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2024-05-06 23:57:07

Gene list

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COG category: Transcription
Organism: Clostridium acetobutylicum ATCC 824, ATCC 824

Number of genes found: 339

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Clostridium acetobutylicum ATCC 824, ATCC 824
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
CAC0019 Transcriptional regulator, AcrR familychromosome CDS27017 606 - 0.282178
CAC0023 Transcriptional regulator, LysR familychromosome CDS33214 900 + 0.306667
CAC0032 Transcriptional regulator TetR/AcrR familychromosome CDS42932 570 + 0.310526
CAC0078 Accessory gene regulator protein Bchromosome CDS86728 630 + 0.280952
CAC0081 Accessory gene regulator protein Achromosome CDS88953 726 + 0.264463
CAC0093 Transcriptional regulators, LysR familychromosome CDS101128 873 - 0.280641
CAC0113 Transcriptional regulator of sugar metabolismchromosome CDS124089 762 + 0.296588
CAC0115 Uncharacterized protein, Yje/RRF2 familychromosome CDS125487 414 + 0.330918
CAC0155 Putative regulator of the PTS system for mannitol (gene MltR)chromosome CDS175951 2055 + 0.265207
CAC0160 Predicted acetyltransferasechromosome CDS182984 450 + 0.3
CAC0162 Transcriptional regulator MarR/EmrR familychromosome CDS185565 474 - 0.324895
CAC0174 Response regulator, CheY-like receiver domain and HTH DNA-binding domainchromosome CDS197025 642 - 0.294393
CAC0184 Predicted acetyltransferasechromosome CDS208566 963 + 0.310488
CAC0186 Xre family DNA-binding domain and TPR-repeat-containing proteinchromosome CDS210917 1305 - 0.27433
CAC0189 Similar to transcriptional regulator, GntR familychromosome CDS214335 732 - 0.321038
CAC0191 Transcriptional regulator, RpiR familychromosome CDS216117 852 + 0.335681
CAC0195 Predicted transcriptional regulatorchromosome CDS221433 348 - 0.324713
CAC0197 Transcriptional regulator, MarR/EmrR familychromosome CDS223143 423 + 0.340426
CAC0201 Transcriptional regulators, AcrR familychromosome CDS225955 585 - 0.28547
CAC0212 Biotin-(acetyl-CoA carboxylase) ligasechromosome CDS237128 810 + 0.324691
CAC0224 Response regulator (CheY-like receiver domain and HTH DNA-binding domain)chromosome CDS248980 672 + 0.275298
CAC0231 Transcripcional regulator of sugar metabolismchromosome CDS262569 765 + 0.317647
CAC0240 Response regulator (CheY-like recever domain and HTH DNA-binding domain)chromosome CDS271300 627 + 0.301435
CAC0265 Transcriptional regulator, GntR familychromosome CDS297523 366 + 0.289617
CAC0284 Transcriptional regulatory protein, Sir2 familychromosome CDS323841 738 + 0.307588
CAC0289 Response regulator (CheY domain, HTH domain)chromosome CDS328308 708 + 0.29096
CAC0310 Regulators of stationary/sporulation gene expression, abrB B.subtilis orthologchromosome CDS363819 246 - 0.304878
CAC0313 Phage shock protein Achromosome CDS366858 657 - 0.30137
CAC0321 Response regulator (CheY-like domain, HTH domain)chromosome CDS375646 693 + 0.320346
CAC0324 TPR repeats containing proteinchromosome CDS380405 1308 - 0.272171
CAC0360 Transcriptional regulator, LacI family (HTH lacI domain), B.subtilis degA orthologchromosome CDS419727 987 + 0.329281
CAC0371 Response regulator (CheY-like domain and HTH domain)chromosome CDS433681 687 + 0.30131
CAC0379 Transcriptional regulator, GntR familychromosome CDS441794 651 + 0.30722
CAC0382 Possible transcriptional regulator of levanase operon, AAA-ATPase domain (NtrC family), fused to 2 BglG-like domains, ortholog of B.subtilis levRchromosome CDS444719 2691 - 0.30249
CAC0393 KDG operon repressor (gene kdgR), LacI familychromosome CDS457385 1035 + 0.329469
CAC0404 Serine/threonine protein kinase fused to TPR repeats domainchromosome CDS467702 1974 + 0.306991
CAC0422 Transcriptional antiterminator licTchromosome CDS488038 849 + 0.281508
CAC0432 Methyl-accepting chemotaxis proteinchromosome CDS499814 1014 + 0.356016
CAC0450 Response regulator (CheY-like and HTH domains)chromosome CDS517926 684 + 0.30848
CAC0457 Transcriptional regulator, AcrR familychromosome CDS527481 564 - 0.267731
CAC0459 NtrC family transcriptional regulator (PAS and AAA domains)chromosome CDS529651 1884 - 0.328556
CAC0461 Mercuric resistance operon regulatory protein, MerR familychromosome CDS533100 399 + 0.26817
CAC0465 Predicted transcriptional regulator, dicA/hipB/ansR familychromosome CDS536448 792 - 0.270202
CAC0493 Uncharcterized small conserved protein, YhhG familychromosome CDS567127 321 + 0.299065
CAC0514 CBS domain, similar to B.subtilis ytoIchromosome CDS590854 1305 + 0.321073
CAC0524 Response regulator (CheY-like and HTH domains)chromosome CDS604412 687 + 0.407569
CAC0531 Transcriptional regulator, RpiR familychromosome CDS614278 774 + 0.293282
CAC0549 Predicted transcriptional regulatorchromosome CDS637029 423 - 0.300236
CAC0550 Possible sigma factorchromosome CDS637686 429 + 0.277389
CAC0559 Transcriptional regulator, MarR/EmrR familychromosome CDS646645 444 + 0.297297
CAC0564 Response regulator (REC, HTH domains)chromosome CDS652910 702 + 0.309117
CAC0569 SACPA operon antiterminator (sacT)chromosome CDS658307 825 + 0.282424
CAC0571 Predicted transcriptional regulatorchromosome CDS661465 324 + 0.345679
CAC0585 N-terminal CheY reciever domain fused to C-terminal uncharacterized CheX-like domainchromosome CDS678868 876 + 0.311644
CAC0599 Transcriptional regulator, GntR familychromosome CDS691644 378 + 0.31746
CAC0627 Transcriptional regulator, MarR/EmrR familychromosome CDS729593 435 + 0.278161
CAC0653 Response regulator (CheY-like receiver domain and HTH DNA binding domain)chromosome CDS758945 666 + 0.307808
CAC0693 Transcriptional regulator of the LacI familychromosome CDS800592 1005 + 0.297512
CAC0707 RNA polymerase sigma-54 factorchromosome CDS818506 1395 + 0.293907
CAC0708 Putative transcriptional regulatorchromosome CDS820041 1035 + 0.329469
CAC0715 FUSION ribonuclease and ribosomal protein S1 domainchromosome CDS828112 2193 + 0.331509
CAC0723 Transcriptional regulator, AcrR familychromosome CDS838031 558 + 0.277778
CAC0724 Transcriptional regulator, AcrR familychromosome CDS838789 558 - 0.277778
CAC0745 Transcriptional regulator, LysR familychromosome CDS865592 882 + 0.340136
CAC0759 Hypothetical proteinchromosome CDS881870 627 + 0.30622
CAC0763 Transcriptional regulator, MarR familychromosome CDS885087 474 - 0.316456
CAC0766 Predicted transcriptional regulator (MerR family)chromosome CDS888738 381 + 0.291339
CAC0768 Transcriptional regulator, LysR familychromosome CDS890480 891 + 0.315376
CAC0778 ATP-dependent RNA helicase, superfamily IIchromosome CDS900231 1758 + 0.319113
CAC0784 ATP-dependent RNA helicase, superfamily IIchromosome CDS906689 1125 - 0.344
CAC0807 Cold shock proteinchromosome CDS933945 198 + 0.328283
CAC0821 Transcriptional regulator (TetR/AcrR family)chromosome CDS950070 603 + 0.281924
CAC0830 Response regulatorchromosome CDS961417 690 + 0.278261
CAC0832 Fusion: transcriptional regulator and conserved domainchromosome CDS963263 723 + 0.293223
CAC0841 Predicted transcriptional regulatorchromosome CDS971103 540 - 0.335185
CAC0844 Barstar-like protein ribonuclease (barnase) inhibitorchromosome CDS973115 276 + 0.300725
CAC0846 Hypothetical protein, CF-29 familychromosome CDS974296 255 + 0.286275
CAC0849 Predicted transcriptional regulatorchromosome CDS977746 309 - 0.339806
CAC0856 Transcriptional regulator, LacI family (probably maltose operon transcriptional repressor)chromosome CDS985886 1041 + 0.329491
CAC0860 Two-component response regulatorchromosome CDS990196 696 + 0.313218
CAC0865 Two-component response regulatorchromosome CDS994813 657 + 0.29376
CAC0876 Transcriptional regulator, MarR/EmrR familychromosome CDS1006310 456 + 0.291667
CAC0933 Transcriptional regulator of NagC/XylR family (xylose repressor)chromosome CDS1074641 1128 + 0.29078
CAC0949 Predicted transcriptional regulatorchromosome CDS1088983 447 + 0.295302
CAC0957 Xre family DNA-binding domain and TPR-repeat-containing proteinchromosome CDS1094974 1305 + 0.28046
CAC0958 Xre family DNA-binding domain and TPR-repeat-containing proteinchromosome CDS1096298 1266 + 0.274092
CAC0977 Transcriptional regulator, Lrp familychromosome CDS1125412 468 - 0.318376
CAC1007 Predicted acetyltransferasechromosome CDS1154993 525 - 0.310476
CAC1032 Predicted transcriptional regulatorchromosome CDS1184134 261 + 0.344828
CAC1043 Xre family DNA-binding domain and TPR-repeat containing proteinchromosome CDS1193798 1305 + 0.25364
CAC1046 Transcriptional regulator, LysR familychromosome CDS1199004 912 + 0.297149
CAC1070 Transcriptional regulator, AcrR familychromosome CDS1222444 417 - 0.263789
CAC1071 Transcriptional regulator, AcrR familychromosome CDS1222894 105 - 0.27619
CAC1086 Transcriptional regulators of NagC/XylR familychromosome CDS1254775 879 + 0.324232
CAC1153 Hypothetical proteinchromosome CDS1318341 252 + 0.222222
CAC1214 Xre family DNA-binding domain and TPR-repeat containing proteinchromosome CDS1358390 1305 + 0.257471
CAC1226 RNA polymerase sigma factorchromosome CDS1369553 684 + 0.266082
CAC1237 Hypothetical proteinchromosome CDS1379038 498 + 0.271084
CAC1264 Membrane bound transcriptional regulator of LytR familychromosome CDS1406844 1215 + 0.283128
CAC1280 Transcriptional regulator of heat shock genes, HrcAchromosome CDS1423874 1032 + 0.299419
CAC1300 RNA polymerase sigma factor RPODchromosome CDS1443616 1137 + 0.351803
CAC1320 Glycerol-3-phosphate responsive antiterminator (mRNA-binding), GLPPchromosome CDS1460835 558 + 0.297491
CAC1333 AraC-type sugar metabolism regulatorchromosome CDS1472745 861 + 0.263647
CAC1340 Transcriptional regulator of the LacI familychromosome CDS1478746 1089 - 0.311295
CAC1355 Transcriptional antiterminator (BglG family)chromosome CDS1500207 864 - 0.275463
CAC1404 Transcriptional regulator of sugar metabolism (deoR family)chromosome CDS1547695 738 + 0.308943
CAC1406 Transcriptional antiterminator (BglG family)chromosome CDS1550310 834 + 0.284173
CAC1416 Predicted acetyltransferasechromosome CDS1561646 516 + 0.310078
CAC1430 Transcriptional regulators of sugar metabolism (deoR family)chromosome CDS1574943 741 + 0.318489
CAC1451 AraC-type DNA-binding domain-containing proteinchromosome CDS1599152 888 - 0.27027
CAC1455 Two-component system regulator (CheY domain and HTH-like DNA-binding domain)chromosome CDS1604046 678 + 0.315634
CAC1463 Predicted transcriptional regulatorchromosome CDS1613206 168 + 0.309524
CAC1465 Transcriptional regulator, MarR/EmrR familychromosome CDS1615920 420 + 0.280952
CAC1467 Transcriptional regulator, Lrp familychromosome CDS1616961 450 + 0.266667
CAC1468 Predicted acetyltransferasechromosome CDS1617414 429 + 0.277389
CAC1469 Iron-dependent transcription repressorchromosome CDS1617889 369 + 0.298103
CAC1481 Transcriptional regulator, LysR familychromosome CDS1628817 879 - 0.29124
CAC1483 Predicted transcriptional regulatorchromosome CDS1630694 327 - 0.321101
CAC1506 Response regulator (CheY-like receiver domain and a HTH)chromosome CDS1650171 654 + 0.299694
CAC1509 Specialized sigma subunit of RNA polymerasechromosome CDS1652951 555 + 0.295496
CAC1516 Response regulator (CheY-like receiver domain and HTH DNA-binding domain)chromosome CDS1658951 690 + 0.304348
CAC1523 Fructokinasechromosome CDS1665236 867 + 0.351788
CAC1536 Transcriptional regulator, AcrR familychromosome CDS1680316 645 - 0.293023
CAC1552 Response regulator (CheY-like receiver domain and HTH DNA-binding domain)chromosome CDS1694562 684 + 0.30848
CAC1559 Predicted transcriptional regulatorchromosome CDS1703698 357 - 0.29972
CAC1569 Transcriptional regulators, MarR/EmrR familychromosome CDS1714214 432 - 0.282407
CAC1578 Predicted transcriptional regulatorchromosome CDS1722226 333 - 0.27027
CAC1581 Response regulator (CheY-like receiver domain and HTH DNA-binding domain)chromosome CDS1724906 705 + 0.256738
CAC1588 Malolactic regulator, LysR familychromosome CDS1731290 882 - 0.291383
CAC1668 Transcriptional regulator, AcrR familychromosome CDS1811180 588 + 0.284014
CAC1670 Response regulator (CheY-like receiver domain and DNA-binding HTH domain)chromosome CDS1814010 762 + 0.259843
CAC1672 Rad3-related DNA helicasechromosome CDS1816050 2376 + 0.309764
CAC1675 Predicted transcriptional regulator (HTH winged helix type)chromosome CDS1824704 420 + 0.335714
CAC1689 DNA-dependent RNA polymerase sigma subunitchromosome CDS1839816 705 + 0.314894
CAC1695 DNA-dependent RNA polymerase sigma subunitchromosome CDS1846829 708 + 0.306497
CAC1696 Specialized DNA-dependent RNA polymerase sigma subunitchromosome CDS1847610 774 + 0.329457
CAC1698 Uncharacterized conserved protein, YTCG B.subtilis orthologchromosome CDS1848907 456 + 0.311404
CAC1700 Response regulator (CheY-like receiver domain and DNA-binding HTH domain)chromosome CDS1850364 699 + 0.340486
CAC1719 RNA polymerase-associated protein RpoZ, omega subunit (YLOH B.subtilis ortholog)chromosome CDS1867885 219 + 0.324201
CAC1736 RecG helicasechromosome CDS1883855 2037 + 0.308297
CAC1748 DsRNA-specific ribonuclease IIIchromosome CDS1894870 693 + 0.350649
CAC1749 BioB/LipA-like proteinchromosome CDS1895563 1077 + 0.312906
CAC1766 Predicted sigma factorchromosome CDS1911395 558 + 0.272401
CAC1770 RNA polymerase sigma factor, SigK-likechromosome CDS1915404 702 + 0.276353
CAC1771 Uncharacterized protein, ykrI B.subtilis homologchromosome CDS1916116 744 + 0.228495
CAC1786 Transcriptional regulator, CodY B.subtilis orthologchromosome CDS1936387 777 + 0.292149
CAC1793 P-loop ATPase domain fused to LexA-like proteinchromosome CDS1942117 1443 + 0.279972
CAC1799 Transcription terminator NusAchromosome CDS1948646 1062 + 0.319209
CAC1800 Uncharacterized conserved protein, YLXR B.subtilis homologchromosome CDS1949748 267 + 0.307116
CAC1832 SOS regulatory protein LexAchromosome CDS1983311 615 + 0.325203
CAC1843 Predicted transcriptional regulator, YDCN B.subtilis orthologchromosome CDS1995661 360 + 0.291667
CAC1850 Transcriptional regulators, RpiR familychromosome CDS2002701 882 - 0.304989
CAC1867 Transcriptional regulator (phage-related) (Xre family)chromosome CDS2016380 276 + 0.289855
CAC1869 Predicted transcriptional regulatorchromosome CDS2017471 204 + 0.29902
CAC1913 Zn-finger containing proteinchromosome CDS2051108 219 - 0.292237
CAC1941 Transcription regulator AbrBchromosome CDS2062295 240 - 0.3375
CAC1945 Phage related anti-repressor proteinchromosome CDS2064029 735 - 0.30068
CAC1946 Phage related transcriptional regulator (Xre family)chromosome CDS2065030 285 - 0.329825
CAC1947 Phage related transcriptional regulator (Xre family)chromosome CDS2065522 372 + 0.284946
CAC1950 Hypothetical proteinchromosome CDS2067822 213 + 0.248826
CAC1965 Transcription elongation factor GreAchromosome CDS2081513 477 - 0.310273
CAC2052 DNA-dependent RNA polymerase sigma subunitchromosome CDS2158772 714 - 0.268908
CAC2053 Hypothetical proteinchromosome CDS2159469 591 - 0.262267
CAC2055 Predicted transcriptional regulatorchromosome CDS2160782 411 + 0.311436
CAC2060 Predicted transciptinal regulator (HTH-type), YPUH B.subtilis orthologchromosome CDS2164054 609 - 0.305419
CAC2071 Spo0A protein, (CheY-like receiver domain and HTH-type DNA binding domain)chromosome CDS2172521 846 - 0.312057
CAC2074 Arginine repressor, argRchromosome CDS2176927 453 - 0.326711
CAC2084 Transcription termination factor NusBchromosome CDS2185367 408 - 0.296569
CAC2111 Fibronectin-binding proteinchromosome CDS2203702 1713 + 0.283713
CAC2143 Sigma factor of SigD/WhiG familychromosome CDS2235085 726 - 0.312672
CAC2201 Hypothetical proteinchromosome CDS2294589 348 - 0.301724
CAC2214 Regulator of flagellin synthesis, FLGMchromosome CDS2305566 282 - 0.297872
CAC2236 Uncharacterized conserved protein of YjeB/RRF2 familychromosome CDS2330121 444 - 0.304054
CAC2242 Predicted transcriptional regulator, arsE familychromosome CDS2337364 369 - 0.303523
CAC2254 Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain)chromosome CDS2353179 642 + 0.274143
CAC2259 Predicted transcriptional regulator of MarR-familychromosome CDS2358175 180 - 0.3
CAC2274 RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolaseschromosome CDS2376156 2223 - 0.328835
CAC2297 Transcriptional regulator of MocR family (DNA-binding HTH domain and aminotransferase domain)chromosome CDS2399636 1404 - 0.276353
CAC2306 Sporulation-specific sigma factor Fchromosome CDS2409753 759 - 0.29776
CAC2319 Hypothetical proteinchromosome CDS2422167 213 - 0.258216
CAC2385 Hypothetical proteinchromosome CDS2493152 528 + 0.242424
CAC2394 Transcriptional regulator, LysR familychromosome CDS2503193 861 + 0.318235
CAC2397 Hypothetical proteinchromosome CDS2506022 717 - 0.266388
CAC2400 Serine/threonine kinase related protein, inactivated (HRDL motif absent) (fragment)chromosome CDS2511267 534 + 0.290262
CAC2430 Transcription elongation factor, greAchromosome CDS2546049 465 + 0.309677
CAC2435 Response regulator (CheY-like domain and HTH-type DNA-binding domain)chromosome CDS2552563 675 - 0.340741
CAC2451 SoxR family transcriptional regulator fused to SAM-dependent methyltransferasechromosome CDS2568042 1041 - 0.278578
CAC2468 Predicted acetyltransferasechromosome CDS2582421 423 - 0.314421
CAC2471 Transcriptional regulator, TetR/AcrR familychromosome CDS2583780 450 - 0.34
CAC2473 Predicted transcriptional regulatorchromosome CDS2585196 237 + 0.295359
CAC2476 Uncharacterized protein, homolog of Spirochaeta aurantia (gi:152901)chromosome CDS2586521 345 - 0.318841
CAC2486 Transcriptional regulator, MarR/EmrR familychromosome CDS2595228 438 - 0.33105
CAC2490 Xre family DNA-binding domain and TPR repeats containing proteinchromosome CDS2597236 1305 - 0.281992
CAC2491 Predicted acetyltransferasechromosome CDS2598885 468 + 0.301282
CAC2495 Predicted transcriptional regulatorchromosome CDS2601592 195 - 0.317949
CAC2509 Predicted acetyltransferasechromosome CDS2617354 495 - 0.349495
CAC2529 Predicted acetyltransferasechromosome CDS2637635 477 - 0.291405
CAC2530 Predicted N-acetyltransferasechromosome CDS2638197 498 - 0.315261
CAC2539 Predicted acetyltransferasechromosome CDS2647947 450 - 0.326667
CAC2546 Transcriptional regulator, FadR familychromosome CDS2653807 696 - 0.317529
CAC2552 Predicted transcriptional regulator CRO familychromosome CDS2660657 216 - 0.314815
CAC2560 Predicted acetyltransferasechromosome CDS2665450 456 - 0.267544
CAC2568 Predicted transcriptional regulatorchromosome CDS2671095 354 - 0.336158
CAC2571 Predicted acetyltransferasechromosome CDS2673404 504 - 0.333333
CAC2605 Transcriptional regulator (TetR/AcrR family)chromosome CDS2708970 585 + 0.273504
CAC2608 Trancriptional regulator of AraC familychromosome CDS2711293 855 + 0.284211
CAC2613 Transcriptional regulators of NagC/XylR familychromosome CDS2717044 942 - 0.356688
CAC2616 Predicted iron-dependent transcription repressorchromosome CDS2719849 474 + 0.28481
CAC2659 Putative stress-responsive transcriptional regulator PspCchromosome CDS2772756 192 - 0.307292
CAC2690 Transcriptional regulator, LysR familychromosome CDS2813051 816 - 0.306373
CAC2697 Hypothetical proteinchromosome CDS2819666 978 - 0.250511
CAC2735 Response regulator (CheY-like receiver domain and HTH-type DNA-binding)chromosome CDS2860499 678 - 0.278761
CAC2748 ATP dependent RNA helicase DeaD, superfamily IIchromosome CDS2877184 1446 - 0.324343
CAC2751 Predicted acetyltransferasechromosome CDS2881274 504 - 0.279762
CAC2759 Response regulator (CheY receiver domain and HTH-type DNA-binding domain)chromosome CDS2891279 687 + 0.310044
CAC2768 Transcriptional regulators, AcrR familychromosome CDS2900116 651 - 0.281106
CAC2773 Transcriptional regulators, AcrR familychromosome CDS2905472 615 + 0.278049
CAC2793 Transcriptional regulator, Lrp family (possible nitrite reductase regulator NirD)chromosome CDS2921671 468 - 0.282051
CAC2794 Transcriptional regulator, Lrp family (possible nitrite reductase regulator NirD)chromosome CDS2922143 453 - 0.282561
CAC2818 AraC-type DNA-binding domain-containing protein, transcriptional regulatorchromosome CDS2946629 840 - 0.29881
CAC2833 Uncharacterized conserved protein, YAEG familychromosome CDS2963141 1035 - 0.276329
CAC2842 Transcription accessory protein TEX, RNA-binding protein containing S1 domainchromosome CDS2971976 2157 - 0.331015
CAC2851 GntR/FadR-family transcriptional regulator fused to conserved membrane protein (YHCF B.subtilis homolog)chromosome CDS2984520 630 - 0.284127
CAC2889 Transcription termination factor rhochromosome CDS3019655 1452 - 0.337466
CAC2934 Predicted transcriptional regulatorchromosome CDS3066542 339 + 0.336283
CAC2935 Predicted acetyltransferasechromosome CDS3067021 471 - 0.356688
CAC2939 Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain)chromosome CDS3070820 648 - 0.28858
CAC2950 Lactose phosphotransferase system repressor lacRchromosome CDS3084510 765 - 0.290196
CAC2955 Lactose phosphotransferase system repressor lacRchromosome CDS3088430 765 - 0.298039
CAC2962 Transcriptional regulators of the LacI familychromosome CDS3096016 1014 + 0.310651
CAC2966 Lactose phosphotransferase system repressor lacRchromosome CDS3100856 765 - 0.301961
CAC2990 Cold shock proteinchromosome CDS3127359 198 + 0.338384
CAC2996 Superfamily II DNA/RNA helicase, SNF2 familychromosome CDS3133673 3159 - 0.281102
CAC3010 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis orthologchromosome CDS3149865 1587 - 0.300567
CAC3037 Catabolite control protein, LacI family transcriptional regulatorchromosome CDS3183706 1005 - 0.311443
CAC3046 Transcriptional regulator, LytR familychromosome CDS3195096 1026 - 0.307992
CAC3063 Transcriptional regulator, LytR familychromosome CDS3212042 1020 - 0.322549
CAC3088 NtrC family transcriptional regulator, ATPase domain fused to two PAS domainschromosome CDS3241502 2004 + 0.306886
CAC3104 DNA-dependent RNA polymerase alpha subunitchromosome CDS3254878 948 - 0.335443
CAC3142 DNA-dependent RNA polymerase beta' subunitchromosome CDS3275271 3549 - 0.349394
CAC3143 DNA-dependent RNA polymerase beta subunitchromosome CDS3278841 3726 - 0.356683
CAC3149 Transcription antiterminator NusGchromosome CDS3285307 522 - 0.319923
CAC3152 DNA-dependent RNA polymerase sigma subunitchromosome CDS3288152 639 - 0.311424
CAC3192 Transciptional regulator CTSRchromosome CDS3331485 462 - 0.309524
CAC3198 Transcription elongation factor, greAchromosome CDS3343482 477 - 0.322851
CAC3200 Predicted transcriptional regulator, homolog of Bvg accessory factorchromosome CDS3345072 822 - 0.324818
CAC3205 Stage II sporulation protein E, serine phosphatase familychromosome CDS3351731 2388 - 0.304858
CAC3214 Stage V sporulation protein T, AbrB family transcriptional regulatorchromosome CDS3360238 552 - 0.356884
CAC3216 Transcription-repair coupling factor, MFD (superfamily II helicase )chromosome CDS3362265 3516 - 0.317691
CAC3220 Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain)chromosome CDS3369337 687 - 0.327511
CAC3247 Predicted transcriptional regulator, lacI/xre familychromosome CDS3399966 732 - 0.301913
CAC3251 Sensory transduction protein containing HD_GYP domainchromosome CDS3402720 1503 + 0.297405
CAC3256 Predicted acetyltransferasechromosome CDS3407711 423 + 0.340426
CAC3267 Specialized sigma subunit of RNA polymerasechromosome CDS3415710 573 - 0.277487
CAC3271 Transcriptional regulator, AcrR familychromosome CDS3419228 618 - 0.276699
CAC3283 Transcriptional regulator, MarR/EmrR familychromosome CDS3443783 453 - 0.313466
CAC3303 Superfamily II DNA/RNA helicases, SNF2 familychromosome CDS3469203 3234 - 0.311379
CAC3319 Signal transduction histidine kinasechromosome CDS3491524 1338 + 0.304185
CAC3324 Predicted transcriptional regulatorchromosome CDS3495959 210 - 0.338095
CAC3338 Predicted transcriptional regulatorchromosome CDS3511107 321 + 0.302181
CAC3345 Transcriptional regulator, AcrR familychromosome CDS3518010 582 + 0.314433
CAC3349 Transcriptional regulator, LysR familychromosome CDS3522688 858 - 0.300699
CAC3360 Transcriptional regulator, LysR familychromosome CDS3538619 882 + 0.307256
CAC3361 Transcriptional regulator, LysR familychromosome CDS3539488 939 - 0.310969
CAC3366 Hypothetical proteinchromosome CDS3543132 327 - 0.238532
CAC3370 Predicted transcriptional regulatorchromosome CDS3547300 528 - 0.333333
CAC3374 Predicted acetyltransferasechromosome CDS3551806 465 - 0.290323
CAC3386 Hypothetical proteinchromosome CDS3563732 981 + 0.282365
CAC3399 Predicted transcriptional regulatorchromosome CDS3583360 351 - 0.321937
CAC3406 Transcriptional regulator, MarR/EmrR familychromosome CDS3589250 567 - 0.312169
CAC3409 Transcriptional regulators, LysR familychromosome CDS3593550 960 - 0.31875
CAC3413 Transcriptional regulator, MarR/EmrR familychromosome CDS3598332 432 + 0.319444
CAC3418 Transcriptional regulator, MarR/EmrR familychromosome CDS3604583 468 - 0.299145
CAC3424 Transcriptional regulator, RpiR familychromosome CDS3610162 708 + 0.282486
CAC3429 Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain)chromosome CDS3616468 654 - 0.328746
CAC3433 Transcriptional regulators, AcrR familychromosome CDS3622062 558 + 0.284946
CAC3437 Predicted membrane-associated Zn-dependent protease, HtpX family (BlaR subfamily)chromosome CDS3627534 1626 - 0.288438
CAC3438 Transcriptional regulator, (BlaI/MecI subfamily)chromosome CDS3629174 375 - 0.304
CAC3441 DNA/RNA helicase, SNF2chromosome CDS3631171 2850 - 0.292632
CAC3443 Multidrug-efflux transporter transcription regulator, BltRchromosome CDS3638752 828 - 0.315217
CAC3445 Predicted acetyltransferasechromosome CDS3641198 444 - 0.259009
CAC3458 Uncharacterized protein, homolog of B. anthracis (gi:48942631)chromosome CDS3655260 798 - 0.285714
CAC3466 Transcriptional regulator, LysR familychromosome CDS3664373 879 + 0.317406
CAC3472 Protein containing transcriptional regulator domainchromosome CDS3672333 1038 - 0.318882
CAC3475 Transcriptional regulator, merR familychromosome CDS3675890 732 - 0.319672
CAC3481 Transcriptional regulator, AcrR familychromosome CDS3680458 579 - 0.307427
CAC3485 Transcriptional regulator, MarR/EmrR familychromosome CDS3684507 465 + 0.350538
CAC3487 Predicted transcriptional regulatorchromosome CDS3686027 342 + 0.277778
CAC3488 Predicted transcriptional regulatorchromosome CDS3686456 327 - 0.296636
CAC3494 Transcription regulator, YOBV B.subtilis homologchromosome CDS3690162 903 - 0.264673
CAC3496 Predicted transcriptional regulatorchromosome CDS3691912 321 + 0.305296
CAC3502 Transcriptional regulator, fadR familychromosome CDS3697563 714 + 0.330532
CAC3504 Transcriptional regulator, AcrR familychromosome CDS3699691 522 + 0.33908
CAC3507 Transcriptional regulator, MerR familychromosome CDS3702365 381 + 0.286089
CAC3509 Transcriptional regulator, MerR family (duplicated domains)chromosome CDS3704044 753 - 0.304117
CAC3512 AraC-type DNA-binding domain-containing proteinchromosome CDS3709698 762 + 0.272966
CAC3517 Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain)chromosome CDS3715608 693 - 0.350649
CAC3518 Transcriptional regulators, AcrR familychromosome CDS3716587 588 - 0.358844
CAC3525 Uncharacterized conserved protein, YjeB/RRF2 familychromosome CDS3722799 507 - 0.311637
CAC3553 Transcriptional regulator (LacI family)chromosome CDS3749120 1008 + 0.292659
CAC3579 Transcriptional regulator, MarR/EmrR familychromosome CDS3778397 465 - 0.333333
CAC3603 Transcriptional regulator, FadR familychromosome CDS3804011 678 + 0.297935
CAC3606 Transcriptional regulator, AcrR familychromosome CDS3808155 609 - 0.279146
CAC3611 Regulatory protein related to malT, positive regulator of mal regulon (ATPase and HTH-type DNA-binding domain)chromosome CDS3812853 2589 + 0.280417
CAC3639 CRO repressor-like DNA-binding proteinchromosome CDS3840211 219 - 0.342466
CAC3645 CRO repressor-like DNA-binding proteinchromosome CDS3846471 222 - 0.328829
CAC3646 Predicted transcriptional regulator, containing DNA-binding domain of xre familychromosome CDS3847040 699 + 0.283262
CAC3647 Transition state regulatory protein AbrBchromosome CDS3847785 246 - 0.321138
CAC3649 Possible stage V sporulation protein T, transcriptional regulator AbrB homologchromosome CDS3849693 255 + 0.341176
CAC3651 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family)chromosome CDS3851618 1446 + 0.296681
CAC3663 Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain)chromosome CDS3865664 678 - 0.30826
CAC3669 Transcriptional regulator, MarR/EmrR familychromosome CDS3870221 462 - 0.292208
CAC3673 XylR transcriptional regulatorchromosome CDS3874104 1158 - 0.32038
CAC3677 KDP operon transcriptional regulatory protein KdpE (CheY-like receiver domain and HTH-type DNA-binding domain)chromosome CDS3878027 699 - 0.343348
CAC3687 Transcriptional regulator, AcrR familychromosome CDS3891923 591 + 0.28088
CAC3695 Possible transcriptional regulator, containing DNA-binding domain of xre familychromosome CDS3898451 360 - 0.297222
CAC3729 Stage 0 sporulation J, ParB family of DNA-binding proteinschromosome CDS3931896 852 - 0.298122
CAC3731 Stage 0 sporulation J, ParB family of DNA-binding proteinschromosome CDS3933670 783 - 0.295019
CAP0006 GntR family HTH transcriptional regulatorpSOL1 CDS8487 714 - 0.344538
CAP0024 MarR family HTH transcriptional regulatorpSOL1 CDS24308 462 - 0.307359
CAP0028 HTH transcriptional regulator TetR familypSOL1 CDS29416 564 - 0.306738
CAP0031 Transcriptional activator HLYU, HTH of ArsR familypSOL1 CDS31999 288 + 0.298611
CAP0046 TetR family HTH transcriptional regulatorpSOL1 CDS46233 567 + 0.285714
CAP0052 MarR family HTH transcriptional regulatorpSOL1 CDS53038 444 - 0.322072
CAP0061 Hypothetical proteinpSOL1 CDS62341 276 - 0.264493
CAP0079 ThlR, HTH transcriptional regulator TetR/AcrR familypSOL1 CDS83321 585 - 0.292308
CAP0087 HTH transcriptional regulator TetR/AcrR familypSOL1 CDS90718 567 + 0.391534
CAP0091 Predicted regulator of stationary/sporulation gene expressionpSOL1 CDS94702 231 - 0.372294
CAP0100 HTH transcriptional regulator TetR/AcrR familypSOL1 CDS105222 576 - 0.317708
CAP0103 Transcriptional regulator HTH-type, ArsR familypSOL1 CDS109863 408 + 0.27451
CAP0107 HTH transcriptional regulator MerR familypSOL1 CDS113673 459 + 0.324619
CAP0108 Predicted HTH containing transcriptional regulatorpSOL1 CDS114217 543 + 0.289134
CAP0110 NH2-acetyltransferasepSOL1 CDS116756 414 + 0.342995
CAP0111 NH2-acetyltransferasepSOL1 CDS117240 489 + 0.316973
CAP0127 HTH transcriptional regulator TetR familypSOL1 CDS137518 648 - 0.29321
CAP0153 Predicted transcriptional regulatorpSOL1 CDS165625 348 + 0.298851
CAP0157 Special sigma factor (sigF/sigE/sigG family)pSOL1 CDS168036 732 - 0.269126
CAP0167 Specialized sigma factor (SigF/SigE family)pSOL1 CDS180992 555 + 0.264865
CAP0178 Transcriptional regulator, MerR familypSOL1 CDS191582 372 - 0.255376