Gene list
Applied filters:
COG category: Transcription
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
Number of genes found: 342
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| Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| HCM1.207c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM1 | CDS | 155387 | 378 | - | 0.484127 | |
| HCM1.244c | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | pHCM1 | CDS | 179823 | 687 | - | 0.417758 | |
| HCM1.248 | putative transcriptional regulator (partial) | SubName: Full=Putative transcriptional regulator (Partial); | pHCM1 | CDS | 183095 | 126 | + | 0.420635 | |
| HCM1.58c | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; SubName: Full=Uncharacterized protein; | pHCM1 | CDS | 36134 | 1158 | - | 0.495682 | |
| HCM1.63c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM1 | CDS | 40516 | 1077 | - | 0.389972 | |
| HCM1.87 | putative plasmid partition protein | SubName: Full=Putative partition protein; SubName: Full=Putative plasmid partition protein; SubName: Full=RepA; | pHCM1 | CDS | 57992 | 1008 | + | 0.39881 | |
| HCM2.0045c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM2 | CDS | 34153 | 360 | - | 0.525 | |
| HCM2.0076c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM2 | CDS | 64553 | 669 | - | 0.559043 | |
| HCM2.0077c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM2 | CDS | 65221 | 699 | - | 0.532189 | |
| HCM2.0078 | putative helicase | SubName: Full=Putative helicase; | pHCM2 | CDS | 65984 | 1560 | + | 0.514744 | |
| HCM2.0100c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM2 | CDS | 79214 | 642 | - | 0.538941 | |
| HCM2.0129c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM2 | CDS | 102799 | 495 | - | 0.519192 | |
| STY0014 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 15020 | 948 | + | 0.410338 | |
| STY0017 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 17049 | 444 | - | 0.382883 | |
| STY0035 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 32549 | 450 | - | 0.368889 | |
| STY0036 | putative transcriptional regulator (lysR family) | SubName: Full=Putative transcriptional regulator (LysR family); | chromosome | CDS | 33368 | 996 | + | 0.384538 | |
| STY0038 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 34511 | 306 | - | 0.382353 | |
| STY0048 | transcriptional activator protein NhaR | SubName: Full=Transcriptional activator protein NhaR; | chromosome | CDS | 47414 | 900 | + | 0.506667 | |
| STY0111 | probable ATP-dependent helicase HepA | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 109800 | 2907 | - | 0.570347 | |
| STY0121 | arabinose operon regulatory protein | SubName: Full=Arabinose operon regulatory protein; | chromosome | CDS | 123055 | 846 | + | 0.536643 | |
| STY0134 | probable activator protein in leuABCD operon | SubName: Full=Probable activator protein in leuABCD operon; | chromosome | CDS | 135983 | 945 | + | 0.48254 | |
| STY0138 | fructose repressor | RecName: Full=Catabolite repressor/activator; AltName: Full=Fructose repressor; | chromosome | CDS | 139751 | 1005 | + | 0.564179 | |
| STY0159 | putative lysR-family transcriptional regulator | SubName: Full=Putative LysR-family transcriptional regulator; SubName: Full=Putative lysR-family transcriptional regulator; | chromosome | CDS | 164472 | 942 | + | 0.516985 | |
| STY0174 | pyruvate dehydrogenase complex repressor | RecName: Full=Pyruvate dehydrogenase complex repressor; | chromosome | CDS | 178463 | 765 | + | 0.568627 | |
| STY0186 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 195592 | 768 | + | 0.548177 | |
| STY0232 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 243080 | 1158 | + | 0.544905 | |
| STY0262 | ROF protein | SubName: Full=ROF protein; | chromosome | CDS | 277638 | 255 | - | 0.443137 | |
| STY0377 | possible transmembrane regulator | SubName: Full=Possible transmembrane regulator; | chromosome | CDS | 388659 | 744 | + | 0.395161 | |
| STY0381 | possible transcriptionl regulator | SubName: Full=Possible transcriptionl regulator; | chromosome | CDS | 391048 | 528 | + | 0.407197 | |
| STY0395 | AraC-family transcriptional regulator | SubName: Full=AraC-family transcriptional regulator; | chromosome | CDS | 403089 | 1005 | + | 0.58209 | |
| STY0426 | hypothetical ROK-family protein | SubName: Full=Hypothetical ROK-family protein; | chromosome | CDS | 435467 | 909 | + | 0.577558 | |
| STY0432 | phosphate regulon transcriptional regulatory protein PhoB | SubName: Full=Phosphate regulon transcriptional regulatory protein PhoB; | chromosome | CDS | 442289 | 690 | + | 0.547826 | |
| STY0448 | putative deoR-family transcriptional regulator | SubName: Full=Putative DeoR-family transcriptional regulator; SubName: Full=Putative deoR-family transcriptional regulator; | chromosome | CDS | 457903 | 693 | + | 0.522367 | |
| STY0457 | N utilization substance protein B | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 463736 | 420 | + | 0.52619 | |
| STY0478 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 483689 | 285 | + | 0.410526 | |
| STY0521 | potential acrAB operon repressor | SubName: Full=Potential acrAB operon repressor; | chromosome | CDS | 526616 | 654 | + | 0.46789 | |
| STY0562 | hypothetical lysR-family transcriptional regulator | RecName: Full=HTH-type transcriptional activator AllS; | chromosome | CDS | 568074 | 927 | - | 0.531823 | |
| STY0611 | hypothetical araC-family transcriptional regulator | SubName: Full=Hypothetical araC-family transcriptional regulator; | chromosome | CDS | 610886 | 855 | - | 0.587134 | |
| STY0622 | putative tetR-family transcriptional regulator | SubName: Full=Putative TetR-family transcriptional regulator; SubName: Full=Putative tetR-family transcriptional regulator; | chromosome | CDS | 622264 | 582 | - | 0.525773 | |
| STY0648 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 650170 | 618 | - | 0.504854 | |
| STY0664 | regulator of nucleoside diphosphate kinase | RecName: Full=Regulator of nucleoside diphosphate kinase; | chromosome | CDS | 664173 | 411 | - | 0.583942 | |
| STY0678 | cold shock-like protein cspE | SubName: Full=Cold shock-like protein cspE; | chromosome | CDS | 677679 | 210 | + | 0.438095 | |
| STY0684 | lysR-family transcriptional regulator | SubName: Full=LysR-family transcriptional regulator; | chromosome | CDS | 680796 | 954 | - | 0.506289 | |
| STY0703 | putative sigma-54 dependent transcriptional regulator | SubName: Full=Putative sigma-54 dependent transcriptional regulator; | chromosome | CDS | 699294 | 1929 | + | 0.498186 | |
| STY0720 | N-acetylglucosamine repressor | SubName: Full=N-acetylglucosamine repressor; | chromosome | CDS | 717672 | 1221 | - | 0.535627 | |
| STY0730 | lysR-family transcriptional regulator | SubName: Full=LysR-family transcriptional regulator; | chromosome | CDS | 731339 | 927 | - | 0.563107 | |
| STY0743 | KDP operon transcriptional regulatory protein | SubName: Full=KDP operon transcriptional regulatory protein; | chromosome | CDS | 742195 | 678 | - | 0.564897 | |
| STY0854 | hypothetical tetR-family transcriptional regulator | SubName: Full=Hypothetical tetR-family transcriptional regulator; | chromosome | CDS | 848481 | 675 | - | 0.52 | |
| STY0855 | putative ATP-dependent RNA helicase rhlE | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 849385 | 1368 | + | 0.584795 | |
| STY0876 | transcriptional regulator (iron dependant repressor family) | RecName: Full=Transcriptional regulator MntR; AltName: Full=Manganese transport regulator; | chromosome | CDS | 866783 | 474 | + | 0.523207 | |
| STY0897 | deoxyribose operon repressor | SubName: Full=Deoxyribose operon repressor; | chromosome | CDS | 891157 | 759 | - | 0.517787 | |
| STY0957 | leucine-responsive regulatory protein | SubName: Full=Leucine-responsive regulatory protein; | chromosome | CDS | 947280 | 495 | + | 0.488889 | |
| STY1005 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1003596 | 462 | - | 0.484848 | |
| STY1020 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 1014982 | 405 | - | 0.45679 | |
| STY1024 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 1017923 | 348 | + | 0.545977 | |
| STY1094 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1072136 | 606 | + | 0.5 | |
| STY1106 | putative transcriptional regulator (pseudogene) | chromosome | CDS | 1081781 | 1491 | + | 0.503689 | ||
| STY1157 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1116598 | 639 | + | 0.543036 | |
| STY1163 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1125366 | 882 | - | 0.495465 | |
| STY1179 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1140027 | 627 | - | 0.403509 | |
| STY1211 | negative regulator of flagellin synthesis (anti-sigma factor) | SubName: Full=Negative regulator of flagellin synthesis; SubName: Full=Negative regulator of flagellin synthesis (Anti-sigma factor); | chromosome | CDS | 1167321 | 294 | - | 0.510204 | |
| STY1253 | putative TetR-family regulatory protein | SubName: Full=Putative TetR-family regulatory protein; | chromosome | CDS | 1206213 | 636 | - | 0.537736 | |
| STY1256 | transcription-repair coupling factor (TrcF) | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1208383 | 3447 | - | 0.56832 | |
| STY1260 | putative ROK-family protein | RecName: Full=N-acetyl-D-glucosamine kinase; EC=2.7.1.59; AltName: Full=GlcNAc kinase; | chromosome | CDS | 1215333 | 909 | + | 0.565457 | |
| STY1271 | transcriptional regulatory protein PhoP, regulator of virulence determinants | RecName: Full=Virulence transcriptional regulatory protein PhoP; | chromosome | CDS | 1228174 | 675 | - | 0.512593 | |
| STY1285 | nitrate/nitrite response regulator protein NarL | SubName: Full=Nitrate/nitrite response regulator protein NarL; | chromosome | CDS | 1239520 | 651 | - | 0.533026 | |
| STY1337 | cys regulon transcriptional activator | SubName: Full=Cys regulon transcriptional activator; | chromosome | CDS | 1296327 | 975 | + | 0.518974 | |
| STY1347 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1306046 | 753 | - | 0.498008 | |
| STY1350 | exoribonuclease II | RecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; | chromosome | CDS | 1309430 | 1935 | - | 0.557106 | |
| STY1370 | psp operon transcriptional activator PspF | SubName: Full=Psp operon transcriptional activator PspF; | chromosome | CDS | 1326223 | 981 | - | 0.545362 | |
| STY1371 | phage shock protein A | SubName: Full=Phage shock protein A; | chromosome | CDS | 1327374 | 669 | + | 0.512706 | |
| STY1373 | phage shock protein C | SubName: Full=Phage shock protein C; | chromosome | CDS | 1328326 | 360 | + | 0.522222 | |
| STY1378 | transcriptional regulatory protein TyrR | RecName: Full=Transcriptional regulatory protein TyrR; | chromosome | CDS | 1332068 | 1542 | + | 0.53048 | |
| STY1386 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1339652 | 906 | + | 0.545254 | |
| STY1390 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1342585 | 591 | + | 0.57022 | |
| STY1393 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1345254 | 852 | - | 0.38615 | |
| STY1400 | conserved hypothetical DNA-binding protein | SubName: Full=Conserved hypothetical DNA-binding protein; | chromosome | CDS | 1352022 | 603 | + | 0.505804 | |
| STY1446 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1398335 | 792 | - | 0.516414 | |
| STY1459 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 1409479 | 537 | + | 0.528864 | |
| STY1466 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1415872 | 1425 | + | 0.527719 | |
| STY1477 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1428801 | 666 | + | 0.46997 | |
| STY1490 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1446547 | 579 | - | 0.57513 | |
| STY1514 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1470680 | 489 | - | 0.474438 | |
| STY1521 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1477754 | 792 | - | 0.467172 | |
| STY1537 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1491328 | 873 | + | 0.56701 | |
| STY1540 | multiple antibiotic resistance protein MarR | RecName: Full=Multiple antibiotic resistance protein MarR; | chromosome | CDS | 1494534 | 378 | + | 0.489418 | |
| STY1541 | multiple antibiotic resistance protein MarA | RecName: Full=Multiple antibiotic resistance protein MarA; | chromosome | CDS | 1494880 | 435 | + | 0.455172 | |
| STY1551 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1503716 | 687 | + | 0.508006 | |
| STY1576 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1525912 | 1161 | - | 0.515935 | |
| STY1578 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1527260 | 900 | - | 0.564444 | |
| STY1647 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; | chromosome | CDS | 1575105 | 732 | + | 0.530055 | |
| STY1685 | putative TetR-family transcriptional regulator | SubName: Full=Putative TetR-family transcriptional regulator; | chromosome | CDS | 1612050 | 600 | + | 0.551667 | |
| STY1692 | purine nucleotide synthesis repressor | RecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; | chromosome | CDS | 1617786 | 1026 | + | 0.542885 | |
| STY1693 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1618808 | 933 | - | 0.564845 | |
| STY1730 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1650681 | 729 | + | 0.539095 | |
| STY1798 | putative cel operon repressor | SubName: Full=Putative cel operon repressor; | chromosome | CDS | 1718435 | 843 | - | 0.431791 | |
| STY1839 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1756268 | 795 | - | 0.549686 | |
| STY1855 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 1764926 | 849 | - | 0.462898 | |
| STY1856 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 1765843 | 594 | - | 0.367003 | |
| STY1934 | fatty acid-fatty acyl responsive DNA-binding protein | RecName: Full=Fatty acid metabolism regulator protein; | chromosome | CDS | 1827491 | 720 | - | 0.522222 | |
| STY1951 | putative ATP-dependent helicase | SubName: Full=Putative ATP-dependent helicase; | chromosome | CDS | 1840118 | 1911 | - | 0.561486 | |
| STY1967 | cold shock-like protein CspC | RecName: Full=Cold shock-like protein CspC; Short=CSP-C; | chromosome | CDS | 1857152 | 210 | - | 0.471429 | |
| STY1991 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 1876603 | 420 | - | 0.42381 | |
| STY2061 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1921742 | 813 | - | 0.501845 | |
| STY2065 | putative cro repressor | SubName: Full=Putative cro repressor; | chromosome | CDS | 1924564 | 243 | - | 0.444444 | |
| STY2066 | putative regulator | SubName: Full=Putative regulator; | chromosome | CDS | 1924903 | 420 | + | 0.430952 | |
| STY2095 | putative hex-regulon repressor | SubName: Full=Putative hex-regulon repressor; | chromosome | CDS | 1947124 | 870 | + | 0.511494 | |
| STY2158 | cell-division regulatory protein | SubName: Full=Cell-division regulatory protein; | chromosome | CDS | 2003884 | 723 | - | 0.489627 | |
| STY2190 | colanic acid capsullar biosynthesis activation protein A | RecName: Full=Transcriptional regulatory protein RcsA; | chromosome | CDS | 2031045 | 624 | + | 0.386218 | |
| STY2206 | UmuD protein | SubName: Full=UmuD protein; EC=3.4.21.-; | chromosome | CDS | 2044752 | 420 | - | 0.5 | |
| STY2278 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2104261 | 915 | - | 0.527869 | |
| STY2344 | putative two-component system response regulator | SubName: Full=Putative two-component system response regulator; | chromosome | CDS | 2182500 | 723 | + | 0.532503 | |
| STY2374 | putative gntR-family transcriptional regulator | SubName: Full=Putative GntR-family transcriptional regulator; SubName: Full=Putative gntR-family transcriptional regulator; | chromosome | CDS | 2205062 | 747 | - | 0.534137 | |
| STY2388 | putative two-component system response regulator | RecName: Full=Transcriptional regulatory protein YehT; | chromosome | CDS | 2219326 | 720 | - | 0.505556 | |
| STY2390 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2221950 | 732 | + | 0.540984 | |
| STY2410 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2242465 | 909 | + | 0.546755 | |
| STY2425 | mgl repressor and galactose ultrainduction factor | SubName: Full=Mgl repressor and galactose ultrainduction factor; | chromosome | CDS | 2254472 | 1023 | - | 0.557185 | |
| STY2429 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 2258645 | 390 | - | 0.523077 | |
| STY2436 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2266905 | 864 | - | 0.549769 | |
| STY2460 | putative helicase | SubName: Full=Putative helicase; | chromosome | CDS | 2290935 | 1761 | + | 0.569563 | |
| STY2472 | nitrate/nitrite response regulator protein NarP | SubName: Full=Nitrate/nitrite response regulator protein; SubName: Full=Nitrate/nitrite response regulator protein NarP; | chromosome | CDS | 2303653 | 648 | + | 0.524691 | |
| STY2495 | regulator of capsule synthesis B component | RecName: Full=Transcriptional regulatory protein RcsB; | chromosome | CDS | 2326944 | 651 | + | 0.493088 | |
| STY2510 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2344196 | 879 | + | 0.47554 | |
| STY2522 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2357030 | 783 | - | 0.508301 | |
| STY2560 | NADH dehydrogenase operon transcriptional regulator | SubName: Full=NADH dehydrogenase operon transcriptional regulator; | chromosome | CDS | 2395148 | 939 | - | 0.521832 | |
| STY2575 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2412405 | 1020 | + | 0.554902 | |
| STY2591 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2427893 | 1428 | + | 0.521709 | |
| STY2605 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 2441517 | 249 | + | 0.493976 | |
| STY2655 | xanthosine operon transcriptional regulator | SubName: Full=Xanthosine operon transcriptional regulator; | chromosome | CDS | 2493002 | 885 | - | 0.502825 | |
| STY2660 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2497378 | 927 | - | 0.568501 | |
| STY2691 | ethanolamine operon transcriptional regulator | SubName: Full=Ethanolamine operon transcriptional regulator; | chromosome | CDS | 2524275 | 1053 | - | 0.545109 | |
| STY2790 | conserved hypothetical protein | RecName: Full=HTH-type transcriptional regulator IscR; | chromosome | CDS | 2646961 | 495 | - | 0.553535 | |
| STY2800 | stationary phase inducible protein CsiE | SubName: Full=Stationary phase inducible protein CsiE; | chromosome | CDS | 2655185 | 1278 | + | 0.547731 | |
| STY2804 | transcriptional activator cadC | SubName: Full=Transcriptional activator CadC; SubName: Full=Transcriptional activator cadC; | chromosome | CDS | 2660730 | 1545 | + | 0.476375 | |
| STY2821 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2684813 | 912 | + | 0.432018 | |
| STY2827 | ribonuclease III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 2688914 | 681 | - | 0.528634 | |
| STY2833 | RNA polymerase sigma-E factor (sigma-24) | RecName: Full=ECF RNA polymerase sigma-E factor; AltName: Full=RNA polymerase sigma-E factor; AltName: Full=Sigma-24; | chromosome | CDS | 2695031 | 576 | - | 0.512153 | |
| STY2836 | ATP-dependent RNA helicase SrmB | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 2698505 | 1335 | + | 0.548315 | |
| STY2914 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2797347 | 678 | + | 0.564897 | |
| STY2917 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2798936 | 300 | + | 0.51 | |
| STY2939 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2814016 | 531 | + | 0.487759 | |
| STY2957 | glucitol operon activator protein | SubName: Full=Glucitol operon activator protein; | chromosome | CDS | 2833969 | 360 | + | 0.541667 | |
| STY2959 | glucitol operon repressor | SubName: Full=Glucitol operon repressor; | chromosome | CDS | 2834527 | 774 | + | 0.498708 | |
| STY2961 | putative sigma-54-dependent transriptional regulator | RecName: Full=Anaerobic nitric oxide reductase transcription regulator NorR; | chromosome | CDS | 2836255 | 1521 | - | 0.594346 | |
| STY2977 | hydrogenase isoenzymes formation protein HypB | SubName: Full=Hydrogenase isoenzymes formation protein HypB; | chromosome | CDS | 2853114 | 873 | + | 0.578465 | |
| STY2996 | AraC-family transcriptional regulator | SubName: Full=AraC-family transcriptional regulator; | chromosome | CDS | 2869850 | 930 | + | 0.403226 | |
| STY3027 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2897992 | 528 | + | 0.471591 | |
| STY3037 | possible LysR-family transcriptional regulator | SubName: Full=Possible LysR-family transcriptional regulator; | chromosome | CDS | 2905042 | 933 | + | 0.550911 | |
| STY3044 | DeoR-family trancriptional regulator | SubName: Full=DeoR-family trancriptional regulator; | chromosome | CDS | 2911407 | 765 | + | 0.559477 | |
| STY3045 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 2912190 | 405 | - | 0.530864 | |
| STY3093 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2957978 | 357 | - | 0.456583 | |
| STY3119 | l-fucose operon activator | SubName: Full=L-fucose operon activator; | chromosome | CDS | 2987534 | 711 | + | 0.499297 | |
| STY3122 | regulatory protein for glycine cleavage pathway | SubName: Full=Regulatory protein for glycine cleavage pathway; SubName: Full=Regulatory protein of glycine cleavage pathway; | chromosome | CDS | 2989810 | 918 | - | 0.503268 | |
| STY3155 | galactose operon repressor | SubName: Full=Galactose operon repressor; | chromosome | CDS | 3027580 | 1029 | + | 0.560739 | |
| STY3156 | possible regulatory protein | SubName: Full=Possible regulatory protein; | chromosome | CDS | 3028619 | 1023 | + | 0.568915 | |
| STY3165 | possible regulatory protein | SubName: Full=Possible regulatory protein; | chromosome | CDS | 3037910 | 864 | - | 0.550926 | |
| STY3220 | chromosome intitiation inhibitor | RecName: Full=Chromosome initiation inhibitor; AltName: Full=OriC replication inhibitor; | chromosome | CDS | 3088114 | 894 | + | 0.577181 | |
| STY3249 | conserved hypothetical protein | RecName: Full=UPF0301 protein YqgE; | chromosome | CDS | 3113788 | 564 | + | 0.52305 | |
| STY3293 | LysR-family transcriptional regulator | SubName: Full=LysR-family transcriptional regulator; | chromosome | CDS | 3139940 | 684 | + | 0.440058 | |
| STY3335 | probable AraC-family trancriptional regulatory protein | SubName: Full=Probable AraC-family trancriptional regulatory protein; | chromosome | CDS | 3178727 | 921 | - | 0.511401 | |
| STY3352 | possible AraC-family transcriptional regulator | SubName: Full=Possible AraC-family transcriptional regulator; | chromosome | CDS | 3196819 | 867 | - | 0.576701 | |
| STY3354 | probable two-component system response regulator. | RecName: Full=Transcriptional regulatory protein QseB; | chromosome | CDS | 3198301 | 660 | + | 0.554545 | |
| STY3390 | RNA polymerase sigma-70 factor | RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; | chromosome | CDS | 3233766 | 1983 | + | 0.528492 | |
| STY3415 | possible LysR-family transcriptional regulator | SubName: Full=Possible LysR-family transcriptional regulator; | chromosome | CDS | 3257518 | 897 | - | 0.567447 | |
| STY3428 | TDC operon transcriptional activator | SubName: Full=TDC operon transcriptional activator; | chromosome | CDS | 3269977 | 939 | - | 0.447284 | |
| STY3445 | galactitol utilization operon repressor | SubName: Full=Galactitol utilization operon repressor; | chromosome | CDS | 3288627 | 774 | + | 0.505168 | |
| STY3461 | ATP-dependent RNA helicase (dead-box protein) | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3301996 | 1941 | - | 0.573931 | |
| STY3468 | L factor | SubName: Full=L factor; | chromosome | CDS | 3312124 | 1503 | - | 0.525615 | |
| STY3477 | transcription elongation factor | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 3322453 | 477 | - | 0.509434 | |
| STY3485 | Ner-like regulatory protein | SubName: Full=Ner-like regulatory protein; | chromosome | CDS | 3329075 | 288 | + | 0.503472 | |
| STY3487 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3330734 | 294 | - | 0.496599 | |
| STY3499 | RNA polymerase sigma-54 factor (sigma-N) | RecName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 3338936 | 1434 | + | 0.540446 | |
| STY3516 | possible kinase | RecName: Full=N-acetylmannosamine kinase; EC=2.7.1.60; AltName: Full=ManNAc kinase; AltName: Full=N-acetyl-D-mannosamine kinase; | chromosome | CDS | 3359426 | 876 | - | 0.593607 | |
| STY3521 | putative GntR-family transcriptional regulator | RecName: Full=Transcriptional regulator NanR; | chromosome | CDS | 3363658 | 792 | - | 0.525253 | |
| STY3537 | possible transcriptional regulator | SubName: Full=Possible transcriptional regulator; | chromosome | CDS | 3378873 | 606 | - | 0.49505 | |
| STY3538 | possible GntR-family transcriptional regulator | SubName: Full=Possible GntR-family transcriptional regulator; | chromosome | CDS | 3379525 | 630 | - | 0.493651 | |
| STY3547 | probable LysR-family transcriptional regulator | SubName: Full=Probable LysR-family transcriptional regulator; | chromosome | CDS | 3386896 | 930 | + | 0.535484 | |
| STY3565 | Fis DNA-binding protein | RecName: Full=DNA-binding protein Fis; | chromosome | CDS | 3409864 | 297 | + | 0.464646 | |
| STY3582 | transcriptional activator | RecName: Full=Transcription antitermination protein RfaH; | chromosome | CDS | 3436091 | 489 | + | 0.490798 | |
| STY3595 | trans-activator of metE and metH | RecName: Full=HTH-type transcriptional regulator MetR; | chromosome | CDS | 3449980 | 954 | + | 0.584906 | |
| STY3638 | transcription termination factor | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 3494786 | 1260 | - | 0.529365 | |
| STY3649 | LysR-family regulatory protein for ilvC expression | RecName: Full=HTH-type transcriptional activator IlvY; | chromosome | CDS | 3506373 | 888 | + | 0.585586 | |
| STY3708 | possible LysR-family transcriptional regulatory protein | RecName: Full=HTH-type transcriptional regulator HdfR; AltName: Full=H-NS-dependent flhDC regulator; | chromosome | CDS | 3551580 | 837 | + | 0.514934 | |
| STY3731 | DNA-directed RNA polymerase, beta'-subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3576977 | 4224 | - | 0.546165 | |
| STY3732 | DNA-directed RNA polymerase, beta-subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3581277 | 4029 | - | 0.541822 | |
| STY3737 | transcription antitermination protein | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 3588262 | 546 | - | 0.545788 | |
| STY3747 | possible TetR-family trancriptional regulatory protein | RecName: Full=HTH-type transcriptional repressor FabR; | chromosome | CDS | 3604987 | 636 | - | 0.553459 | |
| STY3749 | hydrogen peroxide-inducible regulon activator | SubName: Full=Hydrogen peroxide-inducible regulon activator; | chromosome | CDS | 3607204 | 918 | - | 0.56427 | |
| STY3756 | putative AraC-family transcriptional regulator | SubName: Full=Putative AraC-family transcriptional regulator; | chromosome | CDS | 3618043 | 837 | + | 0.561529 | |
| STY3762 | putative GntR-family regulatory protein | SubName: Full=Putative GntR-family regulatory protein; | chromosome | CDS | 3624532 | 1482 | + | 0.602564 | |
| STY3770 | repressor of the methionine regulon | RecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; | chromosome | CDS | 3635967 | 318 | + | 0.518868 | |
| STY3776 | transcriptional repressor | SubName: Full=Transcriptional repressor; | chromosome | CDS | 3642207 | 1026 | + | 0.534113 | |
| STY3797 | putative regulatory protein | RecName: Full=Transcriptional regulator LsrR; | chromosome | CDS | 3662183 | 960 | + | 0.503125 | |
| STY3802 | putative GntR-family regulatory protein | SubName: Full=Putative GntR-family regulatory protein; | chromosome | CDS | 3665690 | 723 | - | 0.50899 | |
| STY3812 | two-component response regulatory protein | SubName: Full=Two-component response regulatory protein; | chromosome | CDS | 3674986 | 699 | + | 0.546495 | |
| STY3824 | L-rhamnose operon transcriptional activator | RecName: Full=HTH-type transcriptional activator RhaR; AltName: Full=L-rhamnose operon transcriptional activator RhaR; | chromosome | CDS | 3684525 | 849 | - | 0.499411 | |
| STY3825 | L-rhamnose operon regulatory protein | RecName: Full=HTH-type transcriptional activator RhaS; AltName: Full=L-rhamnose operon regulatory protein RhaS; | chromosome | CDS | 3685526 | 837 | - | 0.53644 | |
| STY3832 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 3691934 | 567 | - | 0.589065 | |
| STY3845 | putative CopG-family DNA-binding protein | SubName: Full=Putative CopG-family DNA-binding protein; | chromosome | CDS | 3703463 | 249 | - | 0.48996 | |
| STY3848 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3705233 | 447 | + | 0.474273 | |
| STY3849 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3705694 | 990 | - | 0.547475 | |
| STY3853 | putative DeoR-family transcriptional regulator | SubName: Full=Putative DeoR-family transcriptional regulator; | chromosome | CDS | 3708770 | 804 | - | 0.542289 | |
| STY3888 | hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region; putative GntR-family transcriptional regulator | SubName: Full=Hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region; | chromosome | CDS | 3749553 | 705 | + | 0.507801 | |
| STY3891 | ribose operon repressor | SubName: Full=Ribose operon repressor; | chromosome | CDS | 3751662 | 999 | - | 0.527528 | |
| STY3902 | regulatory protein | SubName: Full=Regulatory protein; | chromosome | CDS | 3764066 | 459 | + | 0.498911 | |
| STY3935 | putative LysR-family transcriptional regulator | RecName: Full=HTH-type transcriptional regulator YidZ; | chromosome | CDS | 3798276 | 903 | - | 0.54928 | |
| STY3944 | putative LysR-family transcriptioanl regulator | SubName: Full=Putative LysR-family transcriptioanl regulator; | chromosome | CDS | 3811353 | 909 | - | 0.542354 | |
| STY3979 | D-serine deaminase activator | SubName: Full=D-serine deaminase activator; | chromosome | CDS | 3845856 | 924 | + | 0.528139 | |
| STY3988 | putative DeoR-family transcriptional regulator | SubName: Full=Putative DeoR-family transcriptional regulator; | chromosome | CDS | 3853107 | 786 | - | 0.519084 | |
| STY3992 | Two-component system response regulator protein | SubName: Full=Two-component system response regulator protein; | chromosome | CDS | 3857652 | 591 | + | 0.590525 | |
| STY3997 | putative GntR-family transcriptional regulator | SubName: Full=Putative GntR-family transcriptional regulator; | chromosome | CDS | 3863614 | 744 | + | 0.409946 | |
| STY4005 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 3869336 | 324 | - | 0.481481 | |
| STY4048 | ATP-dependent DNA helicase | SubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; | chromosome | CDS | 3909336 | 2082 | - | 0.582133 | |
| STY4058 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 3918961 | 903 | + | 0.535991 | |
| STY4062 | putative TetR-family transcriptional regulator | RecName: Full=Nucleoid occlusion factor SlmA; | chromosome | CDS | 3922416 | 597 | - | 0.517588 | |
| STY4100 | putative lacI family transcriptional regulator regulator | SubName: Full=Putative lacI family transcriptional regulator; SubName: Full=Putative lacI family transcriptional regulator regulator; | chromosome | CDS | 3957949 | 1056 | + | 0.546402 | |
| STY4103 | putative L-lactate dehydrogenase operon regulator | SubName: Full=Putative L-lactate dehydrogenase operon regulator; | chromosome | CDS | 3960797 | 777 | - | 0.579151 | |
| STY4109 | mannitol operon repressor (mannitol repressor protein) | SubName: Full=Mannitol operon repressor; SubName: Full=Mannitol operon repressor (Mannitol repressor protein); | chromosome | CDS | 3968959 | 591 | - | 0.534687 | |
| STY4115 | putative sugar kinase | SubName: Full=Putative sugar kinase; | chromosome | CDS | 3977536 | 882 | - | 0.566893 | |
| STY4118 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3982461 | 813 | + | 0.546125 | |
| STY4131 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 3993461 | 801 | + | 0.523096 | |
| STY4136 | xylose operon regulatory protein | SubName: Full=Xylose operon regulatory protein; | chromosome | CDS | 3999540 | 1179 | - | 0.53011 | |
| STY4148 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4010135 | 468 | + | 0.41453 | |
| STY4151 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4011055 | 486 | + | 0.493827 | |
| STY4154 | putative DNA-binding protein | SubName: Full=Putative DNA-binding protein; | chromosome | CDS | 4013051 | 408 | - | 0.468137 | |
| STY4159 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4018925 | 441 | - | 0.519274 | |
| STY4164 | putative lacI-family transcriptional regulator | SubName: Full=Putative lacI-family transcriptional regulator; | chromosome | CDS | 4022959 | 1008 | - | 0.590278 | |
| STY4196 | hypothetical lysR-family transcriptional regulator | SubName: Full=Hypothetical lysR-family transcriptional regulator; | chromosome | CDS | 4061817 | 903 | - | 0.540421 | |
| STY4197 | hypothetical luxR-family transcriptional regulator | SubName: Full=Hypothetical luxR-family transcriptional regulator; | chromosome | CDS | 4063347 | 603 | + | 0.477612 | |
| STY4201 | gntR family regulatory protein | SubName: Full=GntR family regulatory protein; | chromosome | CDS | 4068168 | 720 | + | 0.4875 | |
| STY4247 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4111691 | 384 | - | 0.5625 | |
| STY4264 | putative ribokinase | SubName: Full=Putative ribokinase; | chromosome | CDS | 4128092 | 1215 | - | 0.417284 | |
| STY4265 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4129571 | 489 | - | 0.546012 | |
| STY4268 | gluconate utilization operon repressor | SubName: Full=Gluconate utilization operon repressor; | chromosome | CDS | 4132749 | 996 | + | 0.575301 | |
| STY4281 | MalT regulatory protein | RecName: Full=HTH-type transcriptional regulator MalT; AltName: Full=ATP-dependent transcriptional activator MalT; | chromosome | CDS | 4150971 | 2706 | - | 0.555063 | |
| STY4292 | putative transcription accessory protein | SubName: Full=Putative transcription accessory protein; | chromosome | CDS | 4167138 | 2331 | - | 0.58387 | |
| STY4404 | acetate operon repressor | SubName: Full=Acetate operon repressor; | chromosome | CDS | 4269601 | 825 | - | 0.579394 | |
| STY4412 | deoR family regulatory protein | SubName: Full=DeoR family regulatory protein; | chromosome | CDS | 4279074 | 759 | - | 0.450593 | |
| STY4433 | LexA repressor | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 4304371 | 609 | + | 0.545156 | |
| STY4468 | lysR family regulatory protein | SubName: Full=LysR family regulatory protein; | chromosome | CDS | 4354511 | 888 | - | 0.558559 | |
| STY4486 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4374136 | 465 | - | 0.490323 | |
| STY4494 | putative AraC family regulatory protein | SubName: Full=Putative AraC family regulatory protein; | chromosome | CDS | 4382756 | 762 | - | 0.43832 | |
| STY4514 | putative GerE family regulatory protein | SubName: Full=Putative GerE family regulatory protein; | chromosome | CDS | 4405069 | 288 | - | 0.295139 | |
| STY4515 | araC family regulatory protein | SubName: Full=AraC family regulatory protein; | chromosome | CDS | 4405353 | 876 | - | 0.355023 | |
| STY4518 | Putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4407323 | 492 | + | 0.567073 | |
| STY4584 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4460652 | 615 | + | 0.538211 | |
| STY4668 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4530511 | 489 | + | 0.591002 | |
| STY4681 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 4543264 | 576 | - | 0.513889 | |
| STY4779 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4640018 | 339 | + | 0.545723 | |
| STY4787 | putative BglB-family transcriptional antiterminator | SubName: Full=Putative BglB-family transcriptional antiterminator; | chromosome | CDS | 4645474 | 1974 | + | 0.539007 | |
| STY4801 | putative transcriptional regulator | RecName: Full=Arginine repressor; | chromosome | CDS | 4661211 | 489 | - | 0.474438 | |
| STY4812 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4671074 | 516 | - | 0.521318 | |
| STY4819 | regulatory protein | SubName: Full=Regulatory protein; | chromosome | CDS | 4680830 | 999 | - | 0.500501 | |
| STY4822 | protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 4685181 | 1077 | - | 0.363045 | |
| STY4823 | protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 4686254 | 1074 | - | 0.349162 | |
| STY4828 | phage DNA binding protein | SubName: Full=Phage DNA binding protein; | chromosome | CDS | 4690849 | 324 | + | 0.540123 | |
| STY4843 | putative gerE-family regulatory protein | SubName: Full=Putative GerE-family regulatory protein; SubName: Full=Putative gerE-family regulatory protein; | chromosome | CDS | 4702910 | 351 | + | 0.566952 | |
| STY4867 | probable transcriptional activator | SubName: Full=Probable transcriptional activator; | chromosome | CDS | 4729080 | 909 | - | 0.524752 | |
| STY4900 | conserved hypothetical regulatory protein | SubName: Full=Conserved hypothetical regulatory protein; | chromosome | CDS | 4762682 | 726 | + | 0.435262 | |
| STY4901 | conserved hypothetical regulatory protein | SubName: Full=Conserved hypothetical regulatory protein; | chromosome | CDS | 4763416 | 627 | + | 0.497608 | |
| STY4933 | right origin-binding protein | SubName: Full=Right origin-binding protein; | chromosome | CDS | 4794279 | 870 | - | 0.534483 | |
| STY4935 | putative two-component response regulator | SubName: Full=Putative two-component response regulator; | chromosome | CDS | 4795846 | 690 | + | 0.57971 | |
| aac | aminoglycoside 6'-N-acetyltransferase | SubName: Full=Aminoglycoside 6-N-acetyltransferase; | chromosome | CDS | 1397817 | 519 | - | 0.495183 | |
| acT | hypothetical transcriptional activator | SubName: Full=Hypothetical transcriptional activator; | chromosome | CDS | 939882 | 912 | + | 0.58114 | |
| allR | negative regulator of allantoin and glyoxylate utilization operons | RecName: Full=HTH-type transcriptional repressor AllR; AltName: Full=Negative regulator of allantoin and glyoxylate utilization operons; | chromosome | CDS | 569787 | 819 | + | 0.544567 | |
| arcA | global response regulator | SubName: Full=Global response regulator; | chromosome | CDS | 4806975 | 717 | - | 0.521618 | |
| argR | arginine repressor | RecName: Full=Arginine repressor; | chromosome | CDS | 3381626 | 471 | + | 0.498938 | |
| cI | repressor protein | SubName: Full=Repressor protein; | chromosome | CDS | 3516918 | 570 | - | 0.396491 | |
| cI | phage repressor protein cI | SubName: Full=Phage repressor protein cI; | chromosome | CDS | 4505609 | 633 | + | 0.43128 | |
| cII | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4537312 | 222 | + | 0.59009 | |
| citB | transcriptional regulatory protein citb | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 61103 | 687 | - | 0.484716 | |
| cobB | putative regulatory protein | RecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome | CDS | 1216368 | 714 | + | 0.536415 | |
| copR | response regulator | SubName: Full=Response regulator; | chromosome | CDS | 1094093 | 747 | - | 0.502008 | |
| cspA | cold shock protein | RecName: Full=Cold shock protein CspA; Short=CSP-A; AltName: Full=7.4 kDa cold shock protein; AltName: Full=CS7.4; | chromosome | CDS | 4012626 | 213 | - | 0.469484 | |
| cspB | cold shock protein | RecName: Full=Cold shock-like protein CspJ; | chromosome | CDS | 2042823 | 213 | - | 0.42723 | |
| cspD | cold shock-like protein CspD | SubName: Full=Cold shock-like protein CspD; | chromosome | CDS | 933501 | 222 | - | 0.518018 | |
| cspH | putative cold shock protein | RecName: Full=Cold shock-like protein CspH; | chromosome | CDS | 1782934 | 213 | + | 0.464789 | |
| cueR | copper efflux regulator | RecName: Full=HTH-type transcriptional regulator CueR; AltName: Full=Copper efflux regulator; AltName: Full=Copper export regulator; | chromosome | CDS | 553780 | 417 | + | 0.513189 | |
| dcuR | two-component response regulator | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4394294 | 720 | - | 0.490278 | |
| dpiA | transcriptional regulatory protein dpia; transcriptional regulator CriR | RecName: Full=Transcriptional regulatory protein; | chromosome | CDS | 674421 | 681 | + | 0.53304 | |
| ecnR | transcriptional regulatory protein | SubName: Full=Transcriptional regulatory protein; | chromosome | CDS | 4557150 | 588 | - | 0.462585 | |
| fimW | fimbriae w protein | SubName: Full=Fimbriae w protein; | chromosome | CDS | 604664 | 597 | - | 0.413735 | |
| fimZ | probable transcriptional regulator (FimXZ protein) | SubName: Full=Probable transcriptional regulator; SubName: Full=Probable transcriptional regulator (FimXZ protein); | chromosome | CDS | 602214 | 633 | - | 0.407583 | |
| fliA | RNA polymerase sigma transcription factor for flagellar operon | RecName: Full=RNA polymerase sigma factor FliA; AltName: Full=RNA polymerase sigma factor for flagellar operon; AltName: Full=Sigma F; AltName: Full=Sigma-28; | chromosome | CDS | 2008974 | 720 | - | 0.547222 | |
| glpR | glycerol-3-phosphate regulon repressor | SubName: Full=Glycerol-3-phosphate regulon repressor; | chromosome | CDS | 4150139 | 759 | + | 0.536232 | |
| greB | transcription elongation factor GreB | RecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; | chromosome | CDS | 4169567 | 474 | - | 0.516878 | |
| hpaA | 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein | SubName: Full=4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein; | chromosome | CDS | 1105511 | 897 | + | 0.513935 | |
| hpcR | homoprotocatechuate degradative operon repressor | SubName: Full=Homoprotocatechuate degradative operon repressor; | chromosome | CDS | 1097595 | 441 | - | 0.526077 | |
| hutC | histidine utilization repressor | SubName: Full=Histidine utilization repressor; | chromosome | CDS | 818643 | 726 | + | 0.566116 | |
| iagA | invasion protein regulator | RecName: Full=Transcriptional regulator HilA; Short=Protein IagA; | chromosome | CDS | 2871866 | 1662 | + | 0.430205 | |
| invF | possible AraC-family regulatory protein | RecName: Full=Invasion protein InvF; AltName: Full=Transcriptional regulator InvF; | chromosome | CDS | 2895282 | 651 | - | 0.460829 | |
| kdgR | probable global regulatory protein | SubName: Full=Probable global regulatory protein; | chromosome | CDS | 3114814 | 687 | - | 0.573508 | |
| kdgR | transcriptional regulator KdgR | SubName: Full=Transcriptional regulator KdgR; | chromosome | CDS | 1859271 | 792 | - | 0.496212 | |
| lysR | transcriptional activator protein LysR | SubName: Full=Transcriptional activator protein LysR; | chromosome | CDS | 3031031 | 936 | + | 0.586538 | |
| melR | melibiose operon regulatory protein | SubName: Full=Melibiose operon regulatory protein; | chromosome | CDS | 4386314 | 933 | - | 0.5209 | |
| merD | putative mercuric resistance operon coregulator | RecName: Full=HTH-type transcriptional regulator MerD; AltName: Full=Mercuric resistance protein MerD; | pHCM1 | CDS | 117909 | 366 | + | 0.672131 | |
| merD | putative mercuric resistance operon coregulator | SubName: Full=Putative mercuric resistance operon coregulator; | pHCM1 | CDS | 171595 | 363 | - | 0.69697 | |
| merR | putative mercuric resistance operon regulatory protein | RecName: Full=Mercuric resistance operon regulatory protein; | pHCM1 | CDS | 174890 | 435 | + | 0.595402 | |
| merR | putative mercuric resistance operon regulatory protein | SubName: Full=Putative mercuric resistance operon regulatory protein; | pHCM1 | CDS | 114531 | 456 | - | 0.607456 | |
| mucA | putative DNA-repair modulator | SubName: Full=Putative DNA-repair modulator; | pHCM1 | CDS | 185798 | 435 | + | 0.521839 | |
| nikR | nickel responsive regulator | RecName: Full=Nickel-responsive regulator; | chromosome | CDS | 4094257 | 402 | - | 0.547264 | |
| ompR | two-component response regulator OmpR | RecName: Full=Transcriptional regulatory protein OmpR; | chromosome | CDS | 4170266 | 720 | + | 0.565278 | |
| pduD | diol dehydratase medium subunit | SubName: Full=Diol dehydratase medium subunit; | chromosome | CDS | 2076210 | 675 | + | 0.568889 | |
| phnR | probable regulator of 2-aminoethylphosphonate uptake and metabolism operon | RecName: Full=Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons; | chromosome | CDS | 475558 | 720 | - | 0.591667 | |
| pmrA | two-component response regulator | SubName: Full=PmrA; SubName: Full=Two-component response regulator; | chromosome | CDS | 4378837 | 669 | - | 0.539611 | |
| pocR | pdu/cob regulatory protein PocR | SubName: Full=Pdu/cob regulatory protein PocR; | chromosome | CDS | 2070973 | 915 | - | 0.460109 | |
| prpR | propionate catabolism operon regulatory protein | SubName: Full=Propionate catabolism operon regulatory protein; | chromosome | CDS | 407663 | 1626 | - | 0.555351 | |
| ptsJ | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2509322 | 1293 | + | 0.589327 | |
| ramA | transcriptional activator RamA | SubName: Full=Transcriptional activator RamA; | chromosome | CDS | 623134 | 342 | + | 0.502924 | |
| relA | GTP pyrophosphokinase | SubName: Full=GTP pyrophosphokinase; | chromosome | CDS | 2958419 | 2235 | - | 0.5566 | |
| rhlB | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 3496937 | 1266 | + | 0.546604 | |
| rnr | ribonuclease R (RNase R) | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 4587425 | 2439 | + | 0.551455 | |
| rpoA | DNA-directed RNA polymerase alpha chain | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 4245212 | 990 | + | 0.522222 | |
| rpoH | RNA polymerase sigma-32 factor | RecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; | chromosome | CDS | 4109216 | 855 | + | 0.540351 | |
| rpoS | RNA polymerase sigma subunit RpoS (sigma-38) | RecName: Full=RNA polymerase sigma factor RpoS; AltName: Full=Sigma S; AltName: Full=Sigma-38; | chromosome | CDS | 2915077 | 993 | - | 0.523666 | |
| rpoZ | DNA-directed RNA polymerase omega chain | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 3914247 | 276 | - | 0.536232 | |
| rsD | putative regulatory protein | RecName: Full=Regulator of sigma D; | chromosome | CDS | 3569296 | 489 | + | 0.492843 | |
| sinR | LysR-family transcriptional regulator SinR | SubName: Full=LysR-family transcriptional regulator SinR; | chromosome | CDS | 348682 | 945 | + | 0.394709 | |
| sirA | invasion response-regulator | SubName: Full=Invasion response-regulator; | chromosome | CDS | 2002473 | 657 | - | 0.512938 | |
| slyA | transcriptional regulator | RecName: Full=Transcriptional regulator SlyA; | chromosome | CDS | 1606411 | 435 | - | 0.491954 | |
| sopD | possible secreted protein | SubName: Full=Possible secreted protein; | chromosome | CDS | 2935978 | 954 | + | 0.419287 | |
| soxR | SoxR protein | RecName: Full=Redox-sensitive transcriptional activator SoxR; | chromosome | CDS | 4349505 | 459 | + | 0.551198 | |
| soxS | regulatory protein SoxS | SubName: Full=Regulatory protein SoxS; | chromosome | CDS | 4349095 | 324 | - | 0.506173 | |
| spoT | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156 | SubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; SubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase CG Site No. 156; EC=3.1.7.2; | chromosome | CDS | 3912117 | 2112 | - | 0.536458 | |
| sprA | possible AraC-family transcriptional regulator | RecName: Full=Transcriptional regulator SirC; | chromosome | CDS | 2864110 | 888 | - | 0.363739 | |
| sprB | possible AraC-family transcriptional regulator | SubName: Full=Possible AraC-family transcriptional regulator; | chromosome | CDS | 2862970 | 756 | - | 0.451058 | |
| ssrB | putative two-component response regulator | SubName: Full=Putative two-component response regulator; | chromosome | CDS | 1649864 | 639 | + | 0.402191 | |
| tctD | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 2786824 | 675 | - | 0.548148 | |
| tetR | tetracycline repressor protein | SubName: Full=TetR; SubName: Full=Tetracycline repressor protein; | pHCM1 | CDS | 179219 | 627 | + | 0.401914 | |
| tinR | transcriptional regulator | SubName: Full=Transcriptional regulator; | chromosome | CDS | 357131 | 456 | + | 0.315789 | |
| treR | trehalose operon repressor | SubName: Full=Trehalose operon repressor; | chromosome | CDS | 4654435 | 948 | - | 0.549578 | |
| trpR | probable trp operon repressor | RecName: Full=Trp operon repressor; | chromosome | CDS | 4792824 | 327 | + | 0.550459 | |
| uxuR | uxu operon transcriptional regulator | SubName: Full=Uxu operon transcriptional regulator; | chromosome | CDS | 4725066 | 774 | + | 0.549096 | |
| yafC | hypothetical transcriptional regulator | SubName: Full=Hypothetical transcriptional regulator; | chromosome | CDS | 293718 | 915 | - | 0.507104 | |
| ybaO | hypothetical transcriptional regulator | SubName: Full=Hypothetical transcriptional regulator; | chromosome | CDS | 509127 | 459 | + | 0.522876 | |
| ybdO | putative lysR-family transcriptional regulator | SubName: Full=Putative LysR-family transcriptional regulator; SubName: Full=Putative lysR-family transcriptional regulator; | chromosome | CDS | 652161 | 903 | - | 0.389812 | |
| yfhH | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 2681675 | 849 | + | 0.570082 | |
| yjaB | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4262945 | 438 | - | 0.488584 | |
| yjeB | conserved hypothetical protein | RecName: Full=HTH-type transcriptional repressor NsrR; | chromosome | CDS | 4586962 | 426 | + | 0.485915 | |
| yjfQ | probable transcriptional regulator | RecName: Full=HTH-type transcriptional regulator UlaR; | chromosome | CDS | 4598488 | 756 | - | 0.541005 | |
| ytfH | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4617488 | 387 | + | 0.565891 | |
| zntR | putative Zn(II)-responsive regulator | SubName: Full=Putative Zn(II)-responsive regulator; | chromosome | CDS | 4247111 | 426 | + | 0.488263 | |
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