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2024-05-06 05:01:22

Gene list

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COG category: Transcription
Organism: Clostridium perfringens str. 13, 13

Number of genes found: 182

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Clostridium perfringens str. 13, 13
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
CPE0029 probable transcription regulatorchromosome CDS42348 570 + 0.257895
CPE0073 probable transcription antiterminatorchromosome CDS101425 585 + 0.263248
CPE0074 probable transcription antiterminatorchromosome CDS101897 378 + 0.275132
CPE0078 probable transcriptional regulatorchromosome CDS104966 519 - 0.233141
CPE0119 two-component response regulatorchromosome CDS159434 681 + 0.292217
CPE0126 hypothetical proteinchromosome CDS165999 327 + 0.204893
CPE0142 phage-related hypothetical proteinchromosome CDS182670 216 + 0.268519
CPE0143 phage-related hypothetical proteinchromosome CDS182876 360 + 0.236111
CPE0148 probable transcriptional regulatorchromosome CDS188513 690 + 0.247826
CPE0188 probable glucose kinasechromosome CDS240201 888 + 0.322072
CPE0189 conserved hypothetical proteinchromosome CDS241279 840 + 0.280952
CPE0197 conserved hypothetical proteinchromosome CDS253730 771 + 0.255512
CPE0198 hypothetical proteinchromosome CDS254724 501 + 0.245509
CPE0236 two-component response regulatorchromosome CDS308285 672 - 0.263393
CPE0256 probable transcriptional regulatorchromosome CDS327853 735 - 0.311565
CPE0258 probable transcriptional regulatorchromosome CDS329114 210 + 0.257143
CPE0259 probable transcriptional regulatorchromosome CDS329698 507 + 0.274162
CPE0281 probable transcriptional regulatorchromosome CDS361080 240 - 0.3125
CPE0284 probable transcriptional regulatorchromosome CDS363632 1023 - 0.304008
CPE0309 probable transcriptional regulatorchromosome CDS392981 687 + 0.298399
CPE0316 probable transcriptional regulatorchromosome CDS400516 780 - 0.283333
CPE0346 probable transcriptional regulatorchromosome CDS438898 750 + 0.266667
CPE0359 probable RNA polymerase ECF-type sigma factorchromosome CDS456308 537 - 0.234637
CPE0366 probable transcription regulatorchromosome CDS468439 1563 + 0.290467
CPE0370 probable transcriptional regulatorchromosome CDS477962 858 - 0.257576
CPE0377 probable transcriptional regulatorchromosome CDS487803 579 + 0.303972
CPE0386 probable transcriptional regulatorchromosome CDS499248 732 - 0.281421
CPE0417 probable transcriptional regulatorchromosome CDS532934 993 + 0.287009
CPE0434 hypothetical proteinchromosome CDS555174 489 + 0.302658
CPE0443 probable transcriptional regulatorchromosome CDS563577 372 + 0.330645
CPE0448 probable transcriptional regulatorchromosome CDS566776 858 - 0.250583
CPE0453 probable transcriptional regulatorchromosome CDS572798 786 - 0.236641
CPE0457 two-component response regulatorchromosome CDS577266 705 + 0.293617
CPE0507 hypothetical proteinchromosome CDS630408 648 + 0.299383
CPE0518 two-component response regulatorchromosome CDS644991 717 + 0.25523
CPE0525 probable transcriptional regulatorchromosome CDS651851 447 - 0.266219
CPE0532 two-component response regulatorchromosome CDS662600 669 + 0.289985
CPE0542 hypothetical proteinchromosome CDS670673 453 - 0.225166
CPE0596 hypothetical proteinchromosome CDS744879 267 + 0.292135
CPE0631 probable PBP5 synthesis regulator proteinchromosome CDS791586 1020 - 0.302941
CPE0642 two-component response regulatorchromosome CDS804031 696 + 0.277299
CPE0650 conserved hypothetical proteinchromosome CDS812504 1134 + 0.268959
CPE0657 conserved hypothetical proteinchromosome CDS819969 1338 + 0.28849
CPE0704 30S ribosomal protein homologchromosome CDS878020 333 + 0.279279
CPE0710 probable transcriptional regulatorchromosome CDS884390 483 + 0.325052
CPE0715 conserved hypothetical proteinchromosome CDS889388 516 + 0.263566
CPE0722 probable transcriptional regulatorchromosome CDS897523 663 + 0.27451
CPE0727 conserved hypothetical proteinchromosome CDS904693 807 + 0.289963
CPE0730 conserved hypothetical proteinchromosome CDS906584 465 + 0.251613
CPE0733 probable transcriptional regulatorchromosome CDS908623 897 - 0.249721
CPE0738 hypothetical proteinchromosome CDS915477 279 - 0.27957
CPE0740 conserved hypothetical proteinchromosome CDS916727 333 + 0.267267
CPE0745 probable transcriptional regulatorchromosome CDS922990 555 - 0.275676
CPE0750 hypothetical proteinchromosome CDS929956 411 + 0.22871
CPE0764 hypothetical proteinchromosome CDS944309 630 - 0.255556
CPE0765 probable transcriptional regulatorchromosome CDS945090 804 + 0.226368
CPE0770 probable transcriptional regulatorchromosome CDS951402 840 - 0.282143
CPE0787 probable transcriptional regulatorchromosome CDS971936 426 + 0.28169
CPE0789 probable transcriptional regulatorchromosome CDS973186 444 + 0.240991
CPE0814 conserved hypothetical proteinchromosome CDS998264 489 + 0.265849
CPE0837 probable transcriptional regulatorchromosome CDS1026369 285 + 0.25614
CPE0840 two-component response regulatorchromosome CDS1028688 669 + 0.282511
CPE0848 hypothetical proteinchromosome CDS1036701 738 + 0.220867
CPE0859 conserved hypothetical proteinchromosome CDS1052896 939 + 0.266241
CPE0869 hypothetical proteinchromosome CDS1069713 570 + 0.296491
CPE0871 hypothetical proteinchromosome CDS1071723 564 - 0.23227
CPE0876 hypothetical proteinchromosome CDS1076721 444 + 0.31982
CPE0939 probable acetyltransferasechromosome CDS1138271 513 + 0.290448
CPE0948 two-component response regulatorchromosome CDS1146821 690 + 0.271014
CPE0961 probable transcriptional regulatorchromosome CDS1157357 432 + 0.243056
CPE0980 probable transcriptional regulatorchromosome CDS1180337 819 - 0.225885
CPE1031 probable transcriptional regulatorchromosome CDS1232895 735 + 0.277551
CPE1067 probable transcriptional regulatorchromosome CDS1273892 465 + 0.277419
CPE1077 hypothetical proteinchromosome CDS1282443 390 - 0.297436
CPE1082 probable transcriptional regulatorchromosome CDS1285574 876 + 0.276256
CPE1090 hypothetical proteinchromosome CDS1292023 477 - 0.272537
CPE1097 probable transcriptional regulatorchromosome CDS1300313 213 - 0.2723
CPE1100 hypothetical proteinchromosome CDS1301594 693 + 0.238095
CPE1104 hypothetical proteinchromosome CDS1306795 432 + 0.310185
CPE1110 phage-related conserved hypothetical proteinchromosome CDS1310119 1098 + 0.277778
CPE1144 probable transcriptional regulatorchromosome CDS1338112 966 - 0.281574
CPE1176 conserved hypothetical proteinchromosome CDS1372966 423 - 0.252955
CPE1193 two-component response regulatorchromosome CDS1390419 678 - 0.280236
CPE1197 probable helicase proteinchromosome CDS1398012 2346 - 0.281756
CPE1280 hypothetical proteinchromosome CDS1504584 153 - 0.281046
CPE1283 probable transcriptional regulatorchromosome CDS1512322 750 + 0.292
CPE1305 probable transcriptional regulatorchromosome CDS1544797 1080 - 0.318519
CPE1340 probable transcriptional regulatorchromosome CDS1582126 1014 - 0.300789
CPE1369 probable acetyltransferasechromosome CDS1619964 504 - 0.277778
CPE1396 ATP-dependent RNA helicasechromosome CDS1647504 1587 + 0.31317
CPE1475 probable transcriptional regulatorchromosome CDS1731671 885 - 0.263277
CPE1516 probable RNA helicasechromosome CDS1773697 1224 - 0.280229
CPE1533 probable transcriptionalchromosome CDS1795396 981 - 0.277268
CPE1568 hypothetical proteinchromosome CDS1837145 405 - 0.271605
CPE1570 probable phage shock proteinchromosome CDS1838800 714 - 0.27591
CPE1625 SWI/SNF family helicasechromosome CDS1896218 3255 - 0.274962
CPE1626 probable transcriptional regulatorchromosome CDS1899839 987 - 0.284701
CPE1635 probable transcriptional regulatorchromosome CDS1907638 567 - 0.27866
CPE1654 probable transcriptional regulatorchromosome CDS1926770 471 + 0.286624
CPE1688 conserved hypothetical proteinchromosome CDS1964292 267 - 0.299625
CPE1701 transcriptional pleiotropic repressorchromosome CDS1979521 777 - 0.293436
CPE1717 conserved hypothetical proteinchromosome CDS1996363 1074 - 0.292365
CPE1759 hypothetical proteinchromosome CDS2038676 450 - 0.288889
CPE1786 conserved hypothetical proteinchromosome CDS2065437 387 - 0.273902
CPE1804 conserved hypothetical proteinchromosome CDS2083564 588 - 0.284014
CPE1847 probable fibronectin-binding proteinchromosome CDS2117443 1728 + 0.25463
CPE1914 probable PBP 5 synthesis repressorchromosome CDS2192466 1422 + 0.281997
CPE1925 two-component response regulatorchromosome CDS2205887 798 + 0.283208
CPE1956 probable valine-pyruvate transaminasechromosome CDS2244267 1407 - 0.265103
CPE1967 conserved hypothetical proteinchromosome CDS2256585 540 + 0.32963
CPE1990 probable serine/threonine protein kinasechromosome CDS2279929 597 - 0.259631
CPE2013 hypothetical proteinchromosome CDS2307094 627 - 0.307815
CPE2028 probable transcriptional regulatorchromosome CDS2319244 357 - 0.285714
CPE2077 probable transcriptional regulatorchromosome CDS2381846 894 - 0.315436
CPE2091 conserved hypothetical proteinchromosome CDS2399789 306 + 0.267974
CPE2102 probable ATP-dependent RNA helicasechromosome CDS2409786 1758 - 0.28157
CPE2109 hypothetical proteinchromosome CDS2419685 450 - 0.251111
CPE2123 probable membrane-bound proteinchromosome CDS2435436 1314 - 0.286149
CPE2168 conserved hypothetical proteinchromosome CDS2484325 2163 - 0.296348
CPE2217 conserved hypothetical proteinchromosome CDS2538939 888 - 0.28491
CPE2240 two-component response regulatorchromosome CDS2563369 468 - 0.286325
CPE2241 hypothetical proteinchromosome CDS2563901 153 - 0.287582
CPE2304 probable transcriptional regulatorchromosome CDS2650104 360 - 0.288889
CPE2307 hypothetical proteinchromosome CDS2652430 411 - 0.250608
CPE2332 two-component response regulatorchromosome CDS2685106 693 - 0.291486
CPE2358 probable sigma-L-dependent transcriptional regulatorchromosome CDS2717915 2007 + 0.285999
CPE2364 two-component response regulatorchromosome CDS2727062 699 - 0.280401
CPE2435 probable transcriptional regulatorchromosome CDS2783822 723 - 0.308437
CPE2468 conserved hypothetical proteinchromosome CDS2824139 780 - 0.303846
CPE2482 stage V sprulation protein Tchromosome CDS2840498 549 - 0.324226
CPE2488 two-component response regulatorchromosome CDS2849186 687 - 0.323144
CPE2494 probable transcriptional regulatorchromosome CDS2855996 909 + 0.276128
CPE2510 conserved hypothetical proteinchromosome CDS2875934 441 + 0.29932
CPE2546 probable transcriptional regulatorchromosome CDS2916487 666 - 0.286787
CPE2564 conserved hypothetical proteinchromosome CDS2937534 672 - 0.279762
CPE2627 probable transcriptional regulatorchromosome CDS3002476 726 - 0.290634
PCP19 conserved hypothetical proteinpCP13 CDS15135 315 - 0.244444
PCP60 hypothetical proteinpCP13 CDS51099 486 - 0.251029
PCP61 probable transcription regulator phage-relatedpCP13 CDS51897 1104 + 0.243659
argR probable arginine repressorchromosome CDS2095007 453 - 0.309051
argR arginine repressorchromosome CDS221496 456 + 0.287281
ccpA probable transcriptional regulatorchromosome CDS2907177 999 - 0.293293
cspL cold shock proteinchromosome CDS1450066 210 + 0.342857
ctsR transcriptional repressor of class III stress geneschromosome CDS2792281 456 - 0.29386
deaD probable ATP-dependent RNA helicasechromosome CDS1056913 1437 + 0.298539
fruR probable transcriptional regulatorchromosome CDS727822 747 - 0.286479
glcK probable glucose kinasechromosome CDS114586 948 + 0.355485
glpP probable glycerol uptake operon antiterminatorchromosome CDS2924327 561 - 0.279857
greA transcriptional elongation factorchromosome CDS2822397 477 - 0.318658
greA transcription elongation factorchromosome CDS1474429 465 + 0.32043
hrcA heat-inducible transcriptional repressorchromosome CDS2326329 1020 - 0.29902
iolR transcription repressor of myo-inositol catabolism operonchromosome CDS117931 771 - 0.267185
lexA LexA repressorchromosome CDS1359730 612 - 0.289216
malR probable transcriptional regulatorchromosome CDS2696149 1014 - 0.290927
mfd transcription-repair coupling factorchromosome CDS2842370 3489 - 0.29808
nusA probable transcriptional terminatorchromosome CDS1964586 1101 - 0.299728
nusB probable N utilization substance protein Bchromosome CDS2102298 408 - 0.247549
nusG transcription antitermination proteinchromosome CDS2768161 522 - 0.335249
parB ParB proteinpCP13 CDS1751 1281 + 0.234973
recG ATP-dependent DNA helicasechromosome CDS2007021 2073 - 0.283165
relA GTP pyrophosphokinasechromosome CDS2219623 2181 - 0.298028
rho transcription terminator Rho factorchromosome CDS2526259 1440 - 0.294444
rncS ribonuclease IIIchromosome CDS1997415 714 - 0.27451
rnr ribonuclease Rchromosome CDS1530963 2256 - 0.314716
rpoA RNA polymerase alpha subunitchromosome CDS2737177 948 - 0.317511
rpoB RNA polymerase beta subunitchromosome CDS2761768 3705 - 0.349798
rpoC RNA polymerase beta' subunitchromosome CDS2758152 3537 - 0.343794
rpoZ probable DNA-directed RNA polymerase omega subunitchromosome CDS2025081 213 - 0.29108
sigA transcription initiation factor sigma Achromosome CDS2298082 1122 - 0.322638
sigE probable transcription initiation factor sigma Echromosome CDS2040448 708 - 0.285311
sigF RNA polymerase sigma-F factorchromosome CDS2339314 756 - 0.30291
sigG probable transcription initiation factor sigma Gchromosome CDS2039600 813 - 0.301353
sigH RNA polymerase sigma-H factorchromosome CDS2770748 648 - 0.280864
sigK probable transcription initiation factor sigma Kchromosome CDS2046088 702 - 0.294872
sigL RNA polymerase sigma factor sigma54chromosome CDS1546057 1386 - 0.28355
sigV RNA polymerase ECF-type sigma factorchromosome CDS694087 576 + 0.241319
sigW RNA polymerase ECF-type sigma factorchromosome CDS890124 519 + 0.279383
spo0J stage 0 sporulation protein Jchromosome CDS3022236 861 - 0.271777
spoIIE stage II sprulation protein Echromosome CDS2831053 2391 - 0.282309
treR probable transcriptional regulatorchromosome CDS699647 708 + 0.282486
virI two-component response regulatorchromosome CDS2408055 699 - 0.280401
virR two-component response regulatorchromosome CDS1753301 711 - 0.25879