Gene list
Applied filters:
COG category: Transcription
Organism: Nitrosomonas europaea ATCC 19718, ATCC 19718
Number of genes found: 121
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# Nitrosomonas europaea ATCC 19718, ATCC 19718 >NE1096 Sigma factor, ECF subfamily ATGCCTCCGCCCGATATCCACTGCAAACAGGTAGAAACCCTTTACAGCGA CCATCACCGATGGCTGCGCGGGTGGTTATGCAAAAAGCTGGGCTGCAGTG AACAGGCGGCTGATCTCGTGCATGATACTTTTCTGCGTATCCTGAATTCC GGAGAGGTGCTGACAGGGCTGACTAAACCGCGTGCCTACCTGACGACTAC CGCAAAACGATTGCTGATCGATCGTGCCCGTCATCGACGGGTCGAGCAGT CCTATCTGGATGAACTTGCGCTGATGACGGCCACGATGGAAGGTGCACCC TCACCGGAAGCCATTCTGATGGCACTGGAAGCACTGAAACAACTCAGTGA TGCTCTGCAAAGCTTGCCGGCAAATGCCAGTGAAGCTTTTCTGCAACATT ATCTCCTCGATGAAACCCAGCCGGCCATTGCTGCCAGGCTCGGTGTTTCA GTGCGCATGGTGCAGAAATATCTGGCACAGGCACTGCTGTGCTGCCACCG GGCGCTCACCGATTAA >NE1409 possible phoP; Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain ATGCGCATCCTGGTCATCGAAGATGAATTTCGTCTGCAAAATCAGATCCG CCGGCAGTTGGAGGCAGCGGGTTATATGGTCGATACCAGCAGCAGTGGCG ATGAAGGGTTGTTTCTCGCCACGGAATACCGGCCCGATGCTGCCATCATC GATATTGGCCTGCCCGGTAAATCCGGCCTGGAAATCATCAAGGCACTGCG GGAACGCGGCAGCCTGCTGCCTATCCTGATTCTGACTGCGCGCAGCAGCT GGCAGGACAAGGTGCAGGGACTGGAAATGGGCGCGGATGATTACCTGACC AAGCCGTTTCAGATGGAAGAGCTGCAGGCCAGAGTCCGGGCATTATTGCG CCGTGCTGTCGGTATACCGCAAACCTTGCTGAAGTGTGGCCCCATCGCGG TGGATGTCACAGCACAATCGGTCAGTGTCGATGGTGCGAACATCGAACTG ACATCGTTTGAATATCGCCTGCTGGAAGAACTGGTGTGCCACCGTGGCGA GATACTTTCCAAGGAGTCACTTGCTGATGCCCTGTATCCGCACAATGAGG ATCGTGACAGCAACGTGCTCGAAGTCATGATCGGTAGGTTGCGGCGCAAA CTCGACCCGGAGGGTACATTGAAGCCGATCGAAACCATGCGCGGGCGCGG CTATCGTTTTACGCTGGAATGTAACAGCAAATCGCCATGA >NE1101 Sigma factor, ECF subfamily GTGTCAGCCGATGAATTCATACTGCAGCAGAAAGTTCATGCCTTGTACAG CAACCACCGTAGCTGGTTACAGAGGTGGTTGTACCGCAAGCTGGGCAATG CCTGCGATGCTGCCGATCTGGTGCAAGACACATTCATCAGCGTGATCACT GGAGGCTACGCGGATGACATTCGCGAGCCGAAACCTTTCCTCGCCACGAT CGCCGGCCGGCTGGTTGCCCACCGGTGGCGCCGCAATCAGCTCGAAACGG CCTACCTCGAAGCCCTGGCAGCACTGCCTGTAGAGTTGATGCCTTCGCCC GAAGCACATGTGCTGGCGCTGGAAGCCTTACTGGAAATCGATCGTGCGCT CGATGGCCTGCCGACCCGTGTCAAGGAAGCCTTTCTGCTCGCCCATCTGG AAGAACTCTCGTATGCACAGATCGCGGAACGGCTCAACGTATCGACCAGT TCGGTCAAGCAATACCTCACACGTGCCAACCGGCAGTGCCTGTTTGCTCT GTCAGTCTGA >NE1580 Helix-turn-helix protein, CopG family ATGAGTCAGACCAAAGTAGCTATCACAATCGAAGAAGAGGTGCTTGCCAG AGTGGATGCGCTGGTGAGGCAGCGTGTATTTGCTAACCGCAGCCGTGCGA TCCAGGAGGCTGTGCAGGAAAAGCTGGAGCGCATGGATCGTAGCCGTCTG GCCGAGGAATGCGCAAAACTTGATCCTGCCTTTGAAAAGGCAATGGCAGA CGAAGGTTTGTCTGAGGAGCTGGTTGCGTGGCCAAAATATTGA >NE1217 putative sigma-70 factor, ECF subfamily ATGTGCTCAACCGATTCCTCCAAGGATATCGTACCGACTGCCGATTCTGC GATGCAGCAGGTTTATTTCCTGTACAGCGATCATCATGACTGGCTGTACA GCTGGTTACGCCACCGGTTGGGTAACGCTGCTGACGCAGCCGATCTGGCA CATGATGCTTTTCTGCGCCTTATTATCAAACCGGCTCCTCGCGGTTTTGC CAATTTTGGTGAAGCACGCGCCTACCTGCGTACCATGGCTCAGGGCATGT GCATCAACCTGTGGCACCGCCGTGAAATCGAACGAGCCTGGCTGGATACC CTGGCTGCATGGCCGGAGGCCCTCGCCCCTTCTCCCGAGCGACAAGTCAT GGTATTGGAAGCGCTGCATGAAATCGGCACTATGCTGCTCGATCTTCCGC CTAAAGCTGCCCGAGCTTTCCTCATGGCTGCAGCTTGCCAGATGACGGAC AAGGAAGTGGCTGAAGCACTTGGCGTTTCATCTCGCATGGTACGCAAGTA TGGATTCCCTTGA >NE0787 hypothetical protein ATGGACCATGATAAATCCAAGCGCTTACCTCCGTCGTATTACACTTTACT TGAGGCCAGCCAGGAAAAGGAAACAACCAGTACAAAAATTCTTGCACAAT ACCTCGATCGATCCCCTGCAACCGTTCGGACTCAGTTTCAGAGGATTATG GAGTTTCTTGATGTCAGCAGCAGGTACGGAGCATTACGCGAAGCTGAAAA GCGGGGTCTGATCAGGCGGAATAAGCGCGCTACTTCTGCTCACCATCAAG AGAATAGAAGCTCACTGTAA >NE2544 Helix-turn-helix motif ATGTACGCAGCCTATCAGACCAATGGTCCAGCAAGACCCATAGCCCGAAC TGCCGCATTTACGAAAGAAGATGATCTTCTTGTGGACATGGCGCGGCAGA ATAATCTTCGAGGGCGCATCTTGACCTATTGCGTAGCTGGTACGTTTGGA TTGCTGTCGCCGAACTATTTGCACGCTAGCGCGGCTACTGCAAATTGGGA CATCAACCAGATCGAGATCAGCGGACTGAGCGAGAGCTCGGTAGGCGCCA TCAGCGAATCTGCTCGAGACATCGCACACATTCGTGCGGTCACGAAGATC TCAGTTTCCGAGCTTTCCAGGGTATTTGGCGTATCGCGACAAGCAGTACA TGAGTGGATTAAGGGAGGCACTCTTTCGCAGCGAAACGCACAACGTCTTT CAGAGCTGGCACGAGCGACTGACGTATTCATTGAAGCTGAGATCGAGGCA TCCCCTCAAGTTTTCCGCAGAAAGATTGCTGGTGGCCAGTCCATTTTGGA CGCCGTCAGAGAAAACGGAAATGCCGTGGAGTTGGCAAAAACGCTCGCCG CCACTCTGGTCAGGGAATCCCAGCAACGCCAGCGCCTCGCTGCACGTCTA GCGGGAAGATCTGCGACTCCCGGTACTTCCACAGAATTTGGTTCTCCTCA CCTTGATGAAGATGCGTGA >NE0533 putative sigma-70 factor, ECF subfamily ATGTGTGCTGATTGTTTCAGATTCTATTTCTCAAAGGCCATTTCCATGCA GGAATCCTCTGCCGCCGATACGGGGACGGCGGTCATCGATGCGTTGTATC GCGAACATCATCGCTGGTTGCTTATGTGGCTCAGAAAAAAACTGGGTTGT CCGCAGAATGCTGCCGATCTCTCGCACGATACTTTCGTTCGATTGCTCTC GTTGCAGGAAATGCCTGTACTGCGAGAACCGCGTGCCTACCTGCTGGTAA CGGCCAATCGGCTGATGATCAACCTCAACCGGAAGCATAAAGTCGAGGCG GAAACCCTGCACAGCATTGCTGCACTGCTTTCAGAACGCACAGAGCAGGA TGTCGCTCATGTTGCTGCAGTACGTCAACTGCTCGAAGCGACCGTGCTGA TGCTGATCGATGGACTGGATGAGCGATCACGCCAGGCTTTCCTGCTGGCG CGCGTCGAGGATATGACCTATGCGGAAATTGCTGAAACGATGCAAGTCTC GATCAGTCGGGTCAAGCAATATCTCGTCAAAGCACTCGCCTACTGCCATG TTCACCTGCATCAGCTCAAGGAAGATGTATGTCTGAAGTAA >NE0118 hypothetical protein ATGAATTCAGCAATTTTGTCACAAGATGGTCGCGTGGTAATCCCCAAAAA ATTCCGTAACAAACTGGAGATTAAAGAGGGGGATGAGGTTATCTGGAAGG AAGAGGACGAACAAATCATTCTCACCTCACGTCGGCAGGAACTTGAGCGT GCCGAACGTTTTTTTGGGCAAATGATGGCTGATTATGCCGGTGATTCTCT GGCAGATGAGTTGATCGCGGAGCGGCGAGCTGGAGCAATTTATGAGCACA CATCACATGGCTGA >NE0554 Sigma factor, ECF subfamily GTGCGACATTATGTCGCATTTCAAACAGTTTTTCTGTCCCGCATAATTCC CCTGCATCGGGCATATAGCCGCACATCGCCACTATCTACCATGAATCCCA GCGTAATTCTTGCCAACCTTTACCTGCGCCATTTCAGCGAGTTACGTGCT TTCCTGTTCAGGCATACGGGTTGCAGAGAAATTGCGGCAGAGCTGACCCA GGAAACCTTTATCCGCATTATGGGTTACCAGACTGATACATCGATACAGA ACGCGCGTGCCTTGCTGTACCGTATCGCGGGTAATCTGGCGATCGATCAC CATCGTACCTGTGTGAAATTTCCAGAAAGCGTTTCTATCGATGATCTTCC GCAACATGAACTGCCCGCGACTGAATTGACCGACCCCGCTCGGCTGGTAG CTGCACGCCAGCTACTGGAAAAACTGTGTATCGCGATTGATGCACTACCG CCACAATGTCATCGTGCTTTCGTACTGCATAAATTTGACGGTTACTCACA TGCGGAAATCGCCGAAAAACTGGGAATCACCCGCAATGCCGTCGAAAAAC TGTTGATTCGCGCACTCATCCGGTTACGCCAGGTGCTTGTGTAA >NE0318 conserved hypothetical protein ATGAATCCGAACATTAGAGTGTGGTTTTCGGCTGATGAGCTGGCAAAGTT GTCACCGCATCTCGTCACACGAATTCCGGTTTCACCACGTCAGTGCAGGG AACGGGCAAAACGTGAAAAATGGTTATCCAGAGAAGTTGCTGGTAAAGGT GGGCCGCGTGGCAAGAAAACAGAATTTCTTCCACCCGAGAATATCCTGTC TGAAATTCACCAGTTTCTGAGCAGGAATCCGGATTTCTTCGCTGAGGCAG GAAGTTCACCTGAGAACGCAACTCAACCCGGAATGTATCAGGCAAGGCAG CCGATGAGCAGAAACGGGAAATATGGGCAATCCATAGTTGGAAACCATAC TGATCTGGAAAATTCAGAGGTTGTTTATGTAGCTCACACAGAGTTATGTG ATACGCCAGGTGAGGTTACCGAGATGATTCCTGATGATCAAATGATCCTC AGTATCGCTGTCAATCCGGCTGATTGGAGGCGATATGCCGGATTAAATCC GGAGCATATCAAAATCATCGATGTACAGGGAGATGGAATGAAGCCCACTT TGCAGCATGGTGATCAGGTGCTGGTAGACACTGCCTGCAATCGATTCGTG GATGATGCAATTTATGCAATTCGGCAGGGTGATATGTTACGGATAAAACG TATCAGGCTCAGACTGGATGGCTCGATAGAGATCAGGAGCGATAACAGTC ATAATTTTGGTATAGAAACGTACAGTCAGAAAGAAGCTGCAGCATTCAAC GTGTTCGGAAAAATTCTGCCGTTCAAGTTTGGAAAATTTGATCTGTAG >NE0729 possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain ATGAATCCTTCTTTTCAAGCCCGTATTCTCATCCTCGAGGATAATGCCAG CCTCGTTGCCAACCTTTTTGCCTACCTGGAACCGCGGGGATACCTGCTGG ATGCAGCCCAGGATGGTCTTGCTGGTCTTACGCTTGCACAGCAGGGGAAT TACCATGCGCTGATCATCGATTGGGGGCTGCCAACGAAGGAAGGAGTAGA TGTCATCCGCGCTCTGCGTGCACGGGACTGCCATATACCCATCCTCATGC TGACCGCTCGCGACGATCTCGATGACAAAATTTCCGGATTCAGAGCAGGT GCGGATGACTACCTGATTAAACCATTCGCGTTCGCAGAGCTTGAGGTGCG TATCGAAGCGCTGCTTGCCCGAAGTCGTGGCAGAAGGCGCAAGCTCACTG TGGGCGACCTTTCATTCGATCTGGATACTCAGCATATATGGCGCGGATCA CGGCAGATACAACTGTCCGCAAGTGAGCGACGGCTTCTGGAAGTACTGAT GCGCGCAAGCCCGTCAGTCGTTTCTCGTCCTGAACTCGAAGAAACGCTTT GGGGTGACGAGCCACCGGAAGGCAATGTGCTCCGCTCACATATGTATGAA CTCCGGCGAGCTGTGGACGGAGAGCAGGAAGAAAAACTGCTGCACACACT TCGATGTGTCGGCTATCGCCTTGCTGTGCAGGAGCAAAACTGA >NE1086 probable sigma-70 factor, ECF subfamily GTGACGATCCAGAATCCGGAAAATTCCCTTGCTTCCTGCAGTATCGAGTC GCTCTATTGCCATCATCACAAATGGCTGGTGGGGTGGTTGCGTCGCAGGC TGAGCAATGCTCTGCAGGCTCCGGATCTGGCGCATGATATTTTTTTGCGG ATTCTGAGCAAGGATTCACTCCCTGTCATTCATGAGCCACGTGCGCTGCT CACTACGATCGCACAGGGTATCGTAGCCAATTTCCATCGTCATCAGCGCA TCGAACAGGCATATCTCGATGCACTGGCACAGATACCGGAGTCATTGGCG CCGTCACCCGAGGCTCAGGCCATCATGCTGGAAACACTGGTGGAAATCGA TGCGCTGCTGGATGGTATGCCGCCTCTGGTACGCAAGGTTTTTCTGTTGT CACAGATCGATGGCCTGCGTCAGAGCGAGATCGCTCAGCGTTGCGGTATT TCTGTTCCCACTGTCAAGCGTTATGTAGCAAAAGCGCTGGAACAATGCTG CTTTATCGGATGA >NE1617 Sigma factor, ECF subfamily ATGCACTCGCGTGATCACCAGGAGGATGTCGCACCAGCCGCCAACCCTGC AATGCAGCAGGTTCACTTTCTCTACAGCGATCATCATAACTGGCTGTACG GCTGGTTGCGCTTTCGCCTGGGCGATGCGGCCGACCTGGCGCACGATACC TTCGTGCGCCTGATTGCCCGCCCCCGGTGCTTCGACAGCAGCCAGGAAGC CCGCGCCTACCTGCGAACCATCGCCAACGGCCTGTGCATCGACCTGTGGC GCCACCGCGAGATCGAACGTGCCTGGCTGGAGACCCTGGCTACACAACCC GAGGCGTACGCGCCCTCGGCCGAGGAACAGACAGCGGTACTGCAGGCGCT GCACGAAATCGATGGCATGCTGCGCCATCTGCCGCTCAAAGCCGCTCGGG CTTTCGTCCTGGCGATGGCCTGCGGCATGACGCACCAGGAAGTCGCGCGT GAGCTGGGCGTGTCCTCGCGCATGGTCGGACACTACATCACCCGAGCCAT GCTCCATTGTATGCAGCTCGAAGCACGCAATCTGGGCCAGGCCGGCGCCA TTGCTCCATGA >NE2519 conserved hypothetical protein ATGTCGAACGAACAGCTTGCAGATCTAACCCAGCCACAACGCGACCGGCT CGCGTTTGTGGAGTTGCGCGTGCGCTTCATCGGGGAGATACGCCGTCAGG ACTTGGTTACGCGGTTTGGCATCCAGTCCGCCGCCGCATCCAGGGATCTG GCGCTGTACAAAGAGTTGGCCCCGGGCAACATCGATTACGACTCCAAGGG CAAGTCCTACGTCCTGGGGCCGGACTTCCGGCCCGTCTTCGACTTCCCCC CGGAGCGGGTGCTGTCGTGGCTAACCCAGGGCTTTGGCGATGGCGAGCCG ATGCGGCTCAAGGCGTGGGTGGCCAGCGAGAGCCCGTCACGGCTCACGCA TCCGGATCTGGATGTGCTTGCGAGCGTGACCCGTGCGATTCACCAGGAGT GTCCGCTCGGCATCGAGTACCACTCCATCTCCAGTGGCCGCACCGAGCGG GAAATCGTCCCGTTTGCGCTGATCGACAACGGCCTGCGCTGGCATGTGCG CGCCTTCGACCGGAAGTCCCAAGAGTTCCGAGATTTCGTCATCACTCGGA TCAAGCGCCCGGTCCTTATAAGGGATGCAGAGGTGCAGTCCCATGAGCGC AGTGATCAGGACATCCAATGGACCCGGATCGTGGAGCTGGAGATGGTGCC GCACCCGGACCAGCCCCGTCCTGAAATTACGGAGATGGACTACGGCATGG TTCGCGGGTCACTGCGGATGAAGCTGCGTGCTGCCACCGCCGGATACATC TTGCGGCAGTGGAGCGTGGACTGCTCTCCGGACCACAGTCTGCGCGGTTA CGAATTCAGGCTCTGGCTGAAAGATCACCTGGCGCTGTACGGCGTCAAGA ACGCTGTGTTGGCGCCGGGCTACCGCTCGCCTGACCAAAATAAGGGAGAG CAATAA >NE0951 Bacterial regulatory proteins, MerR family GTGGAGAATCAGGCACAAATTAATGTATTGCCTCCCATACCGGTAAAGAG ATATTTCACAATCGGAGAGGTGAGTGAATTATGTGGCGTTAAGCCACATG TTTTGCGTTACTGGGAGCAGGAGTTTACCCAACTGAGATCAATCAGGCGT CATGGAAACCGGCGTTACTATCAGCACCAGGAGGTAATACTCATCAGACG GATACGTGAGTTATTGTACGACTATGGTTTTACCATAAACGGAGCACGCA ATCACCTGGTATTAGGGTTGCAGAATCAGGTTAAAAATAATGTAGTAGGT GGTCAATCTTGTCAGTCCGGTTCAGATTTCAGTCTGGCCGGATTAAAAAG AGAAATTGAGCAAGTCATATCGTTTCTTCAGGTAAGTGAGTAA >NE2507 AraC type helix-turn-helix:ThiJ/PfpI family ATGAAACTCCACATCCTTGTTTGTGATGGCGTGTTTGATCTGGGGCTTGC GGCGCTCACTGACACAGTGGGCTTGGCCAATGCGATGTCGGGCTCGCTGC CACAGGCTCCCGCGCACATAGAGCTCACGCTGGTGGGCGTGCGGCGTCGC ATCCGAACTGCGCAAGGCTTGACGGTCCCCGTGGTCACTGCGCGTGGTGT GCCGGAACCAGACGTCGTGCTCGTGCCCGCGTTTGGTGACAAGATGCCTG ACACGCTCTCGGCTCGGCTCACACGCCCCGACGTGCCCGATGCGGTCGCC ATGCTACAGCAGTGGTCCACCGCTGGCGCGCACCTTGGTGCCGCCTGCTC CGGTAGTTTCTTGCTTGCAGAGAGTGGCCTGCTTGATGGACATCGTGCGA CGACGTCATGGTGGCTGGGGCCGATGTTTCGGCAGCGCTATCCGAACGTC ACGCTGGACGAGTCACGCATGATCGTGAACTCGACACGCTTCACTACCGC GGGTGCCGCTTTAGCCCACGTCGACTTGGCCTTGCGCATCATCCGGGGGC GCAGTCCAGCGCTGGCGACCCTGGTGGCACGCTATCTGCTGGTCGAGACA CGCAGTTCGCAAGCCGAGTTCGTGATTCCCGACCACCTTGCGCATGCCGA CCCGATGGTGGAGCGCTTCGAGTGCTGGGCCAGACGTCGGCTCGCGAAGG GGTTCTCGCTGGCCGAGGCGGCCAGCGCCGCGGGCACAAGCGAGCGCACC TTGGCGCGGCGGCTGCAAAGCGTTTTGGGCAAGACACCGCTGTCGTATTT CCAGGATCTGCGCGTGGAGCATGCCGTGCATCTCTTGCGCACCGGAAACG CGAGCGTCGACCAAGTCGCCGCACAGGTCGGGTACTCGGATGGGGTGACC CTGCGGGCCCTGTTGCGCCGCAAGCTGGGCCGGAGTGTCAGAGAGTTGCG ACGCGGTGGATGA >NE2478 hypothetical protein ATGTTCATTTTAGAAGGAAATTCGATCGTGAAAATAAATCAGATACCCCC GGGACGCACAGAGACCGTTGCCGGTGGTTCGCAGAAAAAAATGGACAGAG CAAACAGCGCTAAACCGGGTGCAGTTGGCGAAAGCAATAACGTCCATATC AGCTCACTTTCAATGAGCATCCAGTCGCTGGATGCGAGCAGTGAAACGAT GAATACTGCAAAGGTGGCTGAAATCAAACAGGCAATCAGTGAGGGCCGTT TCAAGGTCAATCCGGAAGTGGTTGCAGATCGCCTGCTGGAAACAGTGAAA GAATTGATTCAAAACAAACGATAG >NE1432 DUF193 GTGAGATGTCCGTTCTGCGGTGCTGAGGATACCAGTGTAGTTGATTCGCG AATCAGTGAGGAAGGTGCACGGATCAGGCGCAGACGGCGTTGCGTGGAAT GCGAGAAGCGCTTTACAACCTATGAGACGGTTGAATTGCGTTTCCCGCAG GTCATCAAGCAAGATGGTAATCGTGTGGAATTCAACCGGGAAAAACTCTA CACCAGCTTTGCCCGGGCGTTGCACAAACGCCCGGTTCCAACCGGGCAGG TGGATGCTGCAATCGAGCGCATACTGCAAAAACTGCTGGGAAGCGGGGTG CAGGAAATTTCATCACGCACGATCGGTGAATGGGTCATGCAGGAGCTTTA CAGCCTGGATAAAGTGGCTTACATACGCTTTGCTTCGGTATACAGAAGTT TTGAGGATGTAGGAGATTTTCAGGAAGTCATCAGGGAAGTTCAGTCGTCT CCGCAGAACGGTGATGGCCCATCCTCCTGA >NE0980 putative sigma-70 factor, ECF subfamily ATGTCGACTACGGAAGAGGCTTCTGAGAACGAGATTACCATTCTCTACAC AGACCATCATGGCTGGCTCAAAAGATGGTTATACCGCAAGCTGGGCAATT CATTCGATGCGGCCGATCTGGCGCATGATATCTTCATGCGATTGCTTGCA CGAGAACAATCGACAGTCATTCATCAACCGCGCGCTTTACTGACGACGAT TGCCCAAGGAATCGTTTCGAACTTTTACCGGCGGCGTAAAATCGAAACTG CCTACCTGGAAACGCTTGCTCATCTGCCAGAGGCACAGGCACCCGATCCT GAAATCCGGGTAATCCTGCTGGAAACACTGATTGAAATCGACCGGCGTCT CGACATGCTGGCGCCACTCGTTCGCCGGGCCTTTCTATTGTCACAGGTCG ATGGGATGAAACAAACCGATATCGCCGCTGAACTGAATCTCTCACTGGCC ACAGTGCAGCGCTATATCGTCAAGGCAGTACACCAGTGTTATTTCGGTGA ATGA >NE1355 Cro repressor helix-turn-helix motif:Helix-turn-helix motif ATGAGTAAAAAAACACCTTTAAATGAAATTGCTGAATTTGATGTGTCGGA TTACTTACGTGATGACGAGGATATTGCCGAATATTTAACCCAAGTGCTGG CTGAAGGTGATAGCAATGAATTACTACGCGCTATTGGTTACATTGCAAAA GCACGTGGCATAACTCAGTTGGCTAAGGATACGGGTCTTGGTCGGGAAAG TCTTTATAAAGCCTTTCGTGCAGGCTCAAAACCTCAATTTGAAACAGTAT TTAAAGTGCTGCACGCGCTAAATATTAATTTAAAAGCAATTCCTAAAGAA GTAGTTAGCACACGAGTTTGA >NE0262 conserved hypothetical protein ATGCCGATACAAAAAAATACCAGTGTCACGCTGGGCGAGCATTTTGAGAA GTTTCTTGCACATCAGATTGAAGCCGGGCGCTACGGCTCGGCAAGTGAAG CGATCCGCGCGGGGCTGCGTCTGCTGGAAGAACGCGAGGCCAAGCTGGAA GCATTACGCCGTGCCCTGATCGAGGGCGAGCAAAGCGGCCCGGCTGATTA TTCCCTGCAAAATGTTCTGGATGAGCTGGAAAGTGCAGACTAG >NE1099 Sigma factor, ECF subfamily ATGTCGATCGACGATCCCGCACACCTGAACGCTGTGGATACGCTTTACAG TGATCACCATGACTGGCTGGTAAGGTGGTTGCGCTCCCGTTTGGGATGCG CTCATAACGCCGCTGATCTGGCCCAGGATACCTTCACCCGTATACTGGCT TCACGGGATGCCACGACTGTATGCGAACCACGTGCTTATCTGACTACGAT CGCCAAAAGTCTGATGGTCAACTGGTATCGTCGCCAGGCACTTGAGCGTG CCTATCTGGATGCCCTGGCACATATACCTGAAACGGAAGTACCGGCACCC GAACAGCATCTGATCATTCTCGAAACGTTGCATGAAATAGACCGGATGCT CGATTCGCTTGCTCCCAAAGTCAGACAGGCATTCCTGCTCTCACAGATCG AAGGTTTGAAATACGAAGTGATTGCAGAGCAGCTCGGGGTTTCACTCGGC TCAGTCAAACGTTATATGCAGCAGGCTTTCCGCCAGTGCCTGCTTCTGAT GTAA >NE1079 Sigma factor, ECF subfamily ATGACCATCCCGGTTGTCAAGCTGGTAACGTGGCAGCAAGCGCATGATCT GTACAATAATCATCATGGCTGGTTGCAGAAATGGCTGTATCGCAGGCTGG GTAATACTTTCGATGCAGCAGATATTGCCCAGGATGTATTCATGCGGGTA CTTACTCGCCGGCAACCCTCCCAGATACACGAACCACGGGCATATCTGTC TTCCATCGCCCGTGGCCTGGTCGTCGATCACTGGCGTCGGCGCGAGCTGG AGCAGGTCTGGCTGGAGATACTGGCAGTTCTGCCTGAGCCCGAAACGCCT GCCCCTGAAAGCCGCCTGATCTTTCTGGAAACGCTGGTCGAGATAGACCG GGTGCTCGATTCACTCAAACCGGCAGTACGCACCGCCTTTCTACTGGCAC AGATCGATGGGCTGACCTGTTCGCAGATCGCAAAACATCTGGACGTATCC GTGGCGACTGTCGAGCGCTATATTGCCAAGGCACTGCGCCAGTGTTACGC ATTGCATTTCGAAGCATGA >NE2568 Bacterial regulatory proteins, ArsR family ATGACGGACCAATATACGCAGCCGGATTTCTCGGTCATGGTGGAAAAAAA GGCTTCCGCAGCCAAAGCCTGCTCCATGCTGAAGATACTGGCCAATGAAG ACCGGCTGCTGATCCTGTGTCAACTGATACAAGGAAAAAAAAATGTCGGC GAACTGGAACAGACACTTGGCATTCGGCAGCCCACCCTGTCACAGCAGCT CACTGTATTGCGTGATGAAAAACTCGTTTCTACCGAACGCCAGGGAAAAT ATATTTATTACAGCCTCGCCAGTCCGGAAGCGGTACAAATCATGAATACG CTGTTCAGTGTGTACTGTCAGAATGAGCATCATCATTCTCCGGATGACGT CACTCACAACGGCAGACAGTAA >NE1265 GCN5-related N-acetyltransferase ATGCTCATCCGTTCCGCCAAGCCTGAAGACGCAGAGTTCATCGGTTCAAT CCGAGTAGCGGCTTGGCAGGCCGCCTATCGCGGCTTCATGCCCGATACTT ATCTCGCCTCCCTAGATCCGGGAGCGAACCTCGACGAACTTCGAGCAGCG TTGCGCGCAGAGAATCCACCATTCACTCTTCGCATTGCAGAGACTGAGGG ACAGCCAATAGCTTTCTCGATCCTGGGCAAGCCGCGGTATAATGCTGATC AATCCATTGTCGAGTTATGGGCATTGAATGTTCATCCTACACACTGGCGA AAAGGCGCAGGTCAACAGCTTGTCAGGCAGGTACTGCTGGACGCCAAAGA ACAGAAATTCGTCTCTGTGGAACTCTGGTGCATTCAAGGTAATCTGGCCG CCCAGCGTCTGTATGAAATTTGTGGTTTCGTGCCCAACAGCCAGGTTCGT ACCACAAGCTCGCTCACGGGCTACCCGCTACACGAGTTGGCGTATACGTA TGCGCTCTAA >NE1729 conserved hypothetical protein ATGTCCACGCAATCCATACTGACCAAGCCGACTGAAGCAACGGCCTTTCA GCCAGATCAGGTTGTCAGGATTCTTGAGACTGTACTGCTGACGACACCCG AACCCTTGTCCATCAGTGATCTCAAGAAATTATTCGAAGGGAATATCGAC AAAAAAACATTGCATGAATCCCTGACCATCCTGAGTGAAAAATGGCATGA CAGCGGAATAAATCTGGTCTCGGTCGCGGGAGGCTGGCGTTTTCAAAGCA AACCCGAAATGCAGGTTTTTCTGGATCGGCTCAATCCGCAAAGGCCACCG CGCTATTCACGCGCCGTGATGGAAACATTGGCCATCATTGCTTACCGGCA GCCCGTCACCCGGGGAGACATCGAAGAAATCCGGGGAGTAGCAGTTTCTA CCCAAATCATCAAAACCCTGGAATCACGCGGCTGGATTGAAACCATCGGG CAGCGCGATATACCGGGCAAGCCCTATCTTTATGCAACCACCCGGCATTT TCTCGATGATCTGAATCTGCAATCGCTGGAACAGCTACCCTCTCTGGACA GTTTCAATTCGCTCGACCTGTCTGCTGACGAGGCTGAATCGGTCGATACG GATACGACCACCATTCAGGAATCCGGCGAACCCGCCTCACACGAACCGAC ACAACTTCTTTAA >NE1807 putative ATP-dependent RNA helicase protein GTGTCATTTGAAAATTTGAATCTGCATCCCGCAATCGTAAAAGCCGTACT GGCAGCGGGTTATACTGCCCCCACCCCCATTCAGCAGCAAGCCATTCCGG ATCTGATCGCAGGCCATGATGTCATGGCAAGTGCACAGACCGGAACCGGC AAAACAGCCGCCTTCATGCTGCCGGCATTGCATCGTCTGGCCACACCCGC ACAAATTCGCGGACGTGGCCCGCGCATACTGGTTCTGACACCAACACGTG AACTGGCTCTGCAGGTTTCCGATGCTGCCAGCAAATATGGAAAATTCCTG CCACGTATCAATGTCGTCAGTATTCTGGGCGGTATGCCCTACCCCCTGCA AAATAAACTCCTGTCACAAACCGTCGATGTACTGGTCGCCACACCCGGGC GTTTGATCGATCACATCGAACGCGGGCGGATAGATTTTTCGCGGCTGGAA ATGCTGGTACTGGACGAAGCAGATCGCATGCTGGATATGGGGTTCATCCA GGATGTCGAGCGCATCGCTCTCTCGACACCCGCAACCAGGCAAACGCTGC TGTTCTCGGCAACGCTGGACGTTGCAATCGAGAAAATCGCCACACGTCTG CTGAAAGCACCGAAACGCATTCAGGTGGCTGCTCAGCATACCAAACTCGA TCACATCGAACAGCGTATGCATTATGTAGATGATCTCACGCACAAAAACA GGTTACTGGACCATCTGCTGCGTGACACCACCATCAAACAGGCAATCGTA TTTACTGCAACGAAACGTGATGCCGATTCCCTCGCAGATAATCTTTCTTC CCAGGGACACAAGGCTGCCGCCATGCACGGAGACATGACGCAGCGTGAAC GTACACGCACTCTGACCGGCCTGCGTCAGGGCCGGCTCAAGATTCTGGTG GCTACGGATGTCGCCGCACGCGGAATCGATATTGCCGACATTACCCATGT CATCAATTTCGATTTGCCAAAGTTTGCAGAAGACTATGTGCATCGGATCG GGCGGACCGGCCGGGCTGGCGCTTCCGGTATCGCAGTTTCGTTCGCATCC GGGAAAGATGTTGCTCATCTGAAGAGAATCGAACGGTTTACCGGCAATCG CTTTGAATTTCATGTCATACCCGGTATAGAACCACGTACCAAACCAAGAT TTGGTCGTAGTGACGACAAACCAGGAAGAAGACCATCTTCCTCTGCTGCT GCACACAAAACCAGACGTTCATGGTCGGACAATCCCAATACACGCACGGC TTCCCCAGGTCACCGAGGAGACAAAGATGCTGGGTTCGGGCAACCATTTG GTCGTGAAACCCGTAAACGTCCGTTCAGGGACAGCAAATTCAACAGCGCC GATCGTTTTGCCCGCACGGAGTAA >NE0896 Helix-turn-helix motif ATGTTGCGAATTTTCATGGAATCACTCCCCAGCGTGTTCGGCGATTGCTG TCTGAAGGTCGGATCAAGGGATTCAAGGATTCTCACAACATCTGGTGCAT TACGTCTCTTGATATTCGACCACCGCGTAAATCGGGTTTTCATCGTTTCC GCCTCAAGTTTCACAAGGGGGATGGCCATGCGTAAACGCCACTACAAACG CAAGCCGTACAAGCCTGTGAACTATGACACCATCCGTGAAACAAGGCTGC TGGCGGGTCTTACGCGGCAACAGGTTGCCGATATGCTTCGGGTTTCACTG CGTACTGTCCAGTACTGGGAACGCGGCTTGGTTCACATGCCGTATGCCGC GTTCCGGCTTCTTCGTATCCTGACGGGCTATGAACTACCCGGTAAAGAGT GGAAAAACTGGATGTTACTACGTAACAAATTGATTTCTCCTGAAGGCAAA ACCTTTACTCCTGGCGATCTCTACCCGCTTAACTGGACGATCGACAAAGC CCGCATGTGGGATAAGGAATACCGTCGTCGTGTCGGTTCTGGGGAAACAG CACTGGTACCGTTTGCGTTACCCGGTAATGCGTGGCGCGGCTGGATGTGT CATGACGGTCGTCTGCTCTCCCCAGATGGTATGGCGTTTACGCCTGTCCA CCTCAATTTCCTTGCGTCCATGGTTGATCGGATCTGCGGGGAGATCTCTT CGGTTCCGGTCAAGGTCATTCAGGGGGATACACCATGA >NE0320 GCN5-related N-acetyltransferase ATGATGAGTTCCGAAATCCGGGTGCGGGTTTGCTCATCTGGTGATGAAGA AGCGCTTGCACTTATTGGCCAGGCAACGTTTCTTGAAACCTTCGCAGGTG TTCTTGCAGGATCCAACATCCTGGCGCATTGTGCCCGTGCTCATTCTGTC GAATGTTACCGGAGCTGGCTGGCCGACAGCCGTTATAAGCTCTGGCTTGC TGAAATCAGTCCAGGTAATGCGCCCATCGGCTACATGGTCGTATCGCCGG CTGAATTGCCGTTGGCAGATATTTCCCTTCGGGATCTGGAGTTGAAACGC ATTTATGTTTTCAGCAGGTTTCAGGGAAATGGTCTGGGCAGAAGGCTGCT GCAGGAAGCCATCGCCGAAGCCCGTATTCGCAAGGCAGAGCGCTTGCTGC TCGGGGTATATGTTCGTAATGATGCCGCAATCGGTTTTTATACCCGGATG GGTTTTTGCAAGCTGGGATACCGAAAATTCAATATGGGCGGACAGAAATG TGATGACTACGTCATGGGATTGACGTTGTGA >NE1452 Uncharacterized protein family UPF0074 ATGAGATTGACGACAAAGGGACGGTTTGCGGTAACGGCTCTTCTGGATAT CGCGATACGGCATGGTAACGGGCCGGTTGCGCTGGCCGATATCAGTGAGC GGCAAAGGATTTCACTGTCTTACCTGGAACAACTGTTCGCCAAATTGCGC CAGCGCAAACTGGTTGATAGTGTGCGCGGTCCGGGTGGAGGCTATTGTCT GGCCAAGGGGCTTGACGAAGTATCGGTGGCCGACATCATTCTGGCTGTGG ATGAACCCATTGACAGCACGCAATGTGGTGGCAAAGAAAACTGTCTTGGT GACAGCAAATGTATGACGCATGACTTATGGGCGAAACTGAACGAGATCAT ATTTGATTATCTTGGTCACGTTACCTTGAAGCGGCTGGTGGAGGAGCAGA GTCAGCGTGAGCTGCAACGAGAATTGCAACGTGAGCAGGCAGTCGTCAAG TTGTATGACATGCGGGAAGCTGCGTTCTGA >NE0937 possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding ATGAATACTCATTCTCTCGTACCTAATTACGGTATTAGTGCCAGACAGTG CTACGAACCGATTCGTGTTCTGATTGTGGACGATCATATCGACTTGATCA GCAATGTTTTCGCCTACCTGGAAAACAAGAACTTCATTCTCGATGCAGCC AGAGATGGTGAATCCGCTTTGGAATTGAGCAGTAATGGGCAGTATGATGT GCTGATACTCGACTGGATGTTGCCCAGGCTCAACGGATTGCAAGTGCTCC AGCGTTTGCGGGCGGCTGATGTGGATACTCCGACGCTGATCCTCACTGCC AAGAGTGATATTCCTGATAAGCTTTCTGGATTCGCTGCTGGTGCTGATGA TTACCTGACGAAGCCATTCCTGATTGCAGAGCTTGAGGCCAGAATCTTAG CTTTGCATACAAGAAGGATAGGGCGTGCGAAAATCTTGCGGGTAGGTTCC CTCATCTACCATCTCACATCACAACAAGTGATGCGAGATGGCAGTATCAT TCATCTTCACAGTGGTTCTCGGAAATTACTACAAGTCTTGATGAGGGAGA GCCCGAACGTGGTAACGAAGGACCGCCTGGAAAGTCTACTCTGGGGTGAG GATCGACCCGATAGAGACCTTTTACGTACACACATCTACGAGTTACGCAA AAGCATCGACGGTGATTATCCATTGAAGTTCGTGCAAACTGTTCCCAAGG TTGGCTATCGGATTGTCGATCCAGAGCTTGGTCCATGA >NE2138 Sigma factor, ECF subfamily ATGTCTTCATCGGATTCCCCTGTATTTACAACATTTTATAAACAATACCA GTCACAATTGATCAGTCGCATCACTCGCCTGGTCGGTTGCCGTGAAACCG CAGCTGATCTTGCCCAGGAAGCCTATATCCGGTTACTGGGCCACCGCGAT TTATCGAATATATTGAGCCTGTCCGCTTATCTGTTCCGGATCGGCCATAA TCTGGCCATGGATCACCAGCGTGATCCTGCAAATAAAATAGAATATCTGC TGCTCGATGAGACACTGCCCTGCCCGCTGCTCCAGCCGCATGAAATCGTG AGCCTCCGGCAGCAGTGCAGACTATTGCTGGACACGATTGCCTCCATGCC GCAAGGTTGCCGCGATGTTTTTCTGCTGCGTAAAATCGATGGGCTCAGTT ACAGTGAAATCTCCATCCGCCTCAATATTTCCGAAAAAACCGTGCAACGA CGTCTGGTACAGGCCATGCTGCGTTGCCACCGCAGCATGAACCAGATAGT CATCCGGTGA >NE1625 Ribonuclease II domain TTGGTAAACGTTTTTTACGAGGAAGCAGGTGCGCTCAAGGTCGGCAGCAT TCTGACCGACAATACGACCTCTCTGCAGATCGAATCTGCACATGGAAAGC GCTCCAAGATCAAGGCCGCATTGGTTCTGTTACGCTTCGAGAACCCGCCC ATGCATGGATTCATGCAGCAGGCGCAGGAAAAAGCGGCCGACATCGACGT GAATTTTCTATGGGAGTGCTGCGAAGAGAACCGGGAATTCACCGGACAGG AGCTGGCTGGTGATTATTTCGGCCACACGCCTGATCCTCTCGAAACTGCC GCCATCCTGATTCTGCTCAGCCAGAATCCGATTTATTTTCATAAGAAAGG AGTGGGGCGTTTCAAGGCGGCCCCGCCGGAAATTCTGCAGGCTGCGCTTG CCAGCCGTGAAAAAAAACGACTGGCCGAGGAAAAACAGGCCGGTTACGTG CAGCAATTGATGGCATTCGAACTGCCCGATACCTTCCGGCCGCTGCTCGA TGACCTGTTGTACAAACCGGACAAAAACACGATCGAATGGAAAGCACTGG AAACCGCGTGCGACGCTACCCGGTTGAGCGTGCCCAGGCTGCTGGAACGA TGCGGTGCCATTCCCTCAACGCATGATTACCACTATAACCAGTTTTTGTA CGAACACTTCCCGGAAGGTATCGACACAGACGCATACCCTGCCGACTTTC ACCTCTTGGACCCGGAAGATTTGCCAGTGGCCGGCGTCAAGGCATTCAGC ATCGACGATGCCACCACGACTGAAATCGATGATGCCTTTTCAGTCACCCC GCTGAACTTCGGCAGCTTCCGGATCGGAATACACATTGCCACCCCTGCTT TGGGAGTGGCACCGCACTCCCTGCTCGATAAATTTGCGGCAAAACGCCTG TCCACCGTCTATCTGCCCGGCCGTAAAATCACCATGCTGCCGGAAAGCGT GATCCAGCACTTTACACTGGGAGAAGCACACCACCGGCCGGTACTCTCGC TCTATCTGGAAGTTGCGGATGATTTCACCGTTACTCGTACCTTCAGCCGG ATCGAAACCATCGAGGTTTCCACCAATCTGCGCCTCGATTCGCTTGAACG GCAATTCAACGAAATCACGCTGCGCGAGAATCAGACGGATTATCCCTTTG CCCATGAGCTGAGATTGCTCTGGAATTTCTCCTGCAAAATGGAAAAATTG CGCGGCAAGGATCAGGACATCAACAGCGAAAAGATCGACTACAGTTTTAT CATCGATCAGGATCGTGTTTCGGTTTACGAACGCCGCCGGGGAGCGCCCA TCGATAAAGTGGTATCGGAACTGATGATTTTTGCCAACGCCGAATGGGGC AAACAACTGGCAGATGCCGGTTACGCCGGGATTTATCGCAGCCAGGGAAA CGGCAAGGTGAAAATGAGCCTTTCCCCCGCACCGCATCAGGGGTTGGGCG TATCCCAATACGCCTGGAGCAGTTCACCCATGCGACGGTATGTCGATCTC ATCAACCAGCGCCAGTTGATCGCGCTGGTATCGGGCAATCCACCTCCCTA TACCCGCGAGGATGATACGCTGCTGATCGCCATGCGCGATTTTGAAATGG CGTATGCAACCTATGCGGAATTCCAGCGCGGCATGGAACGCTACTGGTGC CTGCGCTGGCTGCTGCAGGAAAACATCAGCACATCCGGTGCCATCGTCAT CAAGGAAAACATGATCAAACTGGACCGCCTGCCGCTGATCGTACGTATAC CCTCGTTACCCGAACTGGCACCCGGCACATTGGTGGCCGTCGGTGTCTCA CAGATCGACCTGATCGATCGATCACTCAATGCCAGCTTTCTTGGTAAAAG TGAAGGCTGA >NE0443 hypothetical protein GTGACTGACGATCAGCCTGATCTTTCTGCAGAACCGGAAGAAGATGAACT TCTGCTGGGTAAAGTGGATTCGATGTTGCACCGGCATCGGCGCGAACAGT CTTCCCTCATGCAATCGTCGGAACAGACTGTTGCAAAGCTGGATGATCCT GGGGAAATGCTGCCTGCCGAAGTCGGACCTGTTGAAGTACCTCAGAATGA TGAGAGTGTATCGTCCGAGGTCGACGGGATTCCCGTTCTGACTGAGCAGG TGACGCTCGTGCTGGACGAATGGCCCTCCCAGTCAGAAATCTCCGAGCTG CTGTATTTTGCCTTTGATGCAGCATTGAGAGAAACCTCCATCCATCTTGA TCCTGCTGAGCGGCTTACCCTGATACAAGCATTGGGAAAACGGCTACCCA AGAATCTTTAA >NE0263 Bacterial regulatory proteins, ArsR family ATGCCTTATTATTTATTCCACGGCACATCCCATTATTTCATAATTTACTT AATTAATTTAATGCTAAATAATGAAAATATGGATAGATTCGCAGCCCTCG CCGAACCGAACCGCCGCCGCATGATCGAGATCATAGCAGCGCAGGGGGAG ATTGCCGCTTCGGATATCAGTAATCAGTTTGATATTAGCCCGTCTGCCGT ATCGCAGCACCTCAAAGTGTTGCGGGAAGCCGAACTGGTGAAGATGGAGA AGCGAGCGCAGCAGCGTATATATTCTATAAACCCGCAAGGCGTGGATGAA ATGTGGGAATGGCTGAGCCAAATGCGGAAATTCTGGAACGAACGTTTTGA CGCATTGGATGCATTGCTTTTAACAGAACATAACACACCGAAAGGAAATA ACGATGAGCACAACACCAATTGA >NE1313 Response regulator receiver domain:Helix-turn-helix Fis-type ATGGATCGCCCCAGTCTGCTGATTGTAGATGATGATGAAACTTTCTGTGA AGTGCTGGCAAGAGCGATGGTAAAGCGCGGGTTTGACACCACCTGCATGC ATGACATCAAAACTGCGCTCGAGCAGGCGGAAGTACTGATGCCCGAATAC GCCATCATCGACCTCAAGCTGGGAAATGAATCCGGTTTATTACTGGTCGA GAAAATAAGGGAACTGGATCCCGGAACCCGTATCATCGTGCTGACCGGTT ATGCCAGCATTGCAACGGCAGTTGAAGCCATCAAGCTGGGGGCCACCCAC TACCTGGCAAAACCGGTGGATGCGGATGACATCATGGCGGCATTCGAGCG CACGAGTGGAGATACCGAAACCCCTATCAGCCCTCATCCGCTTTCAGTGG AACGGCTGGAGTGGGAATACATTCACCGTATCCTCATGGAAAACGACAAT AACGTCTCTGTTACGGCCAAGGTATTGAATATGCACCGCAGAACGTTGCA GCGCAAACTTTCGAAGAAGCCGGCACAGTTGTAA >NE0917 probable RNA polymerase sigma factor transcription regulator GTGCAGGATGAGCATGCCGCACTGGATATCGTGCAGGACTCCATGATGAA GCTGGTCGAGAAATACCCGCATAAATCACTTACCGAGCTTCCTCTCCTGT TTCAGCGAATTTTACAGAATACCATTCGTGATTTTTACCGGCGGCAGAAA TCCCGTTCACTCTGGGTGACCTTGTTCTCATCGTTCATGCCTGATTCGAA TGAAAAAGAAACCGGATATTCGGATATCCCCGAATCACTACCGGTGGCAC AGGATTTTGGTTATAAAAACAATCCTGGTACTGCGGCAGAACAATCCGAG CTCATCGAACTGATCAGCAAAGCACTGGAAACTTTACCGCCACGTCAACG GGAAGCCTTTCTGCTGCGTTACTGGGAAGAGATGGATGTAGCCGAGACAG CGAAAATCATGGATTGCTCGGAGGGAAGCGTAAAGACACATTGTTCCCGT GCCGCACATACACTCGCTGCTCTGCTGGAAAGTAAAGGAGTCAAACGATG A >NE1544 Bacterial regulatory protein, LysR family ATGGATCGATTCGAAAATATGAATGCGTTTGTGCGTGTTGTGGAAACAGG TAGCATCAGTGCGGCTGCCGATCGCATGGATATAGCCAAATCCGTTGTCA GCCGGCGTTTGAAGGAGCTTGAGGAACATCTGGGGGTGGAATTGTTTCAC CGCACCACGCGGCAAATGAATCTCACCGATAGCGGGCGCGCCTTTTATCA GCAATCCGTGCGCATCCTCGCTGATGTTCTCGAAGCCGAGCACGCCACGT CGCAGTTTCACGGCAGGTTGAAAGGTCATTTGAAAGTGGCGGTTCCGCTC AGTTTTGGCTTGATGCATCTGGGGGCCGCCATCTCCACCTTTCTGCAAAC TCATCCGGATATCGAATTTGATCTGGATTTCAATGACCGGCAGGTCGATT TGCTGGCGGAAGGTTTTGATCTTGCCATCCGCATCGCAAACCTGCCCGAT TCCAGCTTGATCGCACGTCGCCTTGCACCTATTCAGGCTGTCATGTGTGC CAGCCCGGCATACCTTGAGCGCATGGGCACGCCGCAAGCGCCGGAAGAAC TCATCCGGCATCGCTGCCTGGTTTATAACCTGGTCAGTCACAGCGATAAC TGGAATGTTTATGGCACCACGGGAGAGTTGATCAAAACCCGGATCATTCC CTATCTCAAGGCCAGTAACGGGGAATTTCTCCGTGATGCTGCCGTCGATG GTCTGGGTATCGTATTGCTGCCAACTTTTATCGTTTACCGGGAAATCCAG CGCGGTGCATTGATCCCGATATTGACCGGATACCACTACGCCCAGCTGGC TGCTTATGCCATTTACCCGCAAACCCGCCACCTCTCGCAGCGGGTTCGGG CATTTGTCGATTTTCTAAGCCAGCGGTTTGAAGGGATGCCTTACTGGGAT GCGTGTCTGAATCAATAA >NE0880 probable ATP-dependent DNA helicase-related protein ATGTCTGATCTCAATACTGTTTTCTCGGCTGACGGGCTACTTGCCCGGAA TATACCAGACTACCGTCCCCGCACCCAGCAACTGGAGATGGCGCAGGCCA TCGCGCAAGCCATAGAGAGTCAGGAGGTTCTGGTTACCGAGGCCGGTACA GGTACGGGTAAAACCTATGCCTATCTGGTACCGGCTTTGTTATCAGGCGG AAAGGTCATTTTATCGACGGGTACCAAAACGTTACAGGATCAGCTTTTTC AACGCGATATCCCAACCGTGCGTGCCGCTCTGAAAATACCGGTCACTATC GCATTGCTGAAAGGACGTGCCAACTATATCTGTCATTATCATCTTGAACG TACCCTGAATTCAGATCATATTCACTTTGCCAGCCGCACTGAAGTAAAGT ATCTCAATCTGATCGAACGCTATGCCGGTACCAGCAGCCACGGCGATAAA AGCGGGCTGGATAAAGTCCCGGAACAAGCTGCCATCTGGCAGCACGTCAC TTCCACACGGGAAAACTGTCTGGGATCGGATTGCCCGCATTACCGACAGT GCTTTGTGATGGAAGCGCGCAAGCGAGCACTATCAGCCGATATCGTAGTT GTCAATCACCACCTGTTCTTTGCTGATGTCATGCTACGTGATGAGGGTCT CTCCGAATTACTGCCTGCCTGCAACACCGTGATATTTGATGAGGCGCATC AGTTACCCGAAGTGGCCAGCCTGTTTTTTGGTGAATCGGTCAGTACCGGC CAGATACAAGTTCTGGTACGTGATACCGATACTGAAGCACTACTCGAGGC AAAGGATTTTGCTCCCTTGTTCGATGCCACGGCAGCTGTCGGGAAAGCGG TGCTGGATCTGCACCTGACAATCACGGAAAAACATACACGCATGTCTTCC GCTTCCGCTGCACGCTATCCCGGTTTCAGTGAAGCGCGGCAAGTCTTACA GGAAAAACTGGTGCTACTGGCCGGATTGCTCGAAACTCAGGCGGTTCGTT CGCAAGGGTTGCAAAACTGCTGGCTGCGGGCACAGACTCTGCTCAATCGG ATCAGGCAGTGGCATGAACAATCTGAATCCCGGGAATTCATCTGCTGGGT CGAGACCTACAGTCAAAGTCTGCAATTCAACACTACACCTTTATCCGTTG CAGAAACATTCAGCAAACAACTCGATGCTTCCGCGCGCGCCTGGATATTC ACCTCCGCTACCCTGTCAGTCAAAAAGGATTTCTCTCATTACAACCGGAT GATGGGATTGTTCGAGGCTAAAACGGCCAATTGGGACAGCCCGTTCGATT TTCCCAATCAGGCGTTACTCTATGTGCCTTCCCAACTGCCCGATCCAAAT ACGCCACACTACACTGAAAGTATCGTTCAGGCTGTGTTGCCGGTCATCAA GGCAAGCCAGGGACGGGCATTCATCCTGTGTACCAGTCTGCGCAACATGC AACAGATCCATGAATTGCTGCAGGTTGCCTTTCAACGGGAACAGCTTGAA TTTCCCTTGTTGTTGCAAGGACAGGAAGCTCGCTCTGCCCTGCTGAATCA GTTTCGCCAGCTGGGCAATGCGGTGCTGGTGGGAAGCCAATCCTTCTGGG AAGGTATCGATGTAAAGGGAAATGCCCTTTCACTGGTCATCATCGACCGG CTGCCCTTTGCTTCACCGGATGATCCGGTATTGTCTGCACGCATCGAAAA ATTTACCCGTGAAGGCCGTAATGCATTCATGGAATACCAGTTACCCCATG CGATCATCAGCCTGAAACAGGGAGCCGGCCGCCTGATACGAGATGAAAAA GATCGTGGGGTGCTGATGATTTGCGACCCGCGGCTGGTATCCAAACCTTA TGGCAAGCAGATCTGGCAAAGCCTGCCACCGATGAAACGCACGCGGGATC CGGATGAAGTATTACGTTTTCTGGAAAATGTTGACCAGTAA >NE2311 possible helicase (Snf2/Rad54 family) ATGGTGCAGCAACTTCTGACGCCGCATCAAAGCCAGTACATCGCCTGGCA GCTTACTCGCCGGGCAGCCAAAGACAGCGTAGAGTCGCTGGCCTCGACGT TGGTTGATTCTCAGGTTGACCTCAACCCGCACCAGGTCGATGCAGCTCTC TTCGCATGCCGTAATCCGCTGTCGCGTGGTGTGATCCTGGCGGACGAGGT AGGGTTGGGCAAGACGATTGAAGCGGGGCTGGTCATTTCCCAACATTGGG CAGAGCGGCGTCGCAAGATGCTCATCATCGTGCCTGCCAACCTGCGCAAG CAATGGCACCAGGAATTGCAGGACAAGTTCAATCTTCAGGGGTTGGTCCT CGAAGCGAAAAACTATAACGCCATGCGCAAGGAAGGTGTCACGCAACCCT TTCTGCATGCAGGCGGGCCGATCATCTGTTCCTACCAGTTCGCCAAAGCC AAGGCCGATGACCTCAGGCGCATCCATTGGGATCTGGTGGTCATGGATGA AGCCCACCGTCTGCGCAATGTCTACAAGAACGGCAACGTCATTGCCCGGA CGATCCGCGATGCGCTGGAGCACGTCGATGCGAAAGTCCTGCTGACGGCC ACACCGCTGCAAAACACCCTGCTGGAGCTTTACGGCCTGGTGAGCATGAT AGACGAGCGTGTGTTTGGCGATCTCGATAGTTTCCGAACTCAATTTTCTG GCGTCAGAACCGAACAATCCAACCGGGCACTGCGAGAGCGGTTGACGCCG CTTTGCAAGCGCACGCTGCGCCGGCAAGTCCAACAGTACGTGCCGTATAC CGCACGTATCGCCATCGTCGAAGAATTCACGCCCAGCCAGGAAGAGCAGC AGCTCTCCGCATTGGTCGCCGATTACCTGCGCCGCCCTAACCTCAAGGCA CTGCCTGAAGGCCAGCGTCAACTGATCTCGTTGGTGCTATGGAAGCTACT GGCCTCGTCCAGCCACGCCATTGCCGGGGCGCTGGAGACCATGGCCAATC GTCTTCAAGGACAATTGGATGAGTTGCCTGATGTCCCTGACCTGACAGAG TCGCTGGATGACGACTACGAAGGACTGGATGAAACTGCCGACGAGTGGAA TGGCGCAACCGCCAATGATGCCGATGCCAGCGCCAACGAACGAGCAGCCA TTGCCGACGAAGCGGCCGAACTTCGACGCTTCAAGGAGTTGGCTACGAGC ATTCGACAGAATGCCAAAGGGCAGGCGCTGCTGACAGCACTGGACAAGGC TTTTGCCGAGCTGGAGCGTTTAGGAGCGAGCAAGAAGGCCATCATTTTCA CCGAGTCCAAGCGCACCCAGAATTACCTGCTTTCCCTGTTGGCTGAAACA CCCTACGGCATCGTGCTGTTCAACGGCACCAACACCGATGCCAGGGCGCA GGCCATTTACAAAGACTGGCTGCAACGGCATGAAGGCAGCGATCGCATTA CTGGCTCCAAAACCGCTGACACCCGCGCCGCGCTGGTTGAGCACTTCAAG GAGCGCGGCACCATCATGATCGCCACGGAGGCAGGCGCGGAAGGCATCAA CCTCCAGTTCTGCTCTCTGGTCATCAATTACGACCTGCCGTGGAATCCAC AGCGTATCGAACAGCGCATCGGTCGCTGCCACCGTTACGGGCAAAAGCAC GATGTGGTGGTGGTCAACTTCGTGGACCGCAGCAACGAGGCGGATGCCCG TGTCTATCAGCTGCTGTCGCAGAAGTTCAAGCTGTTCGAAGGCGTATTCG GCGCCAGTGACGAAGTGCTGGGAGCCATTGGCTCCGGTGTGGATTTCGAG CGGCGGATCGCCGCCATCTACCAAAATTGTCGCGAACCCGAAGAAATCCG CAGCCGCTTCGAAGACCTCCAGCGCGAGCTTTCCAGCGAGATCGACGAAG CGATGCTCAGAACACGGCAGCTTCTGCTGGAGAATTTCGACGAGGAGGTG CAGGAGAAACTGCGCATCCACAGCCAGGACAGCCAGGCAGTGCTGAACAA GTACGAGCGCCTGCTGATGGACTTGAGCCGCACGGAATTGCGGGATCATG CCCGCTTTGATACTGCCGAAGAGGTCAATGGCTTTGTCCTGCACAGCCTG CCCGATGGGCTAGGTCTCGCCACTGGCAGCCGAGAACAGGCAGTGATGGC GGGGCGCTATGAACTGCCCAGACGCAGCGGCGATGCGCATCTTTACCGTA TGGGCCATCCCTTGGCGGAATGGGCCATTGAGCGCGCCAAGGCAAGAGAC CTACAAGCCCCTGCACGATTGGCGTTCGACTACGCCGCCTATGGCAAACG GCTCGTCAGCCTTGAAAAATGGCGCGGCCAGTGTGGCTGGCTGAGCGTGA CCCTTTTGTCCGTCGAAACCCTGAACGATCAGGAGCAGCACCTGGTTGTT TCCGCCTGCACCCAAGCGGGGGAAGCGCTGCCAGAGGACGATCCAGAAAA ACTGCTGCGCCTGCCAGCGCAGGTCGAAGGCGACGCGCACCTGCAAGTAT GTGCCGAGCTCGTCGCCAACGTCGAAAGCCGGAAAAGCGTACTTCTGCGC GGGATCAATCAGCGCAATCTGGGCTACTTCGAGCAAGAGGTGCAAAAGCT CGATACTTGGGCCGATGACCTGAAGCTCGGGCTGGAGCAGGAAATCAAGG CCATCGACGGCGAGATCAAGGAGGTGCGCCGCACCGCCGCTGCGTCACCC ACGCTGGAAGAAAAGCTGGCACATCAGAAACGCCAGCGAGAACTGGAAAC CAGGCGCAGCAAACTACGCCGCGACCTGTTTGCGCGGCAGGATGAGGTGG AAGAGCAGCGGAACAAGCTGATTGGGGAGTTGGAAGAGCAGCTCAAGCAG CAGGTAGCGGAACGCATGTTGTTTACCGTCGAATGGGAGTTGACGTAA >NE0189 Helix-turn-helix motif ATGCCAATGACCGAAAAAGAATTGAAGGAACGTGATGCCAAGCGCGATCT GGGTGCCGAACTGCTGGAATCCGTCGTACAAATGAAATCAGGGCATGCGG GCCGGATTCATAAAGTTGAAATTTCCCCTGTTACTGCAGCACGACTGAAA TCCGGCCTGTCACAGGCTGATTTTGCCAGACTGTTAGGCGTATCAATCAG AACCTTACAGGATTGGGAACAAGGTCGCCGTCAACCGAGTGGCGCAGCCA GGACATTAATTACCATTGCCGAACGCCGGCCTGATGTACTGAAAGAAATT ACCTTATAG >NE0667 possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain ATGATGAGCACCATGAGAGTTCTTGTTGCCGATGATCATGAAGAAACGCT GAACTTCATCCGGCGCGGACTGACGCAGGCGGGTCATATCGTCTCCACGG TCGACAATGGCCGTGAAGCGCTCTTCCGCGCTACCGAGGAAAGCTATGAT GCAATTGTCCTCGATCGCATGTTACCCGGACTCGACGGTCTGTCGATCCT CAAAATGTTACGTGCTGGCGGCATCCGAACGCCAGTGCTGCTGCTCACTG CCATGACCAGGATAGCGGACCGGGTGGAAGGATTGGAGAACGGTGCGGAC GATTATCTCGTCAAGCCCTTTGCATTTTCCGAACTGCACGCGCGTCTCAA CGTGATTATCCGGAGACCTGCCGTTCTGGAACCGGAAACAAGCCTCCGCG TGCTGGACATCGAACTGGACCTCGGCAAGCGTATCGCCCGCCGAGGCGGA AGGCGCATCGATCTTCAGCCGCGTGAGCTGCTGATGCTTGAAGTACTTCT GCGTAATCCTCATCGGGTCATGACAAAGACGATGCTGCTTGAACGTGTCT GGGATTTTGACTTCGATCCTCAGACCAATATTGTCGAAACCCATATCAGT CGCCTGCGCGCGAAGCTCAATGCCGACTTCGATCAGGATGCGATCATCAC AGTCCGCGGCGCAGGCTATATGATCCGCAGCGAATGA >NE2525 possible ATP-dependent DNA helicase RecG-related protein ATGCGTAGCGCTACCGATCTACTGGATGAACTCAATGCGGTGGACGAGTC TGCCCGTATCGAAGCCAAGCGTGCCAGCGACATGGGTAAATCGGTGATGG AAACGGTCATCGCCTTTGCCAACGAGCCCGGCCTGGATGGCGGCTACCTG CTACTGGGCGTGGACTGGGCGATCAACGACAAGGGCGATACCGTGTACCG GCCGGTGGGGTTGCCCGATCCGGACAAGGTGCAGCGTGATCTCGCCAGCC AGTGTGCCAGCATGCTCAACGTCGCTCTGCGGCCAGAGATGCAGTTGGAG CAGGTGGGTGGCAAGACGCTGCTGGTGGTGTATGTGCCCGAGGCTGACGT CACTCACAAACCCATCTACAAAAAAGCCACGGGCCTACCAGGCGGCGCTT ACCGCCGCATCGGCTCAAGCGACCAGCGCTGCGTCGATGAAGACCTCTGG GTGTTGCGTGGTGAAAGCCAGCCCTTGCATGGCCCTGATTCAAGCATTCT TTCTGATGCCCGCGCCGACGACTTTGACCCGACCGCCATTGCCGCGTATC GGCGTGAGCGTGCCCGCATCAACCCCCAGGCCGAAGAGCTGGACTATGGC GACGAAGACATGCTCGAAGCGCTGGGGGCACTAAGGCGTGTGGATGGTGT TTTGCAACCCACATTGGCTGGCATCGTTTTGTTCGGTAAACCGCTAGCTT TGCGCAGATTGCTGCCCATGGTGCGTATTGACTACATACGTGTACCGGGC AACGAATGGGTCGAAGATCCAGAAAATCGCTTCCAATCCATCGACATCCG CAAGCCCCTGATGCTGGCATTGCCGCTCGCCGAAGCCAGCATTATTGATG AGCTACCTAAAGGCTTTCGCCTGCCAGAGGGCCAGCTACAGAGCGTGCAA GAGCCCATTCTGCCGCGCAAGGTGATCCGCGAGGCGCTGGCCAATGCCGC CATGCACCGCAACTACACCCTGCACAGCCCGACGCAGATCATTCGCTACA GCAACCGCATCGAAATTCGTAACGTCGGCTACTCCCTCAAGGAGCCAGCG CAGCTGGGCTTGCCAGGTTCACGTCTGCGCAACCCAGCCATTGCAGCAGT GCTGCATGATCTGCATCTGGCCGAAGCCAAGGGTACGGGGATTCGTGCCA TGCGTCGCCTGGCTGCAGATGCAGGCTTGCCGCTGCCAGAGTTCCACTCA GACCGGCAGGCCAATGAATTTAAGCTCACTCTGTTTCTGCACAACCTGCT CACCGAAGAAGACCACACCTGGCTGCGCAATTATGCCGGCAGCACACTGG GCCCCGACGAAGCCAAGGTGCTGATCTATGTGCGGGCAACCGGCGCGGTG GATAACACCGCCTGCCGCGACTTCTGTGGCTCGGATACCCTGGCCGCCAG CATGGTACTGCGCCGGCTGCGCGACCGGGGCCTGCTTGAGAAGCGGGGTG CAGGCAGTCGCACCTATTACACCCTGGCCGGTAATGAGCCTCGTCCGACT CTGGAGAGCGCACAGTCAGAGCTGCCGTTGGATGTCCCCGCAGACACCCC TCCTGTTGGCCAGCCTCAGCCTGCAGAGGCGGTAGCGGGCCAGCAAGCAT GCAACCCTCAGCTTGCAACCTTGCCGCCTGAGCTTGCAACCTTACTTGCA ACCTTGCAGGGCCGGATCAGCAGCGAAGCCTTGCGTGACGGCATCCGCCG CCTGTGCCAGTGGGCGCCCCAGAGCGGTGATCAACTTGCAACCTTGCTGG GAAAAGACCGCGACTACCTGCGCAACAAACACCTAATACCCATGGTGCGT GACGGCCAATTACGTTTCCGCTACCCGGAAAGCGCCAAACACCCACACCA GGCGTATGTCGCCCCAGAGGACAAGCGTAATGATTGA >NE1041 possible sigma-70 factor, ECF subfamily ATGATGCTGCTGCCGACATCGTGCAGGAAGCATACGCGCTTACTGGCTCT CCAGCAGGCCGGGCAGCATATAACCGAATCACGCGCTTTACTCTATCGTA TTGCGCGTAATCTGGTCATCGACCGTTATCGCCGTGGCCAGGTACAAGGC TGGACCACAGATAATCACTCACTGGAAAATTTTCCTGCACAACGTGCCTG TGAACCGGATGCACTGGTTGCATCATCCCAGGTTTTACAAGCGGTACTGA CTACTATCGATGCATTGCCATTGCGTTGTCGTGAAGCTTTCATCCTGCAT CGTTTCGATGGACTCAGCCATTCCGAAGTAGCAGAACATATGGGAATTTC GCGTAAGGCGGTTGAGCAGCATATCCAGCATGCCATGCAGGTGATCCGAC GTTGTCGCATGCAAATGGAAGGAGATACTGATACCTCTGGCTCCTGTCTT GCAACGCAGAAAAAACGGGTGTGA >NE1311 Helix-turn-helix motif GTGATGAGTTCCATACGAACCACAGAACAACTCGGTGACGCACTGCGTGC TGCACGCAAACAGCTGGGCTTAACACAGCCCCAGTTGGCTTTGGCGGCAG GGGTTGGTGTGCGCTTCATCGTCGACCTTGAAGCAGGCAAGCCCACTCTG CGTCTGGAAAACGTGCTGCGCGTGATCGACGCGTTGGGTGGAGCGCTCCA AATCACCGGCTTGTCATCCTCAGACTCCGAAAATCACCCTGAGGGCAACC AGCATGGCGCGTGA >NE2511 AraC type helix-turn-helix:ThiJ/PfpI family ATGACAGCCATCTCTATAGGCAATAATGACAACTTTGATATCATTGTTGC CATGAAACTCCACATCCTTGTTTGTGATGGCGTGTTTGATCTGGGGCTTG CGGCGCTCACTGACACAGTGGGCTTGGCCAATGCGATGTCGGGCTCGCTG CCACAGGCTCCCGCGCACATAGAGCTCACGCTGGTGGGCGTGCGGCGTCG CATCCGAACTGCGCAAGGCTTGACGGTCCCCGTGGTCACTGCGCGTGGTG TGCCGGAACCAGACGTCGTGCTCGTGCCCGCGTTTGGTGACAAGATGCCT GACACGCTCTCGGCTCGGCTCACACGCCCCGACGTGCCCGATGCGGTCGC CATGCTACAGCAGTGGTCCACCGCTGGCGCGCACCTTGGTGCCGCCTGCT CCGGTAGTTTCTTGCTTGCAGAGAGTGGCCTGCTTGATGGACATCGTGCG ACGACGTCATGGTGGCTGGGGCCGATGTTTCGGCAGCGCTATCCGAACGT CACGCTGGACGAGTCACGCATGATCGTGAACTCGACACGCTTCACTACCG CGGGTGCCGCTTTAGCCCACGTCGACTTGGCCTTGCGCATCATCCGGGGG CGCAGTCCAGCGCTGGCGGCCCTAGTGGCACGCTATCTGCTGGTCGAGGC ACGCAGTTCGCAAGCCGAGTTCGTGATTCCCGACCACCTTGCACATGCCG ACCCGATGGTGGAGCGCTTCGAGTGCTGGGCCAGACGTCAGCTCGCGAAG GGGTTCTCGCTGGCCGAGGCGGCCAGCGCCGCGGGCACAAGCGAGCGCAC CTTGGCGCGGCGGCTGCAAAGCGTTTTGGGAAAGACACCGCTGTCGTATT TCCAGGACCTGCGCGTGGAGCATGCCGTCCATCTCTTGCGCACCGGGAAC GCCAGCGTCGACCAGGTCGCCGCACAGGTCGGGTACTCGGATGGGGTGAC CCTGCGGGCCCTGTTGCGCCGCAAGCTGGGCCGGGGTGTCAGGGAGTTGC GACGCGGTGGATGA >NE2377 BolA-like protein ATGGTTACTGCAGAATCAATCGAGCATTCGATTAAAGCCACTTTACCCTG CACCTGGATCAGGGTAGAGGGAGATGACGGTCATCATTTCAGTGCTGTGA TCGTCAGTGAGTCGTTTCAGGGAAAAAGTATCGTCGGGCAGCATCAACTG GTTTACCAGGCACTTGGCGAGCGGATGCGTGAGGAAATTCATGCCCTGTC AATGAAAACCTATACTCCCGAACAGTGGGAAGCGGCCAGAACCTCGAATT GA >NE2486 Sigma factor, ECF subfamily ATGCCATTTCTGTTATCTGGTCATCTATCAGACCAGTCTTGCAAGGCGGG TACCTTACCCTATAAAATAAGAATCGTTCTCATTTTATTTTTGTGTCCGC ATATGTGCCTGACCAATGACGAGGGGAGCGCTGTGCCGGCCACTGACCTT GCAGCACACCAAATCCATATTCTGTATACCGACCATCACGGCTGGCTGTA TAACTGGTTGCGCCACAAACTGGGCAATGCCTGCGATGCTGCGGATATTG CGCAAGATACGTTCATGCGCATACTTACCCGGCAACAGCCTGTGCATCTG AATGAGCCGCGCGCTTATCTTTCTACCATTGCGCATGGTCTGGTTATCGA TCACTGGCGTCGGCGTGAGCTGGAACGGGCCTGGCTGGAAACGCTGGCGT CATTGCCGGAGCCTGAAGCGCCTGCACCCGAGACGCGGCTGATCTTTCTG GAGGCATTGATCGAGATCGACAGGTTGCTCGATTCGCTCAAACCCCGGGT ACGTACCACCTTCCTGCTGGCCCAGCTCGATGGGCTGACCTGCCCGCAAA TTGCCGAGCGCCTGGGGGTATCGCTATCTACAGTGGAACGCTACATCACC AAAGCGCTGCGCAGTTGCTACATGCTGCGTTTCGAACCATGA >NE2498 hypothetical protein ATGCCAAAAATGGATGTAAAAGGTATAGCAGTAACGGTCTACTCGGAAAA TGCCATGGATTTCATTTCCCTGACCGACATGCTTCGCGCCAAAGACGGCG ACTTTTTTATCTCTGACTGGCTTCGCAACCGCAACACCGTTGAGTTTCTG GGCATTTGGGAGCAGGTGCACAACCCGAATTTTAATTATGGCGAATTCGC CACAATTAGAAGCCAGGCTGGCCTGAACAGCTACAAAATCAGCGTCAAGG AATGGGTCGCCAGGACCCATGCCATTGGGTTGGTGGCCAAGGCCGGTCGT TACGGGGGCACCTATGCCCATAAAGATATTGCTTTTGAGTTTGGCATGTG GATCAGCGCTGAATTCAAAATTTACCTCATCAAGGAATTTCAACGCCTCA AGGAAGCTGAACAACAGCAACTCGGCTGGGACATTCGCCGCAACCTTACC AAGATCAACTACCGCATTCACACAGATGCCATTCAGACAAACCTGATCCC GCCTGCGCTGACGCAAAGTCAGATTAGCTTGATTTATGCCAGCGAGGCAG ACTTGCTGAACATGGCATTGTTCGGGAAAACGGCCAAACAGTGGCGCGAA GAAAACCCCAATAACAAAGGCAATATTCGAGACGAAGCCAATGTTTCGCA GCTGGTTTGCCTTGCCAACCTGGAAACCTTGAATGCCCACTTTATCCATC AAGGGCTGCCGCAGGTCGAGCGGCTAAAAATCCTCAACCAGACCGCTATT CATCAAATGAAATTGCTGCTTGCCGACAGAAGCCTCAAGCAGTTGGACGG AAATTAA >NE0293 hypothetical protein ATGCCTACCATTCATGAAGTTGCCACGCTGACCTCCAAAGGCCAGATCAC GTTGCCCAAATCCATCCGGCAGGCACTTGGCGCCGATACTGGCAGCAAGC TTGCGTTCGAGCTGCGTGGCGGCGAAGTGATCGTTACCCGTGCCGATACC GGGCACGAGGATCCCGCCATTGCTGCATTCCTGGCCCTTCTGGCTCGCGA TATCGAGGCTGGCCGGAACATTCGTGGTTTGCCGGAAGATCTGATTCGCA CGATGCTGGAGCATACGGGCCACAACGTAGTCCTGGGCGATGATTTCGAT GAGGACGTAGAAATCTGA >NE1992 Sigma factor, ECF subfamily ATGACGAAATCCAGGTTCACATCATTATCACAAGCAGTAGAAGCTTACTA TGATGAGCTCCGGCAATTCATCCACCAACGTACCGGTTCATCCCTGATGG CGGAAGATGTGATCCAGGAAACCTGGATTCGCGCCAGAACCACTTCTGCT GATTTACCAGACAACCTCCGTGCCTACCTTTACCGCATGGCGGGTAATGT TGCCGTAGACCATGTTCGCCGTCAAAAGAACTGGGGGCGGGAAGAAGGTG ACAGTTACGAGGCTGAGAATAGCAATGAACATCTGGATCAGTTACCCGGC CATACACCCGATCTGATCGATGCGATCATTTCTCAACAGGAATTAGCTAT TCTCGATGCTGCAATACGCGAGTTACCGGATAAGTGCCGCGAAGTATTCC TGCTCTATCGCGGTCACGGCCTGAGCATGCGGGAGGTAGCCGTCCACCTG TCCATTTCTGAAAAAACTGTCGAAAAGCACGTTGCCCGTGCCATGCTACA CTGCCGGCAGCGATTGCGTGACGCTGGACGAAACGTCTGA >NE0300 Bacterial regulatory proteins, TetR family ATGACGATAAATAATGATCCGATGCGTGATGCAATCGTCGATACGGCAGT GGAGCTGGCTGCTCATACATCCTGGGAAGCGGTGCGGTTGTACGATATAG CAGCCAGGCTGGCTGTTTCCCTGGATGAAATCCGATTGTATTTTCGTGAG AAAGATGAGCTGATCGATGCCTGGTTCGACCGTGCTGACAGTCGTATGCT GAAGGAAGCCGAATCTGCCGGTTTTCTCGATCTGGTTGCGTCTGAACGTA TCCATCATCTCATCATGATCTGGCTGGATGCACTGGCGGTACAGCGCAAA GTAACCCGGCAGATGATCATGTCCAAGCTGGAATTCGGGCATATCCATAT TCAGATACCTGCTGTCATGCGTGTCAGCCGCACCGTGCAGTGGGTACGTG AGGCAGCACAGCGTGATGCCACATTCATGCGGCGAGCATTGGAGGAAAGC ACGCTGACGACTATTTATCTGATGACTTTCTTTTTCTGGATGCGGGATGA ATCAGAAAACTCGCGCCATACCCGCCAGTTTCTGAAGCGCCATTTGACCA TGGCTGCCTGGCTGGGTCAGAAGGTGTATGGTAAAGATCCCGAAAAAAGT ACAGTGCCACACAAACAGCAAATTCCGCTGCAGTTCGATTAA >NE1946 Bacterial regulatory proteins, TetR family ATGCTGACAACCATGGCCGAAAAAATTTCAGTTGAGGAAAAAATCCTGCA AACGGCACGTCGCCTGTTCTGTCAGGTGGGCATTCATGCTACAGGAATCG CAAGAATCATCGAGGAATCCGGTGTATCCCGGCGCAGCCTCTATACCCAC TACGGTTCGAAGGAGAATCTGCTCAAGGCCGTATTTGAGGCGGAGGCAAA TATATGGTTTCGCTGGTTCGACTGTGATCTCCCACAAATGGAATGCTCAC CAACCGAGCGTATTCTGGCACTGTTCGATTTAATGCGTGACTGGTTCGAC AGTAAAAATTTTTACGGCTGTGTATTCATCAATGCCGTCGCCGAACATGA AAAGAGCAATGGCTGGATACAGGAAGTCGCCAACAGCCACAGAGAGAAAA TCACTGCCAAGCTTCAGGCAATGGTAGCAGCAAGTGGTGCACAGAATCCT GAAATGGTCACGGAAAAACTGAACCTGCTGATCGATGGCACGATTGTAAC AGCCATGGTTACCGCCAACAGTGAAATTGCCCATATAGGCAAACTGGCTG CGGGGGATATTCTGCGCAACGCTCAATAA >NE1821 conserved hypothetical protein ATGAGGCTCGATTTGAGCGAGAAATATCATACGAAGACCCTCGGACCACG GTCGGCACAGCTCATCACGGAACTGCACGAGCTGCGCAAGAGCACGTTCA CCGTGGCGGACGTGCGCACGATCACGGGGTTGTCGCCGACCGCGGCCCGC ACGCTGGTCCACAAGGCCCGGCAGCGCGGCCTGGTGACCCGGCTCAAGCC GGGTCTGTACAACCTCGTGCCGTTCGAGCTGGGGCGGGCCACCGAGCATG TCGACAGCCCCTACCTGATCGCACGCGAACTCGCGGGCGAGGCCTCGTAT TTCCTGTCGCACGGCACTGCCTTCGAGCTGCATCGCATGGTGACGCAACC GAATTTCACCGTGTACGTGTCCTGCACGCGGCGCGTGCGCCCGCAGACGG TGGGCGGCTATGACTTCCGCTTCGTCCACGTCACCCCCGAGCAGGTCTTC GGCGTGACGAAGCACTGGATCGACAAGGAACGCTTCGTGGCGATCAGCGA CATCGAGCGCACGATCCTCGACGGTCTGCGGCACCCGGCGTTCGTCGGCG GCATCACCGAGGTCGCCAAGGGCCTGTGGATGAAGCGTGCCGAACTCGAC CTGCCCCGCCTGGTGGAGTACGTGCGCCGCCTCGACGTGGGCGCGGTCGT GCGCCGCCTCGGCTACCTGCTGGAGCACTACGGCCTGGGCGACGCGGCGA CGCTGGAATCGCTGCGCGGCATGCTGACCGCGACCTACCAGCGTTTCGAT CCCCTGCTGCCGGCCGAAGGCCCGTTCGTCTCGCGCTGGCGCCTGCGGCT CAACGTGACACCCGAAGAACTCGACGCAGTGAGGCTCGGCTGA >NE0383 conserved hypothetical protein ATGATCGAATTTACCGCGCTGGACGATCTTTCCCTGCTGCGTGAATCCGT CTCGCTGGAGTGCAAGCTCGCCCAGGGCCGGGATGGCAAGGGTGCGTTGC CGGATGATTTCTGGCCCACCTACAGCGCGATGGCCAATACCGATGGCGGC ATCGTGATTCTGGGCGTGCGTGAGCGCAAGGGGCAGTTCGAAGTGGCGGG CATTGAAAACCCGGACAAGCTGCGCACCGAGTTGTTCAACCACCTGAACA ACCGCCAGAAGGTCAGCGTCAATCTGCTGCGGGATGAGGATGTGCGGGCC TGGCCGGTAGAGGGCAAGACGCTGCTGGTGGTGGAGATTCCGCGAGCGCG GCGTCAGCAGCGGCCCGTGTACCTGAGGGGCAATCCGTTGGGCGGCCATA CCTACCGCCGTCTGCATGAGGGTGACCGGCCCTTGCCGGACGAAGACGTC AAACGCATGCTGGCCGAGCAGGTGGAAGACAGCCGGGATGAGCGCATCCT GCCCGGCTACGGCCTGGATGACCTGCACCTGGAAAGCCTGCGCGCGTACC GTCAACTGTTTGCCAATCGCGACCCCTCCCACCCGTGGAATGCGCTGGCA GATCAGGCGTTCTTGCGGCAGATCGGTGGCTGGCGGCAACACCGCGAGAC AGGCGAAGCCGGGCTGACGCTGGCGGGCCTGCTGATGTTCGGGCAGTGGT CGTCGATCACCGAGGCCGTGCCGCTGTGCTTTCTGGACTATCAGGAGCGC CCGGCAGACTATGCCACGACGGTGCAATGGCTGGATCGCATCGTGCCCGA CGGCACGTGGTCAGGCAATGTGTTCGACTTCTACCGCCGCGTCGTGGGCA AGCTGACGGCCGACATCAAGGTGCCGTTCGTGCTCAAGGGCGATATTCGC CAGGACGATACGCCCACGCACAAGGCGCTGCGCGAGGCGTTGGTGAACAC GCTGGTGCATGCGGACTACACGGGCCGCATCTCCGTGCTGGTGGTCAAGG AGCCCGCGGGCTTTGTGCTGCGCAACCCCGGCGGCTTGCGGGTGCCTGCG CAGCAGGCGTTGCAAGGCGGCATGAGCGACTGCCGCAACCGCACCATGCA GCAAATGTTCCTGATGATTGGCCTGGGCGAGCGTGCGGGTTCGGGCATGT CCCGCATCGTGCATGGCTGGCGTGACCTGGGCCACGAATTGCATCTGCGC GAATCCTATGAGCCGCACGAGCATTCGGTGCTGGAGATGTTCTGGGCGAA GGGGCGGGGGGCGACTTTGGCTTCCGAAAGTTCGGAAGAAAGTTCGGAAG AAAGTTCGGAAGAAACGGGCAAAAAGATCCTTCATCTGCTGCGCGAAGAG CCTTCGCTGACCGCCTCGGCACTGGCCCGGCGTCTGCAACTCACGCCCCG AGCGATTGAAAAGCAGCTGGCCAAACTCAAGGCGCAAAAACGCTTGCGCC GCATCGGCCCCAACAAGGGCGGTCACTGGGAGGTGGGGGAATGA >NE0541 Sigma factor, ECF subfamily ATGACAATTACCTATTCCGGCGATGAACTGTTTCTTCAACTGCGCGGTGA TCTGCTGAATTATCTGTGTCGCAAGCTGAGCAAAGATGAAGCAGCCGATA TACTTCAGGAAATCTATCTGCGATGGCGCAGGCAGGATATCTCGAGTATC GAAAACCCGCGCGCCTTCCTGTTTACCGTTGCGCTCAATCTGATCCGGGA TCAGGCACGCCGGCAGGCGCATGTGCAAACCTACGCCAATACCATGCAAC ACCTGTTTCAGGATAAACCTGCGGACTATGATCTGGCACAGCATTGTGAC GAACGCAGACAAATAGAATATCTGCAGCAGGCTCTGGATCAGTTGCCGGA AAATGTACGCCATGCTTTTCTTCTTTTTCGCCTCGATGGTTTGACATTTG CTGAAATCGCACTGCAGATGGGTATTTCAAGCAAATCCGTGGCACGCTAC ATTCAGCACGCCAGCGAGCACTGCCTGACTGCTCTTGCGCAATATCGGTG A >NE0128 probable sigma-70 factor, ECF subfamily ATGAAATACTTGCTGGAGCCTGCTTTGAGCGTTAATCCCATCCATTCTGA CTCGATTACCGAGCTGTATCAGGACCATCACGGCTGGCTCCATGGTTGGT TACGCAAAAAACTCGGGTGTTCTCATCAGGCGGCTGATCTCGCGCACGAT ACCTTTATGCGCCTGCTCACACGGGAAGAGCCAATTCTCATTCAGGAACC ACGCGCTTTTCTGACTACGGTCGCACAACGGGTTCTGGCGAATCACTGGC GACGTAAGCAGATCGAGCAAGCCTATTTTGAGATGCTTGTACAGCATCCC GAGGCTTCAGTTCTTTCAGCCGAAGAATGCGCCATTCTGCTGGAAACACT CCTGGAAATCGATCATCTGCTGAATCGTTTACCACTACCGGTCAAACGTG CTTTTTTATATGCTCAGTTGGATGGCATGAGTCATGCCGAGATTGCGGCT GAATTGAATATTTCGATTACGACCGTTAAACGCTATCTGATCAAAGCCGG TGCACAATGCTACTTTGCACTGGTAATCGATTGA >NE1071 probable sigma-70 factor, ECF subfamily ATGTGCATGACCGATGACGAAGAGGGCGCTGTGCCGGCCACTGACCTTGC AGCACACCGAATCCATGTTCTGTATACCGACCATCACGGCTGGTTGTATG GCTGGCTGCGCTGCAAACTCGGCAATGCCTGTGATGCAGCCGATCTGGCG CACGATACTTTTCTGCGTGTCATGGCTTCACAAAGGATGCCGGTACATTT GGGTGAGGAACCGCGTGCGTTGCTGACGCACATTGCCAAGGGTCTGGTCA TCGACCACTGGCGGCGACAGGATGTAGAGCGTGCTTACCTGGAAGCACTT GCCCACCTGCCAGAGACAGAAATCCCTTCGCCTGAAACACGACTGCTGAT CCTGGAAGCGCTGTGCCGCATCGAAACCATGTTGCGCGGTTTGCCGGTAC GTACACGGGATATTTTCCTGCTGGCCCAGCTCGACGGGCTGACTTACCGG CAGATCGCTGATCAAACCGGTTTTTCACTCATTACGATCAAGCGACACAT GCGCACAGCCTTTGTCGCTTGCCTGATGCTGGATTGA >NE1103 GCN5-related N-acetyltransferase ATGAGCTTGCAACTCAATCCGCCAGAGCTGCTCGTCGCAACGCATCTTCT GGACGACTTCGAGTGCGGAGTAAACAGTCTCGATGAATGGCTCAAGCGCC GGGCATTAGCCAACCAGCATAGCGGAGCCAGCCGTACATTCGTTGTCGCG GATCACGATAGTCGCGTCTATGGTTACTACGCCATGGCTGCGGGTGCAGT CTCGCATCAAGCGGCAACGAGCGGTGTGCGGCGCAACATGCCCGATCCTG TTCCGGTGATGGTGTTAGCACGACTGGCCGTTGATCAGCGTGCCCAAGGT ATCAAACTCGGGGCAGCATTGCTGCAAGATGCCGTCAATCGAGTGGTAAA CGTTTCGCACAATGTTGGTGTCCGAGCGCTTCTCGTCCATGCGCTCGATG ACCGTGCCAAGCAGTTCTACGCGCACTACGGTTTCAAGGAATCACCCCAG CATCCAATGACTTTAATGCTGCGCCTAAACACGACAAAGGCATAA >NE1634 hypothetical protein ATGGCTAAGGTTGATACCAGGCCAGATCATCACCGGTTGCTGCTGGAAAC GATCGTTCAGCCTGCTTCCCTGACCGGATACGACAATCGGCAATGGGAAT TACTACTGCGGCTGGCGAGACGGGCGCAGCTATCCGGCTACCTTGCAGCC AAACTGGAAAAAGACGGGTTGCTGGATAGTATTCCGGCCCGTGCTTCCAA TCTGTTGCGCTCTAGCTTAATTCAGGCAAGAAAACAGCAGCAATCGGTCA GCTGGGAGCTGAACCGGGTGATGTGGGCGCTGGATGGCCAGGAGATCCCG GTTATCGTCCTCAAAGGAATGGCATATCTGTTGCAGGATCTGCCGAATGC TCCGGGGCGCATGTTTGCTGACCTGGATTTGCTGGTGTCGAAAGAGAATC TGGGTCAGATCGAATCCAGCCTGCTGAAGAAAGGCTGGCAGCATCATGCA CTGACCGATTACGATGAGCGTTACTATCGTGAGTGGAGTCATGAAATTCC CGCATTGGTGCATCCTGAACGCAGTGTTGAAGTGGATGTTCACCATACAC TTTCTTCACCGTTGGGCAAGCTGAAGATCGATCCACTGCCATTCCGGGAA GCAGCAGTCAAAGTGAAAGATGCAGGTATTTATGTGTTGAGCCCGGAAGA TATGGTGCTGCATTGTGCAGTCAACCTGTTTCAGAACAACGAGCTGGCCG ACGATCTGCGGCATCTGCTCGATTTTCACGAGATGATGCTGTTTTTCAGC AGTCAGCAGCCGTTTTTTCAACAAAAGCTGATCGAGCGCGCTAATCAGCT CGGATTAGGAAATCCGCTGTTTTACAGTTTGTATTTCAGTCGCTTATTGC TGCGATCAGCGATTCCGGATGATCTGGAAAAACAGCTCGATCGGCAACCC GGTTGGCTGGCGCGGCGTGTCATGCATCATTGCGTACCGCTGGCATTACT GCCGCAGCATCCTGATCACCCTTCCAGGATGGCGGGATACGCGCGTATGT GGCTTTACTGGCGCAGCCACTGGCTGCGCATGCCGCTTTACCGTCTGGTA CCGCACCTGGCCTATAAGTTTTATCTGTCCGTGTTTCCGGCCAGGGCTGA AACATCAAAGTAG >NE0557 possible sigma-70 factor, ECF subfamily ATGATGGCTGTTCTTCATCGCTCATCCGATATCATCGCTGCGACAATTTG TCGCATTCTCATTCCTCAGTTTTATAGTGATAATACCGTACCGATCAACG GTAATTATTCCTGTATTTTCTTGCTGTCATACATGTTTCCACTGGATTCT CCTCTTCTGGCAGACCTTTACAAAAAATATCGATCACGCCTCATAAGCAG AATTGCACGTTTGACTGGCTGCCGTGAAACTGCTGCCGATCTGGCGCAGG ATGCCTACATGCGGTTGCTCGACCAGACCGGTGTGGCATGTCCTTCCAAT CCTGCGGCTTATCTGTTCCGGATTGGACGTAATCTGGCTATCGATCATCA ACGCAGACCGGATTTTCGGCAGCATGACGAAACTTCGTTCGAGGAAGAGT TACCTTCTTCTTTTTCCGGGCTGGATCAGCAGGCGGTCTATCGCCAGGAA TGTGAACAGTTATGGACGGCAATCATGGAATTGCCTCGTCCGGTCAGTCG CGCATTGGTACTCAGTGTAATCGAAGGGGTCAGCCAGGCTGCCATTGCTG AAGAGCTTGGCGTAACCGAACGTACCGTACGCCGGTATATCAGCAAGGGG ATGGCACATTGCCAGCGGCGTCTGCGTAATCCGTTACCACCAGCACGTTA CGACCGCTGA >NE2106 hypothetical protein ATGAACATTGAGCGAAAACAAGCCAAACAAAAGGAAATATCATCCGGACA TTCTTTCCTGGAATGGGGCATGACGATCCTGAAAATGCCTCCGGCTAAAA GGATTAAGATGGTGCGAGATGGAGTAAAAGTAACTCATTTAGTTGGTGCC GGGCGGTACTACGGTATATCTCAAGCAAAACTTTCAAAGTTACTTGGTAT CTCTGATGCAACCATTACCAGAAAGATCAGATCGAGCGGAAAACTTGGTC CTTTGGAATCCGAGAGATTGGCACGAATTGCACTAATCGAGGCCGAAGCA GAAAAAGTTTTTGATTCTTCAGATCTGGCGAAGCGTTGGATGCTCGAATC TAATCTGGCTTTGGGCGAATCCCCTCTATCGTTACTTGATACTGATATGG GTGCTGATGAAGTAAGGAAAGTTTTGGCTTCCATTGCTTATGGAGGCATT GCCTAG >NE0547 Sigma factor, ECF subfamily ATGCCAGCAGGCCTTTCTCTGCGACAATTTGTCGCATTCCACCCTTATGG CAAACACAGCATAATCATGCTCTTTTTAGCCCATTATGCCTTGCTGTCCA TGACCACCAGTTGTACCAATGATGAACTGTTCCTCCAGTTACGTAATGAC TTGCTGAATTTTCTGTATCGCAAGGTGGGGAGAGATGAAGCAGCTGATAT GGTCCAGGAAGTTTATCTGCGCTGGCGTAAACAGGATGTTTCATCCATCG AAAATCCTCGCGCGTTTTTGTTTACGGTTGCGCTCAACCTGATTCGTGAC AGCTCACGCCAGCAAATTCGTGTGGACAAACATACCACCGAAATACAGAA CTTCTTTGAAATCGGCAATGCTGCGGACGATCCGGCACGACGTTATGACG GCCAAAGACAACTGGCAAGTTTGCTGCACGCATTGAATCAGCTACCGGAA CCGGTAGGCCATGCATTTCTCCTGTTTCGTTACGATGGTATGACTCATGC ACAAATTGCCAAACAACTGGGCGTTTCCAGCAAAACAGTGGAACGCTATA TTCAGCGTGCAGGTGAACATTGTCTGGCTATACTGGCAGAGTATCGGTGA >NE1587 Helix-turn-helix motif ATGGATATCAAACCAATCAGAACAGACACCGACTACCGCACAGCACTAAA GGAAGTCGAAATGCTTATGACTGCAGAACCCAACACACCCGAAGGTGACA AACTGGATATTCTGGTAACACTGATCGAAGCCTACGAACAAAAACATTTC CCACTTGATCTGCCTGATCCTGTTGAAGCCATCAAATTTGAAATGGAACA GAAAGGCCTGACTGTAAAAGATCTGGAACCCATGATTGGAAAAAGTAATC GCGTATACGAAGTTCTAAACCGCAAACGTTCCCTGACACTCAGAATGATT CAGAGACTTCACCATGAGCTGGGTATCCCTGCTGAATCTTTAATAAAACG ATCTTCATATACACACATTTAG >NE0818 putative sigma-70 factor, ECF subfamily ATGCCCCGTCACCGTATTTCCGGAATAAACTGGCTCGCTCATTACAATGA GCTGATCCGGTTCTGGACACGCAAAACAGGTTCTCGCGGTGATGTGGAAG ATGCGACGCACGACGTCATCACCAAACTGCTGGAAAGCAACGTCTCCACT ATTTCCAGCCCGCGCAGTTATCTGCACAGCAGTATCCGTAACCGACTGAC CGATAGTTACCGGCAAAATAAAATACTGGATCTGGTACCGATTCATGATT TACCGGAAGACAGTCATCCTCTCCAGCCGAACGATCCGGTAACGCACACC TGTACCATGCAGCTGTTAACTGCACTGAAGGAAGCCCTGCAGGAACTCCC CCTGAAATGTCGTCAGGTCTTCATCTGGCACCGGCTGGAAGGATATTCCC AGACAGAGATTGCTGAAAAACTGGATATCTCGGTCAATATGGTCGAAAAA TACATGATCAGAGCCACCCGCCATCTGCGTGACCGGTTACAGGATCACAT CCCGGACTGA >NE2256 GCN5-related N-acetyltransferase ATGTCCAGTTACGAAATGTTTGCTGATAAAAATATTGTAGCCGGGGAGCT TGCAAACCTGATGGCCTCCGCAGGCTGGGGTACGGAAGGGGATTATGATG CTACAGCCATTGAAAAGTCGCTGTCAGCTTATCCGATGATTGCCTATTGC CGAGATTCTGACGGGCTGCTTGTCGGGTATATCAGTGCGTTCACAGACGG TGCGTTTTCAACCTTTGTGGGAGAGCTTGTCGTTCGGCCGACATATCAGC AGCGAGGAATAGGTTCTGCCCTGTTAGCCATGATCGTTGAGAAGTGCCGC GGTGTGCCGGTATATGCCACCCCGTTTCAGGGCACAGAGAAGTTTTTTCT TGACAGAGGTTTCCGTGTACCCGAGCGGCCGATGTCGGTAGTCTCGATGC GTAACGTGACATAA >NE0722 AraC type helix-turn-helix ATGATTGGGCGGCGAGAGCCCTACATCCGTCCGAATTGCCTGTTTGGATT CGATGATCTCGTCCATTCATCCGGTGGTGATCTCCATACCCTGGCCGACC AGGCAGGGCTGCCAAGGGAAGCGTTCAGCAATCCCGACATACTCATCTCC TGGCCCCGCCAGGGTATATTCTGCGAACTAGCGGCGCAGGAACTAGGACG TCCGAACTTCGGCCTGGATCATGCTTTTTCGCTGCCGAATACTTATCCCA CCGCAGGAGCAGCAATCTTTCTTTCACAGATCACGCACACCTTTGAAGAA TGGCTTGACGCATGCGAGCGCTACGCGCGCTACTACACGAATGCCTGGGT TCCGTTACTGATCAGGGACGGCGGCCCGTTCGCATACGTGCGGCTGTTGA AGGATCCCCTGGCAAAATCCCCGCGCCAGCAGACAGAAGGACTGGTCGCT ACATTCTACCGAATGGCCAGAACCGTGATCGATGCTACAGATGAAAAAGC CCATCTCATCCGGTTCCGCCATGCCCGTCCTTGTGACACGCAACCGCATG AAGCACTTTTCGACTGCCCGGTCGAGTTCGAAGCTGCGCACAACGAGCTC GTATTCCCGCATGAATATCTCAATCGACCGACCAATGGTCGCCTGGCCGG ACTCGAGCCATTGCTCGATCTCTATCTGCGTTACCGGATTGCCAAGATGC CGCTCTATGATCAGTCGGTCGCGGCAACCGTCGCCGCTGGCATCCCGATC GTGCTCAATACCAGCCTGTGCAATCTCGAGTACTTCGCGGTATCGCTGGG ACTCAGTCCAAAGAAGCTGCAGCGCCTGCTGCAGCAGGAAAACACCAGCT TTTCGGCGATCCTGGACAAGGTGAGGGAATCACTTGCATGCGAGATGCTG GAAACGACCGATGTTCCCATCAGCAACATCTGTGGCCTGCTGGGATATAC GGCACTCCCGGCGTTCAATCTCGCCTTCAAGCGCTGGATCGGCGTGGCGC CGAGCATTTATCGCGAGTTTAATCGCAGGAAAGAAAAAGATTGTGACTCA TGA >NE1114 Bacterial regulatory proteins, TetR family GTGCCAGGAAAAACCAGGGAAGATTCACAACGTACACGCGATACGATTCT GGATGCAGCGGAACAGGTCATTTTATGCAAAGGGATGGGACGTACGACCA TGGGAGATATTGCCCATGCTGCCAATGTTTCACGCGGAGCCGTGTACGGG CACTATAAAAACAAGATAGATCTGTCGATCGCTATGTGCGAACGGGCCTT CGCGTCGATGGAAATACCTGTCCGGATTAAAGGGGAATCCGCGCTGCAGA CACTGTACCGGGAAGGAATCTATCTCCTGCGTTTATACTCGGAACCAGGG CCGGTACAGCGTGTACTGCATATTCTGTACCTCAAATGTGATGAAAGCGA GGATCATCTCGCCCTGCTCGATATTCGAAACGAGTGGGAAGCGCAGCGCA TGGCCGATACAGAAGAACTCATCATTGAAGCTGTCGCCAATGCCGAGCTG CCACAGACTACCGATATCAAACTGGCCAATTTGTATCTGCATTCGCTGGT TGATGGCATATACAGCACCTTATTCTGCACGAACCGTGTTCCTGAACATA AATGGGAAATTGCCGAGAAACTTTATCAGGCGGGTTTCGCCGGGTTGAAA ACCCTGGAGAATTAA >NE1350 conserved hypothetical protein ATGACTGCTGCTACTCTTACCAGCAAAGGACAAATCACCATTCCAGCAGC AGTTCGCGCTGGTTTAGGCATTGATGTGGGAGACCGGGTAGAATTTATAG AAATTGAACCAGGACGCTATGAAGTAATTGCTGCAACACAATCGGTGAAG GCGCTCAAAGGTATTATCCGTAAACCGAATCATCCCATATCAATAGAGCA GATGAATGCCGCTATCGCCCGTGAAGCGGTAAAGTCGGTTCGATGA >NE2153 conserved hypothetical protein ATGAAATCTGCCTTGTCGTTGCTGGGAGAACGCCAGCAATCCCTGCTCAC CGCCCTGCTGCATCATCGTAAAGGGCTAACGGTAGAAGAATTATCCAGTC TGCTGACTATTTCCCGTAATGCCGTCAACCAGCATCTTACTCATCTGGGC AGCAGCGGTTTCATTCAGAGTGCCTTGCAGGAAAGCACTGGCGGCAGGCC GGGCCGGGTATACACGCTGACACCCAATGGCCTGGAGCTGTTCCAGCGAC GATACTCATTTCTGGCAAAGCTGCTGCTTTCCTGGATAGACAAAAACATG GGCGAACATGAGCTTGATGTTTGTTTGACCGAGCTTGGCAAAGAAATGGC AAGCGGGCTGGAACATCGCCTTACGCAGCATACCTCCCGCAGCGACAAAC TTCAGGAAGCCATTACCATCATGAGCGAGCTTGGTTACGATACCGAAATA TATCGGATATCAGAAAATCAGGCAGAAATCGTTGCAAATAATTGTGTTTT TCAGGAACTCGCCCAGCAGCATCAGGAATTTTGCAAGCTCGACATCAGTT TCCTGAAGCATCTGCTGAAAGCCGATATCGAACATACGGAATGTATCGTC AGAAATGGAAAATATTGCCGCTTCAGAATAACCAGCCCTGACGAATCCGG ATCCTGA >NE2514 conserved hypothetical protein ATGTCCAACGAACAGCTTGCAGACCTGACCCAGCCCCAGCGCGACCGACT TGCGTTTATCGAGTTGCGCCTGCGCTTCATCGGAGAGATTCGCCGCCAAG ACCTGGTGTCGCGCTTTGGCATCCAGGCGGCAGCGGCAACCCGGGACATC GGAATCTACAAGGATCTCGCCCCTGGCAACCTGGATTACGACACCAAGAA CAAGGTGTACGGCTACGCGGATGGATTCACGCCAGTCTTTGATTTCCCTG CAGAGCGGGTCTTGGCGTGGCTCTCACAGGGTTTCGGTGATGGCGAGCCT TCGGCCCTCAAGTCCTGGATCACTTGTGAGATTCCTTCCAGACTCACAAA GCCAGGACTCGACACGCTCGCTTGTGTTACTCGGGCAATCCATCAGGAGC GCCCGCTGAAAGTCACCTACCACTCCTTGTCGAGCGGCGAGACTGAGCGC GAGATCGTCCCGTTTGCGTTAATCGACAACGGCCTGCGCTGGCATGTCCG CGCCTTCGATCGACGCAGCAAGGATTTCCGGGACTTTGTCATCACGCGCA TGCAGCGTTCCGTGATGCTGAAAGACAGCCACGTCCTGCCCCACGAAAAA AGTGACCAGGACATCCAGTGGACGCGGATTGTGGAGCTGGAGCTGGTGCC GCACCCGGACCAACCGCGCCCCGAGATCGCGGAGATGGATTACGGCATGA CCGGCGGCATGGTGAAGATGAAGCTCCGTGCAGCGACTGCTGGCTACATC CTGCGCAAGTGGAGCGTCGACTGCTCCGCAGACCATAGCCTTCGCGGGCC TGAGTACAGACTTTGGCTCAAGGACCACTTGGCCTTGTATGGCGTCAAGA ACGCCGTGCTGGCGCCAGGGTATGCGCCTTTGGATGCGGCCCGCGCGGTA GCGGATTGTGACTAA >NE1519 conserved hypothetical protein ATGAAACTTTTTAAGAGCATACCTAACCCGAAAGAAATTCGTCAGAAACT GGGATTGAATCAGCATGAGTTCTGGAGCAAGGTGGGCGTCACCCAGAGCG GCGGTTCGCGCTATGAAAGCGGACGGGAAATGCCGAAAGCAGTGAGAGAG TTATTGAGGCTGGTCCATATCGAACATATCGATCTGACTAAAATAAAACG GGATGATCTGATCGTTGCGGCAATGCTGAAGGCTCAGTATCCCGATTTGT ATAAAAATCTCAAGAAATCAGCCAAACAATTGAAATGA >NE1224 hypothetical protein ATGCAAGTTACTGACAAAGGACAAGTTACGATCCCCAAACGCCTGCGCGA TGCTGCCGGCTTTCTGCCCGGCAGCCAGGTCACCTTCTCGTTGGAAGGAG GAAAGATCATCATCAGCAAGACCGGCATGGGAACTGACGACCGACGTAAG TCGCTGCGCGCTGCTGCCGCAAAGGTACGCAAAAGCCTGGATGAGCCATT CAAGCAGATGAACAGCGACGACATCATGGCGTTCCTGCGCCCGGATGGCG ACGATTGTGCATGA >NE0514 possible baeR; Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain ATGAGCCGTATTCTGATCGTCGAAGATGAACCCAGGCTAGCCAGACTGGA AGCCGATTATCTGCAGCATGCCGGTTTCCAGACTCATTGCCTGAGTCAGG GGCTAGAAGTGATCCCCTGGCTGAAGGAAAATACTGTCGAACTGATATTG CTGGATCTGATGGTACCGGGGCGGGATGGTCTCGATATCTGCCGCGATAT TCGCAGTTTCAGCCAGGTGCCGGTCATCATAGTGACCGCACGAATCGAGG AAATCGACCGTTTGCTGGGACTGGAAATGGGAGCGGATGATTATATCTGC AAGCCTTTCAGTCCCAGAGAAATGGTTGCACGCGTCAAGGCTGTGTTGCG CAGACTGCAGCCGCCCGCCCCGAACTCGGCGCAGCAGGCGCTCACACTCT CCCCTCAAAGTTTCAAGGTCCAATACGATGGGCGAGAAATCGAGCTGACT GCCGTTGAATTTCAGTTGCTCTATACGTTATATCAGCAACCGGGGCGTAT TTTCTCGCGCGCCAGACTGATGGATCTGATCTATCAGGATCAGCGCATCG TTTCAGACAGAACGATAGACAGCCACATCAAGAAGCTGAGGAAAAAAATT GCTGAACTGATTCCGGAAAAAGAAGTGATCTGTTCAGTCTATGGCGCGGG TTATCGCTATGATCCACAATCTGTCGAGCCCGAAGAATAA >NE1192 Sigma factor, ECF subfamily ATGTTGACAGTTACCGACTACTATAAGGAATTGCTGAATTTCTGCGCCCG CACCCTGAAAGATCGCGATGCTGCGGCTGATCTGGTGCAGGAGGCTTACA CGCGCTTCCTGGTGGCCCAGCGTTCCGGCGCCGCCATCGCGGACCCGCGT GCGCTGCTGTTCCGTACCACGCGCAATCTGCTGATTGACCAGCACCGCCG CGCCGAAGTCCGCATGCATCTGAGCCTGGACACACTGCTGGAAGAAGAGC AACCCCTGGCTCCCAGGCACCTGCAGCCCGAGGAGGTACTGGCATTCAGC CGGTATGCGCAGGCCCTCTACGCGGCTATTGAAAGCTTACCCCGGCGCTG CCGCGAGGCCTTCATCCTCAATCGTTTCGATGGCCTGTCCCACCAGGAAG TAGCCGAAAAAATGGGCATCTCCCGCAACATGGTGGCTCAGCATATCATC CGTGGCGTGCTGGTCTGCAAGGCCTGCGACGACCGTTTTCACGGCCGCGT CGTACTCGCCAGCAAGCCAGCGGAGTAA >NE0186 conserved hypothetical protein TTGGATATCAACATGGCTCATTCCCTGATTTCCTGCGATTTGCACGACTA CATCGAAGTAGCCTGTATGTACAGCTATCAGGTCAGGTTGATTCTGAAAG ATCAGTCAACCGTGGAAGGCAAGGCAAAGGATATTCTGACCGATGCGGAG AAGCGGGAATTTTTGCTGCTTGAAACCGAATCCGGGTCGCAGCAGGTCGA ATTGATTTCGCTCGACAGGTTGCAGGTTCTGACACCCGGTGCACGGTTCA GTGAGGTCGTATTTTCAGACACCTGCGAGCCCTGA >NE1524 conserved hypothetical protein ATGTATAAACTCCGCTTTTTCGCCGATTTTTGCCTTGAACTGACTGCCTC GCTAACGTTTTTCAGAGGTTCCTTAGCATCGATTTCATGTTTTACAGCAG ATTATCGCTATGGAGATATGACCATGGCGACCGTGCGTAAGACCATCTCA CTAACCAACCAGCAAGATGCCTGGATTACCGCACAGGTCGAAGCTGGACG ATTCACAAACGATAGCGAGTTAATTCGTGACCTCATCCGGCGCGAGCAGG AACGAATGGCCGAAATTGATAATATCCGGGCCGCACTCATCGATGGCGAG CAAAGTGGGGAACCGCAGCCGTTCGATTTTGATCAGTTCAAAAGACACAA GCTGGCGCAGCACAAACCAGGTTAA >NE1668 DUF179 GTGAAACCGGAAGCAAATTCTTATCTGTTCCAGGATGGTGTAATCGTTAT GCAAAGCATCAACCTTACCGATCATTTTCTGATTGCCATGCCGGGGCTGG AAGATTCTTTCTTCGCAAGGACACTGACCTATATCTGTGAGCATAGCGAA CGTGGTGCACTGGGTCTCGTGGTCAATCGCCCGACGGATTTATCCGTGGA AAACTTGTTGCTGCAACTGGGGATGTTTCCCAAAGGTACAGCTTCTTCCA ATCTGCCGGTATTGCTGGGTGGTCCGGTGCAGATCGATAGTGGATTCGTA TTGCACGAACCGGTCGGATCGTGGAAATTTACGCTGTCTTCCAATGAGTC GATCGGTTTGACTTCATCCGCCGACATTCTGCAGGCAGTTGCCGATTGCG AGGGCCCGAAGAGAATGCTGATAGCGCTGGGTTATTCAGGATGGGCAGCA GGGCAGCTCGAGCAGGAGCTGGCACAAAATGCCTGGCTGACGGTACCCGC CGAATCGCAGATACTGTTTGAGTTGTCTTCTGAAGAACGGCTGCCTGCCG CCATGAAGTTGCTGGGAATCGATTTTTGTAATTTGTCCAGTGAAGTCGGT CATGCCTGA >NE2459 birA, putative BirA bifunctional protein TTGAATACATCTTCTTTGCTGCTGGCGGTTGATTCGGGTAATACCGCCAT CAAATGGGGATTACATGACGGTCGACAGTGGCTGGCGCATGGCAAGACAT TACAAAGCGAACGCAGGATGCTGAAACAAAACTGGACTGCGTTGCCAGCA CCTGCCTCCATTCTGATTGCCAATGTGGCTGGATTACAGGCGGCAGATGA TTTGAAGGCATTGCTGGCGCCATGGCATGTACACCTGGAGTGGGCCACAG CCAGTGCCCGTCAGTGTGGTGTCATCAGCCGTTATAGCAACCCGGCGCAA TTGGGCTGCGACCGCTGGGTAGCACTGATTGCTGCATGGCACCGGTTACA ACAGGCATGTCTGGTCGTGGATGTGGGCACTGCCATGACGGTCGATGCTT TGTCTGCCTCGGGTGAATTTCTGGGCGGCGTCATTGTGCCTGGCCCCGAT GCGATGAGACAGGCATTGGCAGATCGTGCCGGAATATTTTCCATGCCACT ATCCGGTAGTTTCCAGAATTTCCCGATCAATACCGGAAACGCCCTGTATA GCGGGATGATTCAGGCACTGACCGGCGCAGTGGAGCGAATGTATGACCAG CTTTCCGAATACACGGGAAAACAAATGGTTGTAGAAACCATCCTGACGGG TGGTGGCGCGGCGTTGCTGGCTCCTCATATACATATCCCTCACCAGATTG TCGATGATCTGGTACTGGAGGGGCTGGTCATTATCGCCGGGGCGCAAGCA GAGATACCGGCAACCCGTTAA >NE1922 cbbR, rbcR, Bacterial regulatory protein, LysR family ATGCTGCATATCACCTTACATCAGCTGAAGATCTTCGAATCAGTAGCACG TCTCCTCAATTTCACACATGCTGCAGAAGAACTTCATTTGACTCAGCCGG CAGTTTCCATCCAGATCAAGCGGCTCGAAGAAATGGTTGCACTGCCCCTG TTTGAACAAATAGGCAAACGCGTCCATCTGACCGAAGCCGGCAAGGAACT TTTTCATTACAGCCGGGGTATTACGCGACAACTGGCCGATATGGAACTGG CACTCGATGAGCTGAAGGGGCTGGAACGAGGAAAATTGAGCATTTCGGTG GTTAGTACCGCCAACTATTTCGTGCCAAACCTACTGGCCAAATTTTGCCA GCGCTACCCTGGTATTACCATTAGCCTGCATGTTTCCAATCGCGAGAATG TACTCAAGCAGCTGTCGGACAATATCATGGATCTGGCAATTATGGGTCAG CCACCCGAGGGGCTGGATATTACTTCCGAGTCATTCATGGAAAATCCACT GGTCATCATCGCCCCCCCTGAACACCCTCTCTGTGGCCAGAAACAAATTC CGGTCAAACGACTGGAGCAGGAAATTTTTCTAGTCAGGGAACCCGGTTCC GGCACGAGAAACGCGATGGAGCGATTCTTTGCTCACGAAAAAATCAGTAT CCAGAAAGGAATGGAAGCAGATACTGCAGAAGCCATCAAACAAGCCATAC AAGCCGGAATGGGGCTGGGAATCATGTCACTCCATACCATCAGATTGGAG CTTGAAGCTGGGCGTTTAAAGATTCTTGATATTCAGGGGCTTCCAATCAT GAGGTACTGGAATGTCGTCCACCAGAAGAACAAACGCCTCTCCAATATTT CCAGTGTGTTCAAACAATTTTTGCTGAATGAAGCGGCTGATCTCGTAGCA CTCGAATACCCGCACCGCAATACCACATGA >NE0572 cbl, Bacterial regulatory protein, LysR family GTGAATTTTCAGCAACTCCGCATCATCAGTGAAACAATTCGGCAGAATTA CAATTTGACGGAAGTGGCCAATGCCCTGTTTACCTCGCAATCCGGGGTCA GCAAGCATATCAAAGATCTGGAAGATGAACTGAACATCGATCTGTTCATC CGAAAGGGCAAACGCCTGACCGGACTGACCGCACCGGGCAAGGAACTGGT CAAAATCGTTGACCGCATTCTGCTGGATACCAGAAATATCAAACGACTGG CAGAACAGTTCAGTCAGCATGACCAGGGTGAACTGACCGTGGCTACCACC CACACCCAGGCACAATACGCCTTACCGGATGTTGTTAGGCAATTCAAGGA AATATTCCCAAAAGTACATCTCGTACTTCACGAATCCAGTCCCGGCGAGA TCGTATCCATGCTGCTGAATGGCCAGGCGGATATTGGCATCGCAACCGAA GCGCTGGAGAGTACTTCTGAACTGGTATCGTTTCCGTACTATACCTGGCA TCATGCGATCATCGTACCGGCAGAACATCCGCTGCAATCGATACACCCTC TCACACTCGAAGCTGTTGCGCAATTTCCGATCATTACCTATCACAAGGGT TTTACCGGGCGTTCCCGAATCGATCAGGCGTTCTCTCGCGCGGAATTGAC ACCCAATATCGCCATGTCCGCTCTCGATGCAGATGTCATCAAAACCTATG TCACTCTGGGTATGGGAATTGGTATCGTTGCATCTGTCGCATTTACACCG GAACGGGATACAAAACTGATCAAACTGGATGGTTCTCATCTGTTCGAGCA GAATACCACCTGCATATCCATACGACGTAACCACTATCTGCGCGGATACG CCTACCGGTTCATCGAGCTGTGCATCCCTTCACTGAGCAGAGATACCATC TGCTCAGAAATACAATAG >NE1731 cspD2, Cold-shock DNA-binding domain ATGGCAACAGGTACAGTAAAGTGGTTCAATGATTCAAAAGGATTTGGTTT TATTACACCGGACGACGGCAGCGAAGATTTGTTCGCACACTTTTCCGCGA TCAATATGACAGGTTTCAAGACCCTGAAAGAAGGCCAGAAAGTAAGTTTT GAAGTTACGCAAGGACCAAAAGGCAAACAGGCTTCAAATATCCAGTCTGC TTGA >NE1312 cspD2, Cold-shock DNA-binding domain ATGACGACAGGTACAGTTAAATGGTTTAATGATGCAAAAGGTTTTGGGTT TATTACTCCTGACGATGGTAGTGAAGATCTATTCGCGCATTTTTCTGCAA TCAATATGAATGGGTTTAAGACGCTTAGAGAAGGTCAGAAAGTTTCTTTT GATGTAACACAAGGTCAAAAGGGCAAGCAGGCATCCAATATTCAAGCTCC TTGA >NE0854 cysB, Bacterial regulatory protein, LysR family ATGAAACTTCAGCAATTAAAATATCTTCATGAAATTGCAAAACAAAAGCT GAATTTATCCAAGGCAGCAAATGCCCTGCATACTTCACAACCTGGGATCA GCCGACAGATCCAGCTACTGGAACAAGAACTGGGGGTTGAGATTTTCACA CGTCACGGCAAACGTATTATCGGCATTACGCAGCCAGGGCTGGCGATCCT GCAAACTGCTCAGCGGATGCTGCAGGACGCAGACAACCTGAAAAAAATTG GAAATGAATTTAATGATAAGGAAAGCGGTACATTTATTATTGCGACTACT CACACACAAGCACGATATGTACTTCCTCCTGTAATCAAGCGCTTTATCGA ACACTACCCGAAAATCAGGCTGTCCTTACGACAGGGAAGTCCCATAGAGA TAGCCACCTGGGTTTCATCTGGTGAAGCCGATTTAGCTATAGCAACCGAA GCTATCGAATTATTCGATAAACTTGTCATGCTGCCTTGCTACGAATGGAA CCGCTGCATCGTTGTTCCACCCCGACATCCATTACTCCAGCTTAAGGAGT TAACACTTGAATCCATCGCCCAATACGCTATCGTTACCTATGATTTTGCC TTTACCGGCCGCTCCAAAATCAACCAGGCATTCGAATCCAAAGGGCTGAA ACCCAATGTGGTACTGACCGCACTTGATGCGGACGTAATCAAAACCTATG TAGAAATAGGTTTAGGCGTAGGCATTCTGGCAAAGATGGCCTTTGATCCA GTTCGCGATAAAAAGCTACGGGCTATTGATGCCGCACATCTGTTTGAACC CAGCACTACCCGCATCGGCATCTGTCGTAACAGTTACATTCGTCACTATG TTTACGATTTTATCGAGATGTTCGCTGCTCATCTCGACATGGAAACAGTT AATAAATTACTCAAAAACCCCGAAAATCAACAGTTATCTATAGCCAACGA TAAATAA >NE2435 fecI, Probable fecI Specialized sigma subunits of RNA polymerase ATGTTGGATAACAGCATTCCTACCGATTCATGTCTGGTGTCTGGTGCTAC CGTGTCCACGGACATTGAGACCCTGTACTGCAATCACCACGACTGGCTGC AGGTTTGGCTGCGCCGCAGACTGAGCAGTGCTGTTGATGCATCCGATCTG GCGCATGACACCTTCGTGCGCGTTCTGGTTTCGGGCCGCATGCCCAATGC CGAGCAATCGCGCGCTTTCCTTACTCAGATCGCCAAGGGTCTGGCGGTGG ATCTGTACCGTCGTCGTGCCATCGAAGAGGCTTATCTGGCAGCGCTGGCG CAACTGCCGGAAAATCTTGCGCCCTCGGCTGAGGAGCGTGTGCTGGCGCT GCAAGTGCTGTTGTTGCTCGATACTGCGCTGGGCAGCCTTCCATCTCGGG TGCGTGAAGTGTTCCTGCTGTCGCGGCTCGACGGATTGACCTATTCTGAC ATTGCGCAGCGCCGGGGTATTTCTGTCGCGACAGTGCGCAAGTATATGCT GCGCGCCGCGCAGGCTTGCCATTGTGTCTTGAATTCACCGACTGGCACCG CTCCATGA >NE0875 fis, probable factor-for-inversion-stimulation transcription regulator protein ATGACGGTTATCAACGAAAACGAGATTGCACTTTGTATCCGCAGAGCAGT AGAAGCCTATTTCCAGGATCTGGATGGTGAAAAACCATGCCCTATCTATG AAATGGTCATACGCAGTGTGGAAAAACCGCTCATAGAGATCGCCATGCAT TATGCTCAGGGCAATCAAAGCAAAGCTGCTGAATTATTGGGCATCAATCG CAATACCTTGCGCAACCGATTAACCAAACATCAGATCCGGTAA >NE2491 fliA, Sigma-70 factor family ATGTATACCGACACAGGAATCGTTGACAAAGACCAGTTCATTACGGAATT TACACCATTGGTCAAACGGATTGCCCATCACATGATGGCCAGACTGCCGG CCAGCGTTCAGGTCGATGATCTGATCCAAGCGGGGATGATCGGCCTGCTG GATGCCATCAACCGTTATGAAGGTTCTTATGGCCGTCAGTTTGAGAGCTA CGCTGCCCAGCGTATTCGTGGCTCGATTCTGGATGAATTGAGAGAAGCAG ACTGGCTACCGCGCAGCCTGCGCAGAAAAATGCGCCAGATAGAAACCGCC ATGCGTGCACTGGAACAGCGCCTTGGTTACCCGCCCAGTGAACAGGAAAT CGCCAATGAAATGAATCTGCCACTGGTCGAATACCAGGAGATGCTGCAGG AAGCGGGTGGCGGACAACTGATCTATTACGAGGATTTTCAGGAAGACGAA GAAGATCATTTTCTCGATCGTCTACGCGGCGACCAGAGTAACGAGCCGCT GGATCGGCTGCTGGAGAAGAATCTGCGGGAACTGCTGGTGGCCGCAATCG AGAAACTGCCTGCCAAGGAAAAACTGGTCATGGGGATGTATTACGAGCAG GAAATGAATCTGCGCGAAATCGGTAAAGTGCTGGGAGTCAGTGAATCACG TGTCTGCCAGTTGCATACTCAGGCCATTTCCCGTTTACGCACCCATTTGC GGGACAAGTAA >NE1660 greA, Prokaryotic transcription elongation factor GreA/GreB ATGAATATTGTTTTATTGTTTTTCCATGGAAAGAGAAATCAAGTTATGAA TGCCATTCCCATTACCCAAGCTGGTGCAGAGAAATTGCGCGCAGAGTTGC ATGAGATGAAAACGGTCCATCGCCCTGCTGTCATTGCCGCCATTGCGGAA GCACGTTCCCACGGTGACCTGTCTGAGAATGCCGAATATGATGCTGCAAA AGAAAGGCAAGGGTTCATAGAGGGACGTATTGCAGAATTGGAGAGTAAAC TGTCCAACGCACAGATTATCAATCCCGCAACGCTGAATGCAGATGGTGCG TGCGTATTCGGTGCCACTATCGATCTGATGGATCTGGGCAATAATACAAC CGTGACTTATCAGATCGTAGGGGATGATGAAGCCGACATCAAACAGGGTA AAATTTCTATCAGTTCACCCATTGCCCGGGCATTGATTGGCAAATATGCG GGGGATATAGCTGAAGTTCAGGCACCTGGTGGTGTTCGAGAATACGAAAT TCTGGATGTTAAATATATCTGA >NE1848 greB, Prokaryotic transcription elongation factor GreA/GreB GTGAGTAAGGCATTTACCAAGGAAAGTGACGGTGAGGAAGAGCTGGATGG CAACCCGCAGCTGCCGCAAGGCGTAAAAAACTACATTACTCCGGGAGGTT ATCAGCGCTTAAAGGATGAATTCGATCAATTATGGAGAGTGGAACGCCCG GAACTGGTCAAAGTCGTTTCCTGGGCAGCATCGAACGGTGATCGCTCGGA GAATGGTGATTACATCTACGGAAAACGGCGTTTACGTGAAATCGATCGCC GCCTGCGGTTTTTATCCAGGCGTCTGGATAACGCCGAAATCATCGATCCG AAGCAGCGCGGCGAATGTGATCAGGTATTTTTTGGTGCGACGGTAACGGT TTGTAATCAGCGCGGCGAGGAGCAGACTTACAGCATCGTCGGTATCGATG AAGCTGAACCGGGCCGGGGCTGGATCAGCTGGATTTCACCGCTGGCCAAA GCACTGCTGAAGGCACGTGAAGGAGATGTGGTGCCATTGCAGACACCGGG CGGCCCGCAAGAACTGGAAGTAGTGGAAATCCGTTACGAAGCGTTGTGA >NE1477 hrcA, Negative regulator of class I heat shock protein ATGCTTAACGAACGCGAGAAAATTCTGCTAAAAACCCTGGTTGAACGTTA TATTCATGAAGGTCAGCCAGTCGGTTCACGCTCACTCGCCAAGTTTTCCG GATTGGACCTGAGTCCGGCCACGATCCGCAATGTGATGACTGACCTCGAA GAAATGGGGTATGTCTCCAGTCCGCATACATCGGCCGGGCGCATGCCTAC CACGCTGGGTTATCGCTTTTTCGTCGATACCCTGCTGGTGGTCAAGTCAC TGGATAATGAGCAGATTACTTTGCTGGAGAACCAGCTGCATCCGAACAAC CCCACCCATTTGATGAATGTTACTTCTCGTCTGCTTTCAGAGCTGACCCG ATTTGTAGGCGTGGTGGTCACACCTAAACGGATGGGAGGCGCAGTTTTTC GCCATATAGAATTTGTGGCACTGACTGAAAAACGGATTCTTCTGATTCTG GTGACACCGGAAGGTGATGTCCAGAATCGTATCATTCTTACGGAAACCGC TTACAGTCAGTCTGATCTGATCGAGGCCGGAAATTTTCTCAATCAGCACT ATGCCGGTTGTACGCTGGAAGAAATTCGCTCAGGGCTCCAGCGCGAGTTG ACACAATTGCGTCGGGATATGACCGGTCTCATGAATGCAGCAATTGAAAT AGGCAATGATGCCTTGCAGGAAAGCAGCGAAGCAGTGGTAATTGCTGGAG AACACAGGCTGTTTGACGTGCGCGATTTATCAGATAATCTTTCCAGCTTG AAAAGTCTGTTCGAAATGTTTGAGCGAAAATCCAAACTGTTACAACTGAT GGAGCTGAGCCGTCAGGCACACGGGGTGAAGATCTTCATCGGGGGAGAGT CGGATGAAACGATGCTGGAAGAGGTCAGTGTCGTTACTGCACCTTATGAA ATGGAAGGAAAAATTGTCGGCACGGTTGGCGTGATCGGCCCGCGGCGCAT GGCTTATGAACGTATCATTCCTATCGTGGATATTACCGCCAAGCTGCTTT CGAGCAATCTGTCGTAA >NE0838 merD, Bacterial regulatory proteins, MerR family ATGAACGCCTACACGGTGTCCCGACTGGCTGACGATGCCGGCGTGAGTGT GCATGTCGTGCGCGACTACATCGTGCGTGGATTGTTGCGGCCGGTCGCAT GCACCACGGGCGGCTACGGCCTGTTCGACGCGGCAGCCTTGCAACGCCTG TGCTTCGTGCGGGCCGCCTTTGACGCGGGCATCGGCCTGGGCGCGCTGGC GCGGCTGTGTCGGGCACTGGATGCTGCGGACGGCGACGGCGCGGCTGCGC AGCTTGCCGTGCTGCATCAACTCGTAGAACGGCGGCGCGAGGCCCTGGCC AGCCTCGAAATGCAGTTGGCCGCCATGCCAATCGAGTCGGCACGGCAAAC GGAGAGTTTGCCATGA >NE0843 merR, Bacterial regulatory proteins, MerR family ATGCAAACTATTTTGGAGAATCTGACCATTGGCGCTTTTGCCAGGGCGGC AGGGGTCAATGTAGAGACCATCCGGTTTTATCAGCGCAAGGGATTGCTGC CTGAGCCGGACAAGCCCTATGGCAGCATTCGCCGGTATGGCGAGGCGGAT GTGACGCGGGTACGGTTTGTGAAATCGGCCCAGCGGCTGGGATTTAGTTT GGACGAGATCGCAGAGCTGCTGCGGCTGGACGATGGCACTCACTGCGAAG AAGCAAGCAGCCTGGCGGAACACAAGCTCAAGGACGTGCGCGAGAAGATG GCCGACTTGGCACGTATGGAGTCGGTGCTGTCCGAACTTGTGTCCGCCTG CCATCTACGGCAGGGAAATGTTTCCTGCCCGTTGATCGCGTCGCTACAGG GTGACGCAAGCCCGGCTATGCCTTAG >NE1435 metR, Bacterial regulatory protein, LysR family ATGATCGAATTGCGGCATCTCCGTACGTTGAATGCATTACACGAGACCGG CAGCATTTCGCTGGCAGCGCAGCGTGTGCATTTGACTCAGTCCGCGCTAT CTCATCAGATCAAGGCATTGCAGGAGTATTATCAGTTGCCCCTCATTCAA CGCAGCGGTCATGCCGTGCAGTTGACGGAGGCAGGTAAACGTCTGGTAAA ACTGGCGGAGAAAATACTGGGAGAAGTTCAGTCAGCAGAGCGGGATCTGG CAAAAATAGCCCGGCAGGCGGCAGGAAGTTTGCGGATCGTGCTGGAATGT CATACCTGTTTCGACTGGCTGATGCCCATCATGGATGATTTCCGGCAGCA CTGGCCGGAAGTGGAACTCGATCTGGTTTCCGGTTTTCACAGTGATCCGG TAGCGCTGCTCAGACAGGATATTGCCGATGTGGTGATCGGCTCCGAAAAC AGGCCGCAACAGGGGATCGTTCATTTTCCGCTGTTCCGCTTTGAGATTCT GGCAGTGCTGGCGCCAGATCATGTACTCGGTAACAAACGGGTACTGGAGG CGGTTGATTTTGCACAGGATGTATTGATTACCTATTCGGTCCCCGAGGAA CGGATCGATCTGATCCGGCAGGTGTTGATTCCCGCTGGCGTCAGCTGGCA GCGGCGAACGACCGAGCTGACCGTGGCCATTCTGCAACTGGTGGCGAGCC GGCGGGGAATTGCCGCGTTGCCCGGTTGGGGCATCAAAAACTATCTGGAT TACGAGTATGTGATTGCCAAACGTATCGGCACCCGTGGATTGTGGAGCGA TCTGTACCTTTCGGTGCGGGAAGAGGATGCCTCATTGCGTTATCTGCAGG ATTTTCTGGAGACTATTGGTCAGATCTGCTTTGCCAGGCTGGATGGAATC AGGCCACTGAGCGGGAAAAGGAAAGAGAAAAAACGAGAGGCCAGAAAGAC GATCGGGCAGTCATCTCCGGTTTAA >NE0008 mfd, mfd: transcription-repair coupling factor ATGTCATCCAAACTCAATCCACTTTCTTCGGAATCGCTGCCACGTTACAC CGGTCTGGAAGGTTCCAGTGATGCCTGTGCCCTGGCGCGGCTGGCAAACC GGAATCCGGCTGGGCAGTTACTGGCGGTCATCACAGCCAGTGCACTGGAT GCACAAAGATTGCTCGAGGAAATTCCCTTTTTCGCGCCCGATTTGCGCGT GAGCCTGTTGCCGGACTGGGAAACGCTGCCTTACGATATTTTTTCACCTC ACCAGGATTTGATTTCGGAACGTCTGGCTACTTTTTACCAGATTGCACAC AACGCCTGCGATGTCCTGATCATTCCGGTTACGACCGCGTTGTACCGGAT GCCGCCGCGAGAATTTCTGGCGGCACATTCATTCTTCGTCAACCAGGGCA GCACGCTGGATCTGCAGTCATTTCGCAGTCAGATGTCACTGGCGGGCTAT TCTCATGTATCGCAGGTGCTTTCACCGGGAGAATACAGTATCCGCGGGGG ACTGATCGACCTGTTCCCGATGGGCAGCCCGCTGCCTTATCGTATCGATC TGTTCGACGATGAAATCGAATCGATACGCACTTTTGATGTCGATACGCAG CGCAGTATCTATCCGGTCAAGGAGATCCGGCTGCTGCCGGCGCGGGAATT TCCACTCGACGATAACGGGCGCAGCCGATTCCGCACCGGATTCCGGGAAA AATTCGAGGGCGATCCCACACGCTGCAGGCTTTACCAGGAAATCAGCAAG GGCAATATTCCCGCCGGAATCGAATATTATCTGCCGCTTTTTTTCGAACA GACGGCCACGCTGTTCGATTACCTGGCGCAGCATTCCACAGTGTGTCTGC ACGGGGAGATCACACCAGCCATCGAAAATTTCTGGCAGGATACCCGTTCA CGCTATCAGTTGATGCGCAATGATCCGGATCGGCCTTTGCTTCCTCCGAT GGATCTGTTTCTGCCGGAAGATCAGTTTTACGGCTACCTCAAATCATACA AACGAATAGAAATGCATACCGGGCAACAGGTAAAGACCGATAAGCCTTTT GCCCGTTCCCTTCCACCTGTACGCGTGGATCGTCGCGCTTCCAACCCGAT CGAGCAGCTGACCGCTTTTGTCCATACATTTACGCAAAAGGGCGGACGGG TTTTACTACTGGCAGAAAGTATGGGGCGACGCGAGCTGATGGCGGAATAC CTGCGCGAATATGGCCTGAAACTGAAACTCTGCGAGGATTTTGCTGCATT TCAGTCAGACACTGCCTCTTGCATGCTCAGTGTGGCTTCCCTGCACAGCG GTTTTATCCTTGCTGCTGAAAACCTGGCGCTGGTTACCGAAAACGAGCTG TATGCCACGCATGTACGCGGACAGCGTACACGTGATGCACGCAAGACTGT TTCGGCCGATTCCATTTTGCGTGATCTGTCCGAAATCAAGCCCGGCAGTC CGGTGGTACATGAACAGCACGGTATCGGGCGTTATCTCGGGCTGGTCAAC ATGAATATGGGTGAGGATGATTCAGGCCAGTCCAGTGAATTTCTCGCTCT GGAATACCAGGGGGGAGATAAGCTGTATGTGCCGGTCACACAGCTTCATC TCATCAGCCGTTACAGTGGTGCCGCACCGGAAGCAGCCCCGCTGCACAAA CTGGGAAGTGGCCAATGGGAAAAGGCCAAGCGCAAAGCGATGCAGCAGGT ACGCGATACTGCCGCTGAACTGTTGAACCTGTATGCGCAACGCGCTGCCC GCAAAGGCCATATATTCCGGTTCAACCAGCATGATTACAATGCTTTTGCC GATGGTTTCGGTTTCGAGGAAACACCAGACCAAGCCACTGCCATCAATGC AGTCATTCAGGATATGGTGTCCGGCAAATCGATGGATCGGCTGATTTGTG GTGATGTCGGCTTCGGCAAAACAGAAGTTGCCCTGCGGGCAGCTTTTGTT GCAGTCACCGATGGCAAGCAGGTAGCCGTACTGGTTCCCACCACACTGCT GGCAGAACAGCATTATCAGAATTTCTCTGATCGTTTCGGGCTGATTGCTG ATCAATGGCCGGTAAAAATTGCCGAGCTTTCACGTTTCCGTTCAGCTCGG GAACAGGCCGAAGCGCTGCAAAGCCTGGCGCAGGGGACAACTGACATCAT CATCGGTACACACAAACTGATTCAGGATAAGGTCAAATTCAAAAACCTGG GACTGGTCATCATCGATGAAGAACATCGTTTCGGAGTGCGTCAGAAAGAA CAGCTCAAAAAACTGCGTGCCGAAGTGGATGTACTGACGCTGACCGCAAC ACCCATCCCGCGCACGCTGGCGATGTCACTCGAAGGCCTCAGAGATTTTT CGGTGATTGCCACTGCACCCCAGCGACGCCTGGCGATCCGGACATTCGTA CACCCTTACTCGGAAGGAATCATCCGCGAAGCCTGTCTGCGTGAACTGAA ACGCGGCGGGCAGATCTATTTTCTTTACAATGAAGTCAGCACCATTCAGA ACATGTATACCAGATTGACCACGCTGCTGCCGGAAGCAAGAATAAACATT GCGCACGGGCAAATGCGGGAAAGTGAACTGGAACATGTCATGCGTGATTT CTACCAGCAGCGTTTCAATCTGCTGCTGTGTACGACCATCATTGAAACAG GGATAGACATTCCCACCGCCAACACTATCATCATCCATCGTGCCGATAAG TTCGGGCTGGCACAGTTGCACCAGTTACGCGGCAGAGTCGGCCGTTCGCA CCACCAGGCGTATGCCTATCTGCTGACACCACCGGAAAAAGCAGCACTGA CCACGCAGGCAACCAGGCGTCTGGAAGCTATTCAGGCGATGGAAGAGCTC GGCTCCGGGTTTTATCTGGCCATGCACGATCTGGAAATTCGCGGTGCGGG CGCGGTATTAGGTGACTCACAAAGTGGCGAAATGCAGGAAGTAGGGTTCA GCCTTTACAGTTCACTGCTGGACGCAGCAATCAAATCACTGAAAGCCGGT CATGAACCGGATATGCAGCAACCCCTGGGAGTTTCCACAGAAATCAGATT GCATGTACCGGCGCTATTGCCAGAAAGTTACTGTGGCGATATCCATGAGC GATTGATTCTGTACAAACGCATGGCGGGTTGCAGTGATGAAACAGAACTG GACGAGATTCACCAGGAGCTGATCGACCGCTTTGGTCTGTTACCTGATCC TGCCCGCGCGTTACTGGACAGTCATCGGCTGCGCATCGAAGCCAGGCAGC TGGGCATTACCCGTATCGATGCCGGACCAGACAACATTCAGTTGCAATTT GTACCAGAACCCCCGATCGAAGCCATAAAAATCATTCAGCTCATTCAGAG CAGCAAGGAATACAGCCTGTCAGGGCCTGACCGCCTGAGCGTCCGGCTGC AAATACCGGATGTTGGCGAACGCGTCAAAAAAATCAAAAAACTGATGACG TTACTGAAAAACTGA >NE0760 nusA, S1 RNA binding domain:KH domain:Type 1 KH domain ATGAGCCGCGAGATTTTACTGTTGGTCAATGCTTTGGCGCATGAGAAGAA TGTGGATAAAAATATCGTTTTTACCGCACTCGAAATGGCGCTGGCTTCTG CTGCCAAGAAGCATACCCGGGATGATATTGACGTGCGTGTCTCGATCGAT CGTGATACCGGTGGATTTCACTGTTTTCGCAGATGGCTGATCGTTGCAGA TGATCCGGTAGAGCACCCGGAGCGGCAAATTACGGTGAGTGAGGCTGTAG GGCGCAATCCACAGGCTGTTCCTGGGGAATATATAGAGGATCTGATGGAG GATGTCACTTTTGACCGGATCGGTGCACAGGCTGCCAAACAGGTCATTTT CCAGAAGATACGTGATGCCGAGCGCGAACAGAATCTGAATGATTTTCTTG ATCGCGGGGAATATCTGGTGTACGGCGTGATCAAGCGTATGGACCGTGGA AATGCAATCATTGAGTTTGGCAAGATCGAAGCAGTTCTGCCACGCGACCA GATGATTTCACATGAAAATCTGCGCATGGGCGACCGTGTCCGTGCCTATC TTCTGAGAATCGATCGGTCGGTGAGAGGGCCACAGCTGGTATTGTCCAGG ACTTCACCGGCGTTTCTGGCCAAACTGTTCGAGCTTGAAGTGCCCGAGAT AGAAGAGGGGATTCTGGAAATCAAAGCAGCAGCGAGAGATCCTGGTTCCA GAGCAAAAATCGCTGTCAAATCGAATGACAGTCGCGTGGATCCGATCGGT ACCTGCGTGGGTATGCGCGGTTCGAGAGTACAGGCAGTTACCAGTGAGCT TGCCGGTGAGCGGGTGGATATCATTCAGTGGTCGGATGATCAGGCCACAT TCGTCGTAAATGCTTTGGCACCCGCTGTGATCAGCAGCATCGTGGTGGAT GAGGAGAAGCATTGTATGGATATCGTGGTGGATGAGGAGAATCTGGCTCA GGCCATCGGCCGGGGCGGGCAGAATGTCCGGCTGGCATCTGAATTGACGG GCTGGCAGCTCAATATCATGACAGAGGAAGAGTCACAGGAAAAAACTGAA GAAGAAGCTGCTTCCATTTGTGAGCTGTTCATGGAGAAACTTGATGTCGA TGAAGACGTCGGGCGTATCCTGGTGGAAGAGGGATTCTCCACTCTGGAAG AGGTCGCCTATATTCCAATTGAAGAAATGTTGGAAATACAGGAGTTTGAT CGTGAGACAATTGAGGAGTTACGTAACCGTGCCCGTAACGCCTTGTTGAC GGATGCCATTGCGACTGAAGAAAAAATTGGCCATGCGTCCGAAGCGCTGC TTGCCCTGGAAGGAATGGATATCGAGCTGGTGCGTGAATTGGCGGAAAAA GGGATCAGTACTCAGGAAGAGCTTGCTGATCTGGCGGCAGATGATCTGGT CGAATTGACGGGCATAGACTTTGAACGTGCAAGTAAAATTATCATCAAGG CACGTGAACCCTGGTTCGCATGA >NE2558 nusB, Antitermination protein NusB ATGATGTCAACCGAAACCGTTCCCCCCGTAAAACGGGTACAAGGCCACAA AGGCTACAAAAACCGTCGTCGTCTGTCACGTGAACTTGCCTTGCAGGGGA TCTACCAATGGCAAGTCACCGGAGGTAACGCTCGGGACATTGGTATGCAA CTGCAGCAAGTCAGCTTTTTCAGCAAGGCAGATGGCCCCTATTTCTCCGA TTTGCTGCAGGGTGTCCTGGAACACGCTGCCGACCTGCAAACGCAGATCC AGCCGCATCTCGATCGGCAAATAGCTGAGCTCAGTCCGGTGGAATGTTCG ATTCTCCTGATTGGTACCTATGAAATGGTTTACCGCCCTGAAATTCCCTG TCGTGCCATCATCAACGAAGCCATCGAACTGGCCAAAAGCTATGGCGGAA CGGATGGACACAAATACGTCAATGGCGTGCTGGATAAACTGGCCACCCGG TTACGTGCCGTCGAACTCCAGCACCCGCCTGCGCGAAATAAAGATTCCGG TTAA >NE2051 nusG, nusG; Bacterial transcription antitermination ATGAGTAAGAAATGGTATGCCGTTCATACCTATTCGGGTTTTGAAAAGAG TGTAAAAAGAGCTTTAAAGGATCGGATAGCGCAGCATAAACTTGAGGATA AGTTTGGTGAGATTTTGATTCCTGTTGAAGAAGTTATTGAGATTAAGGGT GGTCAAAAAAGTATAAGTGAAAGAAAATTTTTCCCAAGTTATATTTTGAT TGAGATGGAGATGACCGATGAAACTTGGCATTTGGTTAAAGGTACGCCAA AAGTAACGGGATTCGTTGGTGGGACATCTACGCAACCTGTTCCAATAAGT CACAAGGAAATAGAAAGTATATTTAATCAAGTGAGGGAAGGGGTAGAAAA ACCCAAGCCAAAAGTAATTTTTGAGGCAGGTGAGGCAGTACGTATCAAAG AAGGGCCATTTACTGATTTTCACGGGAATGTAGAAGAAGTTAATTACGAT AAAAGTAAGTTGCAGGTATCCGTATCCATTTTTGGGCGGCCGACTCCTGT TGAATTGGATTTTCATCAGGTTGATAAGGTTTAG >NE2131 phoB, possible phoB; Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding ATGTCTGCAACAGTTCTGGTAGTGGAAGATGAATCGGCGATTCAGGAGCT GATCGCCTATAACCTGCGCAATGCAGGCTATACCGCTGTATGTACAAACA GTGCCGAGCAGGCGGCAGCCATGGTGAATGAGGTGTTGCCCGATCTGGTA TTGCTGGACTGGATGCTTCCTGGGAAAAGCGGTATTGAGCTGGCGCGATC GCTGCGACGCGATCCGCGTACCAAACCGATTCCCGTCATCATGCTGACTG CTCGAGTGGATGAGAGAGATAAGGTAATCGGATTGGAAACCGGGGCGGAT GATTACGTTACCAAACCGTTCTCCCCGCGTGAGTTGATTGCCCGGATAAA AGCAGTATTACGCCGGAGCCTGCCTGAAGCTTCCGATGAAATTCTCGATA TCGGGGGGGTACAGATCAACCCGATGACACACCGGGTGACCGTTACCGAT CTGAACGATGGCACGCACGAGAAAGAGTTGCTGCTCAGTCCTACCGAATA CCGTCTGTTGTATTTTCTGATGGCGCATGCTGAACGTGTGCATACCCGCG CCCAGCTACTGGATCGGGTGTGGGGAGATCATGTTTTTGTCGAAGATCGT ACGGTTGATGTGCATATACGCCGGTTGCGCAAGGCGCTGGATGTAGCAGG AAAAGCTGATCTCGTGCAGACAGTCAGAGGGGCAGGGTATCGTTTTTCCA CGCGCGGTGAGAGTGAACTCTGA >NE1850 recG, RecG-like helicases TTGGCTGCTCATTTTTTCGACTCACTGGATGAGGCTTTACGCAAGAAGCT CGAGAAACTTGGCCTGTTCAGTGATTTCGATCTGGTTTTGCACCTGCCGC TGCGTTATGAGGATGAAACACGGCTGTCGCCCATTAGCCAGGCCGTTCCT GGAAGTACAGTACAAGTAGAAGGGGTCGTTGCCGAGCAGGAAGTGCTGGT CCGCCCGCGGCGGCAGCTCGTTTGCCGGGTGGATGACGATAGCGGTACGC TTTATCTGCGTTTTTTCAATTTTTATGCCAGTCAGGTAACCGCCTGGTCA CCGGGTACGCGGCTGCGCGTACTGGGTGAAGTACGGGCCGGATTCCACGG AGTGGAAATGGTGCACCCGAAATGCCGGGTAGTGCGTGGCAGTATGGTGT TGGCGAATACGCTGACACCGGTTTACCCGGGAATGGCCGGGCTGCCGCAA CGTACCCTTGCCCGGCTGATCATGCAGGCTTTTGAACGATTACGTGCAAA ACGGCTTCTGCAGGAAACCCTGCCGGCAACGATATTATCTGCTTGTCAGT TCCCTGCATTCGAGGACAGTTTGTCCATACTTCATTGTCCACCTGCCGGG GTGTCGATCACATCCTTGCAGCAACGCTCCCATCCGGCCTGGTTTCGGAT CAAGTTCGACGAATTACTGGCGCAGCAACTCTCCATGCGTTGTCATTATC ACCAGCGCCGCAGTCAGCAGGCACCTGTTCTGCAGCAGCAGACCGGCTTG CAGCAGGCATTGCTGGAGGTACTGCCATTCGGTCTGACTGACGCGCAATG CAAAGTGGTGACCGAAATCAGCAAGGATCTTGCGCAGCCTTACCCCATGC AGCGGTTGTTACAGGGAGATGTAGGCAGCGGCAAAACGATCGTGGCAGCA CTGGCTGCTTTGCAGTCGATCGGAAACGGTTATCAGGTCGCTGTCATGGC GCCGACAGAAATTCTGGCCGAGCAGCATTTCCGCAAACTATCCGACTGGT TGACTCCCCTTGGTGTGGGGGTGGGCTGGTTGTCCGGCAGCCAGAAGAAA AGCCTGCGCAATCAGGAGCTGGAAAGAACAGCAACGGGTGAGGCTATGCT TGTCATCGGAACACATGCGTTGTTCCGGGAGGCGGTCCAGTTCAAGTGCC TTGGGTTGGTGATCATCGATGAACAGCACCGTTTCGGTGTTGGTCAGCGG CTGGCACTGCGTATGAAAGGTGGAGATGAGGAGGTGATACCGCATCAGCT GATGATGAGTGCCACACCGATTCCACGAACACTTTCCATGAGCTATTTCG CTGATCTGGATGTTTCTGTCATCGATCAGCTGCCGCCTGGCAGATCACCG GTGGTAACCAGATTGATCGACAGCAGCCGGCGCGAGGAAATCGTTGCGCG TATCCGTGAAGCTTGTCTGGCTGGTCGCCAGGCTTACTGGGTCTGCCCGC TGATCGAGGAATCAGAGGCATTGCAGTTGAAAACGGCGGTGGAAACCTAT GAAACGTTGAGCCAGACTTTTCCTGATCTCAGAATTGCTCTCATTCACGG CCGGCTCGACAGCGATGAAAAATCTGTGATCATGGCGGAATTCAGTCAGG GAGAAGTACAATTGCTGGTTGCCACGACTGTGATCGAAGTAGGGGTGGAT GTGCCGAATGCTTCGCTGATGGTGATCGAGCATGCTGAGCGTATGGGGTT GTCGCAACTGCATCAGCTGCGCGGGCGGATCGGTCGTGGATCGGCCACCG GTGTGTGTGTCCTGATGTATCAGCAGCCGTTGTCCGAAGTGGCACGTAAA CGGTTGCAGATCATTTTCGAACATCGTGATGGATTCGAAATCGCGCGTCA GGATCTGTTGCTGCGCGGGCCTGGGGAGTTCCTCGGCACCCGTCAGAGTG GTGTGCCTCTGCTGCGATTTGCCAATTTGGAAGAGGATATCGATCTGCTT GAAATGGCACGTAATGCTGCAGAGAACATGCTGCGCGATCATCCGCTGGC GGCGCAGTGCCACATGCAGCGCTGGCTGGGAAGGAAAGAAGATTATCTGC GGGCGTAG >NE0468 rfaH, putative transcriptional activator ATGCACTGGTATCTCGTTCATACCAAACCCAAGCAGGAGAAATGTGCTTT TCAGAATCTGCAACAGCAAGGGTATCGATGTTACCTGCCGATGTTGCCGG TAGAAAAGCTTCATCTGGGAAATCTGACGGTGGTCGATGAACCACTGTTT CCCCGTTACCTTTTTATTCAACTGGAGCAGGGCGATTCCGCCAAAAGCTG GGTGCCGATCCGTTCCACCAGAGGTGTCAACCGGCTGGTATGTTTCGGAT CTGAACCTGCCAGGATCGATGATATTCTGATCGATCTTCTGCGTATGCAG GAAGCTTCTTTCCAGCATAAACCCGAACGACTGTTCAAACCCGGGGAAAG AGTGCGCCTGACAGAAGGCGCCTTCGCCGGTATCGAGGGGATCTACCAGA TGGCAGAAGGTGAACGCCGTGTGATGGTACTCATCGAACTGCTGAGTAAA CCGGTTGCCATGCGAGTTTCACCGACCAGTTTGCGTAAAACAAACTGA >NE2040 rhlE, rhlE; ATP-dependent RNA helicase RhlE ATGAGTAATGATGTGACGTTTGCCCAACTGGGCTTGTCCAGTGAAATTCT CCATGCAGTTAATGATGAAGGGTATGTGAATCCCACTCCGATCCAGGCCC AGGTCATTCCTTCGATTCTGGCTGGTAAGGATGTGATGGCCAGTGCGCAA ACAGGTACCGGTAAGACAGCCGGCTTTACATTGCCGCTGCTGTACCGTCT GCAAGCATACGCCAATACGAGTGTGTCTCCTGCCCGGCATCCTGTTCGTG CCCTGATCATGGCACCGACTCGTGAACTGGCGATGCAGATCGACGAAAGT GTCAGGAAATATGGAAAATATCTTGCCCTGAGAACGGCTGTCGTTTTTGG TGGTATCAATATCGAGCCCCAAATCGCAGCGCTGCAGGCCGGGGTGGAGA TACTGGTGGCTACTCCCGGTCGCCTGTTGGATCTGGTCGAACAAAAAGCA GTCAATTTTTCCAAAACCGAAATTCTGGTACTAGATGAAGCTGATCGTAT GTTGGATATGGGTTTTTTGCCGGACATCAAGCGGGTGATGGCGCTGTTAT CTCCACAACGGCAAAGCCTGATGTTTTCTGCAACATTCTCCGGTGAAATC AGGAAACTTGCCGACAGCCTGCTGAAGCAGCCGGTCCGAATCGAAGCAGC GGTACAAAATACAGTGAATGAATCTATTTCACATGTCATTCACTGGGTAA AGCCAGATAGCAAATTTGCCTTGCTGCTACACCTCATCCGACAGCAGAAT CTGAAACAGGCACTTATTTTCGTCAAAACGAAACATGGTGCTTCCCATCT GGCGCAGATGCTTTCCCGCCACGAAATCTCGGCGGTTGCCATTCACGGCG ACAGAAATCAGCAGCAGCGTACACAGGCGCTCGCTGAATTCAAGCATGGT GACGTGCAAATACTGGTTGCTACCGATGTCGCCGCGCGCGGTATCGACAT TGAAAAGCTGTCACATGTCATCAATTATGAATTACCTGGTAACCCGGAAG ATTATGTCCATCGGATCGGACGTACCGGCCGGGCCGGTAGTAAAGGAAAG GCTATTTCTCTGGTTAGCGAACATGAAAAAGAACTGCTGGCCAATATCGA AAAACTGCTGAACGCCAAACTGGAAACAGAACAGATTGCCGGTTTTGATG CGGAACAGTTTGCTCGCAGCCTGCCAGATCGGAAAAACCGGATGTCGGCC GGTAACTCCCGCTACGGCAATAAGCCGATGGAAAATGGGAGTGAGAAAAG CAGAAGTGAGAAACACAGGAAACTGCCATCATCCCAGAAATACTCCGGTT CTCGCCGAGGGGGAACGCAAAAATACAGCGACCCCATCTTTACCCAGCCT TACGTGCCACAGGCTAATTCGACACAGTCGACAACGCCCAAGCAGCCAGA AATCCAATCTCTGTTCCTGACATACAGGCAGGAAAAAAAGACCATTCCGG CGTTGTTTACGGCCTTGTCGAAAAGTAAAGCTGGCCAGGAGAACTGA >NE1035 rho, rho; Transcription termination factor ATGCGTTTATCCGACTTAAAAAGCATTCATGTTTCCGAATTGGTAAAAAT GGCCGTCGCCAACGATATCGAGGGTGCCAACCGAATGCGCAAGCAGGATC TGGTTTTTGCACTCCTGAAGAATCAGGCACGTAAAAGCGAAAGTATATTC GGAGAGGGCACACTGGAAATTCTGCAAGATGGTTTCGGGTTTTTACGTTC CCCCGATACCTCCTATCTTGCCGGTCCGGATGATATCTATATTTCTCCCA GCCAGATCCGGCGATTCAACCTGCATACTGGTGATTCAGTAGACGGTGAA ATACGCCCTCCCAAGGAAGGAGAGCGTTATTTTGCCCTGGTCAAGATAGA TAAGGTCAATAATGAACCACCTGAAAATTCCAAGCGCAAGATACTGTTTG AAAATCTGACACCTCTTTTTCCGACCGAACGCCTGACACTAGAACGAGAC ATCAAATCTGAAGAAAACATTACCGGCCGAATCATTGATTTGATTGCGCC TATCGGCAAAGGTCAGCGCGGGTTGCTGGTCGCCAGCCCAAAATCCGGAA AAACGGTGATGCTTCAGCATATTGCACATTCCATTGCGGCCAACCACCCG GATGTCGTATTAATGGTGCTGCTGATCGATGAACGCCCGGAAGAAGTAAC AGAAATGGTACGTTCCGTGAAAGGGGAAGTCATATCGTCCACTTTCGATG AATCGGCTGCTCGCCACGTTCAGGTAGCAGATATGGTCATTGAAAAGGCA AAACGACTGGTGGAACACAAAAAAGACGTCGTCATTCTGCTCGATTCGAT TACTCGCCTTGCTCGTGCCTATAACACGATCGTACCCGCATCGGGCAAGG TGCTGACCGGCGGTGTGGATGCCAATGCCCTGCAACGCCCCAAGCGCTTC TTTGGTGCTGCCCGTAATATTGAGGAAGGAGGATCACTTACCATCATCGC CACCGCTCTGGTAGATACCGGTTCGCGCATGGATGATGTGATCTACGAAG AATTCAAGGGAACCGGCAACATGGAAATTCATCTCGATCGTCGCATGGCA GAAAAACGTATTTATCCTGCCATCAATGTGAACCGATCGGGAACCCGTCG TGAAGAACTGCTGATCCCCTCCGAAATTCTGCAAAAAATATGGATTCTTC GTAAATTGCTTTATCCAATGGATGAAATGGATGCAATGTCATTTCTGCTG GATAAAATCAAGGCTACAAAAAATAATGCTGACTTTTTCGATTCCATGCG GCGTGTGTAA >NE2324 rnc, rnc; ribonuclease III (RNAse III) protein ATGACCAGTTCCCGGCCTATTGCACACAATACGAAAAACAAGCAGACAAA AACGCTGAAAGGGCGAGATTACGCAGTTTTTTTGCAGAAACTGGGTTATA CCTTCAAACAGCCCGATTTACTCCGGGAAGCACTTACTCATCGCAGTCTC GGTTTTCCGAACAATGAACGTTTTGAATTTCTCGGTGACAGTGTGCTGAA CTGTGCAGTATCAACATTGCTGTTCAAACGTTTTCCATCATTGCCGGAAG GAGACCTGACCCGATTACGTGCCAATTTCGTCAATCAGCAGGCATTGCAT CGACTGGCATCCGCCCTGGGTATCGGAGAGCTGATTTTACTCGGCGAGGG TGAGCGTAAAAGTGGTGGGCATCATCGACCTTCGATTCTGGCAAATGCAG TGGAAGCCATCATTGGCGCGATTTATCTCGAAAGCGGGTTTGCAGTGGTG GAGCAGGTCATTGTTGCATTGTATGAACCCCTGATCAGGCAGTTGGATCC GGATACTTCCGGCAAGGATTCCAAAACCCTGCTGCAGGAATATCTGCAGA GTCGTAAAATCGCTCTGCCTGAGTACAGCGTGCTGTTGGCACAGGGTGAT CCACACGCACAGGTTTTTCATGTGGAATGTGTCATTCCCGGATTCGGCAT TCGCACGAGAGGTGAGGGAACCAGCCGCCGCCGGGCCGAACAGGAAGCTG CACGCCAAGCCTACGAACTTGCCATCGTAAGGCATTGA >NE2130 rnk, Prokaryotic transcription elongation factor GreA/GreB ATGAGTATCAAACCCAAAATCATGATTTCTTCGCTCGATGCAGAGCGCCT GGAAATATTGCTGGAAACTCTCTCGCAAAATGCGTTTCCGGGCAGGGATG ATCTGGAAGCCGAGCTTGCCCGGGCAGAAGTGGTAGATCCGGAGGAGATT CCACCCACCGTTGTGACGATGAATTCGACTGTCAGATTCAGAGTCGAATC CTCTGCCGAAGAATTCTGCCTGACGCTGGTTTACCCGAAGGATGTCGATA CCAGCGGGGAAAAGATTTCGATCCTTGCGCCGGTAGGAAGTGCACTGCTG GGACTTGCACAGGGAGATGAAATCGAGTGGCCCAAACCGGGTGGTGGCGT ATTGCGTGTGCGCATCGTGGAAGTGACTTATCAGCCGGAGCGTTCCGGTG AATATTACCGGTAA >NE0350 rnr, rnr; exoribonuclease RNAse R (vacB protein) TTGTCAATCAAGAGAAAAAGAAACAAGAAAAATCAGCTTCGTGAACTCGA TCCCTTTCTTAAACGTGAGCAGACCCGTTACGGGCAAGCGCTGCCCAGTC GTGAATTCATCCTGGAAGTACTGGATAAACAGGGGGTGCCGATCAGTGAA TCCAAACTATTGAAACTGCTGGATATTACATCCGAAGAATCCGAATTCTT TCGTCGCCGGCTGGCTGCGATGATTCGTGAAGGGCAGATCATCTGTAATC GCAAGGGCGATATTTGTGTAACCGAAAAACTGGAACTCGTAAAAGGGGTT GTTCAAGGCCATAGCGATGGTTTTGGTTTTCTGATTCCGGATGATGGCAG CACTGATCTGTTCCTGACTCCCAAAGAGATGCACAAAGTGCTGCATGGTG ATCGCGTCATTGCCAGGGTTACCAATATCGTGGATCGGCGGGGGCGGCGG GAATGCAGAATCATCAGAGTTCTGGAGAGCGTCAATACGCAGCTGGTCGG AAGATTATTCGAAGAACACGGTATTTTCTTCGTCGTGGCTGAAGATAAGC GGATCAACCAGGATATTCTCATCCCCAAGGAAAATATCATGGATGCGCAT GCCGGGCAGATCGTTGTGGCACGCATCATTCAGCAGCCAAGGGAGCATGC CCAGCCGATTGGACATATTATCGAGATCCTGGGGGATTATGCTGCGCCAG GCATGGAGATCGAAATCGCGTTGCGCAAGTTTGATTTACCCCACGAATTT CCACCGGAAGTTATCTCTGTCAAATTTCCCCAGAAAGTTCTGAAGAAAGA TCTCACTAAACGGGAGGATATTCGTCATCTGCCGCTGGTGACGATCGACA GTGAAACAGCGCGGGATTTTGACGATGCTGTTCATTGTTGTCAGGAAGGA AAGGATTATCGGCTATTTGTTGCCATTGCCGATGTCAGCCATTATGTCCG TGATCAGGATGCTCTGGATAAAGAAGCATTCAATCGGGGTAATTCAGTTT ATTTCCCGCGGCGGGTCATTCCGATGCTGCCGGAAGTGCTTTCCAATGGA TTGTGTTCACTCAATCCGCAGGTAGATCGCCTGTGTATGGTATGTGAAAT GCTTTGGACGGCCAGAGGAGAACTGGTCGAATATCGTTTTTATCCGGCAG TGATGCTTTCTCACGCGCGCCTGACGTATAACATCGTTGCCGAACTGCTG GATCAGCCAAAAGGGGCGGTTGCCAAAGAACACAGACAACTGCTGCCACA TATTCAATTGTTGTACCGTTTGTTCAAGGTGTTGCACAAATCCCGCGTAA AGCGGGGCGCAATTGATTTCGAAACCATTGAAACAGAAATGGTTTTCAAT GATCAGGGCAAGATCGAGCAGATATACCCGGTAAAGCGTAATGATGCTCA TCGTCTGATCGAGGAATGTATGCTGGCGGCCAATGTGTGCGCGGCTGATT TTTTGCAGAAGCACGAGCAACCCGTTTTATACCGGATTCATGAAGGGCCG ACTGATGAAAAGCTGGTAGCACTGCGGGATTTTCTGAAAGAGTTTGGCCT GCAGTTACGTGGCGGTGAAAAACCCCAGGCCAGAGACTATGCCCGGATAC TCGATCGCATCAAGGAGCGGGCAGATGCGCAATTGCTGCAAACGGTGATG TTGAGATCGCTCAGTCAGGCTATGTACAATCCGGATAATATCGGGCATTT TGGTCTGGCCTATGAAATGTATACTCATTTTACTTCACCCATCCGGCGTT ATCCGGATCTGCTGGTGCATCGTGCCATCAAGGCAGTACTTGCGGATAAA CAGTATGAACCGGGTGATTGGCATGAAATCGGCAAACATTGTTCGCAAAC GGAGCGGCGTGCCGATGAAGCTACGCGAGAAGTTCAATCCTGGCTCAAGT GTTTTTACATGCAGGATAAAATTGGCGATTGCTTTGGGGGTGTGGTCACA GGAGTAACTGCCTTTGGACTGTTCGTCACTCTGGATGAGATTTATGTCGA GGGTCTGGTTTATATTTCAGAACTGCCCAGTGATTATTTTCATTATGATG CAGTCAAGCATGTACTGCGCGGCGAGCGGAGTGGAATCAGTTTCCGGTTG GGTGACAGGCTGCAGGTAAAATTGGTCCGGGTCGATCTGGCGACGCGCAA GATCGATTTCATCCTTGCAGATAACAGCGTACGCAAGAAATCCAGCAGGT AA >NE0426 rpoA, Bacterial RNA polymerase, alpha chain ATGTCATCGAATAGTTTTCTGACACCTAGGATTGTAGAGGTACATAATAT TTCACCTTTGCATGCGAAGGTCGTAATGGAGCCTTTTGAGCATGGTTTTG GCTATACTTTGGGTAATGCGTTGCGAAGAGTATTGCTATCTTCCATTCCT GGTTGTGCACCAACCAAAGTCAGCATTAGCGGAGTAGTTCATGAATATTC AACAATAGATGGTTTACAAGAGGATGTTGTTGATCTGATACTGAACTTGA AAGGGGTGGTTCTTAAACTTCACAATAATAAGACTCAGTCAGTTCTTACC CTGAAGAAAAGTTCGGAAGGTATTGTCACAGCGGGTGATATTGAAGCTAC TCATGATGTAGAAATAGTAAACCCTGATCATGTGATTGCTCATATTACCA GTGGCGGTAAAATTGAGGCTCAAATTACTGTTGAAAAGGGGAGGGGTTAT TGGCCTTCTGCTAATCGCAGTAAAGAGGATAAAAGTTCTTCTTCGATTGG GGATATTCTGTTAGATGCTTCTTTCAGTCCGATCAGACGTGTAAGTTACG CTGTGGAAAGTGCTCGTGTTGAACAAAGAACTGATCTAGATAAGCTGATT ATCGACATAGAGACAAATGGTTCGGTAGATCCTGAAGAAGCGATACGGTA TGCGGCCAAGGTCTTGGTTGAGCAGTTTTCTTTCTTCGCAGACCTTGAAA GTACACCGCTGCCGACAGAACAGCCAAAAGCACCTGTCATCGACCCTATA CTATTACGTCCAGTTGATGATTTGGAACTTACAGTACGTTCTGCAAACTG TTTGAAAGTCGAGAATATTTTTTATATTGGTGATTTGATTCAACGAACTG AGGCAGAGCTACTTCGTACTCCTAATTTGGGAAGGAAGTCACTTAATGAA ATTAAAGAAGTTCTTGCTTCTCGTGATTTATCCTTGGGTATGAAATTAGA AAATTGGCCACCAGCTAATTTGGAAAACTATATAAAGGAACCCGGTCATG CGTCATCGTAA >NE2046 rpoB, RNA polymerases beta subunit ATGAGTTATTCGTTTGCCGAGAAAAAACGTATTCGGAAGAGCTTTGCCAA GCGTGCCAGTATTCTACCATTTCCGTTTCTCCTCGCTACTCAAATACAGT CTTATACTGATTTTCTGCAGGCAGAAATTGCGCCTGGTAAACGCAAGAAT CAGGGGCTACAGGCTGCATTTAACTCAGTTTTTCCAATAGAGAGTCATTC TAATAATGCTCGTCTGGATTTTATAAGTTATATGCTTGGTTCTCCTGTAT TTGATGTCAAAGAATGCCAGCAAAGGGGCTTGACTTACGCAGCTCCGTTA CGTGCCAGGGTTAGATTGACCATTCTGGACAAGGAAGCGTCAAAGCCGAC AGTCAAAGAAGTCAAAGAGCAGGAAGTGTATATGGGAGAAATTCCTCTCA TGACTGATACTGGTTCTTTTGTTGTCAATGGTACAGAACGCGTTATTGTT TCACAGTTGCATCGCTCGCCTGGTGTATTTTTTGAGCATGATCGAGGCAA GACTCATTCATCCGGAAAATTATTGTTTTCTGCCCGTATTATTCCGTATC GTGGTTCATGGCTGGATTTTGAGTTTGATCCCAAGGATTATGTTTATTTC AGGATTGATCGTCGCCGCAAAATGCCGGTTACGACTCTCCTAAAAGCGAT GGGGTATTCTCCCGCACAAATTCTCGCGGATTTTTTTGAGTTCGATCATT TTATCCTCGTGGACAATAAGATTTTCTTCAATCTTATACCTGAGCGCTTG CGTGGAGAGTTGGCTGGTTTTGATATAGTTTCTGAAGATGGCAAGGTTTT TGTACAGAAAGACAAACGAATAACGGCCAAGCATGTTCGTGATTTGCAGC AGGCTAACCTCACTAAAATTCCTGTACCTGAAGAATTTCTGCTGGGAAAG ATTCTGGCTGCGGATCTCGTAGATAAGGAAACAGGGGAAATTATTGCGCT GGCCAACAGTGAAATAAGTGAAACGTTACTTGGACGAATCAGGCAAACTC AGAGCAGTGAAATCAGCACGCTGTTTGTAAATGATCTTAACTACGGTCCT TATATTTCACAAACATTGAGGATTGATGAGACCACTGACCAGATGTCTGC CCAGGTTGCTATTTACAGAATGATGCGGCCAGGTGAGCCACCCACTGAAG AAGCCGTTCTGGCTTTGTTCAATGGTTTGTTTTATTCCCCAGAGCGTTAT GATTTGTCCGTCGTCGGGCGGATGAAATTCAATCGTCGGGTGGGGCGCGA GGAATTAACGGGATCTACGACTCTATCAAATGACGATATCATCGATGTTA TCAAGATACTGGTCGAGCTGCGCAATGGTCGAGGAGAGATCGATGATATT GATCACTTAGGTAATCGTCGTGTTCGTTCTGTGGGTGAGTTGGCGGAAAA CCAGTTTAGAGCAGGGCTGGCACGAGTCGAGAAGGCGGTCAAAGAACGTT TGAGTCAGGCAGAATCCGAAAATCTTATGCCACATGACTTTATTAATGCC AAGCCGGTCTCTTCCGCGATTCGTGAGTTTTTTGGATCGAGTCAGCTATC ACAATTCATGGATCAGACTAACCCTTTGTCTGAGGTTACGCATAAAAGAC GGATTTCAGCATTGGGGCCTGGTGGTTTGACACGGGAACGTGCAGGTTTT GAGGTGCGAGATGTGCATCCAACCCACTATGGTCGTGTTTGTCCGATTGA AACACCTGAAGGTCCCAATATCGGTCTGATCAACTCACTGGCTCTTTATG CCAGAACCAATGAATATGGATTCATAGAAACTCCGTATCGAATGGTTAGA AATGGACGGGTTACTGAAGAAGTCGTATACCTTTCAGCAATTGAAGAAAG TCAATATGTGATCGCACAGGCGAATGCGAATTTTGACCAGAATGGGGTAT TTACCGATGAAGTCGTTTCCTGCCGCCACAAAAATGAGTTTACTCTGGCA TCAAGAGATCAAATTGAATATGTAGATATTGCACCTGCACAAATTGTTTC TGTAGCAGCATCTCTGATCCCCTTCCTGGAGCATGATGATGCTAACCGTG CACTGATGGGATCAAATATGCAACGTCAGGCCGTACCCTGTTTGCGTGCC GAGAAACCGTTAGTGGGCACGGGGATAGAGCGAGTAGTTGCCGTGCATTC TGGAACTGCCGTCAGAACGATACGTGGTGGTGTGGTGGATTATGTGGATG CCAGTCGTATAGTGATCCGTGTGCACGATGCGGAGGCTCGTGCTGGTGAA GTGGGTGTGGATATCTACAATCTTACAAAATATACTCGTTCAAACCAGAA TACCAATATCAATCAAAGACCTATTGTAAGAATGGGTGATGTGCTCTCTC GTGACGATGTAATTGCAGATGGCGCATCGACGGACTTGGGTGAACTGGCT CTTGGTCAGAATATGCTAATAGCATTTATGCCTTGGAACGGACTTAATTT CGAGGATTCTATTCTGATATCTGAACGGGTTGTATCTGATGACCGATTTA CTTCAATCCATATTGAGGAATTGGCAGCAGTCAGTCGTGATACCAAACTG GGTACCGAGGAAATAACTGCGGATATACCAAACCTGTCTGAACGCCAGCG TGCACGGCTTGATGAGTCTGGGATAGTTTACATTGGTGCTGAAGTTGAAG CCGGGGATGTATTGGTGGGTAAAGTAACACCAAAGAGTGAAACACAGCTG ACACCGGAAGAAAAGCTTCTGCGAGCCATTTTTGGAGAAAAGGCTTCTGA TGTCAAAGATACATCTTTGCATGTGCCGGCTGGTATTTCGGGGACAGTGA TCGATGTACAGATTTTTACCCGTGAGGGAGTGGATCGCGACAAACGTTCC AAACAAATAATCGCAGATGAACTGGGCCGCTTTAAAAAGGATCTTGCTGA TCAGATGCGTATCGTTGAAGCAGATGCGTTTCAACGTGCAGAGCGCTTGC TTACTGGCAAAGTTGCTGCTGGCGGACCTAAAAAACTAGCCAAAAATTCG ACCATCACTCGTGATTATCTCGAAAATGTGGAAAAGCACCACTGGTTTGA TATACGTCTGGTCGATGAAAACACAAGTCTTCAACTGGAACAGATCAAAG ATAGTCTGGTTCAGAAGCGAAAACTGTTTGATCTTGCATTTGAAGAGAAA CACCGAAAACTTTCTCAAGGCGATGAATTACCGCCTGGTGTACAGAAAAT GGTGAAAGTCTATATCGCTGTAAAAAGAAGATTGCAGTCTGGCGATAAGA TGGCTGGTCGACATGGAAACAAAGGTGTTATTTCCAAGATTGTACCGATA GAAGATATGCCTTATATGGCGGATGGCACACCAGTTGATGTTGTGCTGAA TCCATTGGGTGTTCCTTCACGTATGAATATTGGTCAGGTACTCGAAGTGC ATTTGGGATGGGCTGCCAAGGAGCTGGGTAAACGGGTGAATGAAATGCTG GCCTCTCAGCGTAATGTTTCTGATATCCGCGATTTTCTAAATAAAATTTA TAACAATAGTGGTAAACAGGAAGATCTGACTTCTCTGGAGGATGATGAAG TACTGGCATTGGCAAGAAATCTGTCGAGTGGAGTGCCTTTTGCTACTCCG GTGTTTGATGGTGCACATGAGTCAGAGATCAAACAGATGCTGAAACTGGC TGGATTGCCTGAGTCTGGTCAAACTACACTCTATGATGGTAGAACGGGGG AAGCTTTTGATCGTCCGGTTACTGTAGGTTATATGCATGTGCTAAAACTT CATCATCTGGTAGATGACAAGATGCATGCGCGCTCAACAGGTCCATATAG CCTTGTTACTCAACAACCATTAGGTGGTAAGGCCCAATTTGGGGGGCAGC GGTTTGGTGAAATGGAGGTTTGGGCACTGGAAGCTTATGGCGCATCCTAT ACCCTTCAGGAAATGCTTACTGTGAAATCTGATGACGTTAATGGACGGAC CAAGGTTTATGAGAGTATCGTCAAAGGTGATCATAAAATTGATGCGGGTA TGCCGGAATCATTCAATGTACTGGTTAAGGAAATCAGATCTCTGGGGCTT GATATTGACTTGGAAGAGCATTGA >NE2045 rpoC, RNA polymerase, alpha subunit GTGAAAGCACTGCTTGATTTATTCAAACAAGTTACACAAAAAGAAGAATT TGATTCCATAAAAATAGGTTTGGCTTCTCCTGAAAAAATTCGTTCATGGT CATACGGGGAAGTGAAAAAGCCTGAAACAATCAATTACCGGACCTTCAAA CCCGAGAGAGATGGTTTATTTTGTGCCAAAATTTTTGGTCCGGTCAAAGA TTATGAATGTTTATGCGGTAAGTATAAACGGCTCAAGCACCGGGGCGTGA TATGTGAGAAATGTGGTGTGGAGGTTACTTTATCCAGAATCAGACGTGAG CGGATGGGGCATATTGAATTGGCTTCACCCGTTGCTCATATATGGTTTTT GAAATCATTGCCTTCGCGTCTAGGTCTCGTTCTGGATATGACGTTACGAG ATATCGAACGAGTTCTGTATTTTGAAGCTTATGTCGTTACCGATCCCGGC ATGACTCCGCTGAATCGTGGTCAACTTCTGACAGAAGACGACTACCTGAA TAAAACAGAAGAATTTGGGGATGATTTCAGTGCTGTGATGGGCGCAGAAG GTATCCGTACCCTGCTAAGCAACATGGATATTCCATTGGAAATTGAATCC TTACGTTTGGAAATCCAGACGACTGGTTCAGAAACCAAAATCAAGAAAGC CGCCAAGCGGCTCAAGGTGCTCGAAGCATTCAATAAATCCGGTATGAAGC CGGAATGGATGATACTGACGGTATTGCCTGTGCTTCCGCCTGAGCTGAGA CCATTGGTTCCATTGGATGGAGGTCGTTTTGCAACCTCTGATCTCAATGA TTTGTACAGGCGTGTTATCAACCGCAATAATCGTTTGAAGCGGTTGCTGG AACTGCGGGCACCGGAAATTATCATTCGTAACGAAAAACGTATGTTGCAG GAATCGGTGGATTCGTTGCTTGATAACGGCCGCCGAGGAAAAGCAATGAC CGGGGCCAATAAGCGGCCCTTGAAATCACTTGCAGATATGATCAAGGGTA AGGGTGGTCGTTTTCGCCAGAACCTGCTGGGTAAGCGAGTAGACTATTCC GGCCGATCCGTAATCGTGGTGGGTCCGCAACTCAAGCTTCATCAGTGCGG TTTACCGAAAAAAATGGCACTGGAGTTATTCAAACCATTTATTTTCAATA AATTGGAAACGATGGGGGTTGCAAGTACGATCAAAGCTGCCAAGAGGGAA GTTGAGAACGAAAGTCCAATCGTATGGGATATCCTGGAGGAAGTTATCCG TGAACATCCTGTAATGCTTAATCGTGCCCCTACCTTACATCGACTCGGTA TTCAAGCGTTTGAGCCTATCCTGGTCGAAGGAAAGGCGATCCAGTTACAT CCGCTCGTATGTGCTGCTTTCAATGCCGACTTTGACGGTGATCAGATGGC TGTACACGTTCCTTTGTCGCTCGAAGCTCAGATGGAATGCCGTACGCTGA TGTTATCGACCAATAACGTCCTTTCACCAGCTAATGGTGATCCAATCATT GTTCCTTCTCAGGATATTGTGCTGGGTCTTTATTACATGACCCGCAAGAA GATAGGTGCTCAGGGAGAGGGAATGGTTTTCTCGGATATTTCGGAAGTTG TGCGTGCTTACGAAAATAAGGTTGTGGAGCTGAATGCCGGAATTATCGTC AGAATCAAGGAAAGAAAAAAATCTCGTTCACATGGCGAAGAGCCTGTTGA AGCAATAACACGTTATGAAACCACCGTTGGTCGAGCACTTATTTCTGAAA TTTTGCCAGCAGGACTTCCTTTTTCCATAATCAACAAGGTACTCAAGAAA AAGGAAATTTCGAAGCTTATCAATGCGAGTTTCCGTTTATGTGGTTTACG GGAAACCGTTATATTTGCTGATAAGCTTATGTACTCTGGTTTTTCCTATG CTACTCGTGGTGGTATTTCCATCTGTTTGGATGATCTTGTTACCCCATCG CAAAAAAATGACATTATCCATGCTGCTGAGCAGGAAGTGCATGAAATTGC AAATCAGTATATATCCGGTCTGGTGACACAAGGAGAGCGTTACAACAAGG TTGTAGATATATGGGGTCGAGCCGGTGATCAGGTAGCTAAGGCGATGATG GATCAGCTGAGTGTCGAGCCGGTTACAGATCGTGAAACCGGACAGGTCAG AGCCGATAAGAATGGTCAGGTTGTTACTCAGGAATCATTCAACTCAATTT ACATGATGGCGGATTCGGGTGCTCGAGGATCTGCTGCACAAATTCGTCAG CTTTCCGGTATGCGTGGTCTTATGGCGAAGCCCGATGGTTCTATCATTGA AACACCGATTACAGCCAATTTCCGTGAAGGCCTCAACATTCTTCAATATT TTATTTCGACACATGGTGCAAGGAAGGGATTGGCCGATACAGCGCTCAAG ACTGCAAATTCAGGGTACCTCACTCGTCGTCTGGTTGATGTGACTCAGGA TCTAGTTATCACAGAAGATGATTGTGATACAGATGGTGGCGTAATAATGA AGGCGCTGGTGGAAGGTGGTGATGTCATTGAGTCTTTACGAGAGCGTATA TTGGGTCGTGTGGCTGCGACAGATATTGTGAATCCGGAAACTGGTGCAGT CATTTATGCGGCGGGTATGTTGCTGGATGAAGATGCGGTTGACGAGATCG AAACTTGTGGTATCGATGAAGTAAAAGTAAGGACACCACTCACTTGTGAA ACCCGATATGGGTTGTGTGCAAAATGCTATGGGCGCGATCTGGGTCGAGG AATGCTCGTCAATGTTGGAGAGGCAGTAGGAGTAATCGCTGCTCAATCGA TTGGTGAGCCGGGTACACAGTTGACCATGCGGACCTTCCATATTGGTGGT GCGGCTTCAAGAACAGTTGTGGCTAATCAGGTTGAAAGTAAATCCAACGG GGTTATTCGTTACTCTCATCATATTCGTTATGTGAAAAATGCCCAGAATG AGCTGATAGTCATTTCACGCAGTGGTGAAGTTTATATTCAGGATGAAAAT GGTCGTGAACGTGAGCGGCATAAAATTCCTTATGGTGCAACATTACTTGT TCAGGATGGTGAAGTAATCAAGGCAGGACAGATTCTGGCATCATGGGAAC CACACAAACGTCCGATCATAGCGGAATATGCGGGTAAGGTACGTTTTGAG AATGTTGAAGAAGGTGTAACAGTCGTCAGGCAAATCGATGAAATAACCGG CCTGGCAACTCTGGTGGTTATCGACCCCAAACGGCGCAATGTTGCGCAAT CTAAGGGATTACGGCCACTTGTCAAATTCCTGGATGAGAATGACAATGAA ATCAATATCCCTGGAAGTGACCAGCCTGTCAGTATTACATTCCACGTCGG ATCGATTATTACGGTACGGGACGGACAGCAGGTGAACATCGGTGAGGTTC TGGCGCGTATTCCTCAAGAGACATCCAAAACTCGTGACATTACGGGTGGT TTACCCCGTGTGGCTGAACTGTTTGAAGCCAGAGTGCCGAAAGATGTGGG TTTTCTGGCAGAAGCCACCGGTACAGTTGCTTTCGGGAAGGATACCAAAG GAAAGCAACGACTGGTCATTACTGATCTCGACGGGGTTGCGCATGAATAT CTTATTCCCAAGGATAAGCATGTGACAGCACATGATGGACAAGTCGTAAA TAAAGGAGAAGTGATCGTTGATGGGCCGATCGATCCCCACGATATATTGC GGTTGCAAGGTGTCGAGGCATTAGCCCGGTATATCAGTAACGAAGTACAG GATGTTTACCGCTTACAGGGGGTGCGTATCAATGATAAGCATATCGAGGT GATTGTTCGTCAGATGCTGCGCCGAGTTCAGATAATGAATGCGGGTGACT CAAGTTTCATTCCGGGCGAGCAAGTCGAGCGGGCAGAAGTACTTACTGAG AACGAGAAGCTCATCGCCGAAAACAAGATGCCTGCCACCTATGAATATGT ACTACTAGGTATAACCAAGGCATCGCTTTCTACAGATTCATTTATTTCTG CGGCTTCCTTCCAGGAAACAACCCGGGTTCTGACCGAAGCATCCATCATG GGTAAGAAGGATGATTTACGTGGTTTGAAAGAAAATGTGATTGTGGGTAG ATTAATACCGGCAGGAACCGGGCTGTCTTTTCACAATATCCGGAAAAAAC AGAGATTATCGGAGAGCGCTGCTTACCTGGATACTGATTTAACGGAGAAT GAAGTGACGGAATGA >NE0229 rpoD, DNA-dependent RNA polymerase sigma subunits (sigma70/32) ATGGCAAAAGCAAAAGTGTCGGGATCAGCTAAGAAAAATATCGTTACATC TACAGAGGTGACTGAAACAAAAAGCGGTAAATCGCGTGTTGAAACTCCAG ACAATGGGGTTAAAGTTACCGGTAAAAACGCCAAAAATACCTTTTCAGCT GAAACGGAGGTTGTCTCCGTCAAGAAAGAAGCAACTTCTGCTTCCAGGAA AAAGTCTGTCAAAGCGGCTAAATCTGATGATGATTCTGTTCTAGTTGGGC AGAATAAGAATACATTGCTCCCTGCGGAAAAATCTGAGGATCTGGGGGCA GTTGATGAAGTTTCTGAGAAAACCAGAGTAAGTAAAAGAAATAAAAGTAC TCTGTCAGAAAAACAGATCACTGATTTGAGCGAGAGTGCGGTGTCGGTGT CATCGGATAACGATATCGAATTACGCAGGATGCGTTTAAAGAAACTGATC ATGCAGGGTAAGGAACGTGGTTACCTGACTTACTCTGAGATTAATGACCA CTTGCCGGATGACATGCTGGATGCCGATCAGATCGAAAGCATCATCAGCA TGATCAACGATATGGGTATTTCCGTGCATGATGAGGCGCCTGATGCGGAA GCTCTCCTGATGTCGGATGCGGCAACAGCAGTGACTGATGAAGATGTCGT GGAAGAAGCAGAGGCAGCACTTTCCAGCGTAGATTCAGAGTTTGGCCGTA CTACGGATCCGGTGCGGATGTATATGCGTGAAATGGGATCGGTAGAGTTA CTGACGCGTGAAAGCGAAATAGAAATCGCCAAGCGCATCGAGGATGGTTT GAGGCACATGATACAGGCAATTTCAGCCTGTCCGACAATCATAGAAAATA TACTCGAGCTGGCAGCGGATGTGGAAAATGGCCGGTTACGCGCAGACGAA CTGGTTGATGGTTTCCTGGACGATGATACAGATGAAATCATGGGTAAGGA AATGTCTGAGGAATCGCTGGATCAGGATTTTGATTCAGAGGATGGGGAAG ACGAGCAAGTGGCTGCCGCCAGTGCCGATATGCTGAAGATGAAAGCAGAG GTGCTGGAGCGCTTTGCGGTGATTCGTCAGACCTATGACGGTATGAAAAA AATCATCAACAAGAAAGATGGGCGTCAGGATAAAAAGTACAAACAGTTGC AGGAGAAAATTTCTACCGAACTGATGGCGATGCGTTTTTCTGCCAAGATG GTCGAAAAACTGTGTGATACACAACGTGATATCGTAAACGATATCCGCAA CTGTGAACGCAAAATTGCTGAGCTGTGTGTTACACGGGCAGGAATGCCGC GAAACTATTTTATCAAGGCATTTCCGGGGAACGAGACAGATATTGACTGG ATCAGTTCGGAAGTCGAGTCAGGTCAGCCGTACAGTCAGTCGCTCGAACA TTTCCGTCCGGCAGTCATGGAGCAACAGCAAAAAATGCTCGAACTTCAGA AACAAGCCGGTATTCCTATCAAGGAACTCAAGGAGATCAACCGCCGTATG ACGACTGGTGAAGCCAAGGCACGTCGTGCGAAACGTGAAATGACTGAAGC CAATTTACGATTGGTTATTTCAATTGCCAAGAAGTATACTAACCGCGGAT TGCAGTTTCTTGATCTGATTCAGGAAGGTAATATCGGGTTGATGAAAGCC GTTGATAAATTTGAATATCGGCGCGGATATAAATTCTCGACCTACGCAAC ATGGTGGATTCGTCAGGCAATTACACGTTCCATTGCTGACCAGGCACGTA CCATCCGTATCCCGGTACACATGATCGAGACGATTAACAAGATGAATCGT ATTTCCCGTCAGATTCTGCAGGAAACCGGACAAGAGCCTGAACCGGCAGT ACTGGCCGAGAAGATGGAAATGCCTGAAGAGAAAATCAGAAAAATTCTCA AGATATCGAAAGAGCCGATTTCGATGGAAACCCCCATTGGTGATGATGAA GATTCTCACTTGGGAGATTTCATTGAAGATGCTTCGACCATGGAGCCGGC AGATGCTGCAGTTTATGCTGGTTTACGCACCGTCACGAAGGATGTGCTTG ATTCTTTGACCCCACGAGAAGCCAAGGTTTTGCGTATGCGTTTCGGTATT GAAATGAATACTGATCATACTTTGGAAGAAGTCGGAAGACAATTTGACGT AACGCGCGAGCGTATTCGCCAGATCGAGGCAAAAGCGCTGCGTAAACTGA GACATCCTGCTCGGTCCGACCGCTTGCGTAGTTTCTTGGATAGTGGAAAC TCCTGA >NE2331 rpoE1, Sigma factor, ECF subfamily ATGAGTGATCGTGAAATCGATCAGCAGTTGGTAGAACAGGTACAACGAGG TGACAAGCGTGCGTTTGACCTGCTGGTTATCAAGTATCAGAGACGACTGG CGCGTTTATTATCGCGATTCATCCGTGATCCTGCTGAAGTGGAGGATATT ACTCAAGAGACTTTTATCAAGGCCTACCGGGCATTACCTTCTTTTCGCGG TGATAGTGCCTTTTATACCTGGTTATATCGGATCGGGGTCAATACGGCCA AGAATTTTCTGGTATCACAAGGTCGTAAGCTTCCTGCAACTGTAAATGGG TTCGGTACCGAGGAGGCGGAAAATTTTGAAGGAGCCGATCAGCTTCGGGA AGTAAACACTCCGGAAAGTGAACTTATGGGCAAACAGGTTGCCCAAACCG TAAATCAGGCGCTTGAAGCTCTGCCCGAGGAGTTGCGCACGGCGATTATT CTCAGGGAAATCGAAGGGCTTAGTTATGAAGAGATTGCTGATATCATGAA TTGTCCTATTGGTACGGTGCGGTCCCGGATATTCAGGGCACGTGAAGCTG TGGCCGACAAATTAAGGCCTTTATTGGGTACTGATAAAAGTAAAAGATGG TGA >NE0584 rpoH, Sigma-70 factor family ATGAATGAGATTATGGCTTTACCGGTGATGGCAGGCGGTGATCTGGACAG CTATATTCGTGCGACCAGCAGCTTTCCTGTCTTATCCCGGGAAGAGGAAG CTTCCCTGGCTAAACGTATGCGAGAAGAGGGTGACGTCAATGCAGCGCAT CAGCTGGTGCTTTCCCATTTACGCGTGGTGGTTACCATTGCACGCGGTTA TCTGGGATATGGGCTGCCGCATGCTGACTTGATACAGGAGGGTAATATCG GCCTGATGAAGGCTGTCAGACGGTTTGACCCTGAACGGGGTGTCCGGCTG ATTTCCTTTGCGATTCACTGGATCAGGGCGGAAATTCATGAATTCATCAT GCGTAACTGGCGGCTGGTCAAGATCGCCACGACCAAACAGCAGAGAAAGC TTTTTTTCAATCTGCGCAGCATGAAAAAAGGGCTGGATACGATGAGCCAG GCTGAAGTGGCTTCGATGGCGGAACAGTTGGGTGTCAAAGCTGAGGAAGT CGTCGAGATGGAAACACGTTTCAGCGGCCGGGATATTTCACTGGAACCGG TGACGGACAGTGATGAAGATGATTTCAGCCCGATTGCCTGGCTGACGGAT GGATCCGATCCCTCCAGGGAGCTGGAAAAAGAGCAGTTGGAGCGACTGAC ACACGCCCGGCTGAAAAATTCGCTGGACAGTCTGGATGAACGCAGCCGCC GTATCATCGAGGCACGCTGGCTGCGGGAAGACAAGGCTGCCACCTTGCAT GAGCTGGCTGATGAGCTGGGCGTTTCTGCTGAGCGTGTGCGTCAGATCGA AGCAAAAGCCATGAAGAAAATGCGAGCCGAGATCGCCATCTGA >NE0062 rpoN1, Sigma-54 factor family ATGAAACCAACCCTGCAACTCAAGCTCAACACCGGCCTTACGCTGACACC GCAGTTACAGCAATCTATCCGGTTACTGCAACTGTCTACGCTCGAGCTCA ATCAGGAAATCACGCGTCTCGTACAGGAAAACCCCCTGCTCGAACTGGAT GAAGGGATTGATCAGGATGGATTTGAGACTGGAGGACCGGATATTTCCCT GTCACCTTCAGATTCGTCTGCTGCAACAGAAAGCAATGGAATCTCAGAAA TCGGAAAAAATACAGATATCCAGAGTGATTGGCCGGATGACCCGTTATAT GCCGATCAGGAATTTTTCTTCGATACACGTAGGCGGAGTGATGAAGACCA TGACCAGGATTTCTCGCGCTTGATCAGCAAACCCGTCAGTCTGCGGGAAC ACTTGCTCTCACAAATCAGTCTAGGGCAATACTGTGAGCGCAGTAAGAAA ATCGCCGAACTGCTGGTGGACAGCCTCAATGACGATGGGTATTTGTCTCA AGATCTGGATGAGCTTGCGGAATTGCTACCACCCGAATTGGAAATCAGTA CCGCAGATCTGGAGTCAGCTCTGGATTATATTCAGCAACTGGATCCACCG GGTGTGGGGGCGCGCAATCTGCAGGAATGTCTGTCCTTACAACTTAAAGC ATTACCGGGCAACACGCCATTGCGAGATGAAGCGCTCAAACTGGTAAACG GGCATCTGGAGAGTTTTGCTGCTAAAAATTTCCAATTACTCAAAAAGGTG CTTGATTGTAATGAAACTTGTCTGCAATCGATCTACCAGCTGATTACTCA ACTCAATCCCAAGCCTGGTGATGATTTCAATACGACAACAGCACGTCATG TCATCCCGGACGTGATCGTGACCCGGTCAGACAGCGGCTGGGGGGTACGG CTCAACTCCGATTCGGTTCCGCGCGTGCGCATCAACAGCTTGTATGCCGG TATTTTGAAACACCATCGCACGGAAGCAACTCAGATGCTGATGGGTCAGT TGAAAGAGGCCCGCTGGCTGGTCAGAAATCTCGATCAACGGATGGATACC ATACTCCGGGTCAGTCAGGCGATTGTCGATTGTCAGCAAGCTTTCCTCGA ACAGGGCGAAACTGCTATACGTCCTTTAGTTATGCGCGAAATTGCTGTGA CACTTGGGCTGCACGAATCGACCATTTCGCGCGTTACGACTCAGAAATAC ATGCGGACACCGCACGGTATTTTTGAGCTCAAATATTTTTTTGGCAGCCA TATCCCGGCTGAAAGGGGAGAAGCACATTCAGCCATTGCCATCCGTGGGC TGATCAAGCGGCTGATTCAAGATGAAGATCGCAGAAAACCGCTCAATGAC AGTCAGATTTCACAGATGCTGGCGCAGCAGGGTATTGTTATTGCTCGCCG TACGGTTGCAAAATATCGGGAGTTCATGCATATTCCCCCGACTAATTTAC GCAAAACACTCTAG >NE2255 rpoZ, RNA polymerase omega subunit ATGGCACGTATTACGGTAGAAGATTGTCTGGAAGTAATCCCGAATCGTTT CGACATGACCCTGGCAGCCACTGTGCGGGCAAGGCAGGTCTCAGTCGGTT CCACACCGATGATCGATTCCGAGCGCGATAAACCGATCGTCATCGCTTTA CGTGAACTGGCACAAAAAAAATACGGCGAAGAAATACTCAATACGCTCCG CTGA >NE2537 sinR, Helix-turn-helix motif GTGCCATCGCCCCTGGGGGACAAGATCCGCGCATTGCGGAAGCAAAAGAA GCTCAGTCTGGAACAGTTGGCCGAACTGACCGACTCCAGCAAGAGCTACA TCTGGGAACTGGAAAACAAAGACGACCCGAAACCATCGGCCGAGAAGATC GGCAAGATCGCTACCGTCCTCGAGGTCACCACGGAGTTCCTGCTGACCGA GTCGGCAACCACCCCGGACGAGGAAGTGCTCGACGAGGCCTTCTTCCGTA AGTACAAAAACATGTCCGAGCCCGACAAGAAGAAGATCCGCAAGATCCTC GATGCCTGGGAAGATGAATGA >NE1998 sohA,prlF, HtaR suppressor protein ATGCCAACCACCCTTGAAATCGAATCCACGTTGACCGACCGTTACCAGAC CACAGTGCCTGAATCCGTACGTCGCGCCCTTCAACTTGGTAAGCGCGACA AGATTCACTACACCATCCGCCCCGGCGGCGAAGTAGTACTGACCCGTGCT GAACCCCCTGAAGGTGATGATCCGGTGATCGGACAGTTCCTGACCTTCCT GGCCCTGGACATTGCAAGCCACCCTGAGCGCCTGCAGGCTGTAGATGCCA GCCTCGTCCAGCATCTGCAATCTCTGGTCGGTGGCATTCAAGTCGATCTC AATGCTGCTCTGTCGGTGGATGATGCATGA >NE2473 spoOJ, ParB-like nuclease domain:ParB-like partition protein ATGGTAAAACCAAAAGGATTGGGAAGAGGGTTGGATGCATTATTAGCAGG CAATCCTCCGGAAACGGATTCCCTGCAGAATCTCGATGTGGGTTTGTTGC AATCCGGTAAATATCAGCCTCGAACCAGGATGGATGAAGCCTCCTTGCAT GATCTGGCTGAATCGATCAAGGCGCAGGGAATCATGCAGCCGATACTGGT GCGTCCCCTTATGATGGGCGGCTATGAAATCATTGCCGGGGAACGCCGCT GGCGTGCCGCACAAATTGCAGGATTGGAACAGATTCCGGCAATCGTGCGC GAGGTGCCGGATGAATCCGCGCTGGCTCTGTCTCTGATCGAGAATATCCA GCGCGAAGATCTCAACCCGCTGGAAGCTGCACTGGGAATACAACGGTTGA TCGAGGAATTCGGCATGACTCATCAGACTGCCGGGCAGGCGCTGGGATAT TCCCGCAGTGCAATTTCAAATCTGCTGCGCCTGCTCAATCTGGCTGCGCC CGTGCAGGACCTGATCATGCAGGGAGAAATCGATATGGGACACGGGCGAG CCCTGCTTGTGCTGGATGCCGGCAAGCAGCTGGAAGTCGCGCACCTGATC ATACAAAAGCAGTTATCCGTACGTGAAACCGAAAACCTGCTCAAGCGAAT GAATGAGATGCCTTCCGTAAAAAAACGGTCATTCCCGGATCGGGATCTGT TACGTCTTCAGGAAGATATCTCTGCCCGGCTGGGTGCCAATGTCATTATC AAACCCGGGAAAAAAGGGACTGGCAATGTCGTTATTCATTATGCCAGCCT GGAGCAGCTTGACGGCATACTGGCAAAATTCTAG >NE0368 spoT, spoT; bifunctional enzyme (p)ppgpp synthetase II and guanosine-3',5'-bisdiphosphate 3'-pyro ATGCAAAATCCTATTTTGAATGACTCGGACGATTCTGCGGTTATTTCACC GGAAGCGGAACTGCTTATCAGTGAAGTATCCCAATATCTCAAACCTGAAG ATCTGGCATTACTCAAGAGTGCCTATTTCTTCAGCCAAAAGGCACACTCC GGACAGTTCAGGAAATCAGGTGAACCTTACATCTCCCACCCGATTACTGT AGCCAGAATACTGGGCGAGCTGCGCCTGGATGCAGTCACACTCACTGCAG CACTGTTACACGATGTGGTAGAGGATACCGGCATCCTGAAGCAGGAAATC AGCGAAAGATTTGGTTCTTCCGTGGCTGAACTTGTCGATGGGGTTTCCAA ACTCGACAAAATCAGATTCCAGACACAGGCGGATATGCAAGCGGAAAATT TCCGCAAAATGCTGCTGGCTATGGCACAGGATGTGCGGGTAATACTGATC AAGCTGGCTGATCGCCTGCATAACATGCGCACTCTCGAGGTAATGTCACC GGAGAAACAACACCGTATCGCCCAGGAAACTCTGGAAATTTATGCTCCGA TTGCTCATCGACTCGGCCTGGAAAACATCTACCAGGAGCTGCAGGAGCTG GGTTTCTGTTTTTCCTATCCGACCCGCTACAAGGTCCTGCTCAAAGCAAC CAAAGCAGCCAGGGGAAATCGACGGGAAGTCGTCGGAAAAATTCTCGATG CAATCAAGCAGCGTCTGCAGGAAGCAGAGTTGGATGCTGTAGTAACCGGA CGTGAAAAACATTTGTACAGTATCTATAAGAAAATGGCCGAGAAACACCT CAGTTTCTCGGATGTACTGGATATTTACGGTTTTCGGGTGATCGTCAGAG ATGTATCTTCCTGCTATGTGGCACTTGGAGCGCTCCACAGCCTTTACAAA CCGATCCCTGGTAAATTCAAGGACTACATTGCCATCCCCAAACCGAACGG CTATCAGTCGTTACACAGTACATTGCTTGGACCTTACGGATTACCGATAG AAATACAGATCCGCACCCATGAGATGCATCACATTGCAGAAGCCGGGGTA GCTTCACACTGGCTTTACAAAAGCAAGAACACTGATGCTGGAATAGATGA TCTGCACATGAAAGCCAATCAGTGGATGAAAGGTTTGCTGGAAACCCTGA ATGACTCTTCCGATTCGCTCGAATTTCTGGAGCACCTCAAGGTTGATCTG TTCCCTGGTGAAGTATATGTGTTCACTCCTCAAGGCAAGATATTGACATT ACCAAGAGGCGCAACAGTAGTGGATTTCGCCTATGCTGTGCATACTGACG TCGGAAACTGCTGTGTAGCGGCCAGAATCAACGGTGAAATCACCCCGTTG CGTACCCGACTGAAAAGCGGGGATCGCGTGGAAATCATCACTGCCCCTGC AGCCAAGCCGAACCCCATCTGGCTGTCTTATGTCGCCACCGGTAGAGCGC GCTCCAGTATTCGCTATTTTCTGAGGACCATTCAATACAATGAATCAGTC AAGCTTGGAGAACGCCTGCTGAATCAGGCGCTGCATTCTTTTGGCGTAAA TCCGGACGCTATCGAGCCATCGCAATGGGAAAAGTTGGTCAAGGAAAGCA AGGCCAAGTCCAAAGAAGCACTGCTGGCAGACATTGCCCTGGGAAAACAG CTTGCAGCCGTTCTGGCCAAACGCCTGGCAGTACCGGGTGAATCTGTCTC AAACATACAGAGCAATAACTCCATCACCATCCTGGGTACTGAGGGAATGG CCGTCAAATTTGCACGATGCTGTCATCCCATACCGGGCGACGGTATCGTT GGTCTGATCAAGAAAGATCAGGGACTGGTGATCCATATGCAAGACTGTCC TGCGGTAATCAGGATCAAGGACCATAAAAACATGGAAAATCAGCTGGATG TCGTCTGGGGAACGGATATCGATCGAACTTTTCCTGTCAGTATATTCATG ACGGTGGTAAACAAAAGCGGCGTATTGGCCAGAGTAACTGCCGAGATCGC TAAAGCAGATTCGAATATTGACGATATCACGCTGGAGAATGACAAAGATT ACACCACGATGCGCTTTATCCTGCAGACCAGAGATCGTCAGCACCTTGCA CAGATTTTCCGCAGGCTGAAGCACATTGATGAAATAGTCAAAATGGGGCG TATCAAGAACCTGTAA >NE0344 tctD, possible Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding ATGCGTATTCTGGTTGTCGAAGATGATTCTCTGGTGGCAAGCGGCATCAA ACAGGGACTGACCAACGCGGGCTATACCGTGGATGTGGCACGAAACGCCG CAAGTGCTGAACGCCATCTCCGCGAAGAGAATTTTGATCTGGCCGTGGTA GACATCGGTCTGCCGGATATCGATGGATTGACCCTCGTGCAACGACTGCG TCACCGGAAAATGTGCCTGCCCGTGCTGGTGCTGACGGCACGCGGCAGCA TGGAAGACACCATTGCCGGCCTCGATATCGGTGCGGACGACTATATGACC AAACCATTCCGCCTGCCGGAGCTGATCGCCCGTATCCGCGCCCTGATCCG CCGCGCCCATTCGATCACCAGTACCGAATTGCAGCATGACCGACTGGTTC TCAATACCGGCAGCTATACAGCGACATTGAACGATCAGCCGCTTTTGCTG ACCCGGCGCGAATGGACAATCCTCGAAACCCTGCTGATGGCCTCTCCCCG CGTAGTCAGCAAGGACAAACTACTGCAGAACCTGACAGGCTGGGACAAGA ACATTACCCCCAATGCCATCGAAGTCCACGTATCACGTCTGCGCGCCAAG ATCGCCCCGGGCGGGATCGAAATTCGCACGGTTCGCGGCATCGGCTATCG TATCGACCAGAGTCACTCATGA >NE2197 tex, S1 RNA binding domain ATGACTTCTACAGCCCCATCTGCTGTTTCAGAGCCAACGCAGAAAAAAAT CATCAACACCATCGCCGAAGAACTTGATGTCGCACCGCGGCAGATCAGCG CAGCGGTAATGCTGCTGGATGAGGGGGCAACCGTACCCTTTATTGCGCGA TATCGCAAAGAGGCGACCGGTAACCTGGACGACACACAACTGCGCTTGCT GGAAGAGCGGCTGGCTTATCTGCGTGAGCTGGAAGCACGACGACAAGTTA TCCTGGCTTCGATCGAGGAGCAGGGCAAGCTCACCGATGAACTGCGTCAT GCCATCGATCAGGCTGCTACCAGGCAGCTTCTGGAAGATATTTATTTGCC TTACAGGCCGAAGCGCCGCACCCGGGCACAAATCGCACGTGAAGCCGGAC TGGAGCCGCTAGCGGATACGCTTCTGGCAGATCCGACACTCGATCCTGAG CAGGAAGCCGCAAAATATATCAAGGTGGTGCCGGCTGCTGAGGGGGTGGA AGCGATCAATGTTCCCGATACGAAAACAGCACTTGAAGGTGCGCGCGATA TTCTGGCTGAACGCTTTGCGGAGACAGCGGATTTGCTCGTTGTACTGCGT AGCAAGCTCTGGCAGGAGGGGGTGGTGACTTCGACAGTCGTTGCCGGTCA GGAAAAGGCAGAGGAAGAAAAATTCCGTGACTATTACGCTTATACCGAAC CGGTACGGTTGATTCCATCGCACCGTGCACTGGCATTGTTTCGCGGTCGT GCGCTGGGCGTGCTCAGAATCGATCTGGATCTGGACGAAACAGCCCGGGA GAGCATTCCACATCCCTGCATCGCCATGATTGCAACACATTTCGGGATCG AAAACCGTGATCGGAAAGCGGATAAATGGCTTGGGGATGTTTGCCAGTGG GCCTGGCGTGTCAAAGTACATCTGCATCTCACTACCGAACTGTTGTTGCA GGTGCGTGAAGCGGCAGAAACAGAGGCGATCAGGATTTTCAGCCGGAACT TGCGTGAATTGCTGCTGGCGGCTCCGGCAGGCCCCAAGGCCGTGCTCGGG CTCGATCCGGGTTACCGTACCGGCTGCAAAGTGGCTGTGGTCGATGCTAC CGGGAAATTGCTGGAAACCGTGACGATTTATCCGCATCAGCCACGGAATG ACTGGCAGGGTTCGCTGGCAACCCTCGTGCAACTGGTACACCGGCATGGC GTTGAACTGATTTCGATTGGCAACGGGACAGCAAGCCGGGAAACCGACAA ACTGGCTACCGAAGTTGTCAGGCTGGTTGCGGAACAGTCCCCCGAATCGA AGCTGACCAAAATTGTTGTCAGCGAGGCAGGCGCCTCGGTTTATTCAGCG TCCGCACTGGCTGCAGCAGAATTTTCCGATCTGGATGTGAGCCTGCGCGG TGCTGTTTCCATTGCCAGACGCTTGCAGGATCCCCTGGCAGAACTGGTCA AGATCGAACCCAAATCGATTGGCGTCGGCCAGTATCAGCACGATGTGAAT CAGCGTATTCTGGCGCGATCACTCGATGCTACGGTGGAAGATTGCGTCAA TGCGGTCGGTGTGGATGTCAATACCGCATCTGCTCCGCTGCTGGCTCAGG TTTCCGGTCTCAATCGTGTACTTGCGCAGAACATCGTCAGCTATCGTGAT GCCCATGGCCCGTTTTCAAACCGGCAAACGCTACTCAAGGTGCCGCGTGT GGGGGAAAAAACATTCGAACAGGCTGCAGGTTTCCTGCGCATCAACGATG GTGATAATCCACTGGATCGTTCCGCTGTTCACCCGGAAGCCTATCCGGTG GTCGAACGTATCCTGGCGCGCCTGAAGAAGGGAATCGGGCAGGTGATGGG CCAGCCGGGCACACTCAAAGGGCTTTCTGCCGAAGAATTTACCGATGAAA CCTTTGGTTTGCCAACCGTGCGCGATATCCTGACCGAGCTGGAAAAACCC GGCCGTGATCCGCGTCCGGAATTCAAAACAGCCGTTTTTCAGGAAGGGAT TGAATCAATCACCGATTTACAACCCGGGATGATTCTCGAAGGTGTCGTGA CCAATGTAGCCGCTTTCGGTGCATTTATCGATATTGGCGTGCATCAGGAT GGTCTGGTGCATGTTTCTGCGCTAGCGAACAAATTCATCAAAGACCCCCA TCAGATCGTCAAACCGGGGCAAGTCGTCAAGGTCAGGGTACTGACGGTGG ATGCGGTACGCCAACGTATCAGCCTGACTATGCGAATCGACGATATTCCT GAAACAATCAGCCAGCCGGAAACACGAAAAGCCAGGCCGGATGACCGACA ATCCCGGCGAGGTTCCCGTTCACTACAGACTGCGTCCAGAACAGGGAAAT CTGAACCTGCCGGTGCGCTGGCCCTTGCACTGGCACGAGCGAAAGAGAAA AGATAA >NE0928 yhdE, Uncharacterized protein family UPF0074 ATGAGACTGACGAATTACAGCGATTACGCGTTACGCATCCTCACTTATCT CGGTTTGAAAAGAGAGGAATTGTCCACCATTACGGAAATTGCGGATTGTT ACGGTATTTCGCGCAACCATGTCGTCAAGATCGTGCATCACCTTGGCCAA CTGGGTTATGTGGATACACTGAGAGGAAAGAATGGGGGCATCCGCCTGGC TCACGCCCCTGAGAAAATCAATATCGGTGAAGTAATACGTCATACAGAAA CTTCGATGGATATCGTCGAATGTTTCAGTAATCAGAATTCATGCATCATC GGTTGCAGTTGTGTGCTGCGCACAGCCATTTCGGAAGCACTCTCCGCGTT CATGGCCGTGCTGGACGACTATACGCTGGCTGATCTGATAGCGCCCAGAC GTCAGCTGAGCAGAAAGCTGCACGTCATGCAGATATCTGACAGCCTGTCT GATTAA
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