Gene list
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COG category: Transcription
Organism: Clostridium acetobutylicum ATCC 824, ATCC 824
Number of genes found: 339
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| Clostridium acetobutylicum ATCC 824, ATCC 824 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| CAC0019 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 27017 | 606 | - | 0.282178 | |
| CAC0023 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 33214 | 900 | + | 0.306667 | |
| CAC0032 | Transcriptional regulator TetR/AcrR family | SubName: Full=Transcriptional regulator TetR/AcrR family; | chromosome | CDS | 42932 | 570 | + | 0.310526 | |
| CAC0078 | Accessory gene regulator protein B | RecName: Full=Putative AgrB-like protein; EC=3.4.-.-; | chromosome | CDS | 86728 | 630 | + | 0.280952 | |
| CAC0081 | Accessory gene regulator protein A | SubName: Full=Accessory gene regulator protein A; | chromosome | CDS | 88953 | 726 | + | 0.264463 | |
| CAC0093 | Transcriptional regulators, LysR family | SubName: Full=Transcriptional regulators, LysR family; | chromosome | CDS | 101128 | 873 | - | 0.280641 | |
| CAC0113 | Transcriptional regulator of sugar metabolism | SubName: Full=Transcriptional regulator of sugar metabolism; | chromosome | CDS | 124089 | 762 | + | 0.296588 | |
| CAC0115 | Uncharacterized protein, Yje/RRF2 family | SubName: Full=Uncharacterized protein, Yje/RRF2 family; | chromosome | CDS | 125487 | 414 | + | 0.330918 | |
| CAC0155 | Putative regulator of the PTS system for mannitol (gene MltR) | SubName: Full=Putative regulator of the PTS system for mannitol (Gene MltR); | chromosome | CDS | 175951 | 2055 | + | 0.265207 | |
| CAC0160 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 182984 | 450 | + | 0.3 | |
| CAC0162 | Transcriptional regulator MarR/EmrR family | SubName: Full=Transcriptional regulator MarR/EmrR family; | chromosome | CDS | 185565 | 474 | - | 0.324895 | |
| CAC0174 | Response regulator, CheY-like receiver domain and HTH DNA-binding domain | SubName: Full=Response regulator, CheY-like receiver domain and HTH DNA-binding domain; | chromosome | CDS | 197025 | 642 | - | 0.294393 | |
| CAC0184 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 208566 | 963 | + | 0.310488 | |
| CAC0186 | Xre family DNA-binding domain and TPR-repeat-containing protein | SubName: Full=Xre family DNA-binding domain and TPR-repeat-containing protein; | chromosome | CDS | 210917 | 1305 | - | 0.27433 | |
| CAC0189 | Similar to transcriptional regulator, GntR family | SubName: Full=Similar to transcriptional regulator, GntR family; | chromosome | CDS | 214335 | 732 | - | 0.321038 | |
| CAC0191 | Transcriptional regulator, RpiR family | RecName: Full=Uncharacterized HTH-type transcriptional regulator CA_C0191; | chromosome | CDS | 216117 | 852 | + | 0.335681 | |
| CAC0195 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 221433 | 348 | - | 0.324713 | |
| CAC0197 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 223143 | 423 | + | 0.340426 | |
| CAC0201 | Transcriptional regulators, AcrR family | SubName: Full=Transcriptional regulators, AcrR family; | chromosome | CDS | 225955 | 585 | - | 0.28547 | |
| CAC0212 | Biotin-(acetyl-CoA carboxylase) ligase | SubName: Full=Biotin-(Acetyl-CoA carboxylase) ligase; | chromosome | CDS | 237128 | 810 | + | 0.324691 | |
| CAC0224 | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH DNA-binding domain); | chromosome | CDS | 248980 | 672 | + | 0.275298 | |
| CAC0231 | Transcripcional regulator of sugar metabolism | SubName: Full=Transcripcional regulator of sugar metabolism; | chromosome | CDS | 262569 | 765 | + | 0.317647 | |
| CAC0240 | Response regulator (CheY-like recever domain and HTH DNA-binding domain) | SubName: Full=Response regulator (CheY-like recever domain and HTH DNA-binding domain); | chromosome | CDS | 271300 | 627 | + | 0.301435 | |
| CAC0265 | Transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 297523 | 366 | + | 0.289617 | |
| CAC0284 | Transcriptional regulatory protein, Sir2 family | RecName: Full=NAD-dependent protein deacetylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; | chromosome | CDS | 323841 | 738 | + | 0.307588 | |
| CAC0289 | Response regulator (CheY domain, HTH domain) | SubName: Full=Response regulator (CheY domain, HTH domain); | chromosome | CDS | 328308 | 708 | + | 0.29096 | |
| CAC0310 | Regulators of stationary/sporulation gene expression, abrB B.subtilis ortholog | SubName: Full=Regulators of stationary/sporulation gene expression, abrB B.subtilis ortholog; | chromosome | CDS | 363819 | 246 | - | 0.304878 | |
| CAC0313 | Phage shock protein A | SubName: Full=Phage shock protein A; | chromosome | CDS | 366858 | 657 | - | 0.30137 | |
| CAC0321 | Response regulator (CheY-like domain, HTH domain) | SubName: Full=Response regulator (CheY-like domain, HTH domain); | chromosome | CDS | 375646 | 693 | + | 0.320346 | |
| CAC0324 | TPR repeats containing protein | SubName: Full=TPR repeats containing protein; | chromosome | CDS | 380405 | 1308 | - | 0.272171 | |
| CAC0360 | Transcriptional regulator, LacI family (HTH lacI domain), B.subtilis degA ortholog | SubName: Full=Transcriptional regulator, LacI family (HTH lacI domain), B.subtilis degA ortholog; | chromosome | CDS | 419727 | 987 | + | 0.329281 | |
| CAC0371 | Response regulator (CheY-like domain and HTH domain) | SubName: Full=Response regulator (CheY-like domain and HTH domain); | chromosome | CDS | 433681 | 687 | + | 0.30131 | |
| CAC0379 | Transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 441794 | 651 | + | 0.30722 | |
| CAC0382 | Possible transcriptional regulator of levanase operon, AAA-ATPase domain (NtrC family), fused to 2 BglG-like domains, ortholog of B.subtilis levR | SubName: Full=Possible transcriptional regulator of levanase operon, AAA-ATPase domain (NtrC family), fused to 2 BglG-like domains, ortholog of B.subtilis levR; | chromosome | CDS | 444719 | 2691 | - | 0.30249 | |
| CAC0393 | KDG operon repressor (gene kdgR), LacI family | SubName: Full=KDG operon repressor (Gene kdgR), LacI family; | chromosome | CDS | 457385 | 1035 | + | 0.329469 | |
| CAC0404 | Serine/threonine protein kinase fused to TPR repeats domain | SubName: Full=Serine/threonine protein kinase fused to TPR repeats domain; | chromosome | CDS | 467702 | 1974 | + | 0.306991 | |
| CAC0422 | Transcriptional antiterminator licT | SubName: Full=Transcriptional antiterminator licT; | chromosome | CDS | 488038 | 849 | + | 0.281508 | |
| CAC0432 | Methyl-accepting chemotaxis protein | SubName: Full=Methyl-accepting chemotaxis protein; | chromosome | CDS | 499814 | 1014 | + | 0.356016 | |
| CAC0450 | Response regulator (CheY-like and HTH domains) | SubName: Full=Response regulator (CheY-like and HTH domains); | chromosome | CDS | 517926 | 684 | + | 0.30848 | |
| CAC0457 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 527481 | 564 | - | 0.267731 | |
| CAC0459 | NtrC family transcriptional regulator (PAS and AAA domains) | SubName: Full=NtrC family transcriptional regulator (PAS and AAA domains); | chromosome | CDS | 529651 | 1884 | - | 0.328556 | |
| CAC0461 | Mercuric resistance operon regulatory protein, MerR family | SubName: Full=Mercuric resistance operon regulatory protein, MerR family; | chromosome | CDS | 533100 | 399 | + | 0.26817 | |
| CAC0465 | Predicted transcriptional regulator, dicA/hipB/ansR family | SubName: Full=Predicted transcriptional regulator, dicA/hipB/ansR family; | chromosome | CDS | 536448 | 792 | - | 0.270202 | |
| CAC0493 | Uncharcterized small conserved protein, YhhG family | SubName: Full=Uncharcterized small conserved protein, YhhG family; | chromosome | CDS | 567127 | 321 | + | 0.299065 | |
| CAC0514 | CBS domain, similar to B.subtilis ytoI | SubName: Full=CBS domain, similar to B.subtilis ytoI; | chromosome | CDS | 590854 | 1305 | + | 0.321073 | |
| CAC0524 | Response regulator (CheY-like and HTH domains) | SubName: Full=Response regulator (CheY-like and HTH domains); | chromosome | CDS | 604412 | 687 | + | 0.407569 | |
| CAC0531 | Transcriptional regulator, RpiR family | SubName: Full=Transcriptional regulator, RpiR family; | chromosome | CDS | 614278 | 774 | + | 0.293282 | |
| CAC0549 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 637029 | 423 | - | 0.300236 | |
| CAC0550 | Possible sigma factor | SubName: Full=Possible sigma factor; | chromosome | CDS | 637686 | 429 | + | 0.277389 | |
| CAC0559 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 646645 | 444 | + | 0.297297 | |
| CAC0564 | Response regulator (REC, HTH domains) | SubName: Full=Response regulator (REC, HTH domains); | chromosome | CDS | 652910 | 702 | + | 0.309117 | |
| CAC0569 | SACPA operon antiterminator (sacT) | SubName: Full=SACPA operon antiterminator (SacT); | chromosome | CDS | 658307 | 825 | + | 0.282424 | |
| CAC0571 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 661465 | 324 | + | 0.345679 | |
| CAC0585 | N-terminal CheY reciever domain fused to C-terminal uncharacterized CheX-like domain | SubName: Full=N-terminal CheY reciever domain fused to C-terminal uncharacterized CheX-like domain; | chromosome | CDS | 678868 | 876 | + | 0.311644 | |
| CAC0599 | Transcriptional regulator, GntR family | SubName: Full=Transcriptional regulator, GntR family; | chromosome | CDS | 691644 | 378 | + | 0.31746 | |
| CAC0627 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 729593 | 435 | + | 0.278161 | |
| CAC0653 | Response regulator (CheY-like receiver domain and HTH DNA binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH DNA binding domain); | chromosome | CDS | 758945 | 666 | + | 0.307808 | |
| CAC0693 | Transcriptional regulator of the LacI family | SubName: Full=Transcriptional regulator of the LacI family; | chromosome | CDS | 800592 | 1005 | + | 0.297512 | |
| CAC0707 | RNA polymerase sigma-54 factor | SubName: Full=RNA polymerase sigma-54 factor; | chromosome | CDS | 818506 | 1395 | + | 0.293907 | |
| CAC0708 | Putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 820041 | 1035 | + | 0.329469 | |
| CAC0715 | FUSION ribonuclease and ribosomal protein S1 domain | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 828112 | 2193 | + | 0.331509 | |
| CAC0723 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 838031 | 558 | + | 0.277778 | |
| CAC0724 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 838789 | 558 | - | 0.277778 | |
| CAC0745 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 865592 | 882 | + | 0.340136 | |
| CAC0759 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 881870 | 627 | + | 0.30622 | |
| CAC0763 | Transcriptional regulator, MarR family | SubName: Full=Transcriptional regulator, MarR family; | chromosome | CDS | 885087 | 474 | - | 0.316456 | |
| CAC0766 | Predicted transcriptional regulator (MerR family) | SubName: Full=Predicted transcriptional regulator (MerR family); | chromosome | CDS | 888738 | 381 | + | 0.291339 | |
| CAC0768 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 890480 | 891 | + | 0.315376 | |
| CAC0778 | ATP-dependent RNA helicase, superfamily II | SubName: Full=ATP-dependent RNA helicase, superfamily II; | chromosome | CDS | 900231 | 1758 | + | 0.319113 | |
| CAC0784 | ATP-dependent RNA helicase, superfamily II | SubName: Full=ATP-dependent RNA helicase, superfamily II; | chromosome | CDS | 906689 | 1125 | - | 0.344 | |
| CAC0807 | Cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 933945 | 198 | + | 0.328283 | |
| CAC0821 | Transcriptional regulator (TetR/AcrR family) | SubName: Full=Transcriptional regulator (TetR/AcrR family); | chromosome | CDS | 950070 | 603 | + | 0.281924 | |
| CAC0830 | Response regulator | SubName: Full=Response regulator; | chromosome | CDS | 961417 | 690 | + | 0.278261 | |
| CAC0832 | Fusion: transcriptional regulator and conserved domain | SubName: Full=Fusion: transcriptional regulator and conserved domain; | chromosome | CDS | 963263 | 723 | + | 0.293223 | |
| CAC0841 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 971103 | 540 | - | 0.335185 | |
| CAC0844 | Barstar-like protein ribonuclease (barnase) inhibitor | SubName: Full=Barstar-like protein ribonuclease (Barnase) inhibitor; | chromosome | CDS | 973115 | 276 | + | 0.300725 | |
| CAC0846 | Hypothetical protein, CF-29 family | SubName: Full=Uncharacterized protein; | chromosome | CDS | 974296 | 255 | + | 0.286275 | |
| CAC0849 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 977746 | 309 | - | 0.339806 | |
| CAC0856 | Transcriptional regulator, LacI family (probably maltose operon transcriptional repressor) | SubName: Full=Transcriptional regulator, LacI family (Probably maltose operon transcriptional repressor); | chromosome | CDS | 985886 | 1041 | + | 0.329491 | |
| CAC0860 | Two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 990196 | 696 | + | 0.313218 | |
| CAC0865 | Two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 994813 | 657 | + | 0.29376 | |
| CAC0876 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 1006310 | 456 | + | 0.291667 | |
| CAC0933 | Transcriptional regulator of NagC/XylR family (xylose repressor) | SubName: Full=Transcriptional regulator of NagC/XylR family (Xylose repressor); | chromosome | CDS | 1074641 | 1128 | + | 0.29078 | |
| CAC0949 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1088983 | 447 | + | 0.295302 | |
| CAC0957 | Xre family DNA-binding domain and TPR-repeat-containing protein | SubName: Full=Xre family DNA-binding domain and TPR-repeat-containing protein; | chromosome | CDS | 1094974 | 1305 | + | 0.28046 | |
| CAC0958 | Xre family DNA-binding domain and TPR-repeat-containing protein | SubName: Full=Xre family DNA-binding domain and TPR-repeat-containing protein; | chromosome | CDS | 1096298 | 1266 | + | 0.274092 | |
| CAC0977 | Transcriptional regulator, Lrp family | SubName: Full=Transcriptional regulator, Lrp family; | chromosome | CDS | 1125412 | 468 | - | 0.318376 | |
| CAC1007 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 1154993 | 525 | - | 0.310476 | |
| CAC1032 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1184134 | 261 | + | 0.344828 | |
| CAC1043 | Xre family DNA-binding domain and TPR-repeat containing protein | SubName: Full=Xre family DNA-binding domain and TPR-repeat containing protein; | chromosome | CDS | 1193798 | 1305 | + | 0.25364 | |
| CAC1046 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1199004 | 912 | + | 0.297149 | |
| CAC1070 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 1222444 | 417 | - | 0.263789 | |
| CAC1071 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 1222894 | 105 | - | 0.27619 | |
| CAC1086 | Transcriptional regulators of NagC/XylR family | SubName: Full=Transcriptional regulators of NagC/XylR family; | chromosome | CDS | 1254775 | 879 | + | 0.324232 | |
| CAC1153 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1318341 | 252 | + | 0.222222 | |
| CAC1214 | Xre family DNA-binding domain and TPR-repeat containing protein | SubName: Full=Xre family DNA-binding domain and TPR-repeat containing protein; | chromosome | CDS | 1358390 | 1305 | + | 0.257471 | |
| CAC1226 | RNA polymerase sigma factor | SubName: Full=RNA polymerase sigma factor; | chromosome | CDS | 1369553 | 684 | + | 0.266082 | |
| CAC1237 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1379038 | 498 | + | 0.271084 | |
| CAC1264 | Membrane bound transcriptional regulator of LytR family | SubName: Full=Membrane bound transcriptional regulator of LytR family; | chromosome | CDS | 1406844 | 1215 | + | 0.283128 | |
| CAC1280 | Transcriptional regulator of heat shock genes, HrcA | RecName: Full=Heat-inducible transcription repressor HrcA; | chromosome | CDS | 1423874 | 1032 | + | 0.299419 | |
| CAC1300 | RNA polymerase sigma factor RPOD | RecName: Full=RNA polymerase sigma factor SigA; AltName: Full=Major vegetative sigma factor; AltName: Full=Sigma-A; | chromosome | CDS | 1443616 | 1137 | + | 0.351803 | |
| CAC1320 | Glycerol-3-phosphate responsive antiterminator (mRNA-binding), GLPP | SubName: Full=Glycerol-3-phosphate responsive antiterminator (MRNA-binding), GLPP; | chromosome | CDS | 1460835 | 558 | + | 0.297491 | |
| CAC1333 | AraC-type sugar metabolism regulator | SubName: Full=AraC-type sugar metabolism regulator; | chromosome | CDS | 1472745 | 861 | + | 0.263647 | |
| CAC1340 | Transcriptional regulator of the LacI family | SubName: Full=Transcriptional regulator of the LacI family; | chromosome | CDS | 1478746 | 1089 | - | 0.311295 | |
| CAC1355 | Transcriptional antiterminator (BglG family) | SubName: Full=Transcriptional antiterminator (BglG family); | chromosome | CDS | 1500207 | 864 | - | 0.275463 | |
| CAC1404 | Transcriptional regulator of sugar metabolism (deoR family) | SubName: Full=Transcriptional regulator of sugar metabolism (DeoR family); | chromosome | CDS | 1547695 | 738 | + | 0.308943 | |
| CAC1406 | Transcriptional antiterminator (BglG family) | SubName: Full=Transcriptional antiterminator (BglG family); | chromosome | CDS | 1550310 | 834 | + | 0.284173 | |
| CAC1416 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 1561646 | 516 | + | 0.310078 | |
| CAC1430 | Transcriptional regulators of sugar metabolism (deoR family) | SubName: Full=Transcriptional regulators of sugar metabolism (DeoR family); | chromosome | CDS | 1574943 | 741 | + | 0.318489 | |
| CAC1451 | AraC-type DNA-binding domain-containing protein | SubName: Full=AraC-type DNA-binding domain-containing protein; | chromosome | CDS | 1599152 | 888 | - | 0.27027 | |
| CAC1455 | Two-component system regulator (CheY domain and HTH-like DNA-binding domain) | SubName: Full=Two-component system regulator (CheY domain and HTH-like DNA-binding domain); | chromosome | CDS | 1604046 | 678 | + | 0.315634 | |
| CAC1463 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1613206 | 168 | + | 0.309524 | |
| CAC1465 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 1615920 | 420 | + | 0.280952 | |
| CAC1467 | Transcriptional regulator, Lrp family | SubName: Full=Transcriptional regulator, Lrp family; | chromosome | CDS | 1616961 | 450 | + | 0.266667 | |
| CAC1468 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 1617414 | 429 | + | 0.277389 | |
| CAC1469 | Iron-dependent transcription repressor | SubName: Full=Iron-dependent transcription repressor; | chromosome | CDS | 1617889 | 369 | + | 0.298103 | |
| CAC1481 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 1628817 | 879 | - | 0.29124 | |
| CAC1483 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1630694 | 327 | - | 0.321101 | |
| CAC1506 | Response regulator (CheY-like receiver domain and a HTH) | SubName: Full=PhoP; SubName: Full=Response regulator (CheY-like receiver domain and a HTH); | chromosome | CDS | 1650171 | 654 | + | 0.299694 | |
| CAC1509 | Specialized sigma subunit of RNA polymerase | SubName: Full=SigX; SubName: Full=Specialized sigma subunit of RNA polymerase; | chromosome | CDS | 1652951 | 555 | + | 0.295496 | |
| CAC1516 | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH DNA-binding domain); | chromosome | CDS | 1658951 | 690 | + | 0.304348 | |
| CAC1523 | Fructokinase | SubName: Full=Fructokinase; | chromosome | CDS | 1665236 | 867 | + | 0.351788 | |
| CAC1536 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 1680316 | 645 | - | 0.293023 | |
| CAC1552 | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH DNA-binding domain); | chromosome | CDS | 1694562 | 684 | + | 0.30848 | |
| CAC1559 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1703698 | 357 | - | 0.29972 | |
| CAC1569 | Transcriptional regulators, MarR/EmrR family | SubName: Full=Transcriptional regulators, MarR/EmrR family; | chromosome | CDS | 1714214 | 432 | - | 0.282407 | |
| CAC1578 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 1722226 | 333 | - | 0.27027 | |
| CAC1581 | Response regulator (CheY-like receiver domain and HTH DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH DNA-binding domain); | chromosome | CDS | 1724906 | 705 | + | 0.256738 | |
| CAC1588 | Malolactic regulator, LysR family | SubName: Full=Malolactic regulator, LysR family; | chromosome | CDS | 1731290 | 882 | - | 0.291383 | |
| CAC1668 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 1811180 | 588 | + | 0.284014 | |
| CAC1670 | Response regulator (CheY-like receiver domain and DNA-binding HTH domain) | SubName: Full=Response regulator (CheY-like receiver domain and DNA-binding HTH domain); | chromosome | CDS | 1814010 | 762 | + | 0.259843 | |
| CAC1672 | Rad3-related DNA helicase | SubName: Full=Rad3-related DNA helicase; | chromosome | CDS | 1816050 | 2376 | + | 0.309764 | |
| CAC1675 | Predicted transcriptional regulator (HTH winged helix type) | SubName: Full=Predicted transcriptional regulator (HTH winged helix type); | chromosome | CDS | 1824704 | 420 | + | 0.335714 | |
| CAC1689 | DNA-dependent RNA polymerase sigma subunit | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 1839816 | 705 | + | 0.314894 | |
| CAC1695 | DNA-dependent RNA polymerase sigma subunit | RecName: Full=RNA polymerase sigma-E factor; AltName: Full=Stage II sporulation protein GB; | chromosome | CDS | 1846829 | 708 | + | 0.306497 | |
| CAC1696 | Specialized DNA-dependent RNA polymerase sigma subunit | RecName: Full=RNA polymerase sigma-G factor; | chromosome | CDS | 1847610 | 774 | + | 0.329457 | |
| CAC1698 | Uncharacterized conserved protein, YTCG B.subtilis ortholog | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 1848907 | 456 | + | 0.311404 | |
| CAC1700 | Response regulator (CheY-like receiver domain and DNA-binding HTH domain) | SubName: Full=Response regulator (CheY-like receiver domain and DNA-binding HTH domain); | chromosome | CDS | 1850364 | 699 | + | 0.340486 | |
| CAC1719 | RNA polymerase-associated protein RpoZ, omega subunit (YLOH B.subtilis ortholog) | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 1867885 | 219 | + | 0.324201 | |
| CAC1736 | RecG helicase | SubName: Full=RecG helicase; | chromosome | CDS | 1883855 | 2037 | + | 0.308297 | |
| CAC1748 | DsRNA-specific ribonuclease III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 1894870 | 693 | + | 0.350649 | |
| CAC1749 | BioB/LipA-like protein | SubName: Full=BioB/LipA-like protein; | chromosome | CDS | 1895563 | 1077 | + | 0.312906 | |
| CAC1766 | Predicted sigma factor | SubName: Full=Predicted sigma factor; | chromosome | CDS | 1911395 | 558 | + | 0.272401 | |
| CAC1770 | RNA polymerase sigma factor, SigK-like | SubName: Full=RNA polymerase sigma factor, SigK-like; | chromosome | CDS | 1915404 | 702 | + | 0.276353 | |
| CAC1771 | Uncharacterized protein, ykrI B.subtilis homolog | SubName: Full=Uncharacterized protein, ykrI B.subtilis homolog; | chromosome | CDS | 1916116 | 744 | + | 0.228495 | |
| CAC1786 | Transcriptional regulator, CodY B.subtilis ortholog | RecName: Full=GTP-sensing transcriptional pleiotropic repressor CodY; | chromosome | CDS | 1936387 | 777 | + | 0.292149 | |
| CAC1793 | P-loop ATPase domain fused to LexA-like protein | SubName: Full=P-loop ATPase domain fused to LexA-like protein; | chromosome | CDS | 1942117 | 1443 | + | 0.279972 | |
| CAC1799 | Transcription terminator NusA | SubName: Full=Transcription terminator NusA; | chromosome | CDS | 1948646 | 1062 | + | 0.319209 | |
| CAC1800 | Uncharacterized conserved protein, YLXR B.subtilis homolog | SubName: Full=Uncharacterized conserved protein, YLXR B.subtilis homolog; | chromosome | CDS | 1949748 | 267 | + | 0.307116 | |
| CAC1832 | SOS regulatory protein LexA | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 1983311 | 615 | + | 0.325203 | |
| CAC1843 | Predicted transcriptional regulator, YDCN B.subtilis ortholog | SubName: Full=Predicted transcriptional regulator, YDCN B.subtilis ortholog; | chromosome | CDS | 1995661 | 360 | + | 0.291667 | |
| CAC1850 | Transcriptional regulators, RpiR family | SubName: Full=Transcriptional regulators, RpiR family; | chromosome | CDS | 2002701 | 882 | - | 0.304989 | |
| CAC1867 | Transcriptional regulator (phage-related) (Xre family) | SubName: Full=Transcriptional regulator (Phage-related) (Xre family); | chromosome | CDS | 2016380 | 276 | + | 0.289855 | |
| CAC1869 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 2017471 | 204 | + | 0.29902 | |
| CAC1913 | Zn-finger containing protein | SubName: Full=Zn-finger containing protein; | chromosome | CDS | 2051108 | 219 | - | 0.292237 | |
| CAC1941 | Transcription regulator AbrB | SubName: Full=Transcription regulator AbrB; | chromosome | CDS | 2062295 | 240 | - | 0.3375 | |
| CAC1945 | Phage related anti-repressor protein | SubName: Full=Phage related anti-repressor protein; | chromosome | CDS | 2064029 | 735 | - | 0.30068 | |
| CAC1946 | Phage related transcriptional regulator (Xre family) | SubName: Full=Phage related transcriptional regulator (Xre family); | chromosome | CDS | 2065030 | 285 | - | 0.329825 | |
| CAC1947 | Phage related transcriptional regulator (Xre family) | SubName: Full=Phage related transcriptional regulator (Xre family); | chromosome | CDS | 2065522 | 372 | + | 0.284946 | |
| CAC1950 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2067822 | 213 | + | 0.248826 | |
| CAC1965 | Transcription elongation factor GreA | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 2081513 | 477 | - | 0.310273 | |
| CAC2052 | DNA-dependent RNA polymerase sigma subunit | SubName: Full=DNA-dependent RNA polymerase sigma subunit; | chromosome | CDS | 2158772 | 714 | - | 0.268908 | |
| CAC2053 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2159469 | 591 | - | 0.262267 | |
| CAC2055 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 2160782 | 411 | + | 0.311436 | |
| CAC2060 | Predicted transciptinal regulator (HTH-type), YPUH B.subtilis ortholog | RecName: Full=Segregation and condensation protein B; | chromosome | CDS | 2164054 | 609 | - | 0.305419 | |
| CAC2071 | Spo0A protein, (CheY-like receiver domain and HTH-type DNA binding domain) | RecName: Full=Stage 0 sporulation protein A homolog; | chromosome | CDS | 2172521 | 846 | - | 0.312057 | |
| CAC2074 | Arginine repressor, argR | RecName: Full=Arginine repressor; | chromosome | CDS | 2176927 | 453 | - | 0.326711 | |
| CAC2084 | Transcription termination factor NusB | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 2185367 | 408 | - | 0.296569 | |
| CAC2111 | Fibronectin-binding protein | SubName: Full=Fibronectin-binding protein; | chromosome | CDS | 2203702 | 1713 | + | 0.283713 | |
| CAC2143 | Sigma factor of SigD/WhiG family | SubName: Full=Sigma factor of SigD/WhiG family; | chromosome | CDS | 2235085 | 726 | - | 0.312672 | |
| CAC2201 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2294589 | 348 | - | 0.301724 | |
| CAC2214 | Regulator of flagellin synthesis, FLGM | SubName: Full=Regulator of flagellin synthesis, FLGM; | chromosome | CDS | 2305566 | 282 | - | 0.297872 | |
| CAC2236 | Uncharacterized conserved protein of YjeB/RRF2 family | SubName: Full=Uncharacterized conserved protein of YjeB/RRF2 family; | chromosome | CDS | 2330121 | 444 | - | 0.304054 | |
| CAC2242 | Predicted transcriptional regulator, arsE family | SubName: Full=Predicted transcriptional regulator, arsE family; | chromosome | CDS | 2337364 | 369 | - | 0.303523 | |
| CAC2254 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 2353179 | 642 | + | 0.274143 | |
| CAC2259 | Predicted transcriptional regulator of MarR-family | SubName: Full=Predicted transcriptional regulator of MarR-family; | chromosome | CDS | 2358175 | 180 | - | 0.3 | |
| CAC2274 | RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolases | SubName: Full=RelA/SpoT protein, (P)ppGpp synthetase/pyrophosphohydrolases; | chromosome | CDS | 2376156 | 2223 | - | 0.328835 | |
| CAC2297 | Transcriptional regulator of MocR family (DNA-binding HTH domain and aminotransferase domain) | SubName: Full=Transcriptional regulator of MocR family (DNA-binding HTH domain and aminotransferase domain); | chromosome | CDS | 2399636 | 1404 | - | 0.276353 | |
| CAC2306 | Sporulation-specific sigma factor F | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 2409753 | 759 | - | 0.29776 | |
| CAC2319 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2422167 | 213 | - | 0.258216 | |
| CAC2385 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2493152 | 528 | + | 0.242424 | |
| CAC2394 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 2503193 | 861 | + | 0.318235 | |
| CAC2397 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2506022 | 717 | - | 0.266388 | |
| CAC2400 | Serine/threonine kinase related protein, inactivated (HRDL motif absent) (fragment) | SubName: Full=Serine/threonine kinase related protein, inactivated (HRDL motif absent); | chromosome | CDS | 2511267 | 534 | + | 0.290262 | |
| CAC2430 | Transcription elongation factor, greA | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 2546049 | 465 | + | 0.309677 | |
| CAC2435 | Response regulator (CheY-like domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY-like domain and HTH-type DNA-binding domain); | chromosome | CDS | 2552563 | 675 | - | 0.340741 | |
| CAC2451 | SoxR family transcriptional regulator fused to SAM-dependent methyltransferase | SubName: Full=SoxR family transcriptional regulator fused to SAM-dependent methyltransferase; | chromosome | CDS | 2568042 | 1041 | - | 0.278578 | |
| CAC2468 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2582421 | 423 | - | 0.314421 | |
| CAC2471 | Transcriptional regulator, TetR/AcrR family | SubName: Full=Transcriptional regulator, TetR/AcrR family; | chromosome | CDS | 2583780 | 450 | - | 0.34 | |
| CAC2473 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 2585196 | 237 | + | 0.295359 | |
| CAC2476 | Uncharacterized protein, homolog of Spirochaeta aurantia (gi:152901) | SubName: Full=Uncharacterized protein, homolog of Spirochaeta aurantia (Gi:152901); | chromosome | CDS | 2586521 | 345 | - | 0.318841 | |
| CAC2486 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 2595228 | 438 | - | 0.33105 | |
| CAC2490 | Xre family DNA-binding domain and TPR repeats containing protein | SubName: Full=Xre family DNA-binding domain and TPR repeats containing protein; | chromosome | CDS | 2597236 | 1305 | - | 0.281992 | |
| CAC2491 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2598885 | 468 | + | 0.301282 | |
| CAC2495 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 2601592 | 195 | - | 0.317949 | |
| CAC2509 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2617354 | 495 | - | 0.349495 | |
| CAC2529 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2637635 | 477 | - | 0.291405 | |
| CAC2530 | Predicted N-acetyltransferase | SubName: Full=Predicted N-acetyltransferase; | chromosome | CDS | 2638197 | 498 | - | 0.315261 | |
| CAC2539 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2647947 | 450 | - | 0.326667 | |
| CAC2546 | Transcriptional regulator, FadR family | SubName: Full=Transcriptional regulator, FadR family; | chromosome | CDS | 2653807 | 696 | - | 0.317529 | |
| CAC2552 | Predicted transcriptional regulator CRO family | SubName: Full=Predicted transcriptional regulator CRO family; | chromosome | CDS | 2660657 | 216 | - | 0.314815 | |
| CAC2560 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2665450 | 456 | - | 0.267544 | |
| CAC2568 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 2671095 | 354 | - | 0.336158 | |
| CAC2571 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2673404 | 504 | - | 0.333333 | |
| CAC2605 | Transcriptional regulator (TetR/AcrR family) | SubName: Full=Transcriptional regulator (TetR/AcrR family); | chromosome | CDS | 2708970 | 585 | + | 0.273504 | |
| CAC2608 | Trancriptional regulator of AraC family | SubName: Full=Trancriptional regulator of AraC family; | chromosome | CDS | 2711293 | 855 | + | 0.284211 | |
| CAC2613 | Transcriptional regulators of NagC/XylR family | SubName: Full=Transcriptional regulators of NagC/XylR family; | chromosome | CDS | 2717044 | 942 | - | 0.356688 | |
| CAC2616 | Predicted iron-dependent transcription repressor | SubName: Full=Predicted iron-dependent transcription repressor; | chromosome | CDS | 2719849 | 474 | + | 0.28481 | |
| CAC2659 | Putative stress-responsive transcriptional regulator PspC | SubName: Full=Putative stress-responsive transcriptional regulator PspC; | chromosome | CDS | 2772756 | 192 | - | 0.307292 | |
| CAC2690 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 2813051 | 816 | - | 0.306373 | |
| CAC2697 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2819666 | 978 | - | 0.250511 | |
| CAC2735 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding) | SubName: Full=Response regulator (CheY-like receiver domain and HTH-type DNA-binding); | chromosome | CDS | 2860499 | 678 | - | 0.278761 | |
| CAC2748 | ATP dependent RNA helicase DeaD, superfamily II | RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; | chromosome | CDS | 2877184 | 1446 | - | 0.324343 | |
| CAC2751 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 2881274 | 504 | - | 0.279762 | |
| CAC2759 | Response regulator (CheY receiver domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 2891279 | 687 | + | 0.310044 | |
| CAC2768 | Transcriptional regulators, AcrR family | SubName: Full=Transcriptional regulators, AcrR family; | chromosome | CDS | 2900116 | 651 | - | 0.281106 | |
| CAC2773 | Transcriptional regulators, AcrR family | SubName: Full=Transcriptional regulators, AcrR family; | chromosome | CDS | 2905472 | 615 | + | 0.278049 | |
| CAC2793 | Transcriptional regulator, Lrp family (possible nitrite reductase regulator NirD) | SubName: Full=Transcriptional regulator, Lrp family (Possible nitrite reductase regulator NirD); | chromosome | CDS | 2921671 | 468 | - | 0.282051 | |
| CAC2794 | Transcriptional regulator, Lrp family (possible nitrite reductase regulator NirD) | SubName: Full=Transcriptional regulator, Lrp family (Possible nitrite reductase regulator NirD); | chromosome | CDS | 2922143 | 453 | - | 0.282561 | |
| CAC2818 | AraC-type DNA-binding domain-containing protein, transcriptional regulator | SubName: Full=AraC-type DNA-binding domain-containing protein, transcriptional regulator; | chromosome | CDS | 2946629 | 840 | - | 0.29881 | |
| CAC2833 | Uncharacterized conserved protein, YAEG family | SubName: Full=Uncharacterized conserved protein, YAEG family; | chromosome | CDS | 2963141 | 1035 | - | 0.276329 | |
| CAC2842 | Transcription accessory protein TEX, RNA-binding protein containing S1 domain | SubName: Full=Transcription accessory protein TEX, RNA-binding protein containing S1 domain; | chromosome | CDS | 2971976 | 2157 | - | 0.331015 | |
| CAC2851 | GntR/FadR-family transcriptional regulator fused to conserved membrane protein (YHCF B.subtilis homolog) | SubName: Full=GntR/FadR-family transcriptional regulator fused to conserved membrane protein (YHCF B.subtilis homolog); | chromosome | CDS | 2984520 | 630 | - | 0.284127 | |
| CAC2889 | Transcription termination factor rho | RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; | chromosome | CDS | 3019655 | 1452 | - | 0.337466 | |
| CAC2934 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3066542 | 339 | + | 0.336283 | |
| CAC2935 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 3067021 | 471 | - | 0.356688 | |
| CAC2939 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 3070820 | 648 | - | 0.28858 | |
| CAC2950 | Lactose phosphotransferase system repressor lacR | SubName: Full=Lactose phosphotransferase system repressor lacR; | chromosome | CDS | 3084510 | 765 | - | 0.290196 | |
| CAC2955 | Lactose phosphotransferase system repressor lacR | SubName: Full=Lactose phosphotransferase system repressor lacR; | chromosome | CDS | 3088430 | 765 | - | 0.298039 | |
| CAC2962 | Transcriptional regulators of the LacI family | SubName: Full=Transcriptional regulators of the LacI family; | chromosome | CDS | 3096016 | 1014 | + | 0.310651 | |
| CAC2966 | Lactose phosphotransferase system repressor lacR | SubName: Full=Lactose phosphotransferase system repressor lacR; | chromosome | CDS | 3100856 | 765 | - | 0.301961 | |
| CAC2990 | Cold shock protein | SubName: Full=Cold shock protein; | chromosome | CDS | 3127359 | 198 | + | 0.338384 | |
| CAC2996 | Superfamily II DNA/RNA helicase, SNF2 family | SubName: Full=Superfamily II DNA/RNA helicase, SNF2 family; | chromosome | CDS | 3133673 | 3159 | - | 0.281102 | |
| CAC3010 | ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog | SubName: Full=ATP-dependent RNA helicase (Superfamily II), YDBR B.subtilis ortholog; | chromosome | CDS | 3149865 | 1587 | - | 0.300567 | |
| CAC3037 | Catabolite control protein, LacI family transcriptional regulator | RecName: Full=HTH-type transcriptional regulator RegA; | chromosome | CDS | 3183706 | 1005 | - | 0.311443 | |
| CAC3046 | Transcriptional regulator, LytR family | SubName: Full=Transcriptional regulator, LytR family; | chromosome | CDS | 3195096 | 1026 | - | 0.307992 | |
| CAC3063 | Transcriptional regulator, LytR family | SubName: Full=Transcriptional regulator, LytR family; | chromosome | CDS | 3212042 | 1020 | - | 0.322549 | |
| CAC3088 | NtrC family transcriptional regulator, ATPase domain fused to two PAS domains | SubName: Full=NtrC family transcriptional regulator, ATPase domain fused to two PAS domains; | chromosome | CDS | 3241502 | 2004 | + | 0.306886 | |
| CAC3104 | DNA-dependent RNA polymerase alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 3254878 | 948 | - | 0.335443 | |
| CAC3142 | DNA-dependent RNA polymerase beta' subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3275271 | 3549 | - | 0.349394 | |
| CAC3143 | DNA-dependent RNA polymerase beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 3278841 | 3726 | - | 0.356683 | |
| CAC3149 | Transcription antiterminator NusG | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 3285307 | 522 | - | 0.319923 | |
| CAC3152 | DNA-dependent RNA polymerase sigma subunit | SubName: Full=DNA-dependent RNA polymerase sigma subunit; | chromosome | CDS | 3288152 | 639 | - | 0.311424 | |
| CAC3192 | Transciptional regulator CTSR | SubName: Full=Transciptional regulator CTSR; | chromosome | CDS | 3331485 | 462 | - | 0.309524 | |
| CAC3198 | Transcription elongation factor, greA | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 3343482 | 477 | - | 0.322851 | |
| CAC3200 | Predicted transcriptional regulator, homolog of Bvg accessory factor | RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; | chromosome | CDS | 3345072 | 822 | - | 0.324818 | |
| CAC3205 | Stage II sporulation protein E, serine phosphatase family | SubName: Full=Stage II sporulation protein E, serine phosphatase family; | chromosome | CDS | 3351731 | 2388 | - | 0.304858 | |
| CAC3214 | Stage V sporulation protein T, AbrB family transcriptional regulator | SubName: Full=Stage V sporulation protein T, AbrB family transcriptional regulator; | chromosome | CDS | 3360238 | 552 | - | 0.356884 | |
| CAC3216 | Transcription-repair coupling factor, MFD (superfamily II helicase ) | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 3362265 | 3516 | - | 0.317691 | |
| CAC3220 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 3369337 | 687 | - | 0.327511 | |
| CAC3247 | Predicted transcriptional regulator, lacI/xre family | SubName: Full=Predicted transcriptional regulator, lacI/xre family; | chromosome | CDS | 3399966 | 732 | - | 0.301913 | |
| CAC3251 | Sensory transduction protein containing HD_GYP domain | SubName: Full=Sensory transduction protein containing HD_GYP domain; | chromosome | CDS | 3402720 | 1503 | + | 0.297405 | |
| CAC3256 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 3407711 | 423 | + | 0.340426 | |
| CAC3267 | Specialized sigma subunit of RNA polymerase | SubName: Full=Specialized sigma subunit of RNA polymerase; | chromosome | CDS | 3415710 | 573 | - | 0.277487 | |
| CAC3271 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 3419228 | 618 | - | 0.276699 | |
| CAC3283 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 3443783 | 453 | - | 0.313466 | |
| CAC3303 | Superfamily II DNA/RNA helicases, SNF2 family | SubName: Full=Superfamily II DNA/RNA helicases, SNF2 family; | chromosome | CDS | 3469203 | 3234 | - | 0.311379 | |
| CAC3319 | Signal transduction histidine kinase | SubName: Full=Signal transduction histidine kinase; | chromosome | CDS | 3491524 | 1338 | + | 0.304185 | |
| CAC3324 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3495959 | 210 | - | 0.338095 | |
| CAC3338 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3511107 | 321 | + | 0.302181 | |
| CAC3345 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 3518010 | 582 | + | 0.314433 | |
| CAC3349 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 3522688 | 858 | - | 0.300699 | |
| CAC3360 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 3538619 | 882 | + | 0.307256 | |
| CAC3361 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 3539488 | 939 | - | 0.310969 | |
| CAC3366 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3543132 | 327 | - | 0.238532 | |
| CAC3370 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3547300 | 528 | - | 0.333333 | |
| CAC3374 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 3551806 | 465 | - | 0.290323 | |
| CAC3386 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3563732 | 981 | + | 0.282365 | |
| CAC3399 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3583360 | 351 | - | 0.321937 | |
| CAC3406 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 3589250 | 567 | - | 0.312169 | |
| CAC3409 | Transcriptional regulators, LysR family | SubName: Full=Transcriptional regulators, LysR family; | chromosome | CDS | 3593550 | 960 | - | 0.31875 | |
| CAC3413 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 3598332 | 432 | + | 0.319444 | |
| CAC3418 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 3604583 | 468 | - | 0.299145 | |
| CAC3424 | Transcriptional regulator, RpiR family | SubName: Full=Transcriptional regulator, RpiR family; | chromosome | CDS | 3610162 | 708 | + | 0.282486 | |
| CAC3429 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 3616468 | 654 | - | 0.328746 | |
| CAC3433 | Transcriptional regulators, AcrR family | SubName: Full=Transcriptional regulators, AcrR family; | chromosome | CDS | 3622062 | 558 | + | 0.284946 | |
| CAC3437 | Predicted membrane-associated Zn-dependent protease, HtpX family (BlaR subfamily) | SubName: Full=Predicted membrane-associated Zn-dependent protease, HtpX family (BlaR subfamily); | chromosome | CDS | 3627534 | 1626 | - | 0.288438 | |
| CAC3438 | Transcriptional regulator, (BlaI/MecI subfamily) | SubName: Full=Transcriptional regulator, (BlaI/MecI subfamily); | chromosome | CDS | 3629174 | 375 | - | 0.304 | |
| CAC3441 | DNA/RNA helicase, SNF2 | SubName: Full=DNA/RNA helicase, SNF2; | chromosome | CDS | 3631171 | 2850 | - | 0.292632 | |
| CAC3443 | Multidrug-efflux transporter transcription regulator, BltR | SubName: Full=Multidrug-efflux transporter transcription regulator, BltR; | chromosome | CDS | 3638752 | 828 | - | 0.315217 | |
| CAC3445 | Predicted acetyltransferase | SubName: Full=Predicted acetyltransferase; | chromosome | CDS | 3641198 | 444 | - | 0.259009 | |
| CAC3458 | Uncharacterized protein, homolog of B. anthracis (gi:48942631) | SubName: Full=Uncharacterized protein, homolog of B. anthracis (Gi:48942631); | chromosome | CDS | 3655260 | 798 | - | 0.285714 | |
| CAC3466 | Transcriptional regulator, LysR family | SubName: Full=Transcriptional regulator, LysR family; | chromosome | CDS | 3664373 | 879 | + | 0.317406 | |
| CAC3472 | Protein containing transcriptional regulator domain | SubName: Full=Protein containing transcriptional regulator domain; | chromosome | CDS | 3672333 | 1038 | - | 0.318882 | |
| CAC3475 | Transcriptional regulator, merR family | SubName: Full=Transcriptional regulator, merR family; | chromosome | CDS | 3675890 | 732 | - | 0.319672 | |
| CAC3481 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 3680458 | 579 | - | 0.307427 | |
| CAC3485 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 3684507 | 465 | + | 0.350538 | |
| CAC3487 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3686027 | 342 | + | 0.277778 | |
| CAC3488 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3686456 | 327 | - | 0.296636 | |
| CAC3494 | Transcription regulator, YOBV B.subtilis homolog | SubName: Full=Transcription regulator, YOBV B.subtilis homolog; | chromosome | CDS | 3690162 | 903 | - | 0.264673 | |
| CAC3496 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | chromosome | CDS | 3691912 | 321 | + | 0.305296 | |
| CAC3502 | Transcriptional regulator, fadR family | SubName: Full=Transcriptional regulator, fadR family; | chromosome | CDS | 3697563 | 714 | + | 0.330532 | |
| CAC3504 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 3699691 | 522 | + | 0.33908 | |
| CAC3507 | Transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | chromosome | CDS | 3702365 | 381 | + | 0.286089 | |
| CAC3509 | Transcriptional regulator, MerR family (duplicated domains) | SubName: Full=Transcriptional regulator, MerR family (Duplicated domains); | chromosome | CDS | 3704044 | 753 | - | 0.304117 | |
| CAC3512 | AraC-type DNA-binding domain-containing protein | SubName: Full=AraC-type DNA-binding domain-containing protein; | chromosome | CDS | 3709698 | 762 | + | 0.272966 | |
| CAC3517 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 3715608 | 693 | - | 0.350649 | |
| CAC3518 | Transcriptional regulators, AcrR family | SubName: Full=Transcriptional regulators, AcrR family; | chromosome | CDS | 3716587 | 588 | - | 0.358844 | |
| CAC3525 | Uncharacterized conserved protein, YjeB/RRF2 family | SubName: Full=Uncharacterized conserved protein, YjeB/RRF2 family; | chromosome | CDS | 3722799 | 507 | - | 0.311637 | |
| CAC3553 | Transcriptional regulator (LacI family) | SubName: Full=Transcriptional regulator (LacI family); | chromosome | CDS | 3749120 | 1008 | + | 0.292659 | |
| CAC3579 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 3778397 | 465 | - | 0.333333 | |
| CAC3603 | Transcriptional regulator, FadR family | SubName: Full=Transcriptional regulator, FadR family; | chromosome | CDS | 3804011 | 678 | + | 0.297935 | |
| CAC3606 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 3808155 | 609 | - | 0.279146 | |
| CAC3611 | Regulatory protein related to malT, positive regulator of mal regulon (ATPase and HTH-type DNA-binding domain) | SubName: Full=Regulatory protein related to malT, positive regulator of mal regulon (ATPase and HTH-type DNA-binding domain); | chromosome | CDS | 3812853 | 2589 | + | 0.280417 | |
| CAC3639 | CRO repressor-like DNA-binding protein | SubName: Full=CRO repressor-like DNA-binding protein; | chromosome | CDS | 3840211 | 219 | - | 0.342466 | |
| CAC3645 | CRO repressor-like DNA-binding protein | SubName: Full=CRO repressor-like DNA-binding protein; | chromosome | CDS | 3846471 | 222 | - | 0.328829 | |
| CAC3646 | Predicted transcriptional regulator, containing DNA-binding domain of xre family | SubName: Full=Predicted transcriptional regulator, containing DNA-binding domain of xre family; | chromosome | CDS | 3847040 | 699 | + | 0.283262 | |
| CAC3647 | Transition state regulatory protein AbrB | SubName: Full=Transition state regulatory protein AbrB; | chromosome | CDS | 3847785 | 246 | - | 0.321138 | |
| CAC3649 | Possible stage V sporulation protein T, transcriptional regulator AbrB homolog | SubName: Full=Possible stage V sporulation protein T, transcriptional regulator AbrB homolog; | chromosome | CDS | 3849693 | 255 | + | 0.341176 | |
| CAC3651 | Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) | SubName: Full=Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family); | chromosome | CDS | 3851618 | 1446 | + | 0.296681 | |
| CAC3663 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | SubName: Full=Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 3865664 | 678 | - | 0.30826 | |
| CAC3669 | Transcriptional regulator, MarR/EmrR family | SubName: Full=Transcriptional regulator, MarR/EmrR family; | chromosome | CDS | 3870221 | 462 | - | 0.292208 | |
| CAC3673 | XylR transcriptional regulator | SubName: Full=XylR transcriptional regulator; | chromosome | CDS | 3874104 | 1158 | - | 0.32038 | |
| CAC3677 | KDP operon transcriptional regulatory protein KdpE (CheY-like receiver domain and HTH-type DNA-binding domain) | SubName: Full=KDP operon transcriptional regulatory protein KdpE (CheY-like receiver domain and HTH-type DNA-binding domain); | chromosome | CDS | 3878027 | 699 | - | 0.343348 | |
| CAC3687 | Transcriptional regulator, AcrR family | SubName: Full=Transcriptional regulator, AcrR family; | chromosome | CDS | 3891923 | 591 | + | 0.28088 | |
| CAC3695 | Possible transcriptional regulator, containing DNA-binding domain of xre family | SubName: Full=Possible transcriptional regulator, containing DNA-binding domain of xre family; | chromosome | CDS | 3898451 | 360 | - | 0.297222 | |
| CAC3729 | Stage 0 sporulation J, ParB family of DNA-binding proteins | SubName: Full=Stage 0 sporulation J, ParB family of DNA-binding proteins; | chromosome | CDS | 3931896 | 852 | - | 0.298122 | |
| CAC3731 | Stage 0 sporulation J, ParB family of DNA-binding proteins | SubName: Full=Stage 0 sporulation J, ParB family of DNA-binding proteins; | chromosome | CDS | 3933670 | 783 | - | 0.295019 | |
| CAP0006 | GntR family HTH transcriptional regulator | SubName: Full=GntR family HTH transcriptional regulator; | pSOL1 | CDS | 8487 | 714 | - | 0.344538 | |
| CAP0024 | MarR family HTH transcriptional regulator | SubName: Full=MarR family HTH transcriptional regulator; | pSOL1 | CDS | 24308 | 462 | - | 0.307359 | |
| CAP0028 | HTH transcriptional regulator TetR family | SubName: Full=HTH transcriptional regulator TetR family; | pSOL1 | CDS | 29416 | 564 | - | 0.306738 | |
| CAP0031 | Transcriptional activator HLYU, HTH of ArsR family | SubName: Full=Transcriptional activator HLYU, HTH of ArsR family; | pSOL1 | CDS | 31999 | 288 | + | 0.298611 | |
| CAP0046 | TetR family HTH transcriptional regulator | SubName: Full=TetR family HTH transcriptional regulator; | pSOL1 | CDS | 46233 | 567 | + | 0.285714 | |
| CAP0052 | MarR family HTH transcriptional regulator | SubName: Full=MarR family HTH transcriptional regulator; | pSOL1 | CDS | 53038 | 444 | - | 0.322072 | |
| CAP0061 | Hypothetical protein | SubName: Full=Uncharacterized protein; | pSOL1 | CDS | 62341 | 276 | - | 0.264493 | |
| CAP0079 | ThlR, HTH transcriptional regulator TetR/AcrR family | SubName: Full=ThlR, HTH transcriptional regulator TetR/AcrR family; | pSOL1 | CDS | 83321 | 585 | - | 0.292308 | |
| CAP0087 | HTH transcriptional regulator TetR/AcrR family | SubName: Full=HTH transcriptional regulator TetR/AcrR family; | pSOL1 | CDS | 90718 | 567 | + | 0.391534 | |
| CAP0091 | Predicted regulator of stationary/sporulation gene expression | SubName: Full=Predicted regulator of stationary/sporulation gene expression; | pSOL1 | CDS | 94702 | 231 | - | 0.372294 | |
| CAP0100 | HTH transcriptional regulator TetR/AcrR family | SubName: Full=HTH transcriptional regulator TetR/AcrR family; | pSOL1 | CDS | 105222 | 576 | - | 0.317708 | |
| CAP0103 | Transcriptional regulator HTH-type, ArsR family | SubName: Full=Transcriptional regulator HTH-type, ArsR family; | pSOL1 | CDS | 109863 | 408 | + | 0.27451 | |
| CAP0107 | HTH transcriptional regulator MerR family | SubName: Full=HTH transcriptional regulator MerR family; | pSOL1 | CDS | 113673 | 459 | + | 0.324619 | |
| CAP0108 | Predicted HTH containing transcriptional regulator | SubName: Full=Predicted HTH containing transcriptional regulator; | pSOL1 | CDS | 114217 | 543 | + | 0.289134 | |
| CAP0110 | NH2-acetyltransferase | SubName: Full=NH2-acetyltransferase; | pSOL1 | CDS | 116756 | 414 | + | 0.342995 | |
| CAP0111 | NH2-acetyltransferase | SubName: Full=NH2-acetyltransferase; | pSOL1 | CDS | 117240 | 489 | + | 0.316973 | |
| CAP0127 | HTH transcriptional regulator TetR family | SubName: Full=HTH transcriptional regulator TetR family; | pSOL1 | CDS | 137518 | 648 | - | 0.29321 | |
| CAP0153 | Predicted transcriptional regulator | SubName: Full=Predicted transcriptional regulator; | pSOL1 | CDS | 165625 | 348 | + | 0.298851 | |
| CAP0157 | Special sigma factor (sigF/sigE/sigG family) | SubName: Full=Special sigma factor (SigF/sigE/sigG family); | pSOL1 | CDS | 168036 | 732 | - | 0.269126 | |
| CAP0167 | Specialized sigma factor (SigF/SigE family) | RecName: Full=Uncharacterized protein CA_P0167; | pSOL1 | CDS | 180992 | 555 | + | 0.264865 | |
| CAP0178 | Transcriptional regulator, MerR family | SubName: Full=Transcriptional regulator, MerR family; | pSOL1 | CDS | 191582 | 372 | - | 0.255376 | |
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