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# Campylobacter jejuni subsp. jejuni NCTC 11168, NCTC 11168

>gid:322924  Cj0101  parB family protein
MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPFQPRKNF
DQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEI
LAFIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLA
ELIHKSRTQITNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKM
LVDSIIGQKLNVRDTEKIVKKIKNNESLPNQEFEDEIKKLKQILNRFGFD
CKNKNNDFVIHLENIDKIKKLIKMLEKL
>gid:322980  Cj0135  hypothetical protein Cj0135
MKKHIPIRMCIVCKNRFEQNMLFRFKVVLGDIVPKAEHGRSGYLCQNCIE
REDKVLQKAFSKICKNLNTKITQQGLKEIFLNGKD
>gid:323252  Cj0295  putative acetyltransferase
MLRKADIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQWEEKFK
YDEIFVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILK
TYLHNEIYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKILMKKDVIY
KN
>gid:323370  Cj0355c  two-component regulator
MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRHYDLVLA
NWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVK
KPLDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGK
PFEVLTHLARHSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDK
PLNISTIETVRRRGYRFCFPKKS
>gid:323393  Cj0368c  transcriptional regulatory protein
MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSGGSYSNI
YDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLAFI
EIFNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQN
NSYMKKNAEKLAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNV
FLNGINSSKA
>gid:323442  Cj0391c  hypothetical protein Cj0391c
MQVNTFSNIASMARTQVSNKKADDAKENTKDKNVQSANSSKDVDKNTLEK
LNALGGKGITQIYLVQFQQQTMNAVIGSSNAQTGLDSLLNGANLDTAKSI
LTNIDFASLGYSSKNPLDMNTDELQQLVSEDGFFGVENTANRIADFVIKG
GGDDVEKLKKGLEGMKKGFEQAEKMWGGELPQISQNTIDAALKKVSDRID
ELGGKTLDLQA
>gid:323448  Cj0394c  hypothetical protein Cj0394c
MLLCDIGNSNANFLDDNKYFTLNIDQFLEFKNEQKIFYINVNEHLKEHLK
NQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIIS
NSIHLGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSY
GVFKGIYLLIKDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKI
IKENPNLLY
>gid:323527  Cj0440c  putative transcriptional regulator
MMLFSNLIKENQKIWNAYLHHDFVKKLEDKSLKQENFLFYLKQDYIYLLN
YAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINADELD
IKDESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLK
NENLKDHPYKEWILTYGSENFQNEAKEFEDFVNSYTSSVGAQKFQKLSEI
FHTVTRLEVAFWEHSLRMELNL
>gid:323612  Cj0480c  putative transcriptional regulator
MHQPTLRVLNILELLAKEKLTLSAIAKKLNIPAGTLWPILQTLQEKKYIK
CDLKNKSYYLDFKIIELGCNIKNENNIFEIIKKHMKNIRNLTNQTCQMGI
LKDGNVLYLEKIDANNTVQLKSFIGTSYPAYATSLGKALLSNKNKKELEK
LYPKNFDKITENTLNNINELYQQIKQIKKEKIAIEIGEMNPQIECMAIGI
EHKNKIIAAISISYLIYCSNKAFREKNKKILLEEKNKIEKVLKIYFNDLD
TLY
>gid:323768  Cj0571  putative transcriptional regulator
MKEYDKLSIRLVQILSKFNNGESLSAQELAQEFNVDTRTIQRDLNERLTF
MPIKKENGRYVLESFALGKLSFKDIQNFATLSGIAELYPKLDQGFIVDLL
SHRVNKVLMVKNEGFQKVDYELFKDLSVAILKHNVLNFFYKEKERQIKPY
KLVNYKGIWYLLGDENDKLKHFNLDKISKLRTKNENFIPNEKLEEQIQND
PNIWLGESKEVILKLDKNAKEYFFRKEILSNYQIIDKDETSYTLSTQVSY
EDEILHLVKQWIPYIKILAPIELKIRLEDILKSYLNNLSK
>gid:323878  Cj0631c  putative ribonuclease
MKEFLNSLSYGISSHEVNNEFKQIFRELLTNHIIKEHKNKYYLNNGFAFG
VLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKR
PSAKVILVLKRANETSLMITKRYGEAVLGMNIKTGLSTALKASQKSLKAL
PLGTILKIENENNNIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEA
LANGDSVDASMYENRMDLRALPFCTIDPIHAKDFDDAIYFDTQKREIYVA
IADVSEYVYAYSAIDKEARNRGFSIYFPHIAIPMLPRPLSENICSLKPHL
DRLAYCFKITLNHENKVIKEELFEGIINSKRRFNYDEVDEILIQKPDLKE
LSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKSTVFEKDTP
SHNLIEDCMLLANKAAAKLIDIGVFRNHLSADVRKIDKLLNELRELGIDV
NFKPNLPELIRDIQALADELNLRAEVDKLIIKAQKKAEYSSVNAGHFGLG
FDKYSHFTSPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIESTCENLST
LEREADKVAFDFMDRKFARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKG
ADIILYDTRVNLLENVEVQIMEADIVMAKIYAKITQRLIKEENV
>gid:324312  Cj0883c  hypothetical protein Cj0883c
MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQTLAKD
GLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNK
EENCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK
>gid:324330  Cj0890c  putative sensory transduction transcriptional regulator
MLKFKILIIEDDIDLNELLVLKLKSSGYEVISLADFFGVEDLLDNEQIDL
LIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDD
YVCKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLVSYEFFYKNQKL
EISNLDYELLKCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRN
KFPKLKDHIISVRGIGYKLC
>gid:324485  Cj0962  putative acetyltransferase
MSEFKIIDLRQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHSLLKNKF
ARAFLLKENEKTIGYMIYFYTFSSFWGSGGIYLEDIYIREDFRKKGYGKA
VFKFLGEICKKENLKRLDWVCLNDNILGINFYESLNAKHLKQWRNYRLSG
ENLEKLCDL
>gid:324542  Cj1000  putative transcriptional regulator (lysR family)
MKIKDIEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFER
LGKKLLPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSI
SEHFLAPILFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELD
PALVEYENLEINFWQDDELIVATSDKKLNEKEFYIDELLEQKWILREVGS
GLRDKFLNEIGASSKKLNIFLELDRMAAIKELVLQKKAISIFSKKSIEKE
LKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNRALEKFEKIFKS
>gid:324623  Cj1042c  putative transcriptional regulatory protein
MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNVGSHLLTF
VRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFD
NAFLIELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENT
QILDPIVSLKFEEIFLHLLLNKNIYFISFLSGILKEFRLDLSQLFEYCGR
EFLSVNEMSNFAKLDLATFSKEFKKCFGQSPKKWLDEKRLQKAKILLKFS
KKNINEIANECAFSSVAWFIERFKEKYEQTPKQYQKTKNLYFLSKN
>gid:324635  Cj1050c  putative transferase
MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRKNPKKVL
DFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCK
DVVHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEE
QAPAYATLYSLLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVN
LERYFDKIYIEDIISAIDKIALDIENFMKDGNV
>gid:324660  Cj1063  possible acetyltransferase
MKEIKLKEDLEKIYPLIKQLRNNLSLKDFLDKIQLATQTQHYKLFAYENE
GSYKAACGVMPFNVLYHNHCLYICDFVVDEALRGKGIGQAFLKKIQIWAK
DQGYEELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL
>gid:324953  Cj1223c  putative two-component regulator
MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYERYFDLW
ILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDY
IKKPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNK
ALTLPSKEIKLLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKN
LRKILGKEKIINQRGRGYCYG
>gid:324961  Cj1227c  putative two-component regulator
MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALKEYQLII
LDLSLPGLDGLEVCEEIRKKYDTPIIVSSARHDITDKVNALELGADDYLP
KPYNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELT
LTNAEFDILSYLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQ
KMGDDPKTPKYIHSIRGIGYKLTQ
>gid:325109  Cj1309c  hypothetical protein Cj1309c
MTAYLHIGTTNTGNQEKQGFLMQNEEKLLQKAYIYPKSLRVANRHWALVD
MVLELVQKEDILKKESVLSHITNERLLRAIENFKSESALHKDKKFIFSAE
GIVWDFSTKKHVEILEKIMRELGFTQIYIIVYFRDTLGYLNSHCSQDHKN
NMGYYSADFAPQDHPRKYIFDYEWICKTHAEVFGEENLIVRLLREDYVGG
TLLKDFVYHLGLEWDESFVLKQTKNESFNLLGMELMSRLNQKDLKQDNLN
SLLFMARRKFEGSKEKRLKFAVQKDIAKAYVDYFASSLEWVKNKYFPHKN
SLFTPVNWEEYEQNYTLTHMLSKDWDDVADFIAQIIVSKNEIISSLKEQL
ELARKD
>gid:325178  Cj1349c  possible fibronectin/fibrinogen-binding protein
MKYTELLQLQTFFSRFKKIDFIKRINDNILELSFDRERFIFDLTRAMSAI
YTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYK
SYESKIYFEFTGKNTNVILTDEKDLIIEALRHIDKSYRVVKPNVILESLK
PYKMDENFEEIKDFADYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQE
LFSSLDEENSLLLKALEYRKRADVLFANLSVLKDYEREFKLDDFEGKELE
FKLEFNPKQSANLYYKNAKKLEQKAKNLNIQRQNLKEKLDFTLSLKELLL
QAKSEIELEILLPKKNSKKNQDHKQEDLVANFYFNEFKICVGKNEKGNEF
LLKNAKKDDLWLHVRDIPSAHTLIVSNKQKISLDVIEFAARLCVSFSKLK
KGSYWVDYTLKNFVKVQQKAFVNYTNFKSINITKD
>gid:325437  Cj1491c  putative two-component regulator
MSQECKELIILVVEDEVKARESMINILSERFSKVIGAQNGDEGLKKFKKF
KPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDI
GIDKYLIKPVDIEELFKVLDYLIGEKIEANMLVKISEEYQFNKTKRTLIY
SGGEIVLTKKELAFISLLLKQPGALVLHEDIKKNVWIGEHVSDTAVRTFI
KRVRDKVGEDFIKNVPSLGYKININK
>gid:325528  Cj1546  hypothetical protein Cj1546
MTKENSPCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNELKRFLS
SISFKTLTNTLRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAM
SKWGKKDKKGKKCLN
>gid:325538  Cj1552c  hypothetical protein Cj1552c
MIRTVMDFKFVLRLLEANQFENEVVEYKKNNKDFIVLGKNISALSNTAAL
LGIDKAYIIFGIEDGTLNIVGTNFKPKQEKKGNEELESWLHKVLKPNIEF
KIHEITEKEIRLVVFEIEATKISPIKFEEKAYIRIGSNRKELDKYPEKEK
KLWQVLSGFSFENEIAKSNLNIQDIYDLLDYSKCFDMLDISYDNYSSDEY
IIEKLIEHGLVKNLNDSFAITNLGAILFAKDLTKFKGLNRKRIRFIRYQG
KNKIHTLEELEGRKGYAIGFQGLISYIMQYVPKNEVIENAIRKDTTLYPE
IAIRELVANAIIHQDFTINGRNPMIEMYSDRIEITNNGKSLIDIKRLIDM
PSKSRNDKLANLMRIMGICEERGSGVDKVIDSVEAYQLPAPDFINNEDYF
QAILFSHMPLEDMTKQDRIRATYQHCCLKWASREAMTNASLRARFKIGDK
QHSKASKIISDTLEAGLIKQQDPENKSTKHVKYVPFFV
>gid:325542  Cj1556  hypothetical protein Cj1556
MKKYHSLCPIETTLNLIGNKWKILIIRDLLQGTKRFGELRKSISFTKNQN
ISQNVLTQNLRELEEAKLIKRKVYAEVPPKVEYSLTSLGNSLESILKSLE
NWGNSYKNIV
>gid:325546  Cj1561  putative transcriptional regulator
MQKFLAIISAINDESRVLILHHLLRYKELCVCDLQELLNMGQSRLSRHLK
ILKDAGFCM
>gid:325548  Cj1563c  putative transcriptional regulator
MAYTIKKVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKSDIEWVK
WIEWLRISGMPIEQVKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTL
KESEKVLSKKIKIYEEMLANEVDGFNPESKDYQPCDKLHKFKG
>gid:325653  Cj1608  possible two-component regulator
MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDIILLSTN
TNNFLKAVGQFKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELI
RKIKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNK
QSSADAFVFNYANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQA
LKAAEKEKLLDFIQNKNVILHTNSNTDDLKINCINLNDNEKNINSNEILT
IDEYVKYVIINYQNIFPDTDLSKKLGISRKSLWEKRKKYEISKKK
>gid:325877  Cj1715  putative acetyltransferase
MQNTIIQKAVNKDLNSILEITKDALNAMKTMNFHQWDENYPNEIVFQEDI
QAQELYVFKENDEILGFICINEKFKPEFYKQVIFNKNYDDKAFYLHRLAV
KQNAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFN
FCGNFDIPNYQDPFLAYEKILNQKAF
>gid:322854  fliA  putative RNA polymerase sigma factor for flagellar operon
MNSKKDEEMLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSS
IDVNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGSMLDYLRSLDV
MSRNNRKIIKDIDAIMDEYFLEHECEPDDEYLAKKLDLDVEKIKEVRTAH
AISYTLPIDEQIELYNEDNTLEKIEKEELLEKIHEVLDDLKERDQLIIQL
YYYEELSLKEISEILQISESRISQIHKKLLKKLRERLV
>gid:323239  greA  transcription elongation factor
MQKEPMSQFGYDKLAAELKDLKDNQRPAVVIEIDTARSHGDLKENAEYHA
AREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEK
ESKYTLVGICEGNLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFE
ILSINYEPLKF
>gid:324074  hrcA  putative heat shock regulator
MMKSRDKKDLILESIIQTYLLDNAPIGSNELNSNLCIPASTIRVYLKRLS
DEGLITQLHISSGRIPTILTMQNYWQNFWEKEQDKNIHIKNESFLKELSK
EFEIYCLVYGGRSLVLKEVLDLNTKFIVLDFEDEELVLKYEKEAWNFLQS
LIGLDLSSIEKIALRVHFIDLVEKIASLRQNLICYRSNEERAYQIYQNDE
FVKLLDCQIHRHFKESLEFEPLFKEGFMGLKVDAQFLGEDVNIILAGSVY
TDYKKILQYIKEAA
>gid:324971  hspR  putative heat shock transcriptional regulator
MEQHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKIRLYSQR
DIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQ
DKEAASKAVVKHKNSFDLIFYEKK
>gid:323863  hypB  hydrogenase isoenzymes formation protein
MCKDCGCSINSSHTHGHHHDHHHENPSLKEGKTIEVISKILSKNDEEAKH
NRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETN
NDALRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVG
NLVCPASYDLGEHLNVVLLSITEGSDKPQKYPVMFKKADIVLITKADLAH
HFDFDIKEATRLIKELNPRADIITLDAKNGTNMELWYKVLKLKKELF
>gid:324701  mfd  transcription-repair coupling factor
MQASFYEYLQNPKICELFLCKDEKQADLLAQVSRFKGLKTFVLPDFRAQF
GDDLRAFSKELFDLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNY
HIDKKQNFDLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEEN
PIRILLFGEEIESIRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFK
DKLEDFQSDALIHDINSLGFWCIDDFFDYLELDFLACEKFDINEYEKDIS
FVNAKILPQAKKFKELQSSYNKDFFEFHKNKKITLLAKNEALFKALELED
TQNIHFVKSDLRLNLISPEELIISLNQKEKQKTRKKASLIIDELKNGDYI
VHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVENLYLIDKYL
GVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
TVDLNRQTDFIASAGFIYTSDQDKACHEILQDFQSGKVMDRLLSGDVGFG
KTEVAMNAIYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKL
DRFTSSAEKKQVLQNLKENKACVVVGTHALLSVECENLALVIIDEEHKFG
VKQKEKLKEITQNSHILSMSATPIPRSLNQALSSIKSYSVLQTPPEDRMD
VRTFVKENDDALLKEAIARELRRGGQIFYIHNHIASIEQCKKHLLELFST
LRILILHSKIDAKMQEEEMLKFENKEYDLLLSTSIVESGIDLPNANTIIV
EKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSLES
NSFLGAGSILAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNA
LSKNEVDQKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEV
YEIESEIEDRFGKLDIYTKQFLSLITIKILALNKFKSISNYEQNIQFTAL
NDEKELIKAKSKDDDDILEAILTHLRKA
>gid:323559  nusA  transcription termination factor
MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEFFVDPKN
LNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLE
NLGRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEEN
TFIEIDELRAFLPRKNRIKGEKFKIGDVVKAVIRRVYTDKGIKIELSRTS
PKFLECLLEAEVPEIKDGYVNIIGCARIPGERAKIILQANGTNIDPVGAT
VGVKGVRINAVSKELHNENIDCIEFTNESEILISRALAPAIVNSVKIEDK
KAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIELNELSSSQLNNAISNE
EAMKNLQDLFKI
>gid:323419  nusB  transcription termination protein
MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNFTLNLYN
GILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIV
INEAIELAKELANDNSPKFINGVLDALIKAKK
>gid:323593  nusG  putative transcription antitermination protein
MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTEDVIEFK
NGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLT
EKDINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVR
GLLKLNVSIFGRSTPVEILYSQVEKII
>gid:325019  racR  two-component regulator
MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQGYDCLIL
DLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPK
PYDPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDERRHEITYEDKVLT
LTPAEFEILEYLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVK
IGDSSKSPKHIFSVRGIGYKLIG
>gid:323563  recG  ATP-dependent DNA helicase
MKIKESDFEFFKKLKIRSAIDLALLLPKKIENLNPSKNPKENEICTQKIT
IKSVSSRKNQLFGLGFCEEWQENISFVFFHPRAWHFGICKVGKELIFNAK
LSHFNHTWQFNNPKILTSFEGFSPKYQILGLKDTKIAAFIHKYLNYENLK
ESGIEDKYIHFLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKA
KKTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKDLHSKEAKRRV
IMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAYQLYEEAKKFLPDFM
NILFIKGGKKEKDLEQNIQKANLVIGTHALIHLESHNAVLVMIDEQHRFG
SAQREKIHSLNKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFK
KDITTYCIQNEGFSKLSEKIKEEIAKNHQIIIIYPLLSASDKIPYLSLEQ
AKEYWQSHYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPR
LSMIVIVGAERLGLATLHQLRGRVGRVGLKSACYLYTKLKEIPSRLKEFA
STLDGFKIAELDLKNRLSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKD
LAKKLPN
>gid:324825  rho  transcription termination factor
MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPREFRRQE
LIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSN
SQIKKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLF
DNLTPIFPTEKIKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTE
LMKELATAIAKNHPEMHLIVLLVDERPEEVTDMQRCVKGEVFSSTFDLPA
YNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFK
GTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQKIWAIRSA
ISQMDDVEALKFLYSKMLKTKDNVELLSIMNE
>gid:325700  rnc  ribonuclease III
MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGDAVLDLV
VGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAEE
NNGGKEKPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKI
LIKDYKTKLQEITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELAR
AIAGSKKEAQQMAAKIALEKLGAL
>gid:325625  rpoA  DNA-directed RNA polymerase alpha chain
MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLRRLLYTS
TIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGDSNKEI
VEFSFKGSKEIYGKDLNNDQVEVVNKDAYLATINEDAELKFTLIVEKGIG
YVPSEEIKELINDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLT
VTTDGQITPNEAFQNALEAMYKQLSVFDKITNVRSVIKNQATSNELENTK
LLQNITDLNLSARSYNCLEKAGVVYIGELALMSVSELAGLKNLGKKSLDE
IKNIMESIGFPVGTSKLSDNKEILKNKIAELKAQNEG
>gid:323607  rpoB  DNA-directed RNA polymerase beta chain
MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLDNGESGI
EKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMK
IRLTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVV
NQLHRSPGVIFKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVR
INKRRKVPVTMLFRALGYKKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFM
DRIEYDIKDEKGKIVHQAGKRLTKKKAEQLIKDGLKWIEYPVEILLNRYL
ANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSFDIANDLANGVDAAIIN
SFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKDAAKAFVND
LFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLD
KVMPYDLINPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGE
GGLVKERAGFEVRDVHATHYGRICPVETPEGQNIGLINTLSTYAKVNELG
FVEAPYRKVVNGKVTNEVVYLTATQEEGLFIAPASTKVDAKGNIVEEFVE
ARQDGETILARREEVQLIDLCSGMVVGVAASLIPFLEHDDANRALMGSNM
QRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVEKVDNKSIFIL
GEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGPSM
DQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIE
ARELKDGIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSP
KGEVKPTPEERLLRAIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGY
EKDDRAIKSYDKEKMALEKEHHDRLLMMDREEMLRVCALLSKASLNSDQK
IGDKNYKKGQTADISELEKINRFTLTTLIKAYSKEIQKEYDDLKNHFQNE
KKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRKLKVGDKMAGRHG
NKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHLGLVG
LRLGDQIQEIFDRKQKDFLKELRAKILEICSIPRLANEKEFIKSLSDEEL
LNYARDWSKGVKFSTPVFEGVNIEEFSKLFKMAKIDMDGKTELYDGRTGE
KIAERVHVGCMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQR
FGEMEVWALEAYGAAHTLREMLTIKSDDVEGRFSAYKALTKGENVPATGI
PETFFVLTNELKSLALDVEIFDKDEDNE
>gid:323610  rpoC  DNA-directed RNA polymerase beta' chain
MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTL
KPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRR
SRMGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENP
GDAFYDNESTKKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLA
NLDLVALLNQLKEEMGATNSEAKKKTIIKRLKVVENFLNSNLNANTDSDE
AVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLS
EIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFK
PHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIA
ECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICT
GIDEVMMALESKCLDIHASIQTMVDGRKITTTAGRLIVKSILPDFVPENS
WNKVLKKKDIAALVDYVYKQGGLEITASFLDRLKNLGFEYATKAGISISI
ADIIVPNDKQKAIDEAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNN
VLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAAMRGLMTKPDG
SIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKLID
VAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPI
TNSVLFAEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGIN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSA
QKEGFIRFYNLKTYKNKEGKNIVANRRNAAVLLVEPKIKTPFKGVINIEN
IHEDVIVSIKDKKQEVKYILRKYDLAKPNELAGVSGSIDGKLYLPYQSGM
QVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQNIKAGEKGTLKF
YILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRESKIEF
NDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAG
YSADEQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYHLEPKTVI
FVHDGDKIAQADILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIA
EIDGVVRFDKPLRSKERIIIQAEDGTSAEYLIDKSKHIQVRDGEFIHAGE
KLTDGVVSSHDVLKILGEKALHYYLISEIQQVYRGQGVVISDKHIEVIVS
QMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIRMGGEPAIAEPVLLG
VTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIP
VGTGLYGEQNLKLKEQE
>gid:324544  rpoD  RNA polymerase sigma factor (sigma-70)
MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTTKKVQALMKKH
KVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWS
RSDSPVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLID
FILDYKEPLINRERRVKELFKSFDDEEKSDDKLDELDIDEDEENETELES
DEENTKKNSKKEDERTLKVIEKFKALEKAKKDWLKTSKDKESGDELLDKL
SIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRLEYR
LPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTYMEIKKLFQTK
EASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKRY
TNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIA
DQARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKV
KQVIKITKEPISLEAPIGNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQI
DEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQIESS
AIKKLKHPKVGRKLKNYIEGWK
>gid:323945  rpoN  RNA polymerase sigma-54 factor
MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNPFLNVQD
SIQTHDKGKNYFDSFYKHNVNSAFVDSKGLAKKSVYELLNEQILPPLFPT
SKSQELAKKIIECLNEEGYFEHDEEFLKEYSLEEIERVRARFKFLDPVGV
GAKDYKEAFLFALENMELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALA
VLKRFSTPPFLEYFEDSRIIVPDIFVYKENGEIKVKINDDYYPEISIQTD
GLEHDFLSHYIKEAKNLVDALAMRKATLYKIGLMIVEYQYDFFMGKEIKP
MTFKDLALDLERNASTISRAVANKYLSCERGLIPLRDFFAFALDEEGETS
NVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRTITKYRKHL
NIASSTDRKKLYELEG
>gid:325043  rpoZ  putative DNA-directed RNA polymerase omega chain
MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATPLVDFDKNKNK
LADIALYEIAENKITLEGLVETNR
>gid:325042  spoT  putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAVDYCIFC
HEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEE
ELREQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLA
SIEDVGVLIVKLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGI
SSIKNYLEDLSFKYLMPDEYKLIDNYINSNNQEMQLGLNEFISKIELLFL
SNGFRQGSFEIQKRIKHSYSIYLKMQRKGIGIEEVLDLLGVRILVEKVSD
CYLALGILHTHFNPLVSRFKDYIALPKQNGYQTIHTTLFDAKSIIEAQIR
TFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINNLENAEDYN
AIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
KSAYVNRIKVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIR
EFCKQKIREINLASSINMLSFIFGVDKNRIETWIEKENLVRRIRQVATDS
AYLKDIVNGLKKYAKKSYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCC
HPKRGDAVLAFVKGGNAIVHHKLCDRADKMIDNNQDMVFIKWDSNIPKSY
KLIFSLENKKGVLAEFLAFLAKMQINLLTINLSSDLNSAVDYFEITMEIP
DNINPDSVKDRLKSRCKILDFTSLNDAYKES