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2024-05-18 06:45:03

Gene list

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COG category: Transcription
Organism: Onion yellows phytoplasma OY-M, onion yellows

Number of genes found: 36

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Onion yellows phytoplasma OY-M, onion yellows
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PAM424 hypothetical protein chromosome CDS470351 699 + 0.264664
NA PAM149 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS176111 258 + 0.25969
NA PAM566 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS640299 237 - 0.270042
NA PAM503 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS577774 201 + 0.258706
NA PAM397 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS442897 396 - 0.270202
NA PAM412 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS458035 318 - 0.220126
NA PAM321 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS368215 495 + 0.264646
NA PAM361 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS409108 495 + 0.264646
cspC PAM671 cold shock proteinSubName: Full=Cold shock protein; chromosome CDS769504 225 + 0.368889
fliA PAM360 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS408337 630 - 0.255556
fliA PAM427 DNA-directed RNA polymerase specialized sigma subunit chromosome CDS473533 669 + 0.249626
fliA PAM323 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS369487 621 + 0.238325
fliA PAM422 DNA-directed RNA polymerase specialized sigma subunit chromosome CDS468874 648 - 0.248457
fliA PAM511 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS585219 606 + 0.262376
fliA PAM320 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS367444 630 - 0.253968
fliA PAM700 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS799001 687 - 0.273654
fliA PAM363 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS410380 621 + 0.238325
fliA PAM040 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS52707 606 + 0.260726
fliA PAM536 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS610477 687 - 0.273654
fliA PAM656 DNA-directed RNA polymerase specialized sigma subunitSubName: Full=DNA-directed RNA polymerase specialized sigma; chromosome CDS749933 603 - 0.247098
greA PAM302 transcription elongation factorRecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS345470 513 - 0.304094
hrcA PAM706 heat-inducible transcription repressorRecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS805694 1029 - 0.279883
nusA PAM148 transcription terminatorSubName: Full=Transcription terminator; chromosome CDS175032 1074 + 0.319367
nusB PAM443 transcription termination factorSubName: Full=Transcription termination factor; chromosome CDS491859 450 + 0.244444
nusG PAM255 transcription antiterminatorRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS290859 615 + 0.338211
rnc PAM608 dsRNA-specific ribonucleaseRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS694541 717 + 0.348675
rpoA PAM227 DNA-directed RNA polymerase alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS256169 744 + 0.334677
rpoB PAM260 DNA-directed RNA polymerase beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS294025 3822 + 0.359498
rpoC PAM261 DNA-directed RNA polymerase beta' subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS297849 4062 + 0.354505
rpoD PAM628 DNA-directed RNA polymerase sigma subunitRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS719935 1383 + 0.348518
rpoD PAM702 DNA-directed RNA polymerase sigma subunitSubName: Full=DNA-directed RNA polymerase sigma subunit; chromosome CDS800136 627 - 0.251994
rpoD PAM408 DNA-directed RNA polymerase sigma subunitSubName: Full=DNA-directed RNA polymerase sigma subunit; chromosome CDS453299 600 + 0.26
rpoZ PAM736 DNA-directed RNA polymerase subunit K/omegaSubName: Full=DNA-directed RNA polymerase subunit K/omega; chromosome CDS839433 198 - 0.292929
spoT PAM126 guanosine polyphosphate pyrophosphohydrolase/synthetaseSubName: Full=Guanosine polyphosphate pyrophosphohydrolase/synthetase; chromosome CDS148452 2391 + 0.291928
srmB PAM453 superfamily II DNA and RNA helicaseSubName: Full=Superfamily II DNA and RNA helicase; chromosome CDS509237 1074 + 0.285847
srmB PAM714 superfamily II DNA and RNA helicaseSubName: Full=Superfamily II DNA and RNA helicase; chromosome CDS814483 1659 + 0.303195