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2024-05-02 21:30:43

Gene list

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COG category: Transcription
Organism: Staphylococcus saprophyticus subsp. saprophyticus, ATCC 15305

Number of genes found: 202

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Staphylococcus saprophyticus subsp. saprophyticus, ATCC 15305
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSP2438 putative transcriptional regulatorchromosome CDS2507381 759 - 0.337286
NA SSP0103 Lactose operon transcription activatorchromosome CDS118073 846 - 0.299054
NA SSP1628 truncated transcriptional regulatorchromosome CDS1695173 270 + 0.292593
NA SSP1390 peptide methionine sulfoxide reductase regulator MsrRchromosome CDS1433220 984 - 0.340447
NA SSP2103 staphylococcal accessory regulator Achromosome CDS2170583 375 + 0.269333
NA SSP2280 putative transcriptional regulatorchromosome CDS2359499 726 - 0.347107
NA SSP2346 hypothetical proteinchromosome CDS2424632 420 - 0.342857
NA SSP0548 putative transcriptional regulatorchromosome CDS583589 549 - 0.29326
NA SSP0250 putative transcriptional regulatorchromosome CDS279089 1092 + 0.307692
NA SSP0763 transcription termination factorchromosome CDS795044 1317 + 0.354594
NA SSP0500 putative acetyltransferasechromosome CDS532346 540 + 0.338889
NA SSP2312 cold shock proteinchromosome CDS2395723 201 - 0.402985
NA SSP1002 repressor of toxinschromosome CDS1033032 402 + 0.288557
NA SSP0628 putative transcriptional regulatorchromosome CDS664918 1005 + 0.358209
NA SSP2238 transcriptional regulatorchromosome CDS2299597 1380 + 0.323913
NA SSP0283 putative transcriptional regulatorchromosome CDS308808 564 - 0.329787
NA SSP2332 putative transcriptional regulatorchromosome CDS2414125 354 + 0.341808
NA SSP2420 conserved hypothetical proteinchromosome CDS2489042 363 + 0.283747
NA SSP0836 sucrose operon repressorchromosome CDS868694 954 + 0.333333
NA SSP0534 putative acetyltransferasechromosome CDS566029 519 + 0.354528
NA SSP0132 transcriptional regulatorchromosome CDS148353 567 - 0.296296
NA SSP0689 DNA-directed RNA polymerase alpha chainchromosome CDS711262 945 + 0.338624
NA SSP2141 transcriptional regulatorchromosome CDS2204495 423 - 0.371158
NA SSP1151 transcription elongation factorchromosome CDS1199470 477 + 0.333333
NA SSP0102 transcriptional regulatorchromosome CDS117620 339 + 0.315634
NA SSP0330 putative transcriptional regulatorchromosome CDS362064 876 + 0.309361
NA SSP0122 putative truncated transcriptional regulatorchromosome CDS140316 426 + 0.248826
NA SSP1027 catabolite control proteinchromosome CDS1061727 990 + 0.326263
NA SSP0148 truncated transcriptional regulatorchromosome CDS170479 486 + 0.355967
NA SSP1635 transcriptional regulatorchromosome CDS1700222 459 + 0.309368
NA SSP1452 glutamine synthetase repressorchromosome CDS1502849 369 - 0.317073
NA SSP1234 arginine repressorchromosome CDS1273484 453 + 0.304636
NA SSP0851 putative acetyltransferasechromosome CDS883483 489 - 0.335378
NA SSP0186 putative transcriptional regulatorchromosome CDS210972 1386 + 0.323232
NA SSP0273 putative transcriptional regulatorchromosome CDS299742 414 + 0.301932
NA SSP1604 putative transcriptional regulatorchromosome CDS1676238 315 - 0.279365
NA SSP1073 alkaline phosphatase synthesis transcriptional regulatory proteinchromosome CDS1117627 711 + 0.33474
NA SSP2213 DNA-directed RNA polymerase beta subunitchromosome CDS2273935 3552 - 0.384009
NA SSP1175 Heat-inducible transcriptional repressorchromosome CDS1220101 981 + 0.299694
NA SSP1441 hypothetical proteinchromosome CDS1494295 456 - 0.287281
NA SSP2212 DNA-directed RNA polymerase beta' subunitchromosome CDS2270172 3624 - 0.37362
NA SSP0362 putative transcriptional regulatorchromosome CDS398064 1017 + 0.337266
NA SSP1209 glucose kinasechromosome CDS1252961 987 + 0.344478
NA SSP0040 hypothetical proteinchromosome CDS48684 1194 + 0.262144
NA SSP0814 truncated RNA polymerase sigma-B factorchromosome CDS837694 579 + 0.340242
NA SSP2309 truncated transcriptional regulatorchromosome CDS2393444 285 - 0.329825
NA SSP2439 putative transcriptional regulatorchromosome CDS2508249 564 - 0.303191
NA SSP1247 transcriptional regulatorchromosome CDS1290147 882 - 0.343537
NA SSP0541 response regulatorchromosome CDS576010 675 - 0.311111
NA SSP2181 transcriptional regulatorchromosome CDS2241224 783 + 0.355045
NA SSP1751 conserved hypothetical proteinchromosome CDS1824046 558 - 0.351254
NA SSP0390 putative transcriptional regulatorchromosome CDS425489 432 + 0.333333
NA SSP0382 putative truncated beta-glucoside operon antiterminatorchromosome CDS416354 264 - 0.310606
NA SSP0947 two-component response regulatorchromosome CDS979504 624 + 0.304487
NA SSP0256 putative transcriptional regulatorchromosome CDS285621 555 - 0.34955
NA SSP0598 conserved hypothetical proteinchromosome CDS635241 693 - 0.301587
NA SSP1260 staphylococcal respiratory response protein SrrAchromosome CDS1301864 726 + 0.35124
NA SSP0410 gluconate operon transcriptional repressorchromosome CDS448416 681 + 0.32746
NA SSP0545 putative transcriptional regulatorchromosome CDS579943 465 + 0.32043
NA SSP0493 putative transcriptional regulatorchromosome CDS528303 339 - 0.283186
NA SSP0194 putative transcriptional regulatorchromosome CDS222103 561 - 0.354724
NA SSP0810 serine phosphatase RsbU regulator of sigma subunitchromosome CDS835642 1002 + 0.311377
NA SSP0571 putative transcriptional regulatorchromosome CDS608296 876 - 0.319635
NA SSP0373 putative transcriptional regulatorchromosome CDS408265 798 + 0.325815
NA SSP0909 two-component response regulatorchromosome CDS936938 630 + 0.344444
NA SSP1401 transcription antiterminatorchromosome CDS1446604 846 - 0.28487
NA SSP0094 transcriptional regulatorchromosome CDS111330 390 - 0.297436
NA SSP2153 putative transcriptional regulator sarA paralogchromosome CDS2214995 339 + 0.259587
NA SSP0510 putative transcriptional regulatorchromosome CDS540471 2106 - 0.283001
NA SSP1745 putative transcriptional regulatorchromosome CDS1817286 453 - 0.262693
NA SSP0757 DNA-directed RNA polymerase delta subunitchromosome CDS787347 549 + 0.315118
NA SSP2085 putative metalloregulatorchromosome CDS2154027 645 - 0.305426
NA SSP0374 putative ROK family proteinchromosome CDS409147 873 - 0.34937
NA SSP1945 hypothetical proteinchromosome CDS2003915 222 - 0.243243
NA SSP1620 putative transcriptional regulatorchromosome CDS1684957 345 + 0.266667
NA SSP1502 transcription termination-antitermination factorchromosome CDS1556524 1194 - 0.370184
NA SSP2430 putative truncated transcriptional regulatorchromosome CDS2499551 264 - 0.348485
NA SSP2219 transcription antitermination factorchromosome CDS2281552 549 - 0.355191
NA SSP0986 putative DNA-binding proteinchromosome CDS1019059 471 - 0.254777
NA SSP0227 putative transcriptional regulatorchromosome CDS256481 585 + 0.365812
NA SSP1320 putative acetyltransferasechromosome CDS1362534 510 + 0.3
NA SSP0381 putative truncated transcription antiterminatorchromosome CDS415815 339 - 0.342183
NA SSP2041 putative bifunctional protein: transcriptional regulator; aminotransferasechromosome CDS2107773 1455 + 0.340893
NA SSP2185 transcriptional regulatorchromosome CDS2245393 876 - 0.328767
NA SSP2064 putative acetyltransferasechromosome CDS2130820 507 + 0.357002
NA SSP1329 truncated transcriptional regulatorchromosome CDS1373559 627 - 0.30622
NA SSP0952 hypothetical proteinchromosome CDS985505 465 + 0.331183
NA SSP2289 hypothetical proteinchromosome CDS2374433 882 - 0.343537
NA SSP0815 putative RNA binding proteinchromosome CDS838420 2151 + 0.320781
NA SSP0850 transcriptional regulatorchromosome CDS882981 474 + 0.274262
NA SSP1245 transcriptional regulatorchromosome CDS1287381 1005 + 0.320398
NA SSP0345 putative transcriptional regulatorchromosome CDS377483 882 + 0.311791
NA SSP1561 putative DNA-directed RNA polymerase subunit K omegachromosome CDS1629482 213 - 0.319249
NA SSP0420 putative acetyltransferasechromosome CDS457581 501 + 0.357285
NA SSP1418 SOS-response transcriptional repressorchromosome CDS1470200 624 + 0.341346
NA SSP0789 putative transcriptional regulatorchromosome CDS816772 690 + 0.295652
NA SSP2116 putative acetyltransferasechromosome CDS2183065 480 - 0.310417
NA SSP2045 putative acetyltransferasechromosome CDS2110860 468 - 0.324786
NA SSP2032 putative transcriptional regulatorchromosome CDS2099616 444 + 0.326577
NA SSP1230 putative antitermination proteinchromosome CDS1270012 387 + 0.310078
NA SSP1595 putative acetyltransferasechromosome CDS1667160 441 + 0.340136
NA SSP1738 putative transcriptional regulatorchromosome CDS1807054 1293 + 0.318639
NA SSP1323 response regulator ArlRchromosome CDS1365242 663 + 0.331825
NA SSP0514 putative transcriptional regulatorchromosome CDS546173 606 - 0.283828
NA SSP1195 RNA polymerase sigma factor Achromosome CDS1239366 1107 + 0.344173
NA SSP1471 putative transcriptional regulatorchromosome CDS1523989 384 - 0.322917
NA SSP2441 putative transcriptional regulatorchromosome CDS2510671 840 - 0.332143
NA SSP0361 putative transcriptional regulatorchromosome CDS395654 2073 - 0.272069
NA SSP1563 putative fibrinogen binding proteinchromosome CDS1630477 1698 + 0.321555
NA SSP0167 transcriptional regulatorchromosome CDS188370 888 + 0.311937
NA SSP1079 putative transcriptional regulatorchromosome CDS1125943 471 + 0.346072
NA SSP1691 putative transcriptional regulatorchromosome CDS1759070 540 - 0.301852
NA SSP1349 cold shock proteinchromosome CDS1391541 201 + 0.368159
NA SSP1740 putative acetyltransferasechromosome CDS1808915 423 + 0.326241
NA SSP0802 putative ATP-dependent RNA helicasechromosome CDS828784 1521 + 0.364234
NA SSP1488 putative transcriptional regulatorchromosome CDS1540180 714 - 0.336134
NA SSP1907 exoribonucleasechromosome CDS1973249 2391 - 0.365956
NA SSP1742 putative transcriptional regulatorchromosome CDS1814157 426 - 0.286385
NA SSP0139 transcriptional regulatorchromosome CDS161751 453 + 0.315673
NA SSP2050 transcriptional regulatorchromosome CDS2115406 858 - 0.325175
NA SSP0179 putative transcriptional regulatorchromosome CDS200430 1218 + 0.296388
NA SSP0245 putative truncated transcriptional antiterminatorchromosome CDS274312 516 + 0.346899
NA SSP0498 conserved hypothetical proteinchromosome CDS530598 402 - 0.328358
NA SSP1446 response regulatorchromosome CDS1497121 606 - 0.318482
NA SSP1463 glycerol-3-phosphate responsive antiterminatorchromosome CDS1514802 534 - 0.320225
NA SSP0756 putative acetyltransferasechromosome CDS786377 861 + 0.30662
NA SSP0260 urease accessory protein ureGchromosome CDS288133 615 - 0.393496
NA SSP0408 putative truncated transcriptional regulatorchromosome CDS447519 135 + 0.318519
NA SSP0616 staphylococcal accessory regulator Rchromosome CDS654830 348 + 0.25
NA SSP0600 putative transcriptional regulatorchromosome CDS637317 954 + 0.34696
NA SSP0738 putative transcriptional regulatorchromosome CDS768610 699 + 0.329041
NA SSP0472 putative acetyltransferasechromosome CDS508460 501 - 0.335329
NA SSP0085 truncated transcriptional regulatorchromosome CDS102564 633 - 0.298578
NA SSP0447 putative transcriptional regulatorchromosome CDS485003 561 + 0.381462
NA SSP1513 transcription pleiotropic repressorchromosome CDS1571773 774 - 0.326873
NA SSP0183 putative transcriptional regulatorchromosome CDS207283 546 - 0.333333
NA SSP0505 putative transcriptional regulatorchromosome CDS536850 441 - 0.287982
NA SSP2384 putative arsenical resistance operon repressorchromosome CDS2452485 315 - 0.304762
NA SSP0019 putative transcriptional regulatorchromosome CDS25365 459 + 0.335512
NA SSP0531 conserved hypothetical proteinchromosome CDS562699 402 + 0.353234
NA SSP0409 putative truncated transcriptional regulatorchromosome CDS447705 531 + 0.316384
NA SSP0761 putative transcriptional regulatorchromosome CDS792670 324 + 0.345679
NA SSP1125 GTP pyrophosphokinasechromosome CDS1172208 2190 + 0.324201
NA SSP0593 putative transcriptional regulatorchromosome CDS630266 876 - 0.325342
NA SSP0341 putative acetyltransferasechromosome CDS374595 492 + 0.304878
NA SSP2184 transcriptional regulatorchromosome CDS2243602 945 + 0.37672
NA SSP1621 putative transcriptional regulatorchromosome CDS1685707 1413 - 0.324841
NA SSP1198 putative helicasechromosome CDS1242795 1341 + 0.314691
NA SSP2234 transcriptional regulator of class III stress geneschromosome CDS2296137 462 - 0.318182
NA SSP1946 hypothetical proteinchromosome CDS2004298 825 + 0.264242
NA SSP1875 hypothetical proteinchromosome CDS1953514 537 + 0.329609
NA SSP2359 transcriptional regulatorchromosome CDS2434158 615 - 0.356098
NA SSP0092 putative regulatory protein SIR2 familychromosome CDS109057 729 - 0.392318
NA SSP1893 hypothetical proteinchromosome CDS1963751 201 + 0.283582
NA SSP1536 dsRNA-specific ribonuclease RNase IIIchromosome CDS1601701 735 - 0.348299
NA SSP1917 glycolytic operon regulatorchromosome CDS1984033 1029 - 0.376093
NA SSP2385 putative truncated transcriptional regulatorchromosome CDS2453013 564 + 0.27305
NA SSP0112 putative transcriptional regulatorchromosome CDS131950 468 - 0.303419
NA SSP0582 putative transcriptional regulatorchromosome CDS619605 768 - 0.320312
NA SSP0736 putative repressor proteinchromosome CDS767367 300 - 0.35
NA SSP0648 putative transcriptional regulatorchromosome CDS682366 432 - 0.319444
NA SSP0021 response regulatorchromosome CDS28100 702 + 0.363248
NA SSP0198 putative transcriptional regulatorchromosome CDS226447 888 + 0.337838
NA SSP0727 putative transcriptional antiterminatorchromosome CDS755501 2031 - 0.333333
NA SSP1330 truncated transcriptional regulatorchromosome CDS1374198 237 - 0.308017
NA SSP0523 putative transcriptional regulator of sugar metabolismchromosome CDS555568 765 - 0.320261
NA SSP1755 putative regulatory proteinchromosome CDS1826238 567 - 0.299824
NA SSP2349 conserved hypothetical proteinchromosome CDS2426927 435 - 0.347126
NA SSP2062 response regulatorchromosome CDS2129094 675 - 0.314074
NA SSP1133 putative transcriptional regulatorchromosome CDS1181808 420 + 0.345238
NA SSP1944 putative prophage antirepressorchromosome CDS2003295 624 - 0.301282
NA SSP0121 hypothetical proteinchromosome CDS139985 270 + 0.292593
NA SSP0171 putative transcriptional regulatorchromosome CDS192302 462 + 0.270563
NA SSP2166 transcriptional regulatorchromosome CDS2224464 891 - 0.323232
NA SSP0842 accessory gene regulator Bchromosome CDS874473 570 - 0.292982
NA SSP2355 transcriptional regulatorchromosome CDS2431618 411 + 0.287105
NA SSP0115 similar to ica operon transcriptional regulator IcaRchromosome CDS134063 507 - 0.274162
NA SSP2019 transcription repressor of fructose operonchromosome CDS2087886 759 - 0.355731
NA SSP0839 accessory gene regulator Achromosome CDS872259 717 - 0.312413
NA SSP0312 putative transcriptional regulatorchromosome CDS340000 555 - 0.306306
NA SSP0813 truncated RNA polymerase sigma-B factorchromosome CDS837507 222 + 0.355856
NA SSP1501 conserved hypothetical proteinchromosome CDS1556222 285 - 0.326316
NA SSP1062 conserved hypothetical proteinchromosome CDS1100769 1293 + 0.331787
NA SSP2055 hypothetical proteinchromosome CDS2120566 273 - 0.282051
NA SSP1496 truncated hypothetical proteinchromosome CDS1551241 180 + 0.316667
NA SSP1258 putative transcriptional regulatorchromosome CDS1300459 549 + 0.338798
NA SSP0646 hypothetical proteinchromosome CDS680576 351 + 0.262108
NA SSP1327 predicted transcriptional regulatorchromosome CDS1372152 549 - 0.295082
NA SSP2412 putative transcriptional regulatorchromosome CDS2476987 849 - 0.349823
NA SSP2285 putative transcription activator of glutamate synthase operonchromosome CDS2370045 888 + 0.318694
NA SSP2339 hypothetical proteinchromosome CDS2420099 264 + 0.306818
NA SSP2222 putative RNA polymerase sigma factorchromosome CDS2282697 576 - 0.307292
NA SSP1289 putative ATP-dependent DNA helicasechromosome CDS1331694 2703 + 0.303737
NA SSP0636 putative transcriptional regulatorchromosome CDS673076 567 - 0.345679
NA SSP1543 ATP-dependent DNA helicasechromosome CDS1608416 2046 - 0.346041
NA SSP1396 putative transcriptional repressor of ribose operonchromosome CDS1438710 966 - 0.322981
NA SSP0463 two-component response regulatorchromosome CDS499170 765 - 0.330719
NA SSP2310 truncated transcriptional regulatorchromosome CDS2393801 534 - 0.308989
NA SSP2253 transcription-repair coupling factorchromosome CDS2327349 3513 - 0.347282
NA SSP0856 putative transcriptional regulatorchromosome CDS886991 381 + 0.312336
NA SSP2130 transcriptional regulatorchromosome CDS2196318 459 - 0.294118
NA SSP2056 putative transcriptional regulatorchromosome CDS2120974 2187 - 0.285322