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# Neisseria meningitidis MC58, MC58

>NMB1303 transcriptional regulator, MerR family
MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDNDLQWLG
LLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAEL
KRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA
>NMB1711 transcriptional regulator, GntR family
MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGVSRPSVR
SALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFD
FSCHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVS
FHQTIADAAHNLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQH
RVLYEAISNRRPGEASEAAKAHLNYVASSILKDREYQSRNRHADTLAQND
LKRVQDWAV
>NMB0643 MafB-related protein
MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEPDGKYHL
FGSRGELAERSGHIGLGKIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHE
VHSPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGY
PAPKGARDIYSYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGSMLTQGV
GDGFKRATRYSPELDRSGNAAEAFNGTADIVKNIIGAAGEIVGAGDAVQG
ISEGSNIAVMHGLGLLSTENKMARINDLADMAQLKDYAAAAIRDWAVQNP
NAAQGIEAVSNIFMAAIPIKGIGAVRGKYGLGGITAHPIKRSQMGAIALP
KGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITSSTVPPSNG
KNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNINSNFSQHAQLEREIN
KLKSADEINFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEING
KAYIVRGNNRVFAAEYLGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNV
KRPRYRSK
>NMB0105 PhnO-related protein
MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLSYSKWVR
PILVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQ
GGQNNPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAF
AALSVLRSALTDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFRE
ACTLASGRHIHIDDIVTLPQSRRKGYASRLLEEVRKIGAETGVTKIHLNV
HVNHDRADAHRLYFKNGFEICAYHFRCDPK
>NMB1585 transcriptional regulator, MarR family
MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIG
EKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPL
TESAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK
>NMB1816 conserved hypothetical protein
MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETAELKMPA
VIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQ
RDIPSAALADMVLKELLRQDTEAAVRFAALHKRFDNPADFASWLAQAVKT
GGKA
>NMB1336 conserved hypothetical protein
MNLSNHFLIAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSPITMDMI
FSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIAL
TSSRDVIENISREGAVDKALISIGYSSWSKGQLERELADNAWLTVPADEH
ILFDIPYEHRYAAAFAKLGIDPLALFSGAGHA
>NMB1856 transcriptional regulator, LysR family
MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLL
NRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSA
MPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELD
DSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLN
TWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAE
GKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELGNNLCG
>NMB0121 conserved hypothetical protein
METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNIPRLEQL
AQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKME
LKHCKEMLEQKDKEIELLRKLTETV
>NMB0595 DNA-binding response regulator
MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSGQYDVVV
LDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVP
KPCTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKD
MPLELTSTEFNLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHIS
SIRHKLGDASLIQTVRGLGYLFVKN
>NMB1007 transcriptional regulator
MNNSSFFGNRLKEERKKLKMTQAEIAEKCGVSGRMWGDYERGISQPKAEL
FFQFEKVGIDVQYVMHGRRGETAVMPSETLNAEEQELLVLFREAAAADRE
MILMVARRAEKKAQTALGKVSNG
>NMB1563 transcriptional regulator, GntR family
MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLLPGKKLT
ESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVF
NARIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLS
NAFHVELARLVGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHS
EHREILDLLLAGRRNRVVKILRRHLGNCMERLEKTLED
>NMB1878 transcriptional regulator, AraC family
MCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFALQRLAQNAAALTAA
ACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRRRIDEA
ADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLE
HALALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC
>NMB0556 putative repressor protein
METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKSETLKKI
KQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDI
RAAAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGV
LNDGDSILVNHGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEA
YPAFEINLNDLTDDVEIIGRVEWFGRTI
>NMB0282 ribonuclease II-related protein
MNIFYEESGQFKIAAIIQKNDATYQVDTPHGKRTKVKANNVFAEFDGDMA
AFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATL
IALYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEAL
KRGEMPSEIAADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGG
ITSIPQYLQDGFEIKYFPKGTGFPDLALPEMPDLPKADVTAFSIDDESTT
EVDDALSLTDLDNGTKRVGIHIAAPSLAVKPGDKMEKNIMERLSTVYFPG
GKITMLPENWIAAFSLDAGAHRPAVSIYFDVDGEFNVGAPTCKIEAVNIA
TNLRIQAIEPHFNAETGLDEAGEMMFAHHQDLIWFYQFATALQKARGKYE
PDRAPQYDYSIELDEEGKVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQK
QLISLIDDTAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVY
LQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKSQALFKITEL
DAEKQFVSLNYIKAVAPAGTTAGNAV
>NMB1204 transcriptional regulator
MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRTY
VSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQM
PSESGI
>NMB1389 RpiR/YebK/YfhH family protein
MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASVSQPTVI
RFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGN
AAASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFF
RFGMSTVAYVDTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKEN
GASVIALTRNDSPLAQLADCVLSVATQENAELYTPMVSRLLQLAVIDILA
IGLALRLGDAASLQLQKSKKSIHNKHIDYDKD
>NMB0739 conserved hypothetical protein
MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLLAQLSKG
KPKLKILNKQDLADPERTKIWLEHYNSRPDTCAIALDSSETGAHGKITQA
CRAMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITK
AEQRLFLADDFWLYDTPGMLWPKIIVEEGGYNLAAGGAVGRNALDEEEVA
LELLDYLRRHYLPMLQERYQADKDPSSHWDENVWLEWIAKKRGAVLSGGR
INYQKAAENILTDFREGKIGRITLETPNQWETWLKKARQKEAELKAIREA
RKAERKGQKLRKHKECRLKNIFQAASLYSNRFQTAYPNPCRFSTDTRMTD
KISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVLAQLKTRWQD
RALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQQ
PVTRGDIEGIRGVAVSQNVMQTCRIGGGLKSSDIGTHWENPHCGRQRQRS
SAIWV
>NMB1944 ParB family protein
MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQARVQIDDE
ALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPA
VIKTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQA
VGKSRSAISNSLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELA
QKAVKNGWSVREVERRSQAALQNKRPEPKKTAAADIGRLNDLLTEKLGVN
AEVKTANHKKGRIVLYFDTPETFGHLLEQLGIDYRP
>NMB1420 putative factor-for-inversion stimulation protein Fis
MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLLVCVMEQ
CGGNQSKASVMLGLNRNTLRKKLIQHGLL
>NMB0933 cytidine and deoxycytidylate deaminase family protein
MLTTPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLTLTKSTL
WQLESLLDGTPPQEMSQAHKARLLAELKNHPPVAAFPPQEEMEHFMCEAL
RQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQA
GREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGS
IVNLFADKRLNTHTAIRGGILQEECRAVLSRFFQNKRKG
>NMB2055 transcriptional regulator, LysR family
MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLENHYGTP
LFERKSTPLRFTPVGERLLRLAHELIPQVAVAEWDLARITEGEAGELRIA
VECHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIV
SEAEKQNGISFQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPV
PDEMLDLPKKILIPKNINPPRRHSELTIAIIQLVASRRGIAALPYWTVMP
YLEKGYVVHRQITADGLQSKLYAAIRTEDTDKSYLNNFCQIIRERGFADL
PGLSELEPV
>NMB1018 conserved hypothetical protein
MSLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEGLLNTES
YLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGT
ALLHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIK
IKCELMRKHL
>NMB1891 helix-turn-helix family protein
MKYKNEALAAIHEMMEGAYNIGAIDKKTMRDFDKSCLTEIKPLSGGDIKA
IREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIE
AIA
>NMB2075 BirA protein/Bvg accessory factor
MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQMPAHIRG
LLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILEL
ARIAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQY
ELGSLSPVAAVACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTG
GKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADAAVLLETLLVE
LDAVLLQYARDGFAPFVAEYQAANRDHGKAVLLLRDGETVFEGTVKGVDG
QGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKRRDSERFLLLDGGNSRL
KWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCAVCGEFKKA
QVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGK
RYPFPTTTGNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGA
AKVAEALPPAFLAENTVRVADNLVIYGLLNMIAAEGREYEHI
>NMB0577 NosR-related protein
MIHIISILKSIGISGIVMSCFSIKRMSAFRARITAFFAAFVFLTAALPAY
AERLPDFLAKIQPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTD
AVNTRGYSSKPIDTLMVLANDGTIAGAKLVDHHEPIMLIGIPHLPAPGRA
IRSNWLPAYIKPNFTLTNRLRLKGLPTVPQPSKATGAGVP
>NMB1378 conserved hypothetical protein
MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQLFGKLR
RAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHH
GAPCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH
>NMB1250 transcriptional regulator, LuxR family
MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMISRLQPD
VVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECMRIGAR
GYLLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQAL
SSLTPRELEILGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSR
VQAAVYAIRHNVPQPVPE
>NMB1422 putative ATP-dependent RNA helicase
MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTG
TGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQ
GYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNIH
LNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRK
LAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLLERLIVDLHMN
QVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNL
RVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAI
SLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREP
RQRNRYESAKAQREKNTRPENAANDAGAACGKIAGRSRRSRREHRTCALL
QPRYGVK
>NMB1049 putative transcriptional regulator
MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVGTPLFRR
TGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHP
IDSAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNA
AQRGIRSVFLQNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSR
KHLHQFWRSNRLSPKKQILCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKE
GAGVAIIESCRHSMPLNFIYAEEYEDNPHVSLLLECIEKVWGVQAVQPPV
VSDN
>NMB1200 ribonuclease II family protein
MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVPSKIESL
ARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEA
HKDGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREG
TVLDIVERAQSKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPE
SGQVIVGEIEVYPEQNRPAVAKIIEVLGDYADSGMEIEIAVRKHHLPHQF
SEACAKAAKKIPVHVRKSDLKGRVDLRDLPLVTIDGETARDFDDAVFAEK
VGRNYRLVVAIADVSHYVRPDDVIDADAQERSTSVYFPRRVIPMLPENLS
NGICSLNPDVERLCMVCDMVVTYAGNIKEYRFYPAVMRSHARLTYNQVWK
WISDGIDHPYKAQIDTLYKLFKILQKKRFERGAVEFESVETQMIFDDNGK
IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEK
LATLREQLGLLGLQLGGGDNPSPKDYAALVEQFKGRPDAELLQVMMLRSM
QQAVYEPHCDGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTP
KKSWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFEGKISGMT
SFGIFVTLDGIHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDR
VAVRVARADLDDGKIDFVLIAGGSGRGRKVKSSASAKPAGTAGKGKPKTA
AEKKTARGGKVRGRGASAAAESRKKAKKPVPIKVKKRKGKS
>NMB1003 hypothetical protein
MRMAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRDIDDL
VASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD
>NMB1843 transcriptional regulator, MarR family
MPTQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRLLAENGT
LDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEG
EKLYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS
>NMB0573 transcriptional regulator, AsnC family
MLIWSPSVRIAANIRTDNPNSLKRNANMPQLTLDKTDIKILQVLQENGRL
TNVELSERVALSPSPCLRRLKQLEDAGIVRQYAALLSPESVNLGLQAFIR
VSIRKAKDAREDFAASVRKWPEVLSCFALTGETDYLLQAFFTDMNAFSHF
VLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
>NMB0290 putative transcriptional regulator
MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTVQAKLLH
RNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPL
WFAGSQICNWLAEYRERYPEVALELILDNRHVDLIAEGVDLALRVSQTLS
PSLIARPLAEIEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKL
DLTRKSDGKKYRLELTPVIRTDNTLMMREMIKAGACIGYQPLWAAEHDLR
CGTLVRLLPGYAVPTDRLNAVYADRAFLSAKVRSFIDFLNEKIASRKGCR
NAV
>NMB0075 putative transcriptional accessory protein Tex
MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGGLDDTQL
RRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDL
YLPYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDA
KAALDGARAILMEQFAEDAELIGTLRDKLWNEAEIHAQVVEGKETEGEKF
SDYFDHREPVRTMPSHRALAVLRGRNEGVLNIALKYQPDDTPITRQSEYE
QIIACRFKVSDGHKWLRDTVRLTWRAKIFLSLELEALGRLKEAADTDAIT
VFARNLKDLLLVAPAGRLTTLGLDPGYRNGVKCAVVDDTGKLLDTVIVYL
HQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVRGMPEMGLH
KIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
PKSIGVGQYQHDVNQNQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISG
LNQTLAQNIVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKE
PLDASAVHPEAYPVVAKMLAQQGISAAELIGNRERVKQIKASDFTDERFG
LPTILDILSELEKPGRDPRGEFQTASFAEGIHEISDLQVGMILEGVVSNV
ANFGAFVDIGVHQDGLVHISALSNKFVQDPREVVKAGDVVKVKVLEVDAA
RKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRNDRAPANSAMAD
AFAKLKR
>NMB1009 conserved hypothetical protein
MNNYYLYRNCSSDVLWVKRIQRQIDGSLLLISDNSTYPPMPLALAEHPDI
QIIGQVVQVSKDLN
>NMB0910 transcriptional regulator
MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGIAAKALP
EVAKAFGVSETWLRTGEGSRTAPVLIDPDLPHEVKDIHRPMTWSSNDPLP
DDDYVFVPYLKESCFKGGVGTYEIPDYNGYRLPFGKSTLKRKGINPDNVF
CCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQ
PGNSVLIRSHNSGFYGDENAPLDSLTVIGRVFWWSVLD
>NMB0173 transcriptional regulator, LysR family
MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELAVSLFDR
SSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFT
VAPYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPF
QEPGIVTEPLYDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCM
RDQVLSSCSELAAKQRIQGLTNTLQGSSINTIRHMVASGLAISVLPATAL
TENDHMLFSIIPFEGTPPSRRVVLAYRRNFVRPKALSAMKAAIMQSQLHG
VSFICD
>NMB0810 transcriptional regulator, TetR family
MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISPGNLYYH
FRNKDEIIVQLFKRYSEALLAYLNEAVLPSDVEDSINYMAGIYDVMWEYR
FLFSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQT
AMNDLAVNMWMVTKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLL
PEHRKKYDRKIGNGNP
>NMB0437 conserved hypothetical protein
MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKVVTALVK
GGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLIT
PSCRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ
>NMB0009 BolA/YrbA family protein
MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARLARHRLI
KDGLKAQLESNELHALSISVAATPAEWAAKAQ
>NMB0217 putative RNA polymerase sigma-54 factor RpoN
MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNPLLERKD
TDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPL
SDQEAACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLQHALTAL
KKFDPAGVAAADLNESLILQIERLGECAAKPAALHIVRNALDSIDGNRSQ
TLARIKKHLPQTDSGTLEAALDLIASLNPFPAAGFASSTPTPYSDEALAN
LLAFRGMEVSRRTIAKYRESFEIPAAHKRKTAE
>NMB0398 transcriptional regulator, ArsR family
MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPATAVSNHL
NRLRVEGLVDFTRYHRIIEYRLVSEEAAAILHTVRDLENKRVA
>NMB0646 ribonuclease inhibitor barstar
MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTNVERPIT
LVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE
>NMB0001 putative acetyltransferase
MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIHAYYGRC
LKDDELPLAFAAVDDSGILLGSAAVKRHDMESFPRYEYWLGDVFVLPEYR
GKGIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWVVVGRHFHNG
EWVTVMRLDVDKV
>NMB2144 putative sigma factor
MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSAYSAGDS
FQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFS
QNGHWTQEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEI
LGFSSDEIQQMCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK
>NMB1368 putative ATP-dependent RNA helicase
MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIMASAQTG
SGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAK
NMRWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFER
LEVLILDEADRMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLAR
KLTKDPEIIEVERVDDQGKIEEQLLYCDDMRHKNRLLDHILRDANIDQCV
IFTSTKAMTEVIADELYEKGFAANCLHGDMPQGWRNRTLMDLRKGRCKIL
VATDVAARGIDVPTITHVINYDLPKQAEDYVHRIGRTGRAGRTGIAITFA
EVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKGKGGWGDRK
SGGWRGDHKPSKEGFGGKTRGEGFKKEGFKRDGFKKTGEGFKGKRKAGDS
FAGKGERRYKDR
>NMB1967 transcriptional regulator, AraC family
MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTVTARCDF
CSSRLAEPYVSFVLLLEGSLDFGINRCRFQIDADGGKIVLIAVGEEVLFS
RYLYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWDLPPNLRGL
AASCLKAVPKGHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADA
MPSEDFSRTLNAAFADGAHQVNRLTDALNISERTLQRRMRDHFGITASEW
LHHKQMQHALYLLQNGGKSIGETAYLCGYRHVSSFTQAFRQYFGSTPAET
KKENR
>NMB1561 transcriptional regulator, DeoR family
MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIRELEEVGSL
KRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSI
GTTMEAVVSELVRRRGSLRVITNNIHAASIASARTDYTVIITSGVVRPLD
GGITGVATVDFINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIAN
ARVRFLGVDHSKFRSNALVRLGDITAFDKVFTDRLPDTAMQKMLKEAGVE
CLIADAV
>NMB0838 cold-shock domain family protein
MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSF
DVTTGPKGKQAANIQAA
>NMB2094 hypothetical protein
MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKMPKPVRE
LLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS
>NMB0381 cysB, cys regulon transcriptional activator
MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEIGIQIFI
RSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATT
HTQARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTE
RIDDHPELGKLPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEF
AFNAGSSIARAFSKARLEQPDVALAAADTDVLKTYVRLGLGVGLMAKMAY
NPDTDGDLQLVDAAHLFEPSPTWIALRSDTYLRGYAYDFIQAFAPHLTRE
KVDRILYTPISEDFSI
>NMB0287 dinG, probable ATP-dependent helicase DinG
MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRTLAREEG
GEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVAL
QEQLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYRLTQSNAQQNLL
GFEAPAVLWDSKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWL
KVTNDRHGCLKTACPNRPECPFYLARDVLETVDVVVANHDLLLADISMGG
GVILPAPENSFYCIDEAHHLPKKALSRFAAEHSWNIAVWTLEKLPQLTGK
IAALTDKAELANLADEAAASLLDSLHEWQFHLAEEPSLSLGVSENDRRTN
SEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVIGLNDALSAARREKEQ
DGALLDRLTSEFGLFIARIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGL
QWLPETTTLALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLI
SPTEAIGTLVLFSSRKQMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHR
AIEEGKASIIFGLDSFAEGLDLPGTACVQVIIAKLPFAMPDNPIEKTQNR
WIEQRGGNPFIEITVPEAGIKLIQAVGRLIRTEQDYGRVTILDNRIKTQR
YGQQLLAGLPPFKRIG
>NMB1430 greA, transcription elongation factor GreA
MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSENAEYEA
AKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETE
EHVIYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREY
DIIEVRYI
>NMB0689 greB, transcription elongation factor GreB
MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGDRSENGD
YLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATDQVFFGATVGLLRD
DGREQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGRE
EIEILSVEYIKID
>NMB1650 lrp, leucine-responsive regulatory protein
MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRLEREHYI
SGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHL
VSGEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPV
LDLD
>NMB1281 mfd, transcription-repair coupling factor
MTYPIPKPREKSRWPNLSQGSLPLALARYLPHKRLKVVLTQDAEQALRLQ
TAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADV
LFVPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSH
VVAAGEFAVRGGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISP
VSEIRLLPAHEFPTDSEAQKIFRSRFREEVDGNPNDAAVYKAVSNGHFGA
GVEYYLPLFFENELETLFDYIGEDALFVSLDDVHAEANRFWSDVKSRYAM
AQGDETYPPLLPQYLYLSADVFAGRLKNYGQVLPDVSGKEYTLPDLAVNR
QADEPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGLKAKPVSDW
QGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQPTPSPVGEGWGEGKAVA
AQTEFSAAAINPLPSPLPQEREQSAAAVSDSLKAAAVSTESSLPLGTSNL
HGQIRQQPAPSPVGEGWGEGKAVAAQTEFPASATNPLPSPLPQEREQSAA
AVSDDLKTKSSLHPVANNLHGQIRQQPTPSPVGEGWGEGKAVAAQTEFSA
AATNPLPSPLPQEREQSAAVVSDSLKAAAVSTESSLPPGKSNLHGQIQQQ
PAPSPVGEGWGEGKAVAAQSAIAVITESDLYQYVARSRIHNRRKKHAAVS
DGLLRDLAEINIGDPVVHEEHGIGRYMGLVTMDLGGETNEMMLLEYAGEA
QLYVPVSQLHLISRYSGQAHENIALHKLGSGAWNKAKRKAAEKARDTAAE
LLNLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIKDLT
QAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQ
NFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDD
IKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMAL
EGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHN
EVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLC
STIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTP
EYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQ
VGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPEDYCPD
IHERLVLYKRLAVCETVQQINTIHEELVDRFGLPEQPVKTLIESHHLRLM
AKELGIDAIDAAGEAVTVTFGKNNNVDPTEIILLIQNDKKYRLAGADKLR
FTAEMENIEVRINTVKNVLKTLQNRCLPK
>NMB1591 mtrA, transcriptional regulator MtrA
MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGSGYL
CIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVK
QCGNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLE
SKKPLTGTVSMVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGH
LIQKVIDKPEDEWNVDKMVAAANMSRAQLMRRFKSRVGLSPHAFVNHIRL
QKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRKEGGQ
K
>NMB1717 mtrR, trancscriptional regulator MtrR
MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTRGALYWH
FKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQ
SNDIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVEN
QDLADDLDKETAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDN
LENHPDLRRK
>NMB1642 nusA, N utilization substance protein A
MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHMDVRVQI
NRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEE
QLPNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRV
ERHGIIVEVVAGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGR
KQVILSRTSGDFLVKLYANEVPEIADGMLEIRAVARDPGQRAKVAVKAND
QRIDPQGTCIGVRGSRVNAVSNELSGERIDVVLWSPEPAQFVMSALSPAE
VSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVRLASDLTGWQLNIMTSA
EADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEVAYVPAAEL
LAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK
>NMB0683 nusB, N utilization substance protein B
MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKL
FFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYP
VIINEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR
>NMB0126 nusG, transcription antitermination protein NusG
MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEKVVDIRN
GRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPIS
QREAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYE
RNKLRVSVQIFGRETPVELEFSQVEKIN
>NMB1788 recG, ATP-dependent DNA helicase RecG
MMSPETRKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKD
APIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQ
KQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNG
LNQPTLRRIIQTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSF
TIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTAAALGGDGTLT
QALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAAL
SALTAIESGAQVAVMAPTEILAEQHFIKFKQWLEPLGIEVVRLFGSLRKK
AKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQT
ALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAA
LMVIEHAERMGLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVI
YEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEEDLHLLEQARE
TAPMLIEQNPEIVEAHLARWLSGREGYLGV
>NMB1735 relA, GTP pyrophosphokinase
MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWLLAQEHYPA
DAATPYGEPLPDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLV
SERCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAM
VTDIRVVLIKLAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGV
WQLKWQLEDLGFRHQKPEKYREIALLLDEKRTERLEYIENFLNILRGELK
KYNVHFEVAGRPKHIYSIYKKMVKKKLSFDGLFDIRAVRILVDTVPECYT
TLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTVIVGPEDKGVEVQIRTF
DMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWRENMAESGKED
LAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRA
YIRQQNADTVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAV
GQGEISNRAIQKACGTLNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGED
GLMTTLAKCCKPAPPDDIIGFVTRERGISVHRKTCPSFQHLAEHAPEKVL
DASWAALQEGQVFAVDIEIRAQDRSGLLRDVSDALARHKLNVTAVQTQSR
DLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL
>NMB0617 rho, transcription termination factor Rho
MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMKKGEGFT
CSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGS
VRVPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERD
LKSEENLTGRAIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYP
EVELIVLLIDERPEEVTEMSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKA
KRMVEHKKDVVILLDSITRLARAYNTVVPTSGKILTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLDRRMA
EKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDEIEAAEFLI
GKIKASKNNDDFFELMRGK
>NMB0686 rnc, ribonuclease III
MKDDVLKQQAHAAIQKKLGYAFRDISLLRQALTHRSHHAKHNERFEFVGD
SILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLY
LGAGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVR
RADFQNQAKDGKTALQEALQARRFALPKYRIEEQIGYANDSMFVISCDLG
ELGFVCRAKGTSRKAAEQEAAKEALKWLEEKLPLKRKKK
>NMB0168 rpoA, DNA-directed RNA polymerase, alpha subunit
MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALRRILLSS
MNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQL
VLKKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRG
YQSVSGRQVVRDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKL
VLDIETDGSIDPEEAVRSAARILIDQMSIFADLQGTPVEEVEEKAPPIDP
VLLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLN
EIKEVLASKGLTLGSKLEAWPPVGLEKP
>NMB0132 rpoB, DNA-directed RNA polymerase, beta subunit
MCMNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKR
TDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAA
PLRARIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERV
IVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLL
YFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSSNGVQTDLVAD
RLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLL
GKALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQ
GAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSED
SYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLS
VEDIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARV
ERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPL
SEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGL
INSLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANA
DLDSDGNLIGDLVTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFL
EHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSATAIVARRG
GVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
KAGDVLQRGDLVADGASTDFGELALGQNMTIAFMPWNGYNYEDSILISEK
VAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIV
YIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMP
TGMSGTVIDVQVFTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDA
FDRIERMIVGQKANGGPMKLAKGSEITTEYLAGLPSRHDWFDIRLTDEDL
AKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQKMVKVFIAIK
RRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPSRM
NIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKED
LDALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEV
EKLGFNDSKTQITLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARST
GPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
NGRTKMYENIVKGEHKIDAGMPESFNVLVKEIRSLGLDIDLERY
>NMB0133 rpoC, DNA-directed RNA polymerase, beta' subunit
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRT
FKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVR
RERMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTD
PGMTPLQRRQLLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEI
EILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPD
LRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVD
YSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAK
KLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEP
IIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKI
TVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPK
EKAALLAEANAEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMM
DNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIKQLSGMRGLMA
KPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYLTR
RLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDV
VDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAAS
QVEAKSNGTARFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKV
PYGAILLVQDGMAIKAGQTLATWDPHTRPMITEHAGMVKFENVEEGVTVA
KQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDENGVEICIPGTSTP
VSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVAELFE
ARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVK
ISDKHIEVIIRQMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGK
EPARYENVLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKQDELRGL
KENVIVGRLIPAGTGLTYHRSRHQQWQEVEQETAETQVTDE
>NMB1538 rpoD, RNA polymerase sigma factor RpoD
MSRNQNHEEYQDDTRPLSIEEQRARLRQLIIMGKERGYITYSEINDALPD
DMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAE
AALSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMV
QAISACPGSIAEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHL
ETTAPEKPSNDNSDENEDDEESEEDADEISAANLAELKQKVIGHFAQIEK
DYKKMIGRLEKHHSRHKDYLAYRDAIANKLLEVRFATRQIDSLSSSLRGK
VENIRKLEREIRDICLDRVHMERDYFIQNFLPEITNLEWIEEEIAKGRVW
SDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSSEKETAAAK
QEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGE
EPDSAKLAELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDA
NNVAPADAAMYTSLHEVTKEILESLTPREAKVLRMRFGIDMNTDHTLEEV
GRQFDVTRERIRQIEAKALRKLRHPTRSDRLRSFLDSEDSKL
>NMB0712 rpoH, RNA polymerase sigma-32 factor
MSQMNNAFALPAIQSGNGSLEQYIHTVNRIPMLTQEEETRLAERQHKGDL
NAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGR
GARLFSFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLN
ALSPKEAQDIADDLGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPID
WLADHDSEPSRQLSKQAHYALQTEGLQNALAQLDDRSRRIVESRWLQDDG
GLTLHQLAAEYGVSAERIRQIEAKAMQKLRGFLTEEAEAV
>NMB1660 rpoZ, DNA-directed RNA polymerase, omega subunit
MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNNKPTVTA
LREIAAGHIGTELLTRNK
>NMB1659 spoT, guanosine-3`,5`-bis(diphosphate)3`-pyrophosphohy drolase
MPAPQPSAPYDPLTAEARALLFHTASYLKPEEQAELEKAVAYAFRAHDGQ
TRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAA
VFGNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKL
ADRLHNMRTLGSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSF
QNLHPNRYETLKKAMDKSRKNRQDVVGKVLRAFGQRLVGANIEAKIKGRE
KNLYGIHQKMMAKKLRFAEVMDIYGFRVIVNSIPACYAALGALHTLYQPK
PGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQIRTKEMDAVAEGGIAG
HWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHVKVDLFPNE
IYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGE
SLLQKALSSLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLP
VYVAMHIAELAGEHFGSEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRL
LLVKGKGMIIHRDTCPTLLKSDPEQQLDADWENMNGQNYRVGLQVQSEDS
HGLLALMAQAISDSGADIESVETPSKSQSGTEGFVEFKFLLKVKNLNQLN
QIIQNLHSIPYIRKVIRS