Gene list
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COG category: Transcription
Organism: Synechococcus elongatus PCC 6301, PCC6301
Number of genes found: 102
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Synechococcus elongatus PCC 6301, PCC6301 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | syc2096_d | penicillin-binding protein | chromosome | CDS | 2246850 | 2223 | + | 0.595592 |
NA | syc0869_d | carboxyl-terminal protease | chromosome | CDS | 965512 | 1506 | + | 0.602258 |
NA | syc0581_c | Cell envelope-related transcriptional attenuator | chromosome | CDS | 650856 | 1014 | - | 0.579882 |
NA | syc2358_d | hypothetical protein | chromosome | CDS | 2512831 | 645 | + | 0.584496 |
NA | syc0799_c | hypothetical protein | chromosome | CDS | 893180 | 210 | - | 0.57619 |
NA | syc2172_d | hypothetical protein | chromosome | CDS | 2317881 | 501 | + | 0.580838 |
NA | syc0104_c | two-component response regulator for energy transfer from phycobilisomes to photosystems | chromosome | CDS | 113664 | 657 | - | 0.579909 |
NA | syc0604_c | transcriptional regulator | chromosome | CDS | 676266 | 327 | - | 0.574924 |
NA | syc0709_d | hypothetical protein | chromosome | CDS | 794863 | 657 | + | 0.550989 |
NA | syc0259_c | serine/threonine kinase | chromosome | CDS | 300498 | 1686 | - | 0.568209 |
NA | syc2338_d | hypothetical protein | chromosome | CDS | 2494696 | 465 | + | 0.617204 |
NA | syc0924_d | transcriptional regulator | chromosome | CDS | 1032473 | 603 | + | 0.573798 |
NA | syc0179_c | GTP pyrophosphokinase | chromosome | CDS | 200921 | 2295 | - | 0.534641 |
NA | syc0923_d | similar to serine/threonine kinase | chromosome | CDS | 1030817 | 1533 | + | 0.567515 |
NA | syc2380_c | hypothetical protein | chromosome | CDS | 2536203 | 573 | - | 0.612565 |
NA | syc1525_d | hypothetical protein | chromosome | CDS | 1646558 | 516 | + | 0.534884 |
NA | syc0806_c | putative helicase | chromosome | CDS | 900796 | 1410 | - | 0.605674 |
NA | syc1638_c | two-component system response regulator | chromosome | CDS | 1769228 | 621 | - | 0.58132 |
NA | syc2137_d | hypothetical protein | chromosome | CDS | 2286904 | 372 | + | 0.580645 |
NA | syc0438_d | serine/threonine kinase | chromosome | CDS | 491357 | 1584 | + | 0.584596 |
NA | syc2074_d | hypothetical protein | chromosome | CDS | 2226649 | 294 | + | 0.608844 |
NA | syc1728_c | hypothetical protein | chromosome | CDS | 1871860 | 855 | - | 0.596491 |
NA | syc0835_d | hypothetical protein | chromosome | CDS | 932030 | 507 | + | 0.540434 |
NA | syc1091_d | hypothetical protein | chromosome | CDS | 1204794 | 552 | + | 0.565217 |
NA | syc0775_c | unknown protein | chromosome | CDS | 866917 | 531 | - | 0.33145 |
NA | syc2285_d | hypothetical protein | chromosome | CDS | 2440092 | 744 | + | 0.55914 |
NA | syc2291_d | hypothetical protein | chromosome | CDS | 2443906 | 1623 | + | 0.566851 |
NA | syc0151_d | two-component response regulator | chromosome | CDS | 164716 | 690 | + | 0.588406 |
NA | syc1058_d | putative acetyltransferase | chromosome | CDS | 1172102 | 474 | + | 0.548523 |
NA | syc1977_d | hypothetical protein | chromosome | CDS | 2119902 | 855 | + | 0.561404 |
NA | syc0227_c | transcription-repair coupling factor | chromosome | CDS | 260107 | 3462 | - | 0.585789 |
NA | syc1631_c | hypothetical protein | chromosome | CDS | 1760393 | 1389 | - | 0.586753 |
NA | syc0602_d | unknown protein | chromosome | CDS | 675167 | 351 | + | 0.549858 |
NA | syc0629_d | putative acetyltransferase | chromosome | CDS | 699027 | 495 | + | 0.59798 |
NA | syc0744_d | hypothetical protein | chromosome | CDS | 831609 | 669 | + | 0.499253 |
NA | syc0243_c | ndhF3 operon transcriptional regulator | chromosome | CDS | 282753 | 972 | - | 0.539095 |
NA | syc2221_c | two-component response regulator | chromosome | CDS | 2370973 | 681 | - | 0.453745 |
NA | syc1120_c | hypothetical protein | chromosome | CDS | 1231262 | 1125 | - | 0.564444 |
NA | syc0520_d | similar to fibronectin binding protein | chromosome | CDS | 579079 | 1755 | + | 0.578917 |
NA | syc0194_c | probable transcription regulator | chromosome | CDS | 219748 | 1311 | - | 0.568268 |
NA | syc2366_c | hypothetical protein | chromosome | CDS | 2517983 | 1452 | - | 0.512397 |
NA | syc0841_c | transcriptional regulator | chromosome | CDS | 936811 | 339 | - | 0.589971 |
NA | syc1834_d | transcriptional regulator | chromosome | CDS | 1984099 | 276 | + | 0.583333 |
NA | syc0703_d | hypothetical protein | chromosome | CDS | 788038 | 651 | + | 0.569892 |
NA | syc0666_d | putative SNF2 helicase | chromosome | CDS | 743416 | 3060 | + | 0.569935 |
NA | syc2392_c | hypothetical protein | chromosome | CDS | 2551622 | 342 | - | 0.55848 |
NA | syc0160_c | unknown protein | chromosome | CDS | 175074 | 420 | - | 0.540476 |
NA | syc1550_c | hypothetical protein | chromosome | CDS | 1677750 | 561 | - | 0.56328 |
NA | syc1282_d | putative acetyltransferase | chromosome | CDS | 1392954 | 525 | + | 0.565714 |
NA | syc2175_d | unknown protein | chromosome | CDS | 2321711 | 762 | + | 0.566929 |
NA | syc0757_d | serine/threonine kinase | chromosome | CDS | 846910 | 1374 | + | 0.558952 |
NA | syc1414_c | transcription factor | chromosome | CDS | 1531164 | 984 | - | 0.563008 |
NA | syc0743_d | similar to chloroplast membrane-associated 30 kD protein | chromosome | CDS | 830637 | 774 | + | 0.565891 |
NA | syc0772_d | transcriptional regulator | chromosome | CDS | 863481 | 399 | + | 0.493734 |
NA | syc0771_d | unknown protein | chromosome | CDS | 863273 | 240 | + | 0.5 |
NA | syc2513_d | nitrogen assimilation regulatory protein | chromosome | CDS | 2683467 | 2517 | + | 0.572507 |
NA | syc0878_d | hypothetical protein | chromosome | CDS | 976212 | 486 | + | 0.557613 |
NA | syc2056_d | transcription regulator | chromosome | CDS | 2208970 | 693 | + | 0.463203 |
NA | syc0391_d | transcriptional regulator | chromosome | CDS | 427513 | 501 | + | 0.566866 |
NA | syc2452_d | hypothetical protein | chromosome | CDS | 2616218 | 456 | + | 0.486842 |
NA | syc0005_d | putative ribonuclease II | chromosome | CDS | 2459 | 1398 | + | 0.567239 |
NA | syc0428_d | serine/threonine kinase | chromosome | CDS | 480181 | 2160 | + | 0.593056 |
hrcA | syc0908_c | heat-inducible transcriptional repressor | chromosome | CDS | 1013573 | 1062 | - | 0.588512 |
hypB | syc1558_d | hydrogenase isoenzymes formation protein HypB | chromosome | CDS | 1683924 | 729 | + | 0.580247 |
lrrA | syc1688_d | transcriptional regulator | chromosome | CDS | 1825510 | 885 | + | 0.59209 |
nblR | syc1796_c | two-component response regulator | chromosome | CDS | 1943027 | 687 | - | 0.500728 |
ntcB | syc0308_c | nitrate assimilation transcriptional activator | chromosome | CDS | 353747 | 930 | - | 0.563441 |
nusA | syc2073_d | N utilization substance protein A | chromosome | CDS | 2225327 | 1326 | + | 0.566365 |
nusB | syc1633_c | N utilization substance protein B | chromosome | CDS | 1763532 | 642 | - | 0.58567 |
nusG | syc0890_d | transcription antitermination protein NusG | chromosome | CDS | 993944 | 630 | + | 0.544444 |
pex | syc0852_d | circadian period extender gene | chromosome | CDS | 948343 | 447 | + | 0.550336 |
rbcR | syc2116_c | LysR family transcriptional regulator | chromosome | CDS | 2265136 | 990 | - | 0.572727 |
recG | syc0470_c | ATP-dependent DNA helicase RecG | chromosome | CDS | 529653 | 2454 | - | 0.568052 |
rnb | syc0425_c | ribonuclease II | chromosome | CDS | 477504 | 2013 | - | 0.582216 |
rnc | syc2441_c | ribonuclease III | chromosome | CDS | 2602974 | 744 | - | 0.579301 |
rpaA | syc1409_d | two-component response regulator for energy transfer from phycobilisomes to photosystems | chromosome | CDS | 1527543 | 750 | + | 0.574667 |
rpoA | syc1888_d | RNA polymerase alpha subunit | chromosome | CDS | 2029294 | 930 | + | 0.576344 |
rpoB | syc2507_d | RNA polymerase beta subunit | chromosome | CDS | 2670954 | 3303 | + | 0.574932 |
rpoC1 | syc2508_d | RNA polymerase gamma-subunit | chromosome | CDS | 2674375 | 1875 | + | 0.553067 |
rpoC2 | syc2509_d | RNA polymerase beta prime subunit | chromosome | CDS | 2676319 | 3957 | + | 0.57392 |
rpoD1 | syc0879_d | principal RNA polymerase sigma factor RpoD1 | chromosome | CDS | 976905 | 1200 | + | 0.559167 |
rpoD2 | syc2345_d | group2 RNA polymerase sigma factor RpoD2 | chromosome | CDS | 2499488 | 963 | + | 0.542056 |
rpoD3 | syc0857_c | group2 RNA polymerase sigma factor RpoD3 | chromosome | CDS | 953022 | 981 | - | 0.550459 |
rpoD4 | syc0953_d | group2 RNA polymerase sigma factor RpoD4 | chromosome | CDS | 1069226 | 936 | + | 0.527778 |
rpoD5 | syc2245_c | group2 RNA polymerase sigma factor RpoD5 | chromosome | CDS | 2399234 | 1197 | - | 0.52548 |
rpoD6 | syc0015_c | group2 RNA polymerase sigma factor RpoD6 | chromosome | CDS | 14434 | 951 | - | 0.559411 |
rpoZ | syc2381_c | RNA polymerase subunit omega (rpoZ) | chromosome | CDS | 2536772 | 231 | - | 0.519481 |
sigF1 | syc2495_c | group3 RNA polymerase sigma factor SigF1 | chromosome | CDS | 2657624 | 780 | - | 0.560256 |
sigF2 | syc2309_c | group3 RNA polymerase sigma factor SigF2 | chromosome | CDS | 2463740 | 828 | - | 0.543478 |
sigG | syc2171_d | group3 RNA polymerase ECF-type sigma factor SigG | chromosome | CDS | 2317141 | 657 | + | 0.578387 |
sigI | syc2091_c | group3 RNA polymerase ECF-type sigma factor SigI | chromosome | CDS | 2243412 | 591 | - | 0.549915 |
sphR | syc0533_d | phosphate sensor two-component response regulator | chromosome | CDS | 596063 | 774 | + | 0.564599 |
srrA | syc1690_d | two-component response regulator for energy transfer from phycobilisomes to photosystems | chromosome | CDS | 1827820 | 768 | + | 0.579427 |
srrB | syc0965_d | two-component response regulator | chromosome | CDS | 1081660 | 714 | + | 0.542017 |
tenA | syc0455_d | transcriptional activator TenA | chromosome | CDS | 508268 | 618 | + | 0.563107 |
umuD | syc0007_d | DNA polymerase V | chromosome | CDS | 7099 | 561 | + | 0.554367 |
xylR | syc1981_c | xylose repressor | chromosome | CDS | 2124098 | 909 | - | 0.614962 |
ycf29 | syc2234_d | two-component response regulator | chromosome | CDS | 2385868 | 708 | + | 0.543785 |
ycf52 | syc1858_c | hypothetical protein YCF52 | chromosome | CDS | 2010538 | 531 | - | 0.570621 |
ycf52 | syc0763_d | hypothetical protein YCF52 | chromosome | CDS | 854644 | 633 | + | 0.551343 |
zam | syc2184_d | protein conferring resistance to acetazolamide Zam | chromosome | CDS | 2328427 | 2247 | + | 0.574099 |
ziaR | syc0262_c | zinc-responsive repressor ZiaR | chromosome | CDS | 306874 | 369 | - | 0.552846 |