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2024-05-03 13:45:16

Gene list

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COG category: Transcription
Organism: Listeria innocua Clip11262, Clip11262

Number of genes found: 255

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Listeria innocua Clip11262, Clip11262
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
'comK competence transcription factor (C-terminal part)chromosome CDS2445882 468 + 0.365385
ccpA catabolite control protein Achromosome CDS1651043 1008 - 0.353175
codY chromosome CDS1314013 780 + 0.352564
cspB chromosome CDS2146391 201 - 0.38806
cspD chromosome CDS2007937 201 + 0.427861
cspL chromosome CDS1393801 201 + 0.432836
dinG chromosome CDS2026589 2787 - 0.372802
glnR chromosome CDS1334062 369 + 0.387534
gltC transcription activator of glutamate synthase operon GltCchromosome CDS1859518 888 + 0.391892
hrcA transcription repressor of class I heat-shock gene HrcAchromosome CDS1513813 1038 - 0.375723
lin0019 chromosome CDS22966 741 + 0.318489
lin0030 transcriptional regulator LacI familychromosome CDS32164 1056 - 0.368371
lin0031 chromosome CDS33421 966 + 0.423395
lin0041 chromosome CDS43883 615 + 0.341463
lin0044 chromosome CDS46052 729 + 0.347051
lin0073 chromosome CDS78505 477 - 0.348008
lin0082 chromosome CDS82504 186 + 0.408602
lin0101 Protein gp66 [Bacteriophage A118]chromosome CDS91890 435 + 0.354023
lin0135 chromosome CDS125683 1032 + 0.337209
lin0149 chromosome CDS143949 294 - 0.316327
lin0157 chromosome CDS153411 834 + 0.365707
lin0161 chromosome CDS156389 354 - 0.378531
lin0195 chromosome CDS184384 2340 + 0.396154
lin0211 chromosome CDS202604 285 - 0.350877
lin0217 chromosome CDS209860 1215 + 0.373663
lin0244 chromosome CDS239491 585 + 0.393162
lin0253 chromosome CDS252104 780 + 0.408974
lin0261 chromosome CDS271618 459 + 0.331155
lin0291 chromosome CDS304380 417 + 0.407674
lin0299 chromosome CDS312819 504 + 0.357143
lin0315 chromosome CDS328882 714 + 0.389356
lin0322 chromosome CDS337513 864 - 0.336806
lin0340 chromosome CDS355068 675 + 0.460741
lin0350 chromosome CDS363055 903 + 0.334441
lin0351 chromosome CDS364120 840 + 0.35119
lin0370 chromosome CDS382547 765 + 0.362092
lin0371 chromosome CDS383377 411 + 0.367397
lin0379 chromosome CDS393344 771 + 0.387808
lin0383 chromosome CDS395862 948 + 0.317511
lin0390 chromosome CDS402673 714 - 0.383754
lin0395 chromosome CDS406952 921 - 0.397394
lin0400 chromosome CDS411681 762 - 0.406824
lin0413 chromosome CDS423541 426 + 0.368545
lin0416 chromosome CDS427069 651 + 0.322581
lin0425 chromosome CDS435688 1935 + 0.361757
lin0437 chromosome CDS447957 204 + 0.372549
lin0442 chromosome CDS451277 432 - 0.331019
lin0443 chromosome CDS451711 549 - 0.32969
lin0450 chromosome CDS459941 876 - 0.366438
lin0458 chromosome CDS478256 468 - 0.33547
lin0463 chromosome CDS483778 930 + 0.373118
lin0464 chromosome CDS484770 933 - 0.3612
lin0482 chromosome CDS506961 561 + 0.395722
lin0491 chromosome CDS514066 894 - 0.37472
lin0513 chromosome CDS533279 459 - 0.389978
lin0520 chromosome CDS541333 1005 + 0.41791
lin0527 chromosome CDS552271 753 + 0.390438
lin0530 chromosome CDS555433 741 - 0.365722
lin0539 chromosome CDS566225 969 - 0.389061
lin0551 chromosome CDS578649 948 - 0.361814
lin0584 chromosome CDS611715 729 + 0.399177
lin0608 chromosome CDS639252 333 + 0.324324
lin0611 chromosome CDS641366 501 + 0.363273
lin0615 chromosome CDS644354 462 + 0.361472
lin0621 chromosome CDS651549 444 + 0.355856
lin0623 chromosome CDS653025 534 + 0.367041
lin0627 chromosome CDS656278 1152 - 0.363715
lin0633 chromosome CDS659950 432 - 0.361111
lin0640 chromosome CDS669764 417 + 0.364508
lin0652 chromosome CDS682162 642 + 0.327103
lin0654 chromosome CDS685582 648 + 0.345679
lin0655 chromosome CDS686238 537 - 0.376164
lin0663 chromosome CDS692972 897 - 0.316611
lin0727 chromosome CDS749269 333 + 0.378378
lin0743 chromosome CDS767299 378 + 0.351852
lin0764 chromosome CDS786710 1119 - 0.352994
lin0766 chromosome CDS788776 651 + 0.34255
lin0770 chromosome CDS791983 867 - 0.409458
lin0778 chromosome CDS798741 2817 - 0.370252
lin0790 chromosome CDS815207 462 + 0.339827
lin0796 chromosome CDS821979 543 + 0.362799
lin0801 chromosome CDS826700 723 + 0.301521
lin0806 chromosome CDS835475 372 - 0.290323
lin0808 chromosome CDS836931 543 + 0.412523
lin0809 chromosome CDS837611 873 + 0.415808
lin0811 chromosome CDS839719 453 + 0.304636
lin0812 chromosome CDS840187 507 + 0.295858
lin0816 chromosome CDS844959 558 + 0.387097
lin0818 chromosome CDS846211 390 - 0.382051
lin0831 chromosome CDS863446 471 - 0.318471
lin0845 chromosome CDS880224 555 + 0.401802
lin0851 chromosome CDS884950 1026 - 0.358674
lin0859 chromosome CDS894912 1551 + 0.430045
lin0861 chromosome CDS897426 558 - 0.327957
lin0864 chromosome CDS899647 840 - 0.283333
lin0869 chromosome CDS904570 354 - 0.40113
lin0886 chromosome CDS920292 279 + 0.412186
lin0897 chromosome CDS928019 2178 + 0.380624
lin0901 chromosome CDS932896 714 + 0.386555
lin0909 chromosome CDS939317 393 + 0.384224
lin0926 chromosome CDS956421 657 + 0.362253
lin0947 chromosome CDS974540 690 - 0.376812
lin0954 chromosome CDS979634 846 + 0.328605
lin0957 chromosome CDS982537 723 + 0.383126
lin0975 chromosome CDS999271 438 - 0.399543
lin0983 chromosome CDS1006749 456 + 0.324561
lin0988 chromosome CDS1011144 426 + 0.373239
lin1009 chromosome CDS1031361 879 + 0.399317
lin1021 chromosome CDS1042653 639 + 0.370892
lin1025 chromosome CDS1045926 966 - 0.360248
lin1092 chromosome CDS1114550 453 + 0.395143
lin1096 chromosome CDS1117049 720 - 0.338889
lin1114 Regulatory protein similar to Salmonella typhimurium PocR proteinchromosome CDS1132770 885 - 0.355932
lin1152 chromosome CDS1166072 552 - 0.32971
lin1176 chromosome CDS1185406 312 + 0.371795
lin1183 chromosome CDS1191255 324 + 0.41358
lin1188 chromosome CDS1199781 453 + 0.333333
lin1214 chromosome CDS1229882 1413 + 0.354565
lin1221 chromosome CDS1236335 714 + 0.366947
lin1230 chromosome CDS1245851 396 - 0.340909
lin1234 chromosome CDS1249205 429 - 0.319347
lin1235 chromosome CDS1249793 186 + 0.387097
lin1255 chromosome CDS1262385 681 + 0.342144
lin1297 chromosome CDS1294014 222 - 0.355856
lin1340 chromosome CDS1337858 615 - 0.37561
lin1346 chromosome CDS1342687 507 - 0.360947
lin1348 chromosome CDS1344497 1200 - 0.323333
lin1360 chromosome CDS1359872 285 + 0.385965
lin1376 chromosome CDS1373245 969 + 0.377709
lin1396 chromosome CDS1389798 387 + 0.348837
lin1404 chromosome CDS1397098 450 + 0.351111
lin1442 chromosome CDS1441591 549 + 0.36612
lin1445 chromosome CDS1445655 531 - 0.335217
lin1448 chromosome CDS1448227 243 + 0.378601
lin1488 chromosome CDS1489127 1308 - 0.360092
lin1531 chromosome CDS1531887 483 - 0.378882
lin1542 chromosome CDS1542280 687 + 0.365357
lin1550 chromosome CDS1552490 423 + 0.41844
lin1597 chromosome CDS1604286 465 - 0.389247
lin1611 chromosome CDS1622375 1314 - 0.394216
lin1622 chromosome CDS1632451 438 - 0.399543
lin1659 chromosome CDS1669105 441 - 0.380952
lin1685 chromosome CDS1696845 3219 - 0.361603
lin1699 Portein gp28 [Bacteriophage A118]chromosome CDS1714724 450 + 0.348889
lin1742 chromosome CDS1745742 681 - 0.342144
lin1761 chromosome CDS1758978 225 - 0.328889
lin1762 chromosome CDS1759363 441 + 0.30839
lin1814 chromosome CDS1819857 906 - 0.34106
lin1827 chromosome CDS1832228 576 + 0.333333
lin1832 chromosome CDS1836130 2679 - 0.378499
lin1833 chromosome CDS1838943 1329 - 0.373213
lin1836 chromosome CDS1841753 369 - 0.403794
lin1838 chromosome CDS1843285 966 - 0.391304
lin1856 chromosome CDS1868885 678 - 0.320059
lin1899 chromosome CDS1915276 363 + 0.37741
lin1902 chromosome CDS1916898 435 + 0.374713
lin1925 chromosome CDS1939235 2049 - 0.400195
lin1940 chromosome CDS1956686 204 - 0.333333
lin1943 chromosome CDS1958558 1713 + 0.393462
lin1964 chromosome CDS1980872 423 - 0.340426
lin1991 chromosome CDS2007135 429 - 0.347319
lin2064 chromosome CDS2079186 597 - 0.427136
lin2076 chromosome CDS2090906 621 - 0.381643
lin2102 chromosome CDS2119423 1011 - 0.391691
lin2104 chromosome CDS2121247 948 - 0.404008
lin2111 chromosome CDS2126950 702 - 0.337607
lin2112 chromosome CDS2127654 732 - 0.377049
lin2193 chromosome CDS2212183 585 - 0.364103
lin2204 chromosome CDS2224614 1401 - 0.420414
lin2212 chromosome CDS2232441 762 + 0.374016
lin2222 chromosome CDS2242026 462 + 0.341991
lin2233 chromosome CDS2256038 966 - 0.371636
lin2243 chromosome CDS2266424 1458 - 0.314815
lin2246 chromosome CDS2270223 474 + 0.362869
lin2248 chromosome CDS2271304 648 - 0.333333
lin2250 chromosome CDS2273258 855 - 0.376608
lin2267 chromosome CDS2287256 879 - 0.358362
lin2276 chromosome CDS2295238 1368 - 0.392544
lin2279 chromosome CDS2298908 564 + 0.356383
lin2291 chromosome CDS2320908 267 - 0.29588
lin2303 chromosome CDS2334924 453 - 0.370861
lin2313 chromosome CDS2345780 345 - 0.313043
lin2335 chromosome CDS2369364 879 - 0.359499
lin2343 chromosome CDS2378893 390 - 0.325641
lin2361 chromosome CDS2393275 876 - 0.319635
lin2397 chromosome CDS2429269 573 - 0.382199
lin2421 chromosome CDS2441522 252 - 0.289683
lin2422 chromosome CDS2441922 483 + 0.3706
lin2428 chromosome CDS2446397 348 - 0.310345
lin2431 chromosome CDS2449671 753 - 0.341301
lin2444 chromosome CDS2461046 537 - 0.420857
lin2446 chromosome CDS2462385 900 + 0.36
lin2461 chromosome CDS2480505 471 - 0.384289
lin2464 chromosome CDS2484305 1515 - 0.361056
lin2465 chromosome CDS2492894 759 - 0.393939
lin2499 chromosome CDS2523282 444 - 0.398649
lin2516 chromosome CDS2539762 696 - 0.37069
lin2530 chromosome CDS2551367 858 - 0.354312
lin2535 chromosome CDS2554369 897 - 0.352285
lin2541 chromosome CDS2566232 909 + 0.305831
lin2543 chromosome CDS2567675 2382 - 0.390848
lin2554 chromosome CDS2579601 1047 - 0.415473
lin2558 chromosome CDS2585830 609 - 0.357964
lin2583 chromosome CDS2608037 426 - 0.342723
lin2589 chromosome CDS2612970 1257 - 0.356404
lin2600 chromosome CDS2618683 681 - 0.330396
lin2605 chromosome CDS2622328 192 - 0.328125
lin2607 chromosome CDS2623190 324 + 0.351852
lin2628 chromosome CDS2644105 201 - 0.363184
lin2636 chromosome CDS2653592 306 - 0.382353
lin2659 chromosome CDS2678303 687 - 0.378457
lin2662 chromosome CDS2680730 1050 + 0.368571
lin2705 chromosome CDS2725494 537 - 0.38175
lin2728 chromosome CDS2747511 678 - 0.427729
lin2734 chromosome CDS2755518 888 - 0.38964
lin2740 chromosome CDS2767544 423 - 0.399527
lin2807 chromosome CDS2822927 480 - 0.4
lin2826 chromosome CDS2839477 696 - 0.448276
lin2837 chromosome CDS2855437 567 - 0.324515
lin2846 chromosome CDS2863775 852 + 0.361502
lin2870 chromosome CDS2887320 735 + 0.405442
lin2871 chromosome CDS2888108 462 + 0.419913
lin2874 chromosome CDS2890439 450 - 0.382222
lin2876 chromosome CDS2892024 456 + 0.385965
lin2880 chromosome CDS2894028 957 - 0.401254
lin2882 chromosome CDS2896479 690 - 0.402899
lin2889 chromosome CDS2902721 252 - 0.388889
lin2907 chromosome CDS2926635 885 + 0.431638
lin2909 chromosome CDS2927860 735 - 0.389116
lin2924 chromosome CDS2945095 759 - 0.367589
lin2926 chromosome CDS2946330 855 - 0.385965
lin2927 chromosome CDS2947365 807 - 0.370508
lin2928 chromosome CDS2948155 906 - 0.421634
lin2947 chromosome CDS2967155 528 - 0.420455
lin2960 chromosome CDS2981846 423 - 0.411348
lin2974 chromosome CDS2995943 1026 + 0.367446
lin2983 chromosome CDS3006731 981 + 0.334353
lisR two-component response regulatorchromosome CDS1409425 681 + 0.372981
mfd transcription-repair coupling factorchromosome CDS240860 3540 + 0.39322
nusA chromosome CDS1358739 1119 + 0.396783
nusG transcription antitermination factorchromosome CDS286917 534 + 0.378277
parB Partition protein ParB homolgchromosome CDS2943265 852 - 0.359155
phoP two-component response phosphate regulatorchromosome CDS2661314 711 - 0.35865
relA chromosome CDS1560603 2217 - 0.367614
resD chromosome CDS2077548 717 - 0.387727
rho chromosome CDS2712433 1272 - 0.375786
rncS chromosome CDS1934543 690 - 0.376812
rpoA chromosome CDS2783041 945 - 0.373545
rpoB RNA polymerase (beta subunit)chromosome CDS291763 3555 + 0.419972
rpoC RNA polymerase (beta' subunit)chromosome CDS295487 3606 + 0.415141
rpoD RNA polymerase sigma factor RpoDchromosome CDS1492503 1125 - 0.403556
rsbU chromosome CDS922801 1005 + 0.351244
sigB RNA polymerase sigma-37 factor (sigma-B)chromosome CDS924734 780 + 0.371795
sigH RNA polymerase sigma-30 factor (sigma-H)chromosome CDS285730 606 + 0.382838
sigL RNA polymerase sigma-54 factor (sigma-L)chromosome CDS2581090 1344 - 0.373512