Gene list
Applied filters:
COG category: Transcription
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
Number of genes found: 342
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
HCM1.207c | hypothetical protein | pHCM1 | CDS | 155387 | 378 | - | 0.484127 | |
HCM1.244c | putative transcriptional regulator | pHCM1 | CDS | 179823 | 687 | - | 0.417758 | |
HCM1.248 | putative transcriptional regulator (partial) | pHCM1 | CDS | 183095 | 126 | + | 0.420635 | |
HCM1.58c | putative DNA-binding protein | pHCM1 | CDS | 36134 | 1158 | - | 0.495682 | |
HCM1.63c | hypothetical protein | pHCM1 | CDS | 40516 | 1077 | - | 0.389972 | |
HCM1.87 | putative plasmid partition protein | pHCM1 | CDS | 57992 | 1008 | + | 0.39881 | |
HCM2.0045c | hypothetical protein | pHCM2 | CDS | 34153 | 360 | - | 0.525 | |
HCM2.0076c | hypothetical protein | pHCM2 | CDS | 64553 | 669 | - | 0.559043 | |
HCM2.0077c | hypothetical protein | pHCM2 | CDS | 65221 | 699 | - | 0.532189 | |
HCM2.0078 | putative helicase | pHCM2 | CDS | 65984 | 1560 | + | 0.514744 | |
HCM2.0100c | hypothetical protein | pHCM2 | CDS | 79214 | 642 | - | 0.538941 | |
HCM2.0129c | hypothetical protein | pHCM2 | CDS | 102799 | 495 | - | 0.519192 | |
STY0014 | putative regulatory protein | chromosome | CDS | 15020 | 948 | + | 0.410338 | |
STY0017 | putative membrane protein | chromosome | CDS | 17049 | 444 | - | 0.382883 | |
STY0035 | putative membrane protein | chromosome | CDS | 32549 | 450 | - | 0.368889 | |
STY0036 | putative transcriptional regulator (lysR family) | chromosome | CDS | 33368 | 996 | + | 0.384538 | |
STY0038 | putative transcriptional regulator | chromosome | CDS | 34511 | 306 | - | 0.382353 | |
STY0048 | transcriptional activator protein NhaR | chromosome | CDS | 47414 | 900 | + | 0.506667 | |
STY0111 | probable ATP-dependent helicase HepA | chromosome | CDS | 109800 | 2907 | - | 0.570347 | |
STY0121 | arabinose operon regulatory protein | chromosome | CDS | 123055 | 846 | + | 0.536643 | |
STY0134 | probable activator protein in leuABCD operon | chromosome | CDS | 135983 | 945 | + | 0.48254 | |
STY0138 | fructose repressor | chromosome | CDS | 139751 | 1005 | + | 0.564179 | |
STY0159 | putative lysR-family transcriptional regulator | chromosome | CDS | 164472 | 942 | + | 0.516985 | |
STY0174 | pyruvate dehydrogenase complex repressor | chromosome | CDS | 178463 | 765 | + | 0.568627 | |
STY0186 | putative transcriptional regulator | chromosome | CDS | 195592 | 768 | + | 0.548177 | |
STY0232 | conserved hypothetical protein | chromosome | CDS | 243080 | 1158 | + | 0.544905 | |
STY0262 | ROF protein | chromosome | CDS | 277638 | 255 | - | 0.443137 | |
STY0377 | possible transmembrane regulator | chromosome | CDS | 388659 | 744 | + | 0.395161 | |
STY0381 | possible transcriptionl regulator | chromosome | CDS | 391048 | 528 | + | 0.407197 | |
STY0395 | AraC-family transcriptional regulator | chromosome | CDS | 403089 | 1005 | + | 0.58209 | |
STY0426 | hypothetical ROK-family protein | chromosome | CDS | 435467 | 909 | + | 0.577558 | |
STY0432 | phosphate regulon transcriptional regulatory protein PhoB | chromosome | CDS | 442289 | 690 | + | 0.547826 | |
STY0448 | putative deoR-family transcriptional regulator | chromosome | CDS | 457903 | 693 | + | 0.522367 | |
STY0457 | N utilization substance protein B | chromosome | CDS | 463736 | 420 | + | 0.52619 | |
STY0478 | hypothetical protein | chromosome | CDS | 483689 | 285 | + | 0.410526 | |
STY0521 | potential acrAB operon repressor | chromosome | CDS | 526616 | 654 | + | 0.46789 | |
STY0562 | hypothetical lysR-family transcriptional regulator | chromosome | CDS | 568074 | 927 | - | 0.531823 | |
STY0611 | hypothetical araC-family transcriptional regulator | chromosome | CDS | 610886 | 855 | - | 0.587134 | |
STY0622 | putative tetR-family transcriptional regulator | chromosome | CDS | 622264 | 582 | - | 0.525773 | |
STY0648 | conserved hypothetical protein | chromosome | CDS | 650170 | 618 | - | 0.504854 | |
STY0664 | regulator of nucleoside diphosphate kinase | chromosome | CDS | 664173 | 411 | - | 0.583942 | |
STY0678 | cold shock-like protein cspE | chromosome | CDS | 677679 | 210 | + | 0.438095 | |
STY0684 | lysR-family transcriptional regulator | chromosome | CDS | 680796 | 954 | - | 0.506289 | |
STY0703 | putative sigma-54 dependent transcriptional regulator | chromosome | CDS | 699294 | 1929 | + | 0.498186 | |
STY0720 | N-acetylglucosamine repressor | chromosome | CDS | 717672 | 1221 | - | 0.535627 | |
STY0730 | lysR-family transcriptional regulator | chromosome | CDS | 731339 | 927 | - | 0.563107 | |
STY0743 | KDP operon transcriptional regulatory protein | chromosome | CDS | 742195 | 678 | - | 0.564897 | |
STY0854 | hypothetical tetR-family transcriptional regulator | chromosome | CDS | 848481 | 675 | - | 0.52 | |
STY0855 | putative ATP-dependent RNA helicase rhlE | chromosome | CDS | 849385 | 1368 | + | 0.584795 | |
STY0876 | transcriptional regulator (iron dependant repressor family) | chromosome | CDS | 866783 | 474 | + | 0.523207 | |
STY0897 | deoxyribose operon repressor | chromosome | CDS | 891157 | 759 | - | 0.517787 | |
STY0957 | leucine-responsive regulatory protein | chromosome | CDS | 947280 | 495 | + | 0.488889 | |
STY1005 | putative transcriptional regulator | chromosome | CDS | 1003596 | 462 | - | 0.484848 | |
STY1020 | putative DNA-binding protein | chromosome | CDS | 1014982 | 405 | - | 0.45679 | |
STY1024 | putative DNA-binding protein | chromosome | CDS | 1017923 | 348 | + | 0.545977 | |
STY1094 | conserved hypothetical protein | chromosome | CDS | 1072136 | 606 | + | 0.5 | |
STY1106 | putative transcriptional regulator (pseudogene) | chromosome | CDS | 1081781 | 1491 | + | 0.503689 | |
STY1157 | putative transcriptional regulator | chromosome | CDS | 1116598 | 639 | + | 0.543036 | |
STY1163 | putative transcriptional regulator | chromosome | CDS | 1125366 | 882 | - | 0.495465 | |
STY1179 | putative regulatory protein | chromosome | CDS | 1140027 | 627 | - | 0.403509 | |
STY1211 | negative regulator of flagellin synthesis (anti-sigma factor) | chromosome | CDS | 1167321 | 294 | - | 0.510204 | |
STY1253 | putative TetR-family regulatory protein | chromosome | CDS | 1206213 | 636 | - | 0.537736 | |
STY1256 | transcription-repair coupling factor (TrcF) | chromosome | CDS | 1208383 | 3447 | - | 0.56832 | |
STY1260 | putative ROK-family protein | chromosome | CDS | 1215333 | 909 | + | 0.565457 | |
STY1271 | transcriptional regulatory protein PhoP, regulator of virulence determinants | chromosome | CDS | 1228174 | 675 | - | 0.512593 | |
STY1285 | nitrate/nitrite response regulator protein NarL | chromosome | CDS | 1239520 | 651 | - | 0.533026 | |
STY1337 | cys regulon transcriptional activator | chromosome | CDS | 1296327 | 975 | + | 0.518974 | |
STY1347 | putative regulatory protein | chromosome | CDS | 1306046 | 753 | - | 0.498008 | |
STY1350 | exoribonuclease II | chromosome | CDS | 1309430 | 1935 | - | 0.557106 | |
STY1370 | psp operon transcriptional activator PspF | chromosome | CDS | 1326223 | 981 | - | 0.545362 | |
STY1371 | phage shock protein A | chromosome | CDS | 1327374 | 669 | + | 0.512706 | |
STY1373 | phage shock protein C | chromosome | CDS | 1328326 | 360 | + | 0.522222 | |
STY1378 | transcriptional regulatory protein TyrR | chromosome | CDS | 1332068 | 1542 | + | 0.53048 | |
STY1386 | putative transcriptional regulator | chromosome | CDS | 1339652 | 906 | + | 0.545254 | |
STY1390 | putative transcriptional regulator | chromosome | CDS | 1342585 | 591 | + | 0.57022 | |
STY1393 | putative transcriptional regulator | chromosome | CDS | 1345254 | 852 | - | 0.38615 | |
STY1400 | conserved hypothetical DNA-binding protein | chromosome | CDS | 1352022 | 603 | + | 0.505804 | |
STY1446 | putative regulatory protein | chromosome | CDS | 1398335 | 792 | - | 0.516414 | |
STY1459 | putative DNA-binding protein | chromosome | CDS | 1409479 | 537 | + | 0.528864 | |
STY1466 | putative regulatory protein | chromosome | CDS | 1415872 | 1425 | + | 0.527719 | |
STY1477 | putative regulatory protein | chromosome | CDS | 1428801 | 666 | + | 0.46997 | |
STY1490 | putative regulatory protein | chromosome | CDS | 1446547 | 579 | - | 0.57513 | |
STY1514 | putative regulatory protein | chromosome | CDS | 1470680 | 489 | - | 0.474438 | |
STY1521 | putative regulatory protein | chromosome | CDS | 1477754 | 792 | - | 0.467172 | |
STY1537 | putative regulatory protein | chromosome | CDS | 1491328 | 873 | + | 0.56701 | |
STY1540 | multiple antibiotic resistance protein MarR | chromosome | CDS | 1494534 | 378 | + | 0.489418 | |
STY1541 | multiple antibiotic resistance protein MarA | chromosome | CDS | 1494880 | 435 | + | 0.455172 | |
STY1551 | putative regulatory protein | chromosome | CDS | 1503716 | 687 | + | 0.508006 | |
STY1576 | putative regulatory protein | chromosome | CDS | 1525912 | 1161 | - | 0.515935 | |
STY1578 | putative regulatory protein | chromosome | CDS | 1527260 | 900 | - | 0.564444 | |
STY1647 | putative two-component response regulator | chromosome | CDS | 1575105 | 732 | + | 0.530055 | |
STY1685 | putative TetR-family transcriptional regulator | chromosome | CDS | 1612050 | 600 | + | 0.551667 | |
STY1692 | purine nucleotide synthesis repressor | chromosome | CDS | 1617786 | 1026 | + | 0.542885 | |
STY1693 | putative transcriptional regulator | chromosome | CDS | 1618808 | 933 | - | 0.564845 | |
STY1730 | putative transcriptional regulator | chromosome | CDS | 1650681 | 729 | + | 0.539095 | |
STY1798 | putative cel operon repressor | chromosome | CDS | 1718435 | 843 | - | 0.431791 | |
STY1839 | putative transcriptional regulator | chromosome | CDS | 1756268 | 795 | - | 0.549686 | |
STY1855 | putative transcriptional regulator | chromosome | CDS | 1764926 | 849 | - | 0.462898 | |
STY1856 | putative regulatory protein | chromosome | CDS | 1765843 | 594 | - | 0.367003 | |
STY1934 | fatty acid-fatty acyl responsive DNA-binding protein | chromosome | CDS | 1827491 | 720 | - | 0.522222 | |
STY1951 | putative ATP-dependent helicase | chromosome | CDS | 1840118 | 1911 | - | 0.561486 | |
STY1967 | cold shock-like protein CspC | chromosome | CDS | 1857152 | 210 | - | 0.471429 | |
STY1991 | putative acetyltransferase | chromosome | CDS | 1876603 | 420 | - | 0.42381 | |
STY2061 | conserved hypothetical protein | chromosome | CDS | 1921742 | 813 | - | 0.501845 | |
STY2065 | putative cro repressor | chromosome | CDS | 1924564 | 243 | - | 0.444444 | |
STY2066 | putative regulator | chromosome | CDS | 1924903 | 420 | + | 0.430952 | |
STY2095 | putative hex-regulon repressor | chromosome | CDS | 1947124 | 870 | + | 0.511494 | |
STY2158 | cell-division regulatory protein | chromosome | CDS | 2003884 | 723 | - | 0.489627 | |
STY2190 | colanic acid capsullar biosynthesis activation protein A | chromosome | CDS | 2031045 | 624 | + | 0.386218 | |
STY2206 | UmuD protein | chromosome | CDS | 2044752 | 420 | - | 0.5 | |
STY2278 | putative transcriptional regulator | chromosome | CDS | 2104261 | 915 | - | 0.527869 | |
STY2344 | putative two-component system response regulator | chromosome | CDS | 2182500 | 723 | + | 0.532503 | |
STY2374 | putative gntR-family transcriptional regulator | chromosome | CDS | 2205062 | 747 | - | 0.534137 | |
STY2388 | putative two-component system response regulator | chromosome | CDS | 2219326 | 720 | - | 0.505556 | |
STY2390 | putative transcriptional regulator | chromosome | CDS | 2221950 | 732 | + | 0.540984 | |
STY2410 | putative transcriptional regulator | chromosome | CDS | 2242465 | 909 | + | 0.546755 | |
STY2425 | mgl repressor and galactose ultrainduction factor | chromosome | CDS | 2254472 | 1023 | - | 0.557185 | |
STY2429 | putative DNA-binding protein | chromosome | CDS | 2258645 | 390 | - | 0.523077 | |
STY2436 | putative transcriptional regulator | chromosome | CDS | 2266905 | 864 | - | 0.549769 | |
STY2460 | putative helicase | chromosome | CDS | 2290935 | 1761 | + | 0.569563 | |
STY2472 | nitrate/nitrite response regulator protein NarP | chromosome | CDS | 2303653 | 648 | + | 0.524691 | |
STY2495 | regulator of capsule synthesis B component | chromosome | CDS | 2326944 | 651 | + | 0.493088 | |
STY2510 | putative transcriptional regulator | chromosome | CDS | 2344196 | 879 | + | 0.47554 | |
STY2522 | putative transcriptional regulator | chromosome | CDS | 2357030 | 783 | - | 0.508301 | |
STY2560 | NADH dehydrogenase operon transcriptional regulator | chromosome | CDS | 2395148 | 939 | - | 0.521832 | |
STY2575 | putative transcriptional regulator | chromosome | CDS | 2412405 | 1020 | + | 0.554902 | |
STY2591 | putative transcriptional regulator | chromosome | CDS | 2427893 | 1428 | + | 0.521709 | |
STY2605 | putative DNA-binding protein | chromosome | CDS | 2441517 | 249 | + | 0.493976 | |
STY2655 | xanthosine operon transcriptional regulator | chromosome | CDS | 2493002 | 885 | - | 0.502825 | |
STY2660 | putative transcriptional regulator | chromosome | CDS | 2497378 | 927 | - | 0.568501 | |
STY2691 | ethanolamine operon transcriptional regulator | chromosome | CDS | 2524275 | 1053 | - | 0.545109 | |
STY2790 | conserved hypothetical protein | chromosome | CDS | 2646961 | 495 | - | 0.553535 | |
STY2800 | stationary phase inducible protein CsiE | chromosome | CDS | 2655185 | 1278 | + | 0.547731 | |
STY2804 | transcriptional activator cadC | chromosome | CDS | 2660730 | 1545 | + | 0.476375 | |
STY2821 | putative transcriptional regulator | chromosome | CDS | 2684813 | 912 | + | 0.432018 | |
STY2827 | ribonuclease III | chromosome | CDS | 2688914 | 681 | - | 0.528634 | |
STY2833 | RNA polymerase sigma-E factor (sigma-24) | chromosome | CDS | 2695031 | 576 | - | 0.512153 | |
STY2836 | ATP-dependent RNA helicase SrmB | chromosome | CDS | 2698505 | 1335 | + | 0.548315 | |
STY2914 | putative transcriptional regulator | chromosome | CDS | 2797347 | 678 | + | 0.564897 | |
STY2917 | putative transcriptional regulator | chromosome | CDS | 2798936 | 300 | + | 0.51 | |
STY2939 | putative transcriptional regulator | chromosome | CDS | 2814016 | 531 | + | 0.487759 | |
STY2957 | glucitol operon activator protein | chromosome | CDS | 2833969 | 360 | + | 0.541667 | |
STY2959 | glucitol operon repressor | chromosome | CDS | 2834527 | 774 | + | 0.498708 | |
STY2961 | putative sigma-54-dependent transriptional regulator | chromosome | CDS | 2836255 | 1521 | - | 0.594346 | |
STY2977 | hydrogenase isoenzymes formation protein HypB | chromosome | CDS | 2853114 | 873 | + | 0.578465 | |
STY2996 | AraC-family transcriptional regulator | chromosome | CDS | 2869850 | 930 | + | 0.403226 | |
STY3027 | hypothetical protein | chromosome | CDS | 2897992 | 528 | + | 0.471591 | |
STY3037 | possible LysR-family transcriptional regulator | chromosome | CDS | 2905042 | 933 | + | 0.550911 | |
STY3044 | DeoR-family trancriptional regulator | chromosome | CDS | 2911407 | 765 | + | 0.559477 | |
STY3045 | putative regulatory protein | chromosome | CDS | 2912190 | 405 | - | 0.530864 | |
STY3093 | hypothetical protein | chromosome | CDS | 2957978 | 357 | - | 0.456583 | |
STY3119 | l-fucose operon activator | chromosome | CDS | 2987534 | 711 | + | 0.499297 | |
STY3122 | regulatory protein for glycine cleavage pathway | chromosome | CDS | 2989810 | 918 | - | 0.503268 | |
STY3155 | galactose operon repressor | chromosome | CDS | 3027580 | 1029 | + | 0.560739 | |
STY3156 | possible regulatory protein | chromosome | CDS | 3028619 | 1023 | + | 0.568915 | |
STY3165 | possible regulatory protein | chromosome | CDS | 3037910 | 864 | - | 0.550926 | |
STY3220 | chromosome intitiation inhibitor | chromosome | CDS | 3088114 | 894 | + | 0.577181 | |
STY3249 | conserved hypothetical protein | chromosome | CDS | 3113788 | 564 | + | 0.52305 | |
STY3293 | LysR-family transcriptional regulator | chromosome | CDS | 3139940 | 684 | + | 0.440058 | |
STY3335 | probable AraC-family trancriptional regulatory protein | chromosome | CDS | 3178727 | 921 | - | 0.511401 | |
STY3352 | possible AraC-family transcriptional regulator | chromosome | CDS | 3196819 | 867 | - | 0.576701 | |
STY3354 | probable two-component system response regulator. | chromosome | CDS | 3198301 | 660 | + | 0.554545 | |
STY3390 | RNA polymerase sigma-70 factor | chromosome | CDS | 3233766 | 1983 | + | 0.528492 | |
STY3415 | possible LysR-family transcriptional regulator | chromosome | CDS | 3257518 | 897 | - | 0.567447 | |
STY3428 | TDC operon transcriptional activator | chromosome | CDS | 3269977 | 939 | - | 0.447284 | |
STY3445 | galactitol utilization operon repressor | chromosome | CDS | 3288627 | 774 | + | 0.505168 | |
STY3461 | ATP-dependent RNA helicase (dead-box protein) | chromosome | CDS | 3301996 | 1941 | - | 0.573931 | |
STY3468 | L factor | chromosome | CDS | 3312124 | 1503 | - | 0.525615 | |
STY3477 | transcription elongation factor | chromosome | CDS | 3322453 | 477 | - | 0.509434 | |
STY3485 | Ner-like regulatory protein | chromosome | CDS | 3329075 | 288 | + | 0.503472 | |
STY3487 | conserved hypothetical protein | chromosome | CDS | 3330734 | 294 | - | 0.496599 | |
STY3499 | RNA polymerase sigma-54 factor (sigma-N) | chromosome | CDS | 3338936 | 1434 | + | 0.540446 | |
STY3516 | possible kinase | chromosome | CDS | 3359426 | 876 | - | 0.593607 | |
STY3521 | putative GntR-family transcriptional regulator | chromosome | CDS | 3363658 | 792 | - | 0.525253 | |
STY3537 | possible transcriptional regulator | chromosome | CDS | 3378873 | 606 | - | 0.49505 | |
STY3538 | possible GntR-family transcriptional regulator | chromosome | CDS | 3379525 | 630 | - | 0.493651 | |
STY3547 | probable LysR-family transcriptional regulator | chromosome | CDS | 3386896 | 930 | + | 0.535484 | |
STY3565 | Fis DNA-binding protein | chromosome | CDS | 3409864 | 297 | + | 0.464646 | |
STY3582 | transcriptional activator | chromosome | CDS | 3436091 | 489 | + | 0.490798 | |
STY3595 | trans-activator of metE and metH | chromosome | CDS | 3449980 | 954 | + | 0.584906 | |
STY3638 | transcription termination factor | chromosome | CDS | 3494786 | 1260 | - | 0.529365 | |
STY3649 | LysR-family regulatory protein for ilvC expression | chromosome | CDS | 3506373 | 888 | + | 0.585586 | |
STY3708 | possible LysR-family transcriptional regulatory protein | chromosome | CDS | 3551580 | 837 | + | 0.514934 | |
STY3731 | DNA-directed RNA polymerase, beta'-subunit | chromosome | CDS | 3576977 | 4224 | - | 0.546165 | |
STY3732 | DNA-directed RNA polymerase, beta-subunit | chromosome | CDS | 3581277 | 4029 | - | 0.541822 | |
STY3737 | transcription antitermination protein | chromosome | CDS | 3588262 | 546 | - | 0.545788 | |
STY3747 | possible TetR-family trancriptional regulatory protein | chromosome | CDS | 3604987 | 636 | - | 0.553459 | |
STY3749 | hydrogen peroxide-inducible regulon activator | chromosome | CDS | 3607204 | 918 | - | 0.56427 | |
STY3756 | putative AraC-family transcriptional regulator | chromosome | CDS | 3618043 | 837 | + | 0.561529 | |
STY3762 | putative GntR-family regulatory protein | chromosome | CDS | 3624532 | 1482 | + | 0.602564 | |
STY3770 | repressor of the methionine regulon | chromosome | CDS | 3635967 | 318 | + | 0.518868 | |
STY3776 | transcriptional repressor | chromosome | CDS | 3642207 | 1026 | + | 0.534113 | |
STY3797 | putative regulatory protein | chromosome | CDS | 3662183 | 960 | + | 0.503125 | |
STY3802 | putative GntR-family regulatory protein | chromosome | CDS | 3665690 | 723 | - | 0.50899 | |
STY3812 | two-component response regulatory protein | chromosome | CDS | 3674986 | 699 | + | 0.546495 | |
STY3824 | L-rhamnose operon transcriptional activator | chromosome | CDS | 3684525 | 849 | - | 0.499411 | |
STY3825 | L-rhamnose operon regulatory protein | chromosome | CDS | 3685526 | 837 | - | 0.53644 | |
STY3832 | putative DNA-binding protein | chromosome | CDS | 3691934 | 567 | - | 0.589065 | |
STY3845 | putative CopG-family DNA-binding protein | chromosome | CDS | 3703463 | 249 | - | 0.48996 | |
STY3848 | conserved hypothetical protein | chromosome | CDS | 3705233 | 447 | + | 0.474273 | |
STY3849 | putative acetyltransferase | chromosome | CDS | 3705694 | 990 | - | 0.547475 | |
STY3853 | putative DeoR-family transcriptional regulator | chromosome | CDS | 3708770 | 804 | - | 0.542289 | |
STY3888 | hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region; putative GntR-family transcriptional regulator | chromosome | CDS | 3749553 | 705 | + | 0.507801 | |
STY3891 | ribose operon repressor | chromosome | CDS | 3751662 | 999 | - | 0.527528 | |
STY3902 | regulatory protein | chromosome | CDS | 3764066 | 459 | + | 0.498911 | |
STY3935 | putative LysR-family transcriptional regulator | chromosome | CDS | 3798276 | 903 | - | 0.54928 | |
STY3944 | putative LysR-family transcriptioanl regulator | chromosome | CDS | 3811353 | 909 | - | 0.542354 | |
STY3979 | D-serine deaminase activator | chromosome | CDS | 3845856 | 924 | + | 0.528139 | |
STY3988 | putative DeoR-family transcriptional regulator | chromosome | CDS | 3853107 | 786 | - | 0.519084 | |
STY3992 | Two-component system response regulator protein | chromosome | CDS | 3857652 | 591 | + | 0.590525 | |
STY3997 | putative GntR-family transcriptional regulator | chromosome | CDS | 3863614 | 744 | + | 0.409946 | |
STY4005 | putative DNA-binding protein | chromosome | CDS | 3869336 | 324 | - | 0.481481 | |
STY4048 | ATP-dependent DNA helicase | chromosome | CDS | 3909336 | 2082 | - | 0.582133 | |
STY4058 | putative regulatory protein | chromosome | CDS | 3918961 | 903 | + | 0.535991 | |
STY4062 | putative TetR-family transcriptional regulator | chromosome | CDS | 3922416 | 597 | - | 0.517588 | |
STY4100 | putative lacI family transcriptional regulator regulator | chromosome | CDS | 3957949 | 1056 | + | 0.546402 | |
STY4103 | putative L-lactate dehydrogenase operon regulator | chromosome | CDS | 3960797 | 777 | - | 0.579151 | |
STY4109 | mannitol operon repressor (mannitol repressor protein) | chromosome | CDS | 3968959 | 591 | - | 0.534687 | |
STY4115 | putative sugar kinase | chromosome | CDS | 3977536 | 882 | - | 0.566893 | |
STY4118 | putative transcriptional regulator | chromosome | CDS | 3982461 | 813 | + | 0.546125 | |
STY4131 | putative transcriptional regulator | chromosome | CDS | 3993461 | 801 | + | 0.523096 | |
STY4136 | xylose operon regulatory protein | chromosome | CDS | 3999540 | 1179 | - | 0.53011 | |
STY4148 | putative acetyltransferase | chromosome | CDS | 4010135 | 468 | + | 0.41453 | |
STY4151 | putative acetyltransferase | chromosome | CDS | 4011055 | 486 | + | 0.493827 | |
STY4154 | putative DNA-binding protein | chromosome | CDS | 4013051 | 408 | - | 0.468137 | |
STY4159 | putative acetyltransferase | chromosome | CDS | 4018925 | 441 | - | 0.519274 | |
STY4164 | putative lacI-family transcriptional regulator | chromosome | CDS | 4022959 | 1008 | - | 0.590278 | |
STY4196 | hypothetical lysR-family transcriptional regulator | chromosome | CDS | 4061817 | 903 | - | 0.540421 | |
STY4197 | hypothetical luxR-family transcriptional regulator | chromosome | CDS | 4063347 | 603 | + | 0.477612 | |
STY4201 | gntR family regulatory protein | chromosome | CDS | 4068168 | 720 | + | 0.4875 | |
STY4247 | conserved hypothetical protein | chromosome | CDS | 4111691 | 384 | - | 0.5625 | |
STY4264 | putative ribokinase | chromosome | CDS | 4128092 | 1215 | - | 0.417284 | |
STY4265 | putative acetyltransferase | chromosome | CDS | 4129571 | 489 | - | 0.546012 | |
STY4268 | gluconate utilization operon repressor | chromosome | CDS | 4132749 | 996 | + | 0.575301 | |
STY4281 | MalT regulatory protein | chromosome | CDS | 4150971 | 2706 | - | 0.555063 | |
STY4292 | putative transcription accessory protein | chromosome | CDS | 4167138 | 2331 | - | 0.58387 | |
STY4404 | acetate operon repressor | chromosome | CDS | 4269601 | 825 | - | 0.579394 | |
STY4412 | deoR family regulatory protein | chromosome | CDS | 4279074 | 759 | - | 0.450593 | |
STY4433 | LexA repressor | chromosome | CDS | 4304371 | 609 | + | 0.545156 | |
STY4468 | lysR family regulatory protein | chromosome | CDS | 4354511 | 888 | - | 0.558559 | |
STY4486 | putative acetyltransferase | chromosome | CDS | 4374136 | 465 | - | 0.490323 | |
STY4494 | putative AraC family regulatory protein | chromosome | CDS | 4382756 | 762 | - | 0.43832 | |
STY4514 | putative GerE family regulatory protein | chromosome | CDS | 4405069 | 288 | - | 0.295139 | |
STY4515 | araC family regulatory protein | chromosome | CDS | 4405353 | 876 | - | 0.355023 | |
STY4518 | Putative acetyltransferase | chromosome | CDS | 4407323 | 492 | + | 0.567073 | |
STY4584 | conserved hypothetical protein | chromosome | CDS | 4460652 | 615 | + | 0.538211 | |
STY4668 | conserved hypothetical protein | chromosome | CDS | 4530511 | 489 | + | 0.591002 | |
STY4681 | putative transcriptional regulator | chromosome | CDS | 4543264 | 576 | - | 0.513889 | |
STY4779 | hypothetical protein | chromosome | CDS | 4640018 | 339 | + | 0.545723 | |
STY4787 | putative BglB-family transcriptional antiterminator | chromosome | CDS | 4645474 | 1974 | + | 0.539007 | |
STY4801 | putative transcriptional regulator | chromosome | CDS | 4661211 | 489 | - | 0.474438 | |
STY4812 | putative acetyltransferase | chromosome | CDS | 4671074 | 516 | - | 0.521318 | |
STY4819 | regulatory protein | chromosome | CDS | 4680830 | 999 | - | 0.500501 | |
STY4822 | protein kinase | chromosome | CDS | 4685181 | 1077 | - | 0.363045 | |
STY4823 | protein kinase | chromosome | CDS | 4686254 | 1074 | - | 0.349162 | |
STY4828 | phage DNA binding protein | chromosome | CDS | 4690849 | 324 | + | 0.540123 | |
STY4843 | putative gerE-family regulatory protein | chromosome | CDS | 4702910 | 351 | + | 0.566952 | |
STY4867 | probable transcriptional activator | chromosome | CDS | 4729080 | 909 | - | 0.524752 | |
STY4900 | conserved hypothetical regulatory protein | chromosome | CDS | 4762682 | 726 | + | 0.435262 | |
STY4901 | conserved hypothetical regulatory protein | chromosome | CDS | 4763416 | 627 | + | 0.497608 | |
STY4933 | right origin-binding protein | chromosome | CDS | 4794279 | 870 | - | 0.534483 | |
STY4935 | putative two-component response regulator | chromosome | CDS | 4795846 | 690 | + | 0.57971 | |
aac | aminoglycoside 6'-N-acetyltransferase | chromosome | CDS | 1397817 | 519 | - | 0.495183 | |
acT | hypothetical transcriptional activator | chromosome | CDS | 939882 | 912 | + | 0.58114 | |
allR | negative regulator of allantoin and glyoxylate utilization operons | chromosome | CDS | 569787 | 819 | + | 0.544567 | |
arcA | global response regulator | chromosome | CDS | 4806975 | 717 | - | 0.521618 | |
argR | arginine repressor | chromosome | CDS | 3381626 | 471 | + | 0.498938 | |
cI | phage repressor protein cI | chromosome | CDS | 4505609 | 633 | + | 0.43128 | |
cI | repressor protein | chromosome | CDS | 3516918 | 570 | - | 0.396491 | |
cII | transcriptional regulatory protein | chromosome | CDS | 4537312 | 222 | + | 0.59009 | |
citB | transcriptional regulatory protein citb | chromosome | CDS | 61103 | 687 | - | 0.484716 | |
cobB | putative regulatory protein | chromosome | CDS | 1216368 | 714 | + | 0.536415 | |
copR | response regulator | chromosome | CDS | 1094093 | 747 | - | 0.502008 | |
cspA | cold shock protein | chromosome | CDS | 4012626 | 213 | - | 0.469484 | |
cspB | cold shock protein | chromosome | CDS | 2042823 | 213 | - | 0.42723 | |
cspD | cold shock-like protein CspD | chromosome | CDS | 933501 | 222 | - | 0.518018 | |
cspH | putative cold shock protein | chromosome | CDS | 1782934 | 213 | + | 0.464789 | |
cueR | copper efflux regulator | chromosome | CDS | 553780 | 417 | + | 0.513189 | |
dcuR | two-component response regulator | chromosome | CDS | 4394294 | 720 | - | 0.490278 | |
dpiA | transcriptional regulatory protein dpia; transcriptional regulator CriR | chromosome | CDS | 674421 | 681 | + | 0.53304 | |
ecnR | transcriptional regulatory protein | chromosome | CDS | 4557150 | 588 | - | 0.462585 | |
fimW | fimbriae w protein | chromosome | CDS | 604664 | 597 | - | 0.413735 | |
fimZ | probable transcriptional regulator (FimXZ protein) | chromosome | CDS | 602214 | 633 | - | 0.407583 | |
fliA | RNA polymerase sigma transcription factor for flagellar operon | chromosome | CDS | 2008974 | 720 | - | 0.547222 | |
glpR | glycerol-3-phosphate regulon repressor | chromosome | CDS | 4150139 | 759 | + | 0.536232 | |
greB | transcription elongation factor GreB | chromosome | CDS | 4169567 | 474 | - | 0.516878 | |
hpaA | 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein | chromosome | CDS | 1105511 | 897 | + | 0.513935 | |
hpcR | homoprotocatechuate degradative operon repressor | chromosome | CDS | 1097595 | 441 | - | 0.526077 | |
hutC | histidine utilization repressor | chromosome | CDS | 818643 | 726 | + | 0.566116 | |
iagA | invasion protein regulator | chromosome | CDS | 2871866 | 1662 | + | 0.430205 | |
invF | possible AraC-family regulatory protein | chromosome | CDS | 2895282 | 651 | - | 0.460829 | |
kdgR | probable global regulatory protein | chromosome | CDS | 3114814 | 687 | - | 0.573508 | |
kdgR | transcriptional regulator KdgR | chromosome | CDS | 1859271 | 792 | - | 0.496212 | |
lysR | transcriptional activator protein LysR | chromosome | CDS | 3031031 | 936 | + | 0.586538 | |
melR | melibiose operon regulatory protein | chromosome | CDS | 4386314 | 933 | - | 0.5209 | |
merD | putative mercuric resistance operon coregulator | pHCM1 | CDS | 171595 | 363 | - | 0.69697 | |
merD | putative mercuric resistance operon coregulator | pHCM1 | CDS | 117909 | 366 | + | 0.672131 | |
merR | putative mercuric resistance operon regulatory protein | pHCM1 | CDS | 114531 | 456 | - | 0.607456 | |
merR | putative mercuric resistance operon regulatory protein | pHCM1 | CDS | 174890 | 435 | + | 0.595402 | |
mucA | putative DNA-repair modulator | pHCM1 | CDS | 185798 | 435 | + | 0.521839 | |
nikR | nickel responsive regulator | chromosome | CDS | 4094257 | 402 | - | 0.547264 | |
ompR | two-component response regulator OmpR | chromosome | CDS | 4170266 | 720 | + | 0.565278 | |
pduD | diol dehydratase medium subunit | chromosome | CDS | 2076210 | 675 | + | 0.568889 | |
phnR | probable regulator of 2-aminoethylphosphonate uptake and metabolism operon | chromosome | CDS | 475558 | 720 | - | 0.591667 | |
pmrA | two-component response regulator | chromosome | CDS | 4378837 | 669 | - | 0.539611 | |
pocR | pdu/cob regulatory protein PocR | chromosome | CDS | 2070973 | 915 | - | 0.460109 | |
prpR | propionate catabolism operon regulatory protein | chromosome | CDS | 407663 | 1626 | - | 0.555351 | |
ptsJ | putative transcriptional regulator | chromosome | CDS | 2509322 | 1293 | + | 0.589327 | |
ramA | transcriptional activator RamA | chromosome | CDS | 623134 | 342 | + | 0.502924 | |
relA | GTP pyrophosphokinase | chromosome | CDS | 2958419 | 2235 | - | 0.5566 | |
rhlB | putative ATP-dependent RNA helicase | chromosome | CDS | 3496937 | 1266 | + | 0.546604 | |
rnr | ribonuclease R (RNase R) | chromosome | CDS | 4587425 | 2439 | + | 0.551455 | |
rpoA | DNA-directed RNA polymerase alpha chain | chromosome | CDS | 4245212 | 990 | + | 0.522222 | |
rpoH | RNA polymerase sigma-32 factor | chromosome | CDS | 4109216 | 855 | + | 0.540351 | |
rpoS | RNA polymerase sigma subunit RpoS (sigma-38) | chromosome | CDS | 2915077 | 993 | - | 0.523666 | |
rpoZ | DNA-directed RNA polymerase omega chain | chromosome | CDS | 3914247 | 276 | - | 0.536232 | |
rsD | putative regulatory protein | chromosome | CDS | 3569296 | 489 | + | 0.492843 | |
sinR | LysR-family transcriptional regulator SinR | chromosome | CDS | 348682 | 945 | + | 0.394709 | |
sirA | invasion response-regulator | chromosome | CDS | 2002473 | 657 | - | 0.512938 | |
slyA | transcriptional regulator | chromosome | CDS | 1606411 | 435 | - | 0.491954 | |
sopD | possible secreted protein | chromosome | CDS | 2935978 | 954 | + | 0.419287 | |
soxR | SoxR protein | chromosome | CDS | 4349505 | 459 | + | 0.551198 | |
soxS | regulatory protein SoxS | chromosome | CDS | 4349095 | 324 | - | 0.506173 | |
spoT | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156 | chromosome | CDS | 3912117 | 2112 | - | 0.536458 | |
sprA | possible AraC-family transcriptional regulator | chromosome | CDS | 2864110 | 888 | - | 0.363739 | |
sprB | possible AraC-family transcriptional regulator | chromosome | CDS | 2862970 | 756 | - | 0.451058 | |
ssrB | putative two-component response regulator | chromosome | CDS | 1649864 | 639 | + | 0.402191 | |
tctD | transcriptional regulator | chromosome | CDS | 2786824 | 675 | - | 0.548148 | |
tetR | tetracycline repressor protein | pHCM1 | CDS | 179219 | 627 | + | 0.401914 | |
tinR | transcriptional regulator | chromosome | CDS | 357131 | 456 | + | 0.315789 | |
treR | trehalose operon repressor | chromosome | CDS | 4654435 | 948 | - | 0.549578 | |
trpR | probable trp operon repressor | chromosome | CDS | 4792824 | 327 | + | 0.550459 | |
uxuR | uxu operon transcriptional regulator | chromosome | CDS | 4725066 | 774 | + | 0.549096 | |
yafC | hypothetical transcriptional regulator | chromosome | CDS | 293718 | 915 | - | 0.507104 | |
ybaO | hypothetical transcriptional regulator | chromosome | CDS | 509127 | 459 | + | 0.522876 | |
ybdO | putative lysR-family transcriptional regulator | chromosome | CDS | 652161 | 903 | - | 0.389812 | |
yfhH | putative transcriptional regulator | chromosome | CDS | 2681675 | 849 | + | 0.570082 | |
yjaB | putative acetyltransferase | chromosome | CDS | 4262945 | 438 | - | 0.488584 | |
yjeB | conserved hypothetical protein | chromosome | CDS | 4586962 | 426 | + | 0.485915 | |
yjfQ | probable transcriptional regulator | chromosome | CDS | 4598488 | 756 | - | 0.541005 | |
ytfH | conserved hypothetical protein | chromosome | CDS | 4617488 | 387 | + | 0.565891 | |
zntR | putative Zn(II)-responsive regulator | chromosome | CDS | 4247111 | 426 | + | 0.488263 |