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COG category: Transcription
Organism: Bacillus halodurans C-125, C-125

Number of genes found: 336

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Bacillus halodurans C-125, C-125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
BH0080 serine/threonine-protein kinasechromosome CDS98730 984 + 0.458333
BH0086 chromosome CDS105179 765 + 0.414379
BH0096 chromosome CDS114147 222 + 0.459459
BH0181 chromosome CDS198273 726 - 0.444904
BH0212 transcriptional regulator (Lrp/AsnC family)chromosome CDS227903 441 + 0.424036
BH0264 chromosome CDS284117 642 + 0.428349
BH0271 two-component response regulatorchromosome CDS293244 693 + 0.353535
BH0288 two-component response regulatorchromosome CDS311225 678 + 0.399705
BH0292 chromosome CDS315455 534 + 0.445693
BH0306 chromosome CDS327296 432 + 0.456019
BH0317 chromosome CDS335323 573 - 0.411867
BH0325 chromosome CDS343827 573 - 0.338569
BH0345 transcriptional regulator (phage-related)chromosome CDS370443 351 - 0.481481
BH0346 chromosome CDS370954 279 + 0.444444
BH0353 chromosome CDS379095 594 + 0.430976
BH0359 chromosome CDS384858 747 + 0.47925
BH0364 transcriptional regulatorchromosome CDS394809 201 + 0.412935
BH0372 two-component response regulatorchromosome CDS401097 669 + 0.470852
BH0383 transcriptional regulator (GntR family)chromosome CDS412630 381 - 0.454068
BH0386 chromosome CDS414230 885 + 0.492655
BH0391 chromosome CDS419566 705 - 0.469504
BH0398 two-component response regulatorchromosome CDS425952 714 + 0.428571
BH0401 chromosome CDS429508 900 + 0.418889
BH0406 chromosome CDS432501 525 + 0.377143
BH0411 chromosome CDS436194 996 + 0.438755
BH0419 transcriptional regulator (GntR family)chromosome CDS446868 723 + 0.406639
BH0423 transcriptional regulatorchromosome CDS451343 435 - 0.462069
BH0426 chromosome CDS454236 498 + 0.431727
BH0428 transcriptional regulator (TetR/AcrR family)chromosome CDS455756 558 - 0.396057
BH0432 transcriptional regulator (GntR family)chromosome CDS458511 1449 + 0.47274
BH0460 transcriptional regulatorchromosome CDS487350 225 - 0.404444
BH0466 chromosome CDS491844 504 + 0.44246
BH0478 chromosome CDS502045 474 + 0.438819
BH0508 chromosome CDS536355 309 - 0.417476
BH0521 chromosome CDS549113 288 + 0.395833
BH0531 chromosome CDS554948 2187 + 0.432556
BH0564 chromosome CDS598205 711 + 0.381153
BH0575 chromosome CDS610042 309 - 0.404531
BH0578 transcriptional regulator (GntR family)chromosome CDS611438 1410 + 0.419149
BH0580 transcriptional regulator (TetR/AcrR family)chromosome CDS614532 582 + 0.448454
BH0581 two-component response regulatorchromosome CDS615114 606 - 0.447195
BH0586 chromosome CDS619132 921 + 0.401737
BH0587 chromosome CDS620108 348 + 0.454023
BH0594 transcriptional regulator (AraC/XylS family)chromosome CDS627526 846 + 0.434988
BH0641 chromosome CDS695639 549 + 0.471767
BH0645 transcriptional regulatorchromosome CDS697111 411 - 0.445255
BH0651 transcriptional regulator (GntR family)chromosome CDS705383 372 + 0.419355
BH0655 chromosome CDS708747 342 + 0.385965
BH0656 chromosome CDS709259 399 + 0.468672
BH0672 RNA polymerase ECF-type sigma factorchromosome CDS725217 858 + 0.45338
BH0694 transcriptional regulator (ArsR family)chromosome CDS750012 330 + 0.457576
BH0700 transcriptional repressor of the xylose operonchromosome CDS756753 1167 - 0.413025
BH0711 transcriptional regulator (AraC/XylS family)chromosome CDS770361 792 + 0.401515
BH0717 chromosome CDS779180 306 - 0.379085
BH0719 transcriptional regulator (TetR/AcrR family)chromosome CDS780018 567 - 0.368607
BH0724 transcriptional regulator (AraC/XylS family)chromosome CDS785591 897 - 0.434783
BH0737 cinnamoyl ester hydrolasechromosome CDS798248 357 - 0.417367
BH0755 two-component response regulatorchromosome CDS818068 699 - 0.414878
BH0770 chromosome CDS835349 387 + 0.397933
BH0780 transcriptional regulatorchromosome CDS844531 951 + 0.431125
BH0781 transcription antiterminator (BigG family)chromosome CDS845788 759 + 0.367589
BH0786 transcriptional regulatorchromosome CDS853749 909 + 0.49505
BH0797 glucose kinasechromosome CDS869630 882 + 0.482993
BH0801 transcriptional regulatorchromosome CDS874106 780 + 0.451282
BH0820 two-component response regulatorchromosome CDS891039 705 - 0.391489
BH0826 transcriptional repressorchromosome CDS897723 756 + 0.44709
BH0839 transcriptional regulatorchromosome CDS911953 852 - 0.413146
BH0845 transcriptional antiterminatorchromosome CDS920170 831 - 0.418773
BH0847 transcriptional repressorchromosome CDS922256 780 - 0.425641
BH0851 transcriptional regulator (AraC/XylS family)chromosome CDS924692 786 - 0.440204
BH0868 transcriptional regulatorchromosome CDS940358 450 - 0.422222
BH0901 transcriptional regulatorchromosome CDS974015 990 + 0.327273
BH0907 transcriptional regulatorchromosome CDS982097 714 + 0.47479
BH0914 transcriptional regulator (GntR family)chromosome CDS987400 747 - 0.406961
BH0920 diaminobutyric acid acetyltransferasechromosome CDS994065 570 - 0.419298
BH0944 transcriptional regulatorchromosome CDS1011829 324 + 0.37963
BH0945 transcriptional regulator (ArsR family)chromosome CDS1012416 300 + 0.406667
BH0955 chromosome CDS1027427 486 + 0.423868
BH0969 SNF2 helicasechromosome CDS1041342 1734 - 0.361592
BH0987 transcriptional regulator (TetR/AcrR family)chromosome CDS1062820 612 + 0.400327
BH0988 chromosome CDS1063492 600 + 0.411667
BH0989 transcriptional regulator (AraC/XylS family)chromosome CDS1064165 837 + 0.444444
BH0992 transcriptional regulatorchromosome CDS1067820 1365 + 0.452015
BH1000 chromosome CDS1076518 453 + 0.401766
BH1001 chromosome CDS1077208 1347 + 0.377877
BH1002 transcriptional regulator (TetR family)chromosome CDS1078817 606 - 0.354785
BH1009 chromosome CDS1088327 348 - 0.45977
BH1041 chromosome CDS1121617 480 + 0.45625
BH1044 chromosome CDS1123076 324 + 0.401235
BH1051 two-component response regulatorchromosome CDS1128982 639 + 0.452269
BH1057 chromosome CDS1136188 441 - 0.396825
BH1062 transcriptional regulator (GntR family)chromosome CDS1143292 681 + 0.43025
BH1073 acetyltransferasechromosome CDS1155898 456 + 0.421053
BH1075 transcriptional antiterminator of glycerol uptake operonchromosome CDS1157543 606 + 0.458746
BH1094 transcriptional repressor of the xylose operonchromosome CDS1179894 1224 + 0.44281
BH1127 aminotransferasechromosome CDS1222169 1203 + 0.448878
BH1153 two-component response regulatorchromosome CDS1250215 699 + 0.41774
BH1164 transcriptional regulator (GntR family)chromosome CDS1262517 408 + 0.419118
BH1172 two-component response regulatorchromosome CDS1269410 684 + 0.407895
BH1196 chromosome CDS1287481 663 + 0.437406
BH1200 two-component response regulatorchromosome CDS1290956 630 + 0.438095
BH1250 transcriptional regulator (LacI family)chromosome CDS1343984 1017 + 0.46706
BH1259 chromosome CDS1354675 420 + 0.42619
BH1383 transcriptional factorchromosome CDS1467311 495 - 0.422222
BH1385 ATP-dependent RNA helicasechromosome CDS1468884 1317 + 0.464692
BH1408 chromosome CDS1492163 471 + 0.450106
BH1438 chromosome CDS1525176 435 - 0.450575
BH1443 transcriptional regulatorchromosome CDS1527875 324 - 0.416667
BH1444 chromosome CDS1528367 219 + 0.456621
BH1453 chromosome CDS1533659 987 + 0.441743
BH1471 chromosome CDS1551021 207 - 0.386473
BH1494 transcriptional regulatorchromosome CDS1571567 303 - 0.419142
BH1516 glucose-resistance amylase regulatorchromosome CDS1594512 1032 - 0.429264
BH1553 transcriptional regulator (DeoR family)chromosome CDS1633647 756 + 0.445767
BH1561 chromosome CDS1640612 594 + 0.479798
BH1582 chromosome CDS1659037 432 - 0.44213
BH1614 chromosome CDS1688574 939 + 0.473908
BH1626 chromosome CDS1699686 162 + 0.469136
BH1699 chromosome CDS1772284 498 + 0.459839
BH1706 chromosome CDS1782727 525 + 0.426667
BH1786 transcriptional regulator (AraC/XylS family)chromosome CDS1856501 699 - 0.477825
BH1787 transcriptional regulator (LysR family)chromosome CDS1857331 843 - 0.468565
BH1792 ATP-dependent helicasechromosome CDS1863689 1932 + 0.456004
BH1808 two-component response regulatorchromosome CDS1883069 696 + 0.402299
BH1815 chromosome CDS1889922 996 + 0.40261
BH1819 transcriptional regulator (IclR family)chromosome CDS1893323 759 - 0.450593
BH1835 transcriptional regulator (GntR family)chromosome CDS1912692 651 + 0.465438
BH1836 chromosome CDS1913621 630 + 0.396825
BH1855 transcriptional regulatorchromosome CDS1931921 981 + 0.441386
BH1869 chromosome CDS1947838 942 - 0.403397
BH1879 transcriptional regulator (sigma-L-dependent)chromosome CDS1963010 1668 + 0.428657
BH1887 chromosome CDS1973221 870 + 0.398851
BH1889 chromosome CDS1975002 978 - 0.437628
BH1906 transcriptional regulator (AraC/XylS family)chromosome CDS1993521 900 + 0.428889
BH1918 chromosome CDS2008062 513 - 0.395712
BH1928 transcriptional regulator (LacI family)chromosome CDS2018587 1008 + 0.422619
BH1940 transcriptional regulator (GntR family)chromosome CDS2035641 1203 + 0.43724
BH1944 two-component response regulatorchromosome CDS2039725 690 + 0.455072
BH1965 transcriptional regulator (TetR/AcrR family)chromosome CDS2060112 591 + 0.389171
BH1968 transcriptional regulatorchromosome CDS2062971 462 + 0.443723
BH1990 spore germination proteinchromosome CDS2087250 537 - 0.417132
BH2026 RNA polymerase ECF-type sigma factorchromosome CDS2134035 540 + 0.392593
BH2043 chromosome CDS2157833 2565 + 0.396101
BH2061 transcriptional regulator (MarR family)chromosome CDS2182436 450 + 0.466667
BH2086 transcriptional regulator (ArsR family)chromosome CDS2210620 330 + 0.451515
BH2094 transcriptional regulator (LysR family)chromosome CDS2217423 699 + 0.37196
BH2097 two-component response regulatorchromosome CDS2220217 633 + 0.448657
BH2103 chromosome CDS2227268 567 + 0.419753
BH2117 transcriptional regulator (LysR family)chromosome CDS2245071 873 + 0.400916
BH2118 chromosome CDS2246087 1068 + 0.420412
BH2123 two-component response regulatorchromosome CDS2251525 672 + 0.380952
BH2137 transcriptional regulator (IclR family)chromosome CDS2264572 756 - 0.43254
BH2145 transcriptional regulator (TetR/AcrR family)chromosome CDS2273001 582 + 0.408935
BH2153 chromosome CDS2280045 453 - 0.328918
BH2157 chromosome CDS2283473 543 - 0.451197
BH2164 chromosome CDS2289573 462 - 0.378788
BH2168 transcriptional regulator (DeoR family)chromosome CDS2293063 780 - 0.429487
BH2176 transcriptional regulator (MarR family)chromosome CDS2299852 438 - 0.431507
BH2213 two-component response regulatorchromosome CDS2336283 654 - 0.432722
BH2229 transcriptional regulator (AraC/XylS family)chromosome CDS2355989 864 + 0.402778
BH2264 two-component response regulatorchromosome CDS2389653 696 - 0.445402
BH2313 transcriptional regulatorchromosome CDS2435951 1014 + 0.434911
BH2384 ATP-dependent RNA helicasechromosome CDS2504383 1620 - 0.44321
BH2394 transcriptional regulator (GntR family)chromosome CDS2514197 729 - 0.44856
BH2415 chromosome CDS2536597 276 - 0.42029
BH2516 fibronectin/fibrinogen-binding proteinchromosome CDS2637243 1713 + 0.476941
BH2580 chromosome CDS2705014 510 + 0.429412
BH2609 chromosome CDS2726649 297 + 0.444444
BH2610 chromosome CDS2726885 198 + 0.474747
BH2647 transcriptional regulator (GntR family)chromosome CDS2768737 372 + 0.413978
BH2675 transcriptional regulator (RpiR family)chromosome CDS2794969 864 + 0.440972
BH2695 transcriptional regulator (GntR family)chromosome CDS2813789 1389 + 0.429806
BH2701 two-component response regulatorchromosome CDS2820717 696 - 0.393678
BH2712 transcriptional regulator (LysR family)chromosome CDS2829697 891 - 0.469136
BH2721 chromosome CDS2841094 348 + 0.41954
BH2731 chromosome CDS2855202 1116 - 0.429211
BH2734 chromosome CDS2857954 1725 + 0.414493
BH2739 transcriptional regulatorchromosome CDS2862676 1581 - 0.477546
BH2751 two-component response regulatorchromosome CDS2874209 693 - 0.421356
BH2807 transcriptional regulatorchromosome CDS2928931 420 - 0.402381
BH2817 helicase (Snf2/Rad54 family)chromosome CDS2941747 1701 + 0.425044
BH2907 chromosome CDS3023022 456 + 0.377193
BH2909 chromosome CDS3024445 570 - 0.440351
BH2913 SNF2 helicasechromosome CDS3027987 2988 + 0.45415
BH2923 transcriptional regulator involved in carbon catabolite controlchromosome CDS3037275 1035 - 0.451208
BH2940 chromosome CDS3058003 855 - 0.449123
BH2952 Mg-protoporphyrin IX monomethyl ester oxidative cyclasechromosome CDS3070560 1779 + 0.445194
BH2958 transcriptional regulator (TetR/AcrR family)chromosome CDS3079970 648 - 0.398148
BH2996 transcriptional regulator (ArsR family)chromosome CDS3117712 309 - 0.365696
BH3024 chromosome CDS3137880 381 + 0.440945
BH3072 transcriptional regulatorchromosome CDS3192724 456 - 0.392544
BH3077 transcriptional regulator (MarR family)chromosome CDS3196958 453 - 0.348786
BH3102 transcriptional regulator (TetR/AcrR family)chromosome CDS3216849 588 - 0.394558
BH3117 RNA polymerase ECF-type sigma factorchromosome CDS3236028 693 - 0.480519
BH3125 chromosome CDS3243035 429 + 0.433566
BH3146 chromosome CDS3261909 462 - 0.458874
BH3167 transcriptional regulator (GntR family)chromosome CDS3284870 654 - 0.438838
BH3175 chromosome CDS3293778 1308 - 0.455657
BH3207 chromosome CDS3324887 654 - 0.429664
BH3212 chromosome CDS3329060 897 - 0.375697
BH3216 RNA polymerase ECF-type sigma factorchromosome CDS3333341 582 + 0.386598
BH3217 chromosome CDS3333915 723 + 0.430152
BH3223 RNA polymerase ECF-type sigma factorchromosome CDS3336830 729 - 0.406036
BH3230 transcriptional regulator (LacI family)chromosome CDS3347330 1077 - 0.343547
BH3303 chromosome CDS3430091 324 - 0.45679
BH3323 transcriptional regulator (GntR family)chromosome CDS3445124 714 - 0.347339
BH3330 chromosome CDS3451641 636 - 0.430818
BH3332 chromosome CDS3452963 588 + 0.428571
BH3348 RNA helicasechromosome CDS3464647 1170 - 0.453846
BH3351 transcriptional regulator (Lrp/AsnC family)chromosome CDS3468404 495 - 0.440404
BH3361 chromosome CDS3476587 429 - 0.44289
BH3362 chromosome CDS3477012 552 - 0.422101
BH3394 chromosome CDS3510648 561 - 0.386809
BH3426 two-component response regulatorchromosome CDS3538718 726 - 0.417355
BH3429 chromosome CDS3541881 648 - 0.422839
BH3443 transcriptional regulator (AraC/XylS family)chromosome CDS3555425 624 - 0.405449
BH3457 transcriptional regulatorchromosome CDS3569331 156 - 0.352564
BH3475 chromosome CDS3584155 594 - 0.456229
BH3492 transcriptional regulator (GntR family)chromosome CDS3600360 390 + 0.430769
BH3496 transcriptional regulator of multidrug-efflux transporter geneschromosome CDS3603071 816 - 0.335784
BH3506 transcriptional regulator (AraC/XylS family)chromosome CDS3615215 894 - 0.404922
BH3534 chromosome CDS3641135 480 - 0.439583
BH3536 chromosome CDS3643359 465 - 0.372043
BH3538 chromosome CDS3644085 192 - 0.432292
BH3548 chromosome CDS3649558 297 - 0.387205
BH3549 immunity repressor protein (phage-related protein)chromosome CDS3650015 465 + 0.430108
BH3553 ribonuclease Rchromosome CDS3653266 2316 - 0.470207
BH3561 transcriptional regulatorchromosome CDS3663024 1020 - 0.493137
BH3576 transcriptional regulator (hex regulon repressor)chromosome CDS3678907 855 - 0.444444
BH3592 chromosome CDS3692629 198 - 0.464646
BH3632 RNA polymerase ECF-type sigma factorchromosome CDS3732993 963 - 0.448598
BH3634 transcriptional regulator (AraC/XylS family)chromosome CDS3734596 903 - 0.449612
BH3641 transcriptional regulatorchromosome CDS3743142 459 - 0.352941
BH3647 transcriptional regulatorchromosome CDS3750198 1080 + 0.426852
BH3675 transcriptional regulator (MerR family)chromosome CDS3788597 396 - 0.416667
BH3692 transcriptional regulatorchromosome CDS3808830 1014 - 0.427022
BH3702 transcriptional regulatorchromosome CDS3821994 840 + 0.427381
BH3733 transcriptional regulator (TetR/AcrR family)chromosome CDS3856502 603 - 0.446103
BH3797 transcriptional regulator (TetR/AcrR family)chromosome CDS3918209 609 - 0.430213
BH3804 chromosome CDS3927211 504 - 0.482143
BH3815 transcriptional regulatorchromosome CDS3937093 459 + 0.3878
BH3853 transcriptional antiterminatorchromosome CDS3977958 2103 - 0.45554
BH3858 transcriptional regulator (MerR family)chromosome CDS3983691 360 - 0.286111
BH3882 RNA polymerase ECF-type sigma factorchromosome CDS4011655 465 - 0.447312
BH3884 chromosome CDS4012701 387 - 0.423773
BH3887 chromosome CDS4015192 909 - 0.441144
BH3899 transcriptional regulatorchromosome CDS4029721 1680 - 0.444643
BH3911 two-component response regulatorchromosome CDS4044369 696 + 0.418103
BH3917 transcriptional regulator (GntR family)chromosome CDS4052915 786 - 0.431298
BH3925 transcriptional regulator (LysR family)chromosome CDS4061485 870 + 0.414943
BH3929 chromosome CDS4065924 861 - 0.430894
BH3935 transcriptional regulatorchromosome CDS4071392 462 + 0.352814
BH3951 chromosome CDS4091134 555 + 0.401802
BH3981 chromosome CDS4120237 294 - 0.44898
BH3982 transcriptional pleiotropic regulator of transition state geneschromosome CDS4121573 291 + 0.402062
BH3993 chromosome CDS4132480 219 - 0.420091
BH4027 two-component response regulatorchromosome CDS4162111 711 - 0.45429
BH4037 cadmium-binding protein (cadmium efflux system accessory protein)chromosome CDS4174956 369 - 0.471545
BH4044 transcriptional regulator (MarR family)chromosome CDS4182601 474 + 0.449367
BH4046 transcriptional regulator of the bltD operonchromosome CDS4184695 294 + 0.377551
BH4047 chromosome CDS4185003 510 + 0.394118
BH4059 DNA-binding protein Spo0J-like homologchromosome CDS4194477 852 - 0.4777
abrB transcriptional pleiotropic regulator of transition state geneschromosome CDS65879 291 - 0.378007
aciR transcriptional activator of the acetoin dehydrogenase operonchromosome CDS1901313 1872 + 0.429487
ahrC transcriptional regulator of arginine metabolism expressionchromosome CDS2904322 450 - 0.397778
araR transcriptional repressor of the arabinose operonchromosome CDS1956185 1128 + 0.419326
arsR transcriptional regulator (ArsR family)chromosome CDS3120785 351 - 0.441595
ccpA transcriptional regulator involved in carbon catabolite controlchromosome CDS3360510 1002 - 0.438124
citT two-component response regulatorchromosome CDS3961548 693 - 0.457431
codY transcriptional pleiotropic repressorchromosome CDS2579815 780 - 0.408974
cspC cold-shock proteinchromosome CDS3714320 198 - 0.414141
ctsR transcriptional repressor of class III stress geneschromosome CDS132792 471 + 0.394904
degA transcriptional regulator involved in degradationchromosome CDS2342532 1008 - 0.460317
degU two-component response regulator involved in degradative enzymechromosome CDS3729401 711 - 0.40647
dinG ATP-dependent DNA helicasechromosome CDS1762640 2829 + 0.443973
flgM flagellin synthesis regulatory protein (anti-sigma factor)chromosome CDS3725082 261 - 0.417625
gerE transcriptional regulator of spore coat protein (spore germination protein)chromosome CDS3195911 225 + 0.448889
glk glucose kinasechromosome CDS1512180 993 + 0.478348
glpP transcriptional antiterminator of glycerol uptake operonchromosome CDS1176634 552 + 0.443841
gltC transcriptional activator of the glutamate synthase operon (LysR family)chromosome CDS2226014 906 + 0.427152
greA transcriptional elongation factorchromosome CDS1371980 477 + 0.417191
hpr transcriptional repressor of sporulation and extracellular proteinchromosome CDS1279314 579 - 0.411054
hrcA transcriptional repressor of class I heat-shock geneschromosome CDS1429386 1032 + 0.42345
hutP transcriptional activator of the histidine utilization operonchromosome CDS2076426 444 + 0.475225
kdgR transcriptional regulator (IclR family)chromosome CDS3848537 756 - 0.493386
lacR transcriptional repressor (beta-galactosidase gene)chromosome CDS2122208 993 + 0.399799
lexA transcriptional repressor of the SOS regulonchromosome CDS2472549 624 + 0.445513
licT transcription antiterminator (BigG family)chromosome CDS321047 834 + 0.384892
lrpC transcriptional regulator (Lrp/AsnC family)chromosome CDS4007374 465 - 0.447312
lytR attenuator for lytABC and lytR expressionchromosome CDS3782911 915 + 0.431694
mfd transcription-repair coupling factor (TRCF)chromosome CDS85041 3546 + 0.445854
msmR transcriptional regulator (AraC/XylS family)chromosome CDS2353193 1044 - 0.423372
mta transcriptional activator of multidrug-efflux transporter geneschromosome CDS433876 768 + 0.43099
nusA transcriptional terminatorchromosome CDS2536887 1149 - 0.451697
nusB transcriptional terminatorchromosome CDS2912394 405 - 0.432099
nusG transcriptional antitermination factorchromosome CDS149883 537 + 0.441341
paiA transcriptional repressor of sporulation, septation and degradationchromosome CDS3196413 477 - 0.341719
paiB transcriptional repressor of sporulation and degradative enzymes productionchromosome CDS437265 630 + 0.419048
phaN repressor in the phenylacetic acid catabolic pathwaychromosome CDS211948 897 - 0.426979
phoP two-component response regulator involved in phosphate regulationchromosome CDS3274229 720 - 0.4125
rbsR transcriptional repressor of the ribose operonchromosome CDS3850540 996 + 0.462851
recG ATP-dependent DNA helicasechromosome CDS2613137 2022 - 0.477745
relA GTP pyrophosphokinase (stringent response)chromosome CDS1334544 2187 + 0.440786
resD two-component response regulatorchromosome CDS1656452 717 + 0.433752
rho transcriptional terminatorchromosome CDS3899715 1272 - 0.450472
ribT reductase (riboflavin biosynthesis)chromosome CDS1638725 348 + 0.402299
rncS ribonuclease IIIchromosome CDS2608301 792 - 0.448232
rocR transcriptional activator of arginine utilization operonschromosome CDS4082135 1440 + 0.447222
rpoA DNA-directed RNA polymerase alpha subunitchromosome CDS182420 945 + 0.439153
rpoB DNA-directed RNA polymerase beta subunitchromosome CDS155663 3543 + 0.462885
rpoC DNA-directed RNA polymerase beta' subunitchromosome CDS159295 3621 + 0.465617
rpoE DNA-directed RNA polymerase delta subunitchromosome CDS3913020 495 - 0.418182
rpoZ DNA-directed RNA polymerase omega subunitchromosome CDS2631892 207 - 0.434783
rsbU indirect positive regulator of sigma-B activity (serine phosphatase)chromosome CDS551560 1014 + 0.424063
sigA RNA polymerase major sigma factorchromosome CDS1461302 1119 + 0.45487
sigB RNA polymerase general stress sigma factor(sigma B)chromosome CDS553422 786 + 0.451654
sigD RNA polymerase sigma-D factorchromosome CDS2554839 771 - 0.417639
sigE RNA polymerase sporulation mother cell-specific (early) sigma-29 factorchromosome CDS2678964 714 - 0.417367
sigF RNA polymerase sigma-F factor (stage II sporulation protein AC)chromosome CDS1614327 759 + 0.445323
sigG RNA polymerase sporulation forespore-specific (late) sigma-G factorchromosome CDS2678028 786 - 0.43257
sigH RNA polymerase sigma-H factor (sigma-30)chromosome CDS148368 654 + 0.422018
sigK RNA polymerase sigma factor (sigma K) precursorchromosome CDS1378498 708 + 0.416667
sigL RNA polymerase sigma factor (sigma54)chromosome CDS3664458 1338 - 0.440957
sigV RNA polymerase ECF-type sigma factorchromosome CDS674792 534 - 0.417603
sigW RNA polymerase ECF-type sigma factorchromosome CDS283538 564 + 0.450355
sigY RNA polymerase sigma factor Ychromosome CDS1689891 531 + 0.442561
sinR transcriptional regulator of post-exponential-phase responses (PbsX(xre) family)chromosome CDS2253120 339 - 0.39233
spo0J stage 0 sporulation protein Jchromosome CDS4192710 867 - 0.464821
spoIIE stage II sporulation protein Echromosome CDS95376 2493 + 0.446851
spoIIID transcriptional regulator of sigma-E-and sigma-K-dependentchromosome CDS3861747 285 - 0.435088
spoVT stage V sporulation protein Tchromosome CDS88747 540 + 0.448148
tenA transcriptional regulator of extracellular enzyme geneschromosome CDS2800623 675 + 0.448889
treR transcriptional repressor of the trehalose operonchromosome CDS946119 714 + 0.404762
ureG urease accessory proteinchromosome CDS278495 627 + 0.472089
xre transcriptional repressor of PBSX geneschromosome CDS1381009 339 - 0.39823
xylR transcriptional repressor of the xylose operonchromosome CDS2883278 1161 + 0.44789