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2024-04-29 01:43:23

Gene list

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COG category: Transcription
Organism: Dehalococcoides sp. CBDB1, CBDB1

Number of genes found: 105

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Dehalococcoides sp. CBDB1, CBDB1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA cbdbA1710 transcriptional regulator, AbrB familychromosome CDS1373696 273 + 0.487179
NA cbdbA948 conserved hypothetical proteinchromosome CDS775146 315 - 0.457143
NA cbdbA1223 transcriptional regulator, MerR familychromosome CDS983208 753 - 0.460823
NA cbdbA595 histone acetyltransferase, ELP3 familychromosome CDS487987 1380 + 0.517391
NA cbdbA1288 DNA-binding proteinchromosome CDS1021195 210 + 0.404762
NA cbdbA1532 putative transcriptional regulatorchromosome CDS1218773 1050 + 0.466667
NA cbdbA189 ATP-dependent RNA helicase, DEADchromosome CDS172497 1686 + 0.514235
NA cbdbA286 conserved hypothetical proteinchromosome CDS251537 528 + 0.496212
NA cbdbA610 response regulatorchromosome CDS498581 960 - 0.466667
NA cbdbA1075 DNA-binding response regulator, LuxR familychromosome CDS872580 744 - 0.439516
NA cbdbA1083 putative transcriptional regulator, PadR-like familychromosome CDS878796 549 + 0.429872
NA cbdbA1533 conserved hypothetical proteinchromosome CDS1220195 612 + 0.388889
NA cbdbA937 acetyltransferase, GNAT familychromosome CDS766702 630 + 0.438095
NA cbdbA108 putative helicase (Snf2 family)chromosome CDS97184 3102 + 0.411992
NA cbdbA1041 DNA-binding response regulator, LuxR familychromosome CDS843260 699 - 0.469242
NA cbdbA1466 transcriptional regulator, MarR familychromosome CDS1157870 447 + 0.404922
NA cbdbA523 DNA-binding proteinchromosome CDS423748 204 + 0.490196
NA cbdbA381 transcriptional regulatorchromosome CDS321374 792 + 0.502525
NA cbdbA1404 transcriptional regulator, TetR familychromosome CDS1118933 621 + 0.478261
NA cbdbA158 DNA-binding response regulatorchromosome CDS148425 693 + 0.50938
NA cbdbA1483 hypothetical proteinchromosome CDS1168911 636 - 0.444969
NA cbdbA1383 conserved hypothetical proteinchromosome CDS1101923 249 + 0.481928
NA cbdbA1264 acetyltransferase, GNAT familychromosome CDS1010876 804 - 0.508706
NA cbdbA1647 transcriptional regulator, MerR familychromosome CDS1332468 678 - 0.438053
NA cbdbA1361 heat-inducible transcription repressor HrcAchromosome CDS1079717 1038 - 0.480732
NA cbdbA647 DNA-binding response regulator, LuxR familychromosome CDS532230 675 - 0.485926
NA cbdbA1412 excisionase family DNA binding proteinchromosome CDS1122011 414 - 0.475845
NA cbdbA1611 transcriptional regulator, MerR familychromosome CDS1301068 432 - 0.476852
NA cbdbA1165 TfoX domain proteinchromosome CDS945895 336 - 0.446429
NA cbdbA151 DNA-binding response regulatorchromosome CDS144940 372 - 0.465054
NA cbdbA936 puromycin N-acetyltransferase, homologchromosome CDS766077 666 + 0.43994
NA cbdbA1198 conserved hypothetical proteinchromosome CDS969068 231 - 0.493506
NA cbdbA784 conserved hypothetical proteinchromosome CDS639972 300 - 0.476667
NA cbdbA1330 conserved hypothetical proteinchromosome CDS1054831 282 + 0.432624
NA cbdbA1665 hypothetical proteinchromosome CDS1345710 138 - 0.5
NA cbdbA952 acetyltransferase, GNAT familychromosome CDS779542 318 - 0.449686
NA cbdbA1373 putative transcriptional regulator, MerR familychromosome CDS1092469 306 + 0.46732
NA cbdbA1168 transcriptional regulator, ArsR familychromosome CDS947004 300 + 0.393333
NA cbdbA857 putative DNA-binding proteinchromosome CDS702049 645 - 0.404651
NA cbdbB7 conserved hypothetical proteinchromosome CDS90541 234 + 0.448718
NA cbdbA1032 DNA-binding response regulatorchromosome CDS833548 684 + 0.476608
NA cbdbA966 transcriptional regulator, ArsR familychromosome CDS788822 339 + 0.474926
NA cbdbA1291 transcriptional regulator, AsnC familychromosome CDS1023154 483 + 0.482402
NA cbdbA1298 RNA polymerase sigma-70 factor, ECF subfamilychromosome CDS1029707 540 - 0.481481
NA cbdbA137 transcriptional regulator, TetR familychromosome CDS129925 660 - 0.456061
NA cbdbA63 transcriptional repressor, ROK familychromosome CDS40843 1008 + 0.531746
NA cbdbA1053 response regulatorchromosome CDS855674 672 - 0.44494
NA cbdbA276 putative DNA-binding proteinchromosome CDS242867 402 - 0.495025
NA cbdbA1470 conserved hypothetical proteinchromosome CDS1159007 777 - 0.503218
NA cbdbA488 conserved hypothetical proteinchromosome CDS395418 423 + 0.479905
NA cbdbA1277 acetyltransferase, GNAT familychromosome CDS1016447 459 + 0.470588
NA cbdbB6 hypothetical protein, containing a helix-turn-helix motifchromosome CDS85242 372 + 0.427419
NA cbdbA1301 DNA-binding response regulator, LuxR familychromosome CDS1030853 678 + 0.458702
NA cbdbA386 DNA-binding response regulator, LuxR familychromosome CDS327230 699 - 0.480687
NA cbdbA1085 transcriptional regulator, MarR familychromosome CDS879535 480 + 0.452083
NA cbdbA1685 putative transcriptional regulatorchromosome CDS1356390 447 - 0.474273
greA cbdbA743 transcription elongation factor GreAchromosome CDS607527 513 - 0.442495
hypB cbdbA1397 hydrogenase accessory protein HypBchromosome CDS1113512 654 + 0.480122
kamA cbdbA219 L-lysine 2,3-aminomutase homologe, probable frameshiftchromosome CDS195748 2127 + 0.480959
lexA cbdbA1740 LexA repressorchromosome CDS1393298 645 + 0.51938
mfd cbdbA1211 transcription-repair coupling factorchromosome CDS975541 3447 - 0.501305
nusA cbdbA949 N utilization substance protein Achromosome CDS775435 1476 - 0.466125
nusB cbdbA1206 N utilization substance protein Bchromosome CDS972996 432 + 0.460648
nusG cbdbA958 transcription antitermination protein NusGchromosome CDS783048 534 - 0.47191
rdhD cbdbA184 DNA-binding response regulatorchromosome CDS167058 681 - 0.43906
rdhD cbdbA78 DNA-binding response regulatorchromosome CDS58960 708 - 0.379943
rdhD cbdbA1564 DNA-binding response regulatorchromosome CDS1250136 693 - 0.388167
rdhD cbdbA1567 probable regulatory protein, LuxR domainchromosome CDS1253762 975 - 0.428718
rdhD cbdbA1602 response regulatorchromosome CDS1293398 1056 + 0.446023
rdhD cbdbA240 DNA-binding response regulatorchromosome CDS210286 684 - 0.369883
rdhD cbdbA235 DNA-binding response regulatorchromosome CDS205920 678 - 0.384956
rdhD cbdbA1511 DNA-binding response regulatorchromosome CDS1196848 672 + 0.389881
rdhD cbdbA1630 DNA-binding response regulatorchromosome CDS1322419 678 + 0.439528
rdhD cbdbA1552 DNA-binding response regulatorchromosome CDS1240329 693 - 0.380952
rdhD cbdbA100 DNA-binding response regulator, LuxR familychromosome CDS84186 687 + 0.36099
rdhD cbdbA1589 DNA-binding response regulatorchromosome CDS1276045 678 - 0.461652
rdhD cbdbA1548 DNA-binding response regulator, LuxR familychromosome CDS1236600 717 + 0.382148
rdhD cbdbA83 DNA-binding response regulatorchromosome CDS66580 702 + 0.37037
rdhD cbdbA1544 DNA-binding response regulatorchromosome CDS1232301 687 + 0.411936
rdhD cbdbA90 DNA-binding response regulatochromosome CDS75349 684 - 0.406433
rdhD cbdbA1551 DNA-binding response regulatorchromosome CDS1239510 642 - 0.366044
rdhD cbdbA1497 DNA-binding response regulatorchromosome CDS1186279 672 + 0.397321
rdhD cbdbA1493 DNA-binding response regulatorchromosome CDS1180453 684 + 0.421053
rdhR cbdbA1534 transcriptional regulator, MarR family,probablechromosome CDS1221553 489 + 0.376278
rdhR cbdbA1583 transcriptional regulator, MarR familychromosome CDS1271952 522 - 0.43295
rdhR cbdbA1571 transcriptional regulator, MarR familychromosome CDS1259380 507 + 0.366864
rdhR cbdbA1553 transcriptional regulator, MarR familychromosome CDS1241686 513 + 0.380117
rdhR cbdbA1456 transcriptional regulator, MarR familychromosome CDS1149998 591 + 0.414552
rdhR cbdbA1091 transcriptional regulator, MarR familychromosome CDS885119 462 - 0.426407
rdhR cbdbA1509 transcriptional regulator, MarR familychromosome CDS1195021 540 + 0.381481
rdhR cbdbA1576 transcriptional regulator, MarR familychromosome CDS1265283 477 + 0.373166
rdhR cbdbA1619 transcriptional regulator, MarR familychromosome CDS1311430 525 + 0.438095
rdhR cbdbA1596 transcriptional regulator, MarR familychromosome CDS1285082 516 + 0.418605
rdhR cbdbA1625 transcriptional regulator, MarR familychromosome CDS1318637 489 + 0.396728
rdhR cbdbA1622 transcriptional regulator, MarR familychromosome CDS1315966 435 - 0.425287
rdhR cbdbA1616 transcriptional regulator, MarR familychromosome CDS1308689 450 - 0.46
rdhR cbdbA855 transcriptional regulator, MarR familychromosome CDS698589 486 + 0.438272
recG cbdbA1194 ATP-dependent DNA helicase RecGchromosome CDS963716 2223 + 0.507872
relA cbdbA5 GTP pyrophosphokinasechromosome CDS6017 2187 - 0.512574
rho cbdbA1369 transcription termination factor Rhochromosome CDS1087496 1275 - 0.531765
rnc cbdbA994 ribonuclease IIIchromosome CDS806931 714 + 0.469188
rpoA cbdbA466 DNA-directed RNA polymerase, alpha subunitchromosome CDS379643 993 + 0.469285
rpoB cbdbA586 DNA-directed RNA polymerase, beta subunitchromosome CDS476185 3822 + 0.490058
rpoC cbdbA587 DNA-directed RNA polymerase, beta' subunitchromosome CDS479993 3888 + 0.502058
rpoD cbdbA525 RNA polymerase, sigma factorchromosome CDS426698 1563 - 0.50032