWQKE
SLSKELAEKTSVGAFLSIFHKICCTIEYVHSRGILHRDLKPDNILLGLFS
EAVILDWGAAVACGEEEDLLDIDVSKEEVLSSRMTIPGRIVGTPDYMAPE
RLLGHPASKSTDIYALGVVLYQMLTLSFPYRRKKGKKIVLDGQRIPSPQE
VAPYREIPPFLSAVVMRMLAVDPQERYSSVTELKEDIESHLKGSPKWTLT
TALPPKKSSSWKLNEPILLSKYFPMLEVSPASWYSLAISNIESFSEMRLE
YTLSKKGLNEGFGILLPTSENALGGDFYQGYGFWLHIKERTLSVSLVKNS
LEIQRCSQDLESDKETFLIALEQHNHSLSLFVDGTTWLIHMNYLPSRSGR
VAIIVRDMEDILEDIGIFESSGSLRVSCLAVPDAFLAEKLYDRALVLYRR
IAESFPGRKEGYEARFRAGITVLEKASTDNNEQEFALAIEEFSKLHDGVA
APLEYLGKALVYQRLQEYNEEIKSLLLALKRYSQHPEIFRLKDHVVYRLH
ESFYKRDRLALVFMILVLEIAPQAITPGQEEKILVWLKDKSRATLFCLLD
PTVLELRSSKMELFLSYWSGFIPHLNSLFHRAWDQSDVRALIEIFYVACD
LHKWQFLSSCIDIFKESLEDQKATEEIVEFSFEDLGAFLFAIQSIFNKED
AEKIFVSNDQLSPILLVYIFDLFANRALLESQGEAIFQALDLIRSKVPEN
FYHDYLRNHEIRAHLWCRNEKALSTIFENYTEKQLKDEQHELFVLYGCYL
ALIQGAEAAKQHFDVCREDRIFPASLLARNYNRLGLPKDALSYQERRLLL
RQKFLYFHCLGNHDERDLCQTMYHLLTEEFQL
>gid:25399  CP0693  DNA-directed RNA polymerase, beta` subunit
MEKIMFGENSRDIGVLSKEGLFDKLEIGIASDITIRDKWSCGEIKKPETI
NYRTFKPEKGGLFCEKIFGPTKDWECCCGKYKKIKHKGIVCDRCGVEVTL
SKVRRERMAHIELAVPIVHIWFFKTTPSRIGNVLGMTASDLERVIYYEEY
VVIDPGKTDLTKKQLLNDAQYREVVEKWGKDAFVAKMGGEAIYDLLKSED
LQSLLKDLKERLRKTKSQQARMKLAKRLKIIEGFVSSSNHPEWMVLKNIP
VVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVR
NEKRMLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLL
GKRVDYSGRSVIIVGPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYT
IRSAKKMIQRGAPEVWDVLEEIIKGHPVLLNRAPTLHRLGIQAFEPVLIE
GKAIRIHPLVCAAFNADFDGDQMAVHVPLSVEAQLEAKVLMMAPDNIFLP
SSGKPVAIPSKDMTLGLYYLMADPTYFPEEHGGKTKIFKDEIEVLRALNN
GGFIDDVFGDRRDETGRGIHIHEKIKVRIDGQIIETTPGRVLFNRIVPKE
LGFQNYSMPSKRISELILQCYKKVGLEATVRFLDDLKDLGFIQATKAAIS
MGLKDVRIPDIKSHILKDAYDKVAIVKKQYDDGIITEGERHSKTISIWTE
VSEQLSDALYVEISKQTRSKHNPLFLMIDSGARGNKSQLKQLGALRGLMA
KPNGAIIESPITSNFREGLTVLEYSISSHGARKGLADTALKTADSGYLTR
RLVDVAQDVIITEKDCGTLNHIEISAIGQGSEELLPLKDRIYGRTVAEDV
YQPGDKSRLLAQSGDVLNSVQAEAIDDAGIETIKIRSTLTCESPRGVCAK
CYGLNLANGRLIGMGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTP
EIITNSDGILVYMDLRVVLGQEGHNLVLNKKGALHVVGDEGRTLNEYKKL
LSTKSIESLEVFPVELGVKILVADGTPVSQGQRIAEVELHNIPIICDKPG
FIKYEDLVEGISTEKVVNKNTGLVELIVKQHRGELHPQIAIYDDADLSEL
VGTYAIPSGAIISVEEGQRVDPGMLLARLPRGAIKTKDITGGLPRVAELV
EARKPEDAADIAKIDGVVDFKGIQKNKRILVVCDEMTGMEEEHLIPLTKH
LIVQRGDSVIKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQG
VDINDKHIEIIVRQMLQKVRITDPGDTTLLFGEDVNKKEFYEENRRTEED
GGKPAQAVPVLLGITKASLGTESFISAASFQDTTRVLTDAACCSKTDYLL
GFKENVIMGHMIPGGTGFETHKRIKQYLEKEQEDLVFDFVSETECVC
>gid:25400  CP0694  DNA-directed RNA polymerase, beta subunit
MSHQNSRRTRMLKCPERVSVKKKEDIPDLPNLIEIQIKSYKQFLQIGKLA
EERENIGLEEVFREIFPIKSYNEATVLEYLSYNLGVPKYSPEECIRRGIT
YSVTLKVRFRLTDETGIKEEEVYMGTIPLMTDKGTFIINGAERVVVSQVH
RSPGINFEQEKHSKGNILFSFRIIPYRGSWLEAIFDINDLIYIHIDRKKR
RRKILAITFIRALGYSSDADIIEEFFTIGESSLRSEKDFALLVGRILADN
IIDEASSLVYGKAGEKLSTAMLKRMLDAGIASVKIAVDADENHPIIKMLA
KDPTDSYEAALKDFYRRLRPGEPATLANARSTIMRLFFDPKRYNLGRVGR
YKLNRKLGFSIDDEALSQVTLRKEDVIGALKYLIRLKMGDEKACVDDIDH
LANRRVRSVGELIQNQCRSGLARMEKIVRERMNLFDFSSDTLTPGKVVSA
KGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGPGGLNRERAGF
EVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVR
DGIVTDEIEYMTADVEEECVIAQASASLDEYNMFTEPVCWVRYAGEAFEA
DTSTVTHMDVSPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKT
EAPVVGTGLECRAAKDSGAIVVAEEDGVVDFVDGYKVVVAAKHNPTIKRT
YHLKKFLRSNSGTCINQQPLCAVGDVITKGDVIADGPATDRGELALGKNV
LVAFMPWYGYNFEDAIIISEKLIREDAYTSIYIEEFELTARDTKLGKEEI
TRDIPNVSDEVLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEE
AVHLKDLQKGYKNQVATLKTEYREKLGALLLNEKAPAAIIHRRTAEIVVH
EGLLFDQETIERIEQEDLVDLLMPNCEMYEVLKGLLSDYETALQRLEINY
KTEVEHIREGDADLDHGVIRQVKVYVASKRKLQVGDKMAGRHGNKGVVSK
IVPEADMPYLSNGETVQMILNPLGVPSRMNLGQVLETHLGYAAKTAGIYV
KTPVFEGFPEQRIWDMMIEQGLPEDGKSFLYDGKTGERFDNKVVIGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYG
VAHMLQEILTVKSDDVSGRTRIYESIVKGENLLRSGTPESFNVLIKEMQG
LGLDVRPMVVDA
>gid:25405  CP0699  transcription antitermination protein NusG
MYKWYVVQVFTAQEKKVKKALEDFKESSGMTDFIQEIILPIENVMEVKKG
EHKVVEKYIWPGYLLVKMHLTDESWLYVKSTAGIVEFLGGGVPVALSEDE
VRSILTDIEEKKSGVVQKHQFEVGSRVKINDGVFVNFIGTVSEVFHDKGR
LSVMVSIFGRETRVDDLEFWQVEEVAPGQESE
>gid:25430  CP0721  ribonuclease III
MHPPIDITAIEAKLNFTFTQPKLLEIALTHPSYKNESAVQIEDSERLEFL
GDAVLGLIVTEHLFLLFPSMDEGTLSTARASLVNAKACCRYTTMLGIGDY
LLIGKGEKIQSERGRLSAYANLFESILGAVYLDGGLSPARKLTVPLLPPR
EEILPLMSGNPKNLLQQFTQKQFRVLPVYQSTAVTDAQGNVSYQIQVLVN
QEVWGEGNASSKKEAEKIAAQQALDTYGNKNQNTMDV
>gid:25574  CP0866  N utilization substance protein B, putative
MLVMATLSPEKFSGSPISISKEFPQQKMREIILQMLYALDMAPSAEDSLV
PLLMSQTAVSQKHVLVALNQTKSILEKSQELDLIIGNALKNKSFDSLDLV
EKNVLRLTLFEHFYSPPINKAILIAEAIRLVKKFSYSEACPFIQAILNDI
FTDSSLNENSLSI
>gid:25685  CP0975  transcription-repair coupling factor
MAMDFNPVNLDFSISKEFKEETLPLLLENIHPGATAFLAAKMFHDCRASV
IMITTPARLDDLFENLRTFLDQAPVEFPSSEIDLSPKLVNIDAVGKRDHL
LYSLNQHRAPIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTE
LCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIR
SYNPSDQLSTGKVSKISISPAYTEEASGGNYSHSLLDYFSTPPLYLFDNL
EILEDDFADISGTLSSLPDRFFSIGTLYDRISTSNQVYFSETPFPNVKNL
KENRVIIEAFHRNMEASRQAIPILYPEQIIQNDENPLLAFLQHLQEYMPP
HGKPLKLAIYSTKTKSLKEARALAETVARGDVEIYEKTGNLTSSFALVNE
AFAAISLSEFASTKVLRRQKQRTHFSVTTEEVFVPIPGETVVHIHNGIGK
FLGIEKKPNHLNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAAD
LHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVI
KFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRA
AVKAVCDGHRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAK
VQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKD
NLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFV
MEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGV
AHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADK
FGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNKQEYGG
GMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALKKHTS
PLLFNDDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQE
EMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCLSKS
EQTKKTLPYALSPTPELLVKEVIESIERGFLINAS
>gid:25732  CP1020  helicase, Snf2 family
MLNFRKLRRDFSANILQDGKKLFEQGAVIDAKILSMNGETVCISAQVRGL
YDNIYECEIEVDRSESDTVDSNCDCSYNYDCQHIVALLFYLEQYFNEMVV
AYARSADLETDHEINEEVKKELKETFVAAATKEEERKDREHQKEILREYV
HAANALSANPFFLPLEYLEKDSAELAVLFVSVNEDTFAPANQPIEFQLVL
RLPCRSKPFYISNIRTFLEGVLYQEPIVLNGRRFFFTMQSFNASDRKLID
LLIRYVRYPNHTTEEKLLKSAYLMPPALGVILAKMFEHQLADRGGGSLGE
KESFSGLFCGNLEEPLCWSLTPAKMKFNLDFFDMPYKALLMTPVILVDDD
EVQPEQTMLLESDAPGIIHHFVYHRFSPQIKRAHLRSFSRLRDIAIPEAL
FGSFRENALPVFQEYAEIANVHLLNSFVTLPYVDEVRAICDMSYLDGELE
AKLHFLYGSLRVPAASLALQYQDVRAFISDEGILARNLVEERKMLEEVFS
GFIYDERDGAFRVKSEKKIVEFMTETIPANQHRITFNCPENLSGQFIYDE
TIFELSFREGSDINYYEADLKVHGLLKGVPLDLLWDCISAKKRFLELPKA
GQQSKGTRRGKVNSGKLPCILVLDLEKIAPVVQIFNEIGFKVLDDLVQKC
PLWSLTGISLDQFEALPVNFSMSERLIEIQKQIRGEIEFDFQDVPQQIQA
TLRSYQTEGVHWLERLRKMHLNGILADDMGLGKTLQAIIAVTQSKLEKGS
GCSLIVCPTSLVYNWKEEFRKFNPEFRTLVIDGVPSQRRKQLTALADRDV
AITSYNLLQKDVELYKSFRFDYVVLDEAHHIKNRTTRNAKSVKMIQSDHR
LILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKADN
MVALKKKVSPFILRRMKEDVLKDLPPVSEILYHCHLTESQKELYQSYAAS
AKQELSRLVKQEGFERIHIHVLATLTRLKQICCHPAIFAKDAPEPGDSAK
YDMLMDLLSSLVDSGHKTVVFSQYTKMLGIIKKDLESRGIPFVYLDGSTK
NRLDLVNQFNEDPSLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVEN
QATDRVHRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVKKVINSDDE
VVSKLTWEEVLELLQI
>gid:25747  CP1034  helicase, Snf2/Rad54 family
MVLEALAIFRQDAMQHLLKHRKEIVVDFCEDSYTIRIPDEEAPEGYWLST
LKLQDIDRLTFASCSCPDGECCLHLMTAYFAVYDALGLHPLHDKFRHSFW
YAVFSHFFLDSIPLQAQGEMVYTLESPHITLTIECLSEEVFQDWLRTIHA
SEEPTVFTNKTFLKSALYRTAKKFFFLNEEGAELTIGENSQGFPSHFSLQ
WQGLVFKAEILDFPTLEDIFPKLELAHTSLENVSHDISITNVTVCAEEAK
VNFTLSPVIHKKDRENHPKTRIGSVEYVAKTHEMITGPKAIALPIYAIPL
LADKFKDQLLSLLCYDSLEYRLRYDIRLLRDASFSFSAYLVTPGDLDNGS
LIYPNYCYSPTKGLMQVVGMLSPKQAFIVKSEQVEDFLNERGHLIQEPGF
QTFINERPEGHLTYNVTEQGVLLFHYDVGDPSSTEIRFGTWTYYTNQGFF
LEKKNDLPIQDGLIVEPQDIPAFIVKNDAALRRLPNFFSSPPNLKDLLIE
VHRQSRGKGLDLKPILVGLGESRCWLFGVFLYREDIGFSLIPTPLQGLCF
LPRVIPPENVPQFLTQYAQHERILFPNPQTRPPESYELVIQSIHRPHPAS
PLHLQLELKTNLGSVPIGIALQGLKSKHTFLFTQAGFLDLKQNLFQFLKQ
FLSTQKCVIAENTVIANITDVFKLDALAPLSVTDDTIANPEDLQFFSQLK
AACLPPIPQNLFSSDHQLRPYQNSGLLWMWFLYNHRLSGLLCDEMGLGKT
HQATALLDIVFQSSQPSARPKFLIVCPTSVLPHWEHILSNHLPGVSIFSF
HGPNKPSELPPADILLTSYGTLRQNYDKFYKIAFTIVVFDEIHMAKNKSS
QIHKILCRIDAQMKLGLTGTPIENNLLEFKGLLDIILPNYLPSDALFKKL
FTKRCSSEELEEIIPSQDLLLKLTRPFILRRTKKLVLPELPDKVESIIAC
SLSPDQEKLYMATLQREKSHIQKLETPEEPATNFLHIFALLNHLKQICDH
PAVFFKDPDQYKNYESGKWNAFVKLLKESLNAGYKVVVFSQYIHMIRIIT
LYLEEIGIKYASIQGKSLNRKEEIETFTTDPNCQVFVGSLLAAGTGINLT
AGNVVIMYDRWWNPAKENQALDRVHRIGQKNTVFIYKLITEDTLEERIHY
LIEKKIRLLDKVIASQDSNILHMLNREDLLTILSYKDEHGTSDSEESPVD
APVEDDTGVLPPEDS
>gid:25792  CP1079  regulatory protein, putative
MIPFTKTIGFRLWLACAVAIIAPLGINIVWLNLDQYRTIVSAISTALKEN
AAFKANTLTQIVPLNVDVLSLFSDVLDLDAGIPETPNVLLSNEMQKVFQG
IYNEISLIKVFPNGDKIVVASSIPEHLGENYNHKIDIPKNTPFLAALKQS
PKNQEVFSVMQANVFDAKTQELQGILYTTFSAESLLKDLLINKQSYLTVK
TAILSKYGVILKASDPALHLHTVYPDMTKEKFCQVFLNDDPCPIDSELGP
LTLSPLDIGENFYSFKIKDTEIWGCIENVPSIDIAVLSYAKKEESFAPLW
RRARMYTAYFFCILLGSLIAFIVARRLSLPIRKLATAMIESRKNKNCLYT
DDSLGFEINRLGHIFNAMVENLHKQQHLAKTNFEMKENAQNALHLGEQAQ
QRLLPNTLPSYPHIELAKAYIPAITVGGDFFDVFVVGEGSKARLFLIVAD
ASGKGVNACGYSLFLKNMLRTFLSRSSSLQQAIQETSRLFYNNTKNSGMF
VTLCVYCYHQTSNTMEYYSCGHPPACYLDPDGETSWLFHPGMALGFLPEV
ANITSKLFHPKPGSLFVLYSDGITEAHNNNNDMFGEERLQAAIQGLTGKS
AADAVHRLMLSVKTFVGNSHQHDDITLLILKVLES
>gid:25815  CP1101  RNA polymerase sigma factor, sigma-54 family
MFQQKQKLSLKYLPSLRMQQGLQMLQSPLTELSSYVVQEIIDNPFFDLSS
LEEEEWSPCYRPTNSTFSYLNQTPGPQESLYTRLLPQIEEAFSTAEERFI
AHQIAGNLSDEGLFLRNPEDFAQELELPLEKIHKVWDTIQNLSPEGIASP
SLQSYWMKLLRNSSHQQAYSIVRDCYPLMTNCEFAPIMKKFSLSLSELRN
ILKKALGSIPWCPAAACTVKPMVSTPLPDIYLFYSSGSWKIEVSTRGLPS
IKLNKETFHFYEHLPKEEQKNLSQQILSAKWLIKNLRKREQTLLQVMETL
LPKQEDFLLGKIPAPYPLGIKDLAEDLSFHESTIFRAIENKAVAAPIGIF
PLKHLFPRGIHQDSSHSKENVLQWIRQWIATEQTPLSDSVISDRITAKGI
PCARRTVAKYRAQLKILPANKRKKLFYIRSSNSHFRDRQF
>gid:25830  CP1116  RNA polymerase sigma factor, sigma-70 family
MTKLSSKARNPLVLFQVRKLFMNTQNSQATEVSSEEESQKKLEELVALAK
EQGFITYEEINEILPMSFDTPEQIDQVLIFLTGMDIQVLNQIDVERQKEK
KKEAKELEGLARRTEGTPDDPVRMYLKEMGTVPLLTREEEVEISKRIEKA
QVQIERIILRFRYSAKEAISIAHYLISGKERFDKIISEKEVEDKTHFLKL
LPKLITLLKEEDTYLENLLLSLKQPDLSKQEAAKLNDSLEKCRIRTQAYL
RCFHCRHNVTEDFGEVVFKAYDSFLHLEQQINDLKVRAERNKFAAAKLAA
AKRKLYKREVAAGRTLEEFKKDVRMLQRWMDKSQEAKKEMVESNLRLVIS
IAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAV
TRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEPTPEELAEELGL
TPDRVREIYKIAQHPISLQAEVGEGSESSFGDFLEDTAVESPAEATGYSM
LKDKMKEVLKTLTDRERFVLIHRFGLLDGKPKTLEEVGSAFNVTRERIRQ
IEAKALRKMRHPIRSKQLRAFLDLLEEEKTGTSKVKSLKSK
>gid:25836  CP1122  transcriptional regulator
MIGDKIILFVTEDLSLSSQLKDLASQRSDYQILVSPVFPTSFESVAIFCE
YLLLPEQIFSPGIFPEEDLIVLFDTFQEEAITKVLNQGATGYLLRPITAK
VLDAVIRAFLRQHEVLEHSIPDTMTFGDHTFRVLNLVIESPEGSVYLTPS
EAGILKKLLINRGHLCLRKNLLAEIKGNTKEIIARNVDVHIASLRKKLGP
YGSKIVTIRGVGYLFSDDDSIPLQNHDNTAHPNEE