TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-04 16:35:54

Gene list

Applied filters:

COG category: Transcription
Organism: Idiomarina loihiensis L2TR, L2TR

Number of genes found: 163

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA IL2218 Transcription regulatorchromosome CDS2371878 558 + 0.521505
NA IL1744 Predicted transcriptional regulator containing the HTH domainchromosome CDS1877730 573 - 0.472949
NA IL2423 DNA-directed RNA polymerase specialized sigma factorchromosome CDS2595386 1074 + 0.512104
NA IL0606 Transcriptional regulator, LysR familychromosome CDS656085 936 - 0.503205
NA IL2041 Predicted transcriptional regulator, YjeB/RRF2 familychromosome CDS2183508 480 - 0.49375
NA IL2384 Transcriptional regulator, TetR familychromosome CDS2555978 591 - 0.461929
NA IL1408 NtrC family transcriptional regulatorchromosome CDS1509939 1377 - 0.452433
NA IL0047 Transcriptional regulator, DeoR familychromosome CDS50780 945 + 0.522751
NA IL0640 Predicted transcriptional regulatorchromosome CDS694516 204 + 0.45098
NA IL0008 Acetyltransferase, GNAT familychromosome CDS10174 492 + 0.45935
NA IL2095 Transcriptional regulator, LysR familychromosome CDS2230072 843 + 0.512456
NA IL1290 Transcriptional regulator, HTH motif containingchromosome CDS1386909 273 - 0.490842
NA IL1609 Transcriptional regulator, LysR familychromosome CDS1725188 918 + 0.473856
NA IL1206 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS1294489 624 - 0.448718
NA IL2601 Hypothetical proteinchromosome CDS2797081 345 + 0.391304
NA IL0465 Transcriptional regulator, LysR familychromosome CDS485780 879 - 0.510808
NA IL0571 Uncharacterized conserved proteinchromosome CDS606573 636 + 0.40566
NA IL1648 Response regulator (CheY, wHTH domains)chromosome CDS1763285 666 - 0.438438
NA IL1291 Transcriptional regulator, LysR familychromosome CDS1387680 912 - 0.460526
NA IL1815 Acetyltransferase, GNAT familychromosome CDS1948655 426 - 0.420188
NA IL1208 Response regulator containing a CheY-like receiver domain and an HD-GYP domainchromosome CDS1296982 1563 + 0.472809
NA IL2391 Predicted transcriptional regulator, YjeB/RRF2 familychromosome CDS2564106 453 - 0.445916
NA IL1601 Transcriptional regulator, TetR familychromosome CDS1718490 600 + 0.49
NA IL0628 Transcription elongation factor greA/greB familychromosome CDS685670 456 + 0.423246
NA IL1428 Transcriptional regulator, GntR familychromosome CDS1538913 690 - 0.452174
NA IL2449 Acetyltransferase, GNAT family fused to PaaI related uncharacterized conserved domainchromosome CDS2620162 903 + 0.504983
NA IL1261 Response regulator of the LytR/AlgR familychromosome CDS1351227 819 + 0.438339
NA IL1772 Transcriptional regulator, LysR familychromosome CDS1906222 912 - 0.502193
NA IL0071 Transcriptional regulator, TetR familychromosome CDS74021 612 + 0.488562
NA IL0053 Transcriptional regulator, LysR familychromosome CDS55214 897 + 0.487179
NA IL0054 DNA-directed RNA polymerase specialized sigma subunitchromosome CDS56928 543 + 0.418048
NA IL1093 Transcriptional regulator, LysR familychromosome CDS1177995 894 + 0.489933
NA IL0627 Transcriptional regulator, LysR familychromosome CDS684630 873 + 0.457045
NA IL1227 Uncharacterized conserved membrane proteinchromosome CDS1320901 732 - 0.404372
NA IL0277 Transcriptional regulator, TetR familychromosome CDS292275 621 - 0.492754
NA IL2485 Transcriptional regulator, AraC familychromosome CDS2661930 813 + 0.461255
NA IL0692 Transcriptional regulator, TetR familychromosome CDS746456 627 - 0.473684
NA IL0923 Response regulator containing a CheY-like receiver domain and an HD-GYP domainchromosome CDS976133 1473 - 0.474542
NA IL1254 Transcriptional regulator, LysR familychromosome CDS1344234 846 - 0.457447
NA IL2267 Signaling protein (CHEY,EAL,GGDEF domains)chromosome CDS2424438 2214 - 0.443541
NA IL0865 Transcriptional regulator, LysR familychromosome CDS921834 900 - 0.478889
NA IL1611 Transcriptional regulator, LysR familychromosome CDS1727013 852 + 0.448357
NA IL0166 Response regulator with a Fis-type DNA-binding domain (CheY, Fis domains)chromosome CDS176538 522 - 0.480843
NA IL0357 Transcriptional regulator, MarR familychromosome CDS373929 489 + 0.476483
NA IL1936 DNA-directed RNA polymerase specialized sigma subunitchromosome CDS2062980 528 - 0.458333
NA IL0592 Transcriptional regulator, Cro/CI familychromosome CDS637685 282 - 0.460993
NA IL1871 Predicted transcriptional regulatorchromosome CDS1999986 450 - 0.48
NA IL0314 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS323304 597 + 0.460637
NA IL2419 Transcriptional regulator, Cro/CI familychromosome CDS2592180 576 + 0.454861
NA IL2153 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS2291989 651 - 0.451613
NA IL0527 Transcriptional regulator, Cro/CI/xre familychromosome CDS553919 270 + 0.448148
NA IL0302 Transcriptional regulator, Cro/CI/xre familychromosome CDS314131 303 + 0.412541
NA IL0060 Membrane associated protein containing LuxR-like DNA-binding HTH domainchromosome CDS61796 510 - 0.456863
NA IL2193 Transcriptional regulator, LysR familychromosome CDS2342638 996 - 0.466867
NA IL1391 DNA-directed RNA polymerase specialized sigma subunitchromosome CDS1494619 621 + 0.438003
NA IL2204 Serine/threonine protein kinasechromosome CDS2354926 1338 + 0.488042
NA IL1491 ATP-dependent RNA helicasechromosome CDS1598576 1119 + 0.503128
NA IL2491 Transcriptional regulator, LysR familychromosome CDS2670905 858 + 0.475524
NA IL0033 Cold shock proteinchromosome CDS36876 207 - 0.425121
NA IL0918 Transcriptional regulator, TetR familychromosome CDS971350 627 - 0.435407
NA IL1522 Transcriptional regulator, MarR familychromosome CDS1635322 480 + 0.46875
NA IL2006 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS2146201 633 - 0.486572
NA IL1603 Predicted transcriptional regulator, rrf2 familychromosome CDS1719903 417 + 0.414868
NA IL2084 Predicted transcriptional regulator, HTH-typechromosome CDS2216435 321 - 0.504673
NA IL2297 4-Hydroxybutyrate CoA-transferase (N-terminal) fused to acetyltransferase (C-terminal) domain of GNAT superfamilychromosome CDS2461190 1842 + 0.486428
NA IL0402 Transcriptional regulator, TetR familychromosome CDS419854 576 + 0.473958
NA IL0155 Response regulator, LuxR family (CheY-HTH)chromosome CDS164558 645 + 0.431008
NA IL0853 Predicted acetyltransferase, GNAT familychromosome CDS909525 681 - 0.465492
NA IL0408 Predicted transcriptional regulator, BolA superfamilychromosome CDS423580 255 + 0.443137
NA IL0081 Transcriptional regulator, MarR familychromosome CDS87391 456 - 0.497807
NA IL0056 Membrane associated protein containing xre-family DNA-binding HTH domainchromosome CDS58709 411 - 0.394161
NA IL1816 Acetyltransferase, GNAT familychromosome CDS1949119 450 - 0.455556
NA IL1637 Transcriptional regulator, MerR familychromosome CDS1750806 420 + 0.364286
NA IL1164 Predicted regulatory protein containing AraC-type DNA-binding domain and DSBH domainchromosome CDS1243632 924 + 0.465368
NA IL1607 Predicted DNA-binding protein, possible transcriptional regulatorchromosome CDS1723412 828 + 0.522947
NA IL0641 Hypothetical proteinchromosome CDS694889 975 - 0.427692
NA IL0169 Transcriptional regulator, ArsR familychromosome CDS180270 312 - 0.442308
NA IL2481 Transcriptional regulator, Lpr familychromosome CDS2657241 444 + 0.466216
NA IL0484 Acetyltransferase, GNAT familychromosome CDS509862 570 - 0.526316
NA IL0296 Response regulator of the LytR/AlgR familychromosome CDS308386 723 + 0.484094
NA IL2190 Transcriptional regulator, LysR familychromosome CDS2340006 927 - 0.477886
NA IL0303 Transcriptional regulator, PaiB homologchromosome CDS314454 627 + 0.460925
NA IL2079 Protein containing acetyltransferase (GNAT family) domainchromosome CDS2213458 744 + 0.486559
acrR IL2441 AcrAB operon repressorchromosome CDS2615413 615 + 0.439024
alpA IL0639 prophage CP4-57 regulatory protein-like proteinchromosome CDS694156 207 + 0.434783
araC IL0098 AraC-type DNA-binding domainchromosome CDS101703 579 - 0.507772
arcA IL0491 Response regulator (CheY,wHTH domains)chromosome CDS516075 660 - 0.478788
argR IL0471 Arginine repressorchromosome CDS496851 474 - 0.491561
asnC IL0694 Probable regulator for asnA, asnC and gidA, lpr familychromosome CDS748234 471 + 0.437367
bvg IL2002 Predicted transcriptional regulatorchromosome CDS2139966 789 - 0.485425
cpxR IL2434 Response regulator (CheY,wHTH domains)chromosome CDS2607351 681 - 0.475771
cspD IL0676 Cold shock proteinchromosome CDS731105 216 + 0.476852
cspE IL2493 Cold shock proteinchromosome CDS2672527 210 - 0.461905
cysB IL1709 Probable positive transcriptional regulator for cysteine regulonchromosome CDS1840961 975 - 0.462564
dbpA IL1413 ATP-dependent RNA helicasechromosome CDS1516437 1425 + 0.45614
dcm IL2528 DNA cytosine methylasechromosome CDS2703805 1260 + 0.430159
deaD IL1991 ATP-dependent RNA helicasechromosome CDS2124009 1785 - 0.487955
dinG IL1832 ATP-dependent DNA helicasechromosome CDS1964016 1953 - 0.509473
fadR_1 IL0306 Transcriptional regulator, FadR familychromosome CDS317046 732 - 0.478142
fadR_2 IL1821 Negative regulator for fad regulonchromosome CDS1955418 711 - 0.523207
farR IL2452 Transcriptional regulator of succinylCoA synthetase operonchromosome CDS2624299 702 - 0.502849
fecI IL1594 DNA-directed RNA polymerase specialized sigma subunitchromosome CDS1708919 591 - 0.51269
fis IL2289 Factor for inversion stimulation Fis, transcriptional activatorchromosome CDS2452212 294 + 0.462585
flgM IL1151 Negative regulator of flagellin synthesischromosome CDS1230915 324 + 0.459877
fliA IL1117 DNA-directed RNA polymerase specialized sigma 28 subunitchromosome CDS1198046 726 - 0.46281
glpR IL2593 Probable repressor of the glycerol-3-phosphate regulonchromosome CDS2788077 705 - 0.451064
greA IL0979 Transcription elongation factor GreAchromosome CDS1033433 477 - 0.412998
greB IL0282 GreBchromosome CDS297874 480 - 0.510417
hepA IL2223 Probable ATP-dependent RNA helicase HepAchromosome CDS2375711 2661 + 0.517475
hipB IL0058 Transcriptional regulator, HipB orthologchromosome CDS59992 273 + 0.47619
kdpE IL1660 Response regulator (CheY, wHTH domains)chromosome CDS1776955 714 + 0.508403
kdtA IL1987 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS2119021 1986 - 0.474824
lexA IL0262 SOS-response transcriptional repressorchromosome CDS275539 618 - 0.485437
lrp IL0668 Lrpchromosome CDS723670 492 - 0.463415
merR IL1643 Transcriptional regulator MerRchromosome CDS1758757 444 - 0.515766
metJ IL2465 Transcriptional regulator of met regulon (repressor)chromosome CDS2640034 324 - 0.472222
mfd IL1520 Transcription-repair coupling factor, superfamily II helicasechromosome CDS1630709 3483 + 0.492392
narL IL0182 Nitrate/nitrite response regulator (CheY, HTH domain)chromosome CDS195517 660 - 0.489394
nhaR IL0523 Possible transcriptional activator of LysR familychromosome CDS549011 867 - 0.535179
norR IL0196 Nitric oxide reductase regulatorchromosome CDS212472 1545 - 0.516505
nusA IL0969 Transcription elongation factor NusAchromosome CDS1023927 1500 - 0.465333
nusB IL2141 Transcription termination factor NusBchromosome CDS2279186 420 - 0.471429
nusG IL0340 Transcription antiterminator NusGchromosome CDS350414 540 + 0.468519
ompR IL0320 Response regulator (CheY, wHTH domains)chromosome CDS329364 726 + 0.523416
oxyR IL2577 Transcriptional regulator of lysR familychromosome CDS2768451 915 + 0.49071
parB IL2627 Chromosome partitioning protein ParBchromosome CDS2827104 876 - 0.469178
pdhR IL0457 Probable transcriptional regulator for pyruvate dehydrogenase complexchromosome CDS471818 684 + 0.491228
phoB IL2111 Positive response regulator for pho regulon (CheY-wHTH)chromosome CDS2248260 687 - 0.480349
pspA IL0731 Phage shock protein Achromosome CDS788222 675 - 0.451852
pspC IL0729 Putative stress-responsive transcriptional regulatorchromosome CDS787584 384 - 0.440104
pspF IL0732 Transcriptional regulator, AtoC family (AAA,HTH domains)chromosome CDS789087 1077 + 0.457753
qseB_1 IL0095 Response regulator (CheY,wHTH domains)chromosome CDS99109 663 + 0.509804
recG IL2374 DNA helicase RecJchromosome CDS2544023 2082 - 0.532661
relA IL0804 (p)ppGpp synthetase IIchromosome CDS860857 2190 - 0.519178
rfaH IL0590 Transcription antiterminator RfaHchromosome CDS632681 498 - 0.475904
rhaR IL2484 Positive regulator for rhaRS operon, AraC familychromosome CDS2660674 1032 - 0.459302
rhlB IL2363 ATP-dependent RNA helicasechromosome CDS2533858 1278 + 0.5
rhlE IL1546 ATP-dependent RNA helicasechromosome CDS1664644 1251 + 0.478018
rho IL2361 Transcription termination factor rhochromosome CDS2531922 1269 - 0.481481
rnc IL0810 Rnase III, dsRNA-specific ribonucleasechromosome CDS867199 690 - 0.484058
rnk IL0629 Transcription elongation factor family proteinchromosome CDS686333 390 + 0.428205
rpoA IL1891 DNA-directed RNA polymerase alpha subunitchromosome CDS2030875 990 - 0.482828
rpoB IL0345 DNA-directed RNA polymerase beta subunitchromosome CDS353652 4029 + 0.469347
rpoC IL0346 DNA-directed RNA polymerase beta' subunitchromosome CDS357753 4236 + 0.465061
rpoD IL2200 DNA-directed RNA polymerase sigma 70 subunitchromosome CDS2349877 1830 - 0.466667
rpoE IL0816 DNA-directed RNA polymerase specialized sigma E subunitchromosome CDS872743 579 - 0.462867
rpoH IL0229 DNA-directed RNA polymerase sigma 32 subunitchromosome CDS247956 861 + 0.472706
rpoN IL0396 DNA-directed RNA polymerase specialized sigma 54/60 subunitchromosome CDS414886 1461 - 0.473648
rpoS IL0745 DNA-directed RNA polymerase sigma 38 subunitchromosome CDS805779 969 - 0.480908
rpoZ IL2381 DNA-directed RNA polymerase omega subunitchromosome CDS2553700 270 - 0.455556
rsd IL2308 Regulator of sigma Dchromosome CDS2475100 477 + 0.427673
sIR2 IL1566 SIR2-like regulatory protein, NAD-dependent protein deacetylasechromosome CDS1678955 777 + 0.530245
soxR_1 IL0631 Transcriptional regulator, MerR familychromosome CDS688506 408 - 0.553922
soxR_2 IL0801 Transcriptional regulator, MerR familychromosome CDS859045 396 - 0.482323
soxR_3 IL0873 Transcriptional regulator, MerR familychromosome CDS930556 420 + 0.464286
soxR_4 IL1243 Transcriptional regulator, MerR familychromosome CDS1335433 408 + 0.553922
spoT IL2380 (p)ppGpp synthetase Ichromosome CDS2551492 2106 - 0.491928
srmB IL2131 ATP-dependent RNA helicasechromosome CDS2269668 1230 + 0.495935
tex IL0281 Transcriptional accessory proteinchromosome CDS295480 2331 - 0.521236
ttk IL0237 Transcriptional regulator, TetR familychromosome CDS254646 591 - 0.472081
tyrR IL0723 Transcriptional regulator of aromatic amino acids metabolismchromosome CDS780973 1581 - 0.480708
uvrY IL0654 Response regulator, LuxR family (CheY, HTH domains)chromosome CDS711878 651 - 0.466974
vacB IL1943 Exoribonuclease Rchromosome CDS2066352 2310 - 0.463636