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2024-05-18 08:00:40

Gene list

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COG category: Transcription
Organism: Francisella tularensis subsp. tularensis SCHU S4, SCHU S4

Number of genes found: 60

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Francisella tularensis subsp. tularensis SCHU S4, SCHU S4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA FTT1119 LysR transcriptional regulator family proteinSubName: Full=LysR transcriptional regulator family protein; chromosome CDS1129204 876 + 0.295662
NA FTT1706 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1783639 624 + 0.280449
NA FTT1384c AcetyltransferaseSubName: Full=Acetyltransferase; chromosome CDS1429150 492 - 0.276423
NA FTT1401 prophage repressor proteinSubName: Full=Prophage repressor protein; chromosome CDS1451114 666 + 0.322823
NA FTT0985 conserved hypothetical proteinRecName: Full=UPF0301 protein FTT_0985; chromosome CDS995236 585 + 0.305983
NA FTT1395c ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; chromosome CDS1442523 1431 - 0.30608
NA FTT0977c conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS988575 294 - 0.285714
NA FTT0383 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS385686 336 + 0.321429
NA FTT1652c transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS1718904 870 - 0.314943
NA FTT0112 transcriptional regulatorRecName: Full=Type III pantothenate kinase 1; EC=2.7.1.33; AltName: Full=PanK-III 1; AltName: Full=Pantothenic acid kinase 1; chromosome CDS121036 777 + 0.346203
NA FTT1613 BolA-like proteinSubName: Full=BolA-like protein; chromosome CDS1676801 237 + 0.295359
NA FTT1255c transcriptional regulator araC family proteinSubName: Full=Transcriptional regulator araC family protein; chromosome CDS1276495 849 - 0.368669
NA FTT0661c conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS680317 297 - 0.340067
NA FTT1594 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS1658686 993 + 0.308157
NA FTT0864c transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS873895 897 - 0.306577
NA FTT1684 transcription regulatorSubName: Full=Transcription regulator; chromosome CDS1753817 903 + 0.30897
NA FTT0257 Ribonuclease II family proteinSubName: Full=Ribonuclease II family protein; EC=3.1.-.-; chromosome CDS273192 1857 + 0.330102
NA FTT1285c LysR transcriptional regulator family proteinSubName: Full=LysR transcriptional regulator family protein; chromosome CDS1303154 891 - 0.292929
NA FTT0932 ROK family proteinSubName: Full=ROK family protein; EC=2.7.1.-; chromosome CDS944104 852 + 0.339202
NA FTT1392 transcriptional regulatorRecName: Full=Type III pantothenate kinase 2; EC=2.7.1.33; AltName: Full=PanK-III 2; AltName: Full=Pantothenic acid kinase 2; chromosome CDS1436185 771 + 0.346303
NA FTT1557c Two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1618777 687 - 0.320233
NA FTT1267 LysR transcriptional regulator family proteinSubName: Full=LysR transcriptional regulator family protein; chromosome CDS1288617 897 + 0.277592
NA FTT1351 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1390295 624 + 0.280449
NA FTT0748 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS770328 720 + 0.326389
NA FTT0244 DNA/RNA helicaseSubName: Full=DNA/RNA helicase; EC=3.6.1.-; chromosome CDS255556 2742 + 0.314004
NA FTT0970 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS982380 411 + 0.326034
NA FTT1202 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS1220492 900 + 0.328889
NA FTT1010 Helix-turn-helix family proteinSubName: Full=Helix-turn-helix family protein; chromosome CDS1021669 204 + 0.254902
NA FTT0868c arsenical restistance operon repressorSubName: Full=Arsenical restistance operon repressor; chromosome CDS879014 366 - 0.325137
NA FTT1075 transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1087105 228 + 0.350877
NA FTT1543 two component response regulatorSubName: Full=Two component response regulator; chromosome CDS1605332 690 + 0.343478
NA FTT1072 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1084047 630 + 0.314286
cscK FTT1331 FructokinaseSubName: Full=Fructokinase; EC=2.7.1.4; chromosome CDS1360265 900 + 0.36
csp FTT1172c cold shock protein (DNA-binding)SubName: Full=Cold shock protein (DNA-binding); chromosome CDS1186892 432 - 0.293981
cspA FTT0751c cold shock proteinSubName: Full=Cold shock protein; chromosome CDS773356 204 - 0.348039
cspC FTT0391c cold shock proteinSubName: Full=Cold shock protein; chromosome CDS393015 204 - 0.318627
deaD FTT1471c Cold-shock DEAD-box protein ARecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1522498 1710 - 0.346784
greA FTT1313c transcriptional elongation factorRecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1339377 483 - 0.343685
lysR FTT0492c transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS512055 927 - 0.290183
mfd FTT0644c Transcription-repair coupling factor,ATP-dependentRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS663035 3426 - 0.304729
nusA FTT0049 N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS49192 1470 + 0.343537
nusB FTT1418c N utilisation substance protein BSubName: Full=N utilisation substance protein B; chromosome CDS1468948 426 - 0.333333
nusG FTT0139 transcription antitermination protein nusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS151907 534 + 0.383895
oxyR FTT0556c oxidative stress transcriptional regulatorSubName: Full=Oxidative stress transcriptional regulator; chromosome CDS574231 870 - 0.302299
parB FTT0908 chromosome partition protein BSubName: Full=Chromosome partition protein B; chromosome CDS916841 915 + 0.343169
recG FTT1601c ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS1668702 2040 - 0.342647
relA FTT1508c GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; chromosome CDS1561699 1944 - 0.341564
rhlE FTT0952 ATP-dependent RNA helicase RhlESubName: Full=ATP-dependent RNA helicase RhlE; chromosome CDS964146 1326 + 0.323529
rho FTT1446 transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS1492812 1263 + 0.398258
rnc FTT1555c Ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS1617210 693 - 0.333333
rnr FTT1553c Ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS1614025 2298 - 0.339861
rpoA1 FTT0350 DNA-directed RNA polymerase, alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha 1; Short=RNAP subunit alpha 1; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha 1; AltName: Full=Transcriptase subunit alpha 1; chromosome CDS349599 972 + 0.330247
rpoA2 FTT1442c DNA-directed RNA polymerase, alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha 2; Short=RNAP subunit alpha 2; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha 2; AltName: Full=Transcriptase subunit alpha 2; chromosome CDS1488808 957 - 0.324974
rpoB FTT0144 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS154923 4077 + 0.354427
rpoC FTT0145 DNA-directed RNA polymerase, beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS159061 4254 + 0.366714
rpoD FTT1035c RNA polymerase sigma-70 factorRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS1046442 1734 - 0.322953
rpoH FTT1112c RNA polymerase sigma-32 factorRecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS1122309 879 - 0.353811
rpoZ FTT0703 DNA-directed RNA polymerase omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS721960 219 + 0.319635
spoT FTT0808 Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase/(p)ppGpp synthaseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase/(P)ppGpp synthase; EC=2.7.6.5; EC=3.1.7.2; chromosome CDS827817 2124 + 0.3258
trpR FTT1803c trp operon repressorSubName: Full=Trp operon repressor; chromosome CDS1890129 288 - 0.229167