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# Helicobacter pylori 26695, 26695

>gid:1  HP0001  H. pylori predicted coding region HP0001
MATRTQARGAVVELLYAFESGNEEIKKIASSMLEEKKIKNNQLAFALSLF
NGVLEKINEIDALIEPHLKDWDFKRLGSMEKAILRLGAYEIGFTPTQNPI
IINECIELGKLYAEPNTPKFLNAILDSLSKKLTQKPLN
>gid:40  HP0036  H. pylori predicted coding region HP0036
MFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGV
YLYYSKTYPKHAKVIKSDPFVGLYLLQSAPSEYVYTLRDLDKDALIRPMA
SIGDKEALETRLLVGQRGYERYAQISQKTQKNGVISNICYQMLGLGVGGN
GFIETKFIKRFLNQQEPYYGDIGVRLEEHHKRLVVVQFDPFFPKNPFLKN
DEILAINHQKIHSLAEFEWVVSNLKYQSLAKVEIKRNHKVKEVTLKVNKR
YGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNYK
SVASNPKALREALSAPKIELLVLRKGFEFYIKVR
>gid:71  HP0068  urease accessory protein (ureG)
MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKN
SVMPRERIIGVETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESG
GDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLA
PYVGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED
>gid:92  HP0088  RNA polymerase sigma-70 factor (rpoD)
MKKKANEEKAQKRAKTEAKAEATQENKTKENNKAKESKIKESKIKEAKAK
EPIPVKKLSFNEALEELFANSLSDCVSYESIIQISAKVPTLAQIKKIKEL
CQKYQKKLVSSSEYAKKLNAIDKIKKTEEKQKVLDEELEDGYDFLKEKDF
LEWSRSDSPVRMYLREMGDIKLLSKDEEIELSKQIRLGEDIILDAICSVP
YLIDFIYAYKDALINRERRVKELFRSFDDDDENSVSDSKKDEDNEEDEEN
EERKKVVSEKDKKRVEKVQESFKALDKAKKEWLKALEAPIDEREDELVRS
LTLAYKRQTLKDRLYDLEPTSKLINELVKTMETTLKSGDGFEKELKRLEY
KLPLFNDTLIANHKKILANITNMTKEDIIAQVPEATMVSVYMDLKKLFLT
KEASEEGFDLAPNKLKEILEQIKRGKLISDRAKNKMAKSNLRLVVSIAKR
FTSRGLPFLDLIQEGNIGLMKAVDKFEHEKGFKFSTYATWWIKQAISRAI
ADQARTIRIPIHMIDTINRINKVMRKHIQENGKEPDLEVVAEEVGLSLDK
VKNVIKVTKEPISLETPVGNDDDGKFGDFVEDKNIVSSIDHIMREDLKAQ
IESVLDQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRERVRQIES
SAIKKLRSPQYGRILRNYLRI
>gid:116  HP0111  H. pylori predicted coding region HP0111
MVIDEIFQIMMLRRIKVGSNLNKKESLLDAFVKTYLQILEPISSKRLKEL
ADLKISCATIRNYFQILSKEGMLYQAHSSGARLPTFKAFENYWQKSLRFE
TLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSC
ALGYSVKMEKFLLELVGRSVKEVRSIAASFNALSLARQLERLEYSNTQIT
RFNLMGLKTLLNSPLFFDILGGKVLERLSKGLHFIEPDCMLVTRPVEFQN
KRMQLLCVGKLECDYEGFFQTISEEE
>gid:170  HP0166  response regulator (ompR)
MIEVLMIEDDIELAEFLSEFLLQHGIHVTNYDEPYTGISAANTQNYDLLL
LDLTLPNLDGLEVCRRISKQKHIPIIISSARSDVEDKIKALDYGADDYLP
KPYDPKELLARIQSLLRRSHKKEEVSEPGDANIFRVDKDSREVYMHEKKL
DLTRAEYEILSLLISKKGYVFSRESIAIESESINPESSNKSIDVIIGRLR
SKIEKNPKQPQYIISVRGIGYKLEY
>gid:178  HP0174  H. pylori predicted coding region HP0174
MRLNYPSKVSEEGFQVMVLSLSILKKSFNDFLSTRMLLINLGPILLSLAF
FGAVFYYNGGNIVGYCQTLLPQSLNDYSHSQGFFAGVFAWVFKALVYFLI
FWIVILLSLVINIFASIFYTPLVVSYLHQKYYPHVVLEEFGSILFSIKYF
LKSLAFMLLFLAVLTPFYFIPFIGVFGVFFSIVPHFLFFKNTMSLDIASM
IFNHQSYQNLLKQHRLKHYRFSFFCYLFSLIPFFNFFATLLQTLMLTHYF
FIFKEKEC
>gid:251  HP0247  ATP-dependent RNA helicase, DEAD-box family (deaD)
MELNQPPLPTEIDGDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKA
IPAVLQGRDVIAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELA
MQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLD
HLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSA
TMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVINEHERAEAIMR
LLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRSSI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGR
AGKKGMAITLVTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDA
KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPK
EKTPKPSNKKTPQHERARSFKKGQHRDRHPKTNHYSKKPKRR
>gid:362  HP0356  H. pylori predicted coding region HP0356
MAKHKNYEILNLIGYALAKFDNDFIKEFGFSTKNAFFEYCVQIGLADTTG
VIKNRMDLFDYFFPNKRKGWWQKGDAYIHRKLWIDSLFKDEDAKGFSHIV
KWFLQEQYGVKDLGITPNAYLKTRYKSMQETGLEAELYFLNHYKNIKIFS
CGHLKDMRLFGDGYDFYIQTNKQAFLVEVKGIREKQGTLRLTQKEYEQAQ
TYSHDYVLVVVLNLSEKPHLLSIANPLKHLEFKACERKQKSILEYHLIGQ
IK
>gid:419  HP0410  putative neuraminyllactose-binding hemagglutinin homolog (hpaA)
MKKGSLAIVLGSLLASGAFYTALADGMPAKQQHNNTGESVELHFHYPIKG
KQEPKNSHLVVLIEPKIEINKVIPESYQKEFEKSLFLQLSSFLERKGYSV
SQFKDASEIPQDIKEKALLVLRMDGNVAILEDIVEESDALSEEKVIDMSS
GYLNLNFVEPKSEDIIHSFGIDVSKIKAVIERVELRRTNSGGFVPKTFVH
RIKETDHDQAIRKIMNQAYHKVMVHITKELSKKHMEHYEKVSSEMKKRK
>gid:447  HP0432  protein kinase C-like protein
MELEEIVDSERNIHKTIEVLGKGGQGIVYRCLDKDVAIKVVLRDGDFIKD
KESLKQYEKSVLNLSFKPIESHFPMSIPLVTLKEKQGYVMKMAEGYEPLK
TFLKKPSILENEEKDGIFRINNAIQELCKDNHYMTLSLSYYSQTQGLRSR
LKILTHLAKLLFRLQSKGLVYGDLNLNNVFYKDNSAFLIDADNVRYESEK
ALCVIFTPNYGALEISQTSKNSDTTNYNTMLSDTFSFAIITYELLNMVHP
FDGNKADDSVENFIELPWIEDRKDDSNRSCGLLPFFLTRDLKNLLA
>gid:562  HP0550  transcription termination factor Rho (rho)
MNENAPTHKSSHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQE
FKRQDLMFEILKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHND
TYVSPSQIRRFALRNGDIVTGQVRSPKDQEKYYALLKIEAINYSPSDEIR
NRPLFDNLTPLFPDEQIKLEYEPTKVTGRMLDLFSPVGKGQRALIVAPPR
TGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQRSVKGQVFSST
FDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSS
GKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVI
FEEFKGTGNSEIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVW
VLRNVMQQMDDIEALSFVYSKMQQTKDNEEFLNLMNEK
>gid:626  HP0614  H. pylori predicted coding region HP0614
MMEHHKVHTTIQALQAKRKKLLTELAELEAEIKVSSERKSSFNISLSPSL
LAEIEEIEYEEKTSKERRINHSVLLSPSFMAKVDEYMKEKGFSNRSLLFE
KALEFYMLKHP
>gid:673  HP0662  ribonuclease III (rnc)
MMKNKRSQNSPYITPNSSYTTLEKALGYSFKDKRLLEQALTHKSCKLALN
NERLEFLGDAVLGLVIGELLYHKFYQYDEGKLSKLRASIVSAHGFTKLAK
AIALQDYLRVSSSEEISNGREKPSILSSAFEALMAGVYLEAGLAKVQKIM
QNLLNRAYKRLDLEHLFMDYKTALQELTQAQFCVIPTYQLLKEKGPDHHK
EFEMALYIQDKMYATAKGKSKKEAEQQCAYQALQKLKEAK
>gid:675  HP0664  H. pylori predicted coding region HP0664
MEKLPKKRVSKTKSQKLIHSLTTQKNRAFLKKISANEMLLELEKGAFKKN
EAYFISDEEDKNYVLVPDNVISLLAENARKAFEARLRAELERDIITQAPI
DFEDVREVSLQLLENLRQKDGNLPNINTLNFVKQIKKEHPNLFFNFDNMF
KQPPFNENNFENFDNSDEENF
>gid:723  HP0714  RNA polymerase sigma-54 factor (rpoN)
MAILRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIEN
KRIKNFSDRFSAKKSSDHLENFATASKSLFETLEAQIIPPLFPTETSQKI
AMDIISGLNNEGYFEENIEERARILGVESEVYEKVRKRFSYLNPAGIGAK
DVKESFLFQLESRELDDNELYEETRKIILNLEKHHEFSKDFYYEKALKIL
KSFKNPPAIEFLEKEIEVIPELFIVEVDNGIIVRLNDESYPTISLEENRF
KDSGYLKEKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKELRPL
KLLDLANEFNHSVSTISRAISNKYLACERGVFPIKHFFSIALDNSETSNA
VIKDYLLELIKNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNI
ASSSERKRLYLMRA
>gid:782  HP0775  penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT)
MNEIDKSVDIGFLRILDVIKKVTTPKGGIEILRTLIDFTPKIENALNLAA
KSHKGQYRKSGEPYIVHPICVASLVAFCGGDEAMVCAALLHDVVEDTPCK
IETIEQEFGQDVANLVDALTKITEIRKEELGVSSQDPRMVVSALTFRKIL
ISAIQDPRALVVKISDRLHNMLTLDALPHDKQVRISKETLAVYAPIASRL
GMSSIKNELEDKSFYYIYPEEYKNIKEYLHKNKQSLLLKLNAFASKLEKK
LFDSGFSHSDFKLVTRVKRPYSIYLKMQRKGAVNIDEILDLLAIRILLKN
PIDCYKVLGIIHLNFKPIVSRFKDYIALPKENGYKTIHTTIFDESSVYEV
QIRTFDMHMGAEYGNSAHWKYKAGGVDHEDHHEGMRWLQNFKYHDSDLKN
DPKEFYELAKNDLYREDIVVFSPHGDTYTLPVGAIALDFAYMVHSDLGDK
ATDAYINSKKALLNQELRSGDVVKIIKGDKIIPRFIWMDQLKTSKAKNHL
RIQRRNRLKEVDTKSMINILATFFGRSVFEDMDLKDYKNFEERLTDCGVE
TTLTEAMKSFENLAKLTEEIENKVFSLKEDAILEYQEMSLWTRGLRYLGF
KTNVLNFLAPNRQWQCKELEHFSVCSSNALEIKQVLLNDCCYPKYGDEII
AIVTDLKDPKAIAHHKFCKKAMAEVDAKVPMVYIEWHKRDRTIYKMMFYL
GEKKSVLAGLLTFLNRNECNIVGVSYLGYKDKYSSHCEVSFEIATDKADW
IRALINRKYQDRIVELSSLDDAYES
>gid:783  HP0776  H. pylori predicted coding region HP0776
MDRTQNKRISLKKERTESLVAQALKNIGNDRYMLDNLVFARVKQLNAGAK
TLVNMDPKRHKLVDIAIREIAEGKIDIDRIDERN
>gid:870  HP0862  H. pylori predicted coding region HP0862
MPARQSFTDLKNLVLCDIGNTRIHFAQNYQLFSSAKEDLKRLGIQKEIFY
ISVNEENEKALLNCYPNAKNIAGFFHLETDYVGLGIDRQMACLAVNNGVV
VDAGSAITIDLIKEGKHLGGCILPGLAQYIHAYKKSAKILEQPFKALDSL
EVLPKSTRDAVNYGMVLSVIACIQHLAKNQKIYLCGGDAKYLSAFLPHSV
CKERLVFDGMEIALKKAGILECK
>gid:874  HP0866  transcription elongation factor GreA (greA)
MNKEPMSMHGYNKICAELKQLKEVERPNIVKEIDIARGHGDLKENAEYHA
AKEKQRFIEARIVDLSEIVANAQVIDPSALAHNKVSFGSTIKILNLDNDK
EFSYTIVGSVESDPAKGLISFGSPIAKSLIGKSKGDAVSIQLPNGESDFE
ILDIYYKEICFDEN
>gid:909  HP0900  hydrogenase expression/formation protein (hypB)
MSEQRQESLQNNPNLSKKDVKIVEKILSKNDIKAAEMKERYLKEGLYVLN
FMSSPGSGKTTMLENLADFKDFKFCVVEGDLQTNRDADRLRKKGVSAHQI
TTGEACHLEASMIEGAFDLLKDEGALEKSDFLIIENVGNLVCPSSYNLGA
AMNIVLLSVPEGDDKVLKYPTMFMCADAVIISKADMVEVFNFRVSQVKED
MQKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF
>gid:942  HP0935  H. pylori predicted coding region HP0935
MTIKVFSPKYPTELEEFYAERIADNPLGFIQRLDLLPSISGFVQKLREHG
GEFFEMREGNKLIGICGLNPINQTEAELCKFHINSAYQSQGLGQKLYESV
EKYAFIKGYTKISLHVSKSQIKACNLYQKLGFVHIKEEDCVVELGEETLI
FPTLFMEKILS
>gid:1037  HP1025  putative heat shock protein (hspR)
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSQRD
MDKIKTILRLTRDMGVNLAGVDIILRLKEKLDELDNLNKELQDALHKHSK
NTKTPTKNLNTPTNFYELILFKK
>gid:1044  HP1032  alternative transcription initiation factor, sigma-F (fliA)
MILMMENRMPKGIQKTETSEKNIEKVLNAYDKQQHHHQDDLAIQYLPAVR
AMAFRLKERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRV
NGAMLDYLRSLDVISRSSRKLIKSIDIEITKHLNEHGKEPSDAYLAQTLG
ENIEKIKEAKTASDIYALVPIDEQFNAIEQDEITKKIEAEELLEHVQKAL
NQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRKSL
GVDHG
>gid:1055  HP1043  response regulator
MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMV
SDKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYR
SIKALVARIEARLRFWGSNVIEIGDLTISPDEEKIIYKGREVEVKGKPFE
VLTHLARHRDQIVSKEQLLDAIWEEPEMVTPNVIEVAINQIRQKMDKPLG
ISMVETVRRRGYRFCYPKPACEE
>gid:1061  HP1049  conserved hypothetical protein
MMGFLLRKTEIKIRMCVACRMRQPQKDLLRLKSFENQIMEFDGKGRSFYV
CGNCLKNGEKKLLKAVSKIKNAPKDTKNIITWIKERSIA
>gid:1151  HP1138  plasmid replication-partition related protein
MAKNKVLGRGLADIFPEINEVYEQGLYERANRVVELGIDEVMPNPYQPRK
VFSEDSLEELAQSIKEHGLLQPVLVVSENGRYHLIAGERRLRASKLAKMP
TIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEE
LSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLDGEKQ
ELILNSIIGQKLSVRQTEDLARDFKINANFDNKKHGFKQTQTLIAGDELE
RLNQSLWDHYKLKAALKGNKIVLRCYENSLLEAFMKKMMS
>gid:1213  HP1198  DNA-directed RNA polymerase, beta subunit (rpoB)
MSKKIPLKNRLRADFTKTPTDLEVPNLLLLQRDSYDSFLYSKEGKESGIE
KVFKSIFPIQDEHNRITLEYAGCEFGKSKYTVREAMERGITYSIPLKIKV
RLILWEKDTKSGEKNGIKDIKEQSIFIREIPLMTERTSFIINGVERVVVN
QLHRSPGVIFKEEESSTSLNKLIYTGQIIPDRGSWLYFEYDSKDVLYARI
NKRRKVPVTILFRAMDYQKQDIIKMFYPLVKVRYENDKYLIPFASLDANQ
RMEFDLKDPQGKVILLAGKKLTSRKIKELKENHLEWVEYPMDILLNRHLA
EPVMVGKEVLLDMLTQLDKNKLEKIHDLGVQEFVIINDLALGHDASIIQS
FSADSESLKLLKQTEKIDDENALAAIRIHKVMKPGDPVTTEVAKQFVKKL
FFDPERYDLTMVGRMKMNHKLGLHVPDYITTLTHEDIITTVKYLMKIKNN
QGKIDDRDHLGNRRIRAVGELLANELHSGLVKMQKTIKDKLTTMSGAFDS
LMPHDLVNSKMITSTIMEFFMGGQLSQFMDQTNPLSEVTHKRRLSALGEG
GLVKDRVGFEARDVHPTHYGRICPIETPEGQNIGLINTLSTFTRVNDLGF
IEAPYKKVVDGKVVGETIYLTAIQEDSHIIAPASTPIDEEGNILGDLIET
RVEGEIVLNEKSKVTLMDLSSSMLVGVAASLIPFLEHDDANRALMGTNMQ
RQAVPLLRSDAPIVGTGIEKIIARDSWGAIKANRAGVVEKIDSKNIYILG
ESKEEAYIDAYSLQKNLRTNQNTSFNQVPIVKVGDKVGAGQIIADGPSMD
RGELALGKNVRVAFMPWNGYNFEDAIVVSECITKDDIFTSTHIYEKEVDA
RELKHGVEEFTADIPDVKEEALAHLDESGIVKVGTYVSAGMILVGKTSPK
GEIKSTPEERLLRAIFGDKAGHVVNKSLYCPPSLEGTVIDVKVFTKKGYE
KDARVLSAYEEEKAKLDMEHFDRLTMLNREELLRVSSLLSQAILEEPFSH
NGKDYKEGDQIPKEEIASINRFTLASLVKKYSKEVQNHYEITKNNFLEQK
KVLGEEHEEKLSILEKDDILPNGVIKKVKLYIATKRKLKVGDKMAGRHGN
KGIVSNIVPVADMPYTADGEPVDIVLNPLGVPSRMNIGQILEMHLGLVGK
EFGKQIARMLEDKTKDFAKELRAKMLEIANAINEKDPLTIHALENCSDEE
LLEYAKDWSKGVKMAIPVFEGISQEKFYKLFELAKIAMDGKMDLYDGRTG
EKMRERVNVGYMYMIKLHHLVDEKVHARSTGPYSLVTHQPVGGKALFGGQ
RFGEMEVWALEAYGAAHTLKEMLTIKSDDIRGRENAYRAIAKGEQVGESE
IPETFYVLTKELQSLALDINIFGDDVDEDGAPKPIVIKEDDRPKDFSSFQ
LTLASPEKIHSWSYGEVKKPETINYRTLKPERDGLFCMKIFGPTKDYECL
CGKYKKPRFKDIGTCEKCGVAITHSKVRRFRMGHIELATPVAHIWYVNSL
PSRIGTLLGVKMKDLERVLYYEAYIVKEPGEAAYDNEGTKLVMKYDILNE
EQYQNISRRYEDRGFVAQMGGEAIKDLLEEIDLITLLQSLKEEVKDTNSD
AKKKKLIKRLKVVESFLNSGNRPEWMMLTVLPVLPPDLRPLVALDGGKFA
VSDVNELYRRVINRNQRLKRLMELGAPEIIVRNEKRMLQEAVDVLFDNGR
STNAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPNL
KMDECGLPKNMALELFKPHLLSKLEERGYATTLKQAKRMIEQKSNEVWEC
LQEITEGYPVLLNRAPTLHKQSIQAFHPKLIDGKAIQLHPLVCSAFNADF
DGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKAVAIPSQDMVLGLY
YLSLEKSGVKGEHKLFSSVNEIITAIDTKELDIHAKIRVLDQGNIIATSA
GRMIIKSILPDFIPTDLWNRPMKKKDIGVLVDYVHKVGGIGITATFLDNL
KTLGFRYATKAGISISMEDIITPKDKQKMVEKAKVEVKKIQQQYDQGLLT
DQERYNKIIDTWTEVNDKMSKEMMTAIAQDKEGFNSIYMMADSGARGSAA
QIRQLSAMRGLMTKPDGSIIETPIISNFKEGLNVLEYFNSTHGARKGLAD
TALKTANAGYLTRKLIDVSQNVKVVSDDCGTHEGIEITDIAVGSELIEPL
EERIFGRVLLEDVIDPITNEILLYADTLIDEEGAKKVVEAGIKSITIRTP
VTCKAPKGVCAKCYGLNLGEGKMSYPGEAVGVVAAQSIGEPGTQLTLRTF
HVGGTASRSQDEREIVASKEGFVRFYNLRTYTNKEGKNIIANRRNASILV
VEPKIKAPFDGELRIETVYEEVVVSVKNGDQEAKFVLRRSDIVKPSELAG
VGGKIEGKVYLPYASGHKVHKGGSIADIIQEGWNVPNRIPYASELLVKDN
DPIAQDVYAKEKGVIKYYVLEANHLERTHGIKKGDMVSEKGLFAVIADDN
GREAARHYIARGSEILIDDNSEVSTNSVISKPTTNTFKTIATWDPYNTPI
IADFKGKVGFVDVIAGVTVAEKEDENTGITSLVVNDYIPSGYKPSLFLEG
ANGEEMRYFLEPKTSIAISDGSSVEQAEVLAKIPKATVKSRDITGGLPRV
SELFEARKPKPKDVAILSEVDGIVSFGKPIRNKEHIIVTSKDGRSMDYFV
DKGKQILVHADEFVHAGEAMTDGVISSHDILRISGEKELYKYIVSEVQQV
YRRQGVSIADKHIEIIVSQMLRQVRILDSGDSKFIEGDLVSKKLFKEENA
RVIALKGEPAIAEPVLLGITRAAIGSDSIISAASFQETTKVLTEASIAMK
KDFLEDLKENVVLGRMIPVGTGMYKNKKIVLRALEDNSKF
>gid:1218  HP1203  transcription termination factor NusG (nusG)
MMDWYAIQTYSGSEQSVKKAIENLANDHNIRDRIQEIIVPTEDIIEVSKK
SKTKVTERSLYPGYVFIKVDLDTVLWHKIQSLPRVSRFIGENKKPTPLSE
ADIGHILEKMNNRAAPKPKIFFEQGEVVRVVEGPFANFTATVEEYDVEHR
KLKLNVSIFGRNTPIEILHSQVEKII
>gid:1270  HP1248  virulence associated protein homolog (vacB)
MQGFLRSLFFGVKKIPKPFAPLVEKGVLKEALELKKDRYFLKEGFDIGKV
EKVKDKAFFISLAKNYPKDPLIKNLPPSFKTDALILCQIECSKKRPIAFF
KAALLNADHTMIAYLAKKNNQIVAIPFKEPFKKPVSLKHSQKSLLELPRH
CVVKIDTKKREISEILGALEDPLIDENLSLSLFDRVKDFSKDCLNLAQHY
AQLKASDFKDRINYSHIPFITIDPKDAKDFDDAIFYDQEKRVLFVAVADV
SEFVPKHSSLDKEARVRGFSVYFPNSVYPMLPLSLSQGACSLKAFEKRLA
LVYEIPLDNLKNARLSQGVIEVRANCTYEEINHFLSANQSSLDKDLQQSL
LGFLEMALKLKKERLKKGFNFNSFENKLYLNKEGRIEKIETEKESDAHTL
IEEAMLLANQSSARLLDEHFHNKGIYRTHKEPSLEQQKRLYDKLFDYEIV
RPKNMGFFPFLEHALKIAKEKSIEREVSRLIIKSQNLALYSPLQESHFGL
GFASYTHFTSPIRRYSDLALHRLLKELLFYQAKGCSYLLEETPELCAELN
ALQKKAALIERDFIKRKFARLALELLEKEFLGVVLEVKDWVVVGLKEFIG
LKVLVKTNKVFKPLEKVRVTITHADLILGQVRGEITERIKEHVS
>gid:1281  HP1259  conserved hypothetical protein
MACGKGHDIMEVASPYGWKKNPQKVLDFYNQRRRQLFEVYPNKAHKALAE
LEKHYQVNIITQNVDDLHERAGSSRILHLHGELLSVRSEKDPNLVYRWEK
DLNLGDLAKDKSQLRPDIVWFGEAVPLLKEAISLVKQAHLLIIIGTSLQV
YPAASLYTHAHKDALIYYIDPKAKNAHLPQNVQCINESAVHAMQDLMPKL
IEMAS
>gid:1308  HP1287  transcriptional regulator (tenA)
MQVSQYLYQNVQSIWGDCISHPFVQGIGRGTLERDKFRFYIIQDYLFLLE
YAKVFALGVVKACDEAVMREFSNAIQDILNNEMSIHNHYIRGLQITQKEL
QNARPTLANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSYLVIAQNLSQIP
NALEHAFYGHWIKGYSSKEFQACVNWNINLLDSLTLTSSKQEIEKLKDIF
ITTSEYEYLFWDMAYQS
>gid:1314  HP1293  DNA-directed RNA polymerase, alpha subunit (rpoA)
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLS
SVGYAPVGLKIEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDS
SLENQSVVVDYSFKGPMELRARDLNSEQIEIVNPEMPLATINEDAQLNFS
LIIYKGMGYVPSENTRELMPEGYMPLDGSFTPIKKVVYEIENVLVEGDPN
YEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIANTEYSGDYAQ
RDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
>gid:1359  HP1338  conserved hypothetical protein
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLV
EDNWAEDNPNDESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHI
HMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASSFEYNE
>gid:1385  HP1365  response regulator
MQKKIFLLEDDYLLSESVKEFLEHLGYEVFCAFNGKEAYERLSVERFNLL
LLDVQVPEMNSLELFKRIKNDFLISTPVIFITALQDNATLKNAFNLGASD
YLKKPFDLDELEARIKRFFNDDPIEIMPNIFYHQNCLSVRGKKEILPPKT
AQLLEYFLEHKGQIISSQALENNLWEQAIDDSTLRTYIKVLRKLLGKNCI
ETHKGVGYRFNPL
>gid:1411  HP1392  fibronectin/fibrinogen-binding protein
MKFFLLKKFSEFLNAQTHFSLKRLNASSFLLETFSKEKHAFVVDLSAPYI
GLSKKPPESVLKNTLALDFCLNKFTRNAKILQANIIDNDRILEINGAKDL
AYKSENFILRLEMIPKKANLMILDKEKCVIEAFRFNDRVAKNDILGALPP
NIYEHQEEDLDFKGLLDILEKDFLFYQHKELEHKKNQIIKRLNAQKERLK
EKLEKLEDPKNLQLEAKELQTQASLLLTYQHLIHKHESRVVLKDFEDKER
AIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQIN
YVKGAQEESVLEMFMPSKNSKIKRPMSGYEVLYYKDFKIGLGKNQKENIK
LLQDARANDLWMHVRNIPGSHLIVFCQKNAPKDDVIMELAKMLIKMQKDA
FNSYEIDYTQRKFVKIIKGANVIYSKYRTISLKDT
>gid:1535  HP1514  transcription termination factor NusA (nusA)
MEKISDLIECIAYEKNLPKEMISKVIQGCLLKMAQNELDPLARYLVVEEN
KQLQLIQLVEVLEDGDERLVNDPSKYISLSKAKEMDPSVKIKDELSYSLS
LESMKQGAINRLFKDLQYQLEKALEDSHFEAFQKRLNSVLMGQVILVDHN
QNTFIEIEQQFQGVLSMRHRIKGESFKVGDSIKAVLTQVKRTKKGLLLEL
SRTTPKMLEALLELEVPEIKDKEIEIIHCARIPGNRAKVSFFSHNARIDP
IGAAVGVKGVRINAISNELNKENIDCIEYSNVPEIYITLALAPAKILSVE
IKKIPIEELNAEEKESIQERFIVNNHLQKAKVRLLDIEKSKAIGKGGVNV
CLASMLTGYHIEFETIPSVKENAENESEKETPKVGVEALESLFKN
>gid:1543  HP1523  DNA recombinase (recG)
MQETDNLLKTLNVKSLLEALLVYTPKGYKDLNLLERFETGLSGVLEVGIL
EKRNYAKVLKIFAYSKRFYKNLELVFFNYSAFHHSQFKTGESLFIYGKLE
QSSFNQAYIINTPKIITKFGKISLIFKKVKNHKKIQENLQKLISLENLKK
EGVKENIAHLLLEIFFPTPHFVKDFETNKNFPSQHLNALKYIEMLFYMKN
LERKKLQFGAKIACPNNNERLKAFIASLPFKLTRDQQNAIKEIQNDLTSS
IACKRLIIGDVGCGKTMVILASMVLTYPNKTLLMAPTSILAKQLYNEALK
FLPPYFEVELLLGGSYKKRSNHLFETITHVVIGTQALLFDKRDLNEFALV
ITDEQHRFGTKQRYQLEKMASSKGNKPHSLQFSATPIPRTLALAKSAFVK
TTMIREIPYPKEIETLVLHKRDFKIVMEKISEEIAKNHQVIVVYPLVNES
EKIPYLSLSEGASFWQKRFKKVYTTSGQDKNKEEVIEEFRESGSILLATT
LIEVGISLPRLSVMVILAPERLGLATLHQLRGRVSRNGLKGYCFLCTIQE
ENERLEKFADELDGFKIAELDLEYRKSGDLLQGGEQSGNSFEYIDLAKDE
NIIAEVKRDFLKAASVSRGTFEN
>gid:1548  HP1527  H. pylori predicted coding region HP1527
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQV
LGVYNISPHKKLTLTITHISTAIVYQPLDEKLSLETTLNPNRPTIPRNTQ
IVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSK
NSKNSLLQPLAIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPT
EKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFACGKWVYDDEN
LQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTE
PLEEPQTFEAKNNFAILQARSSTEKCKRARARKDGTTRQCYLIEEPLKQA
WESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEE
QPRAKSTPLSIENSRVVCVKKGNYLFNEV
>gid:1561  HP1541  transcription-repair coupling factor (trcF)
MIQSSLYRALNKGFDYQILACKDFKESELAKEVISYFKPNTKAILFPEFR
AKKNDDLRSFFEEFLQLLGGLREFYQALENKQETIIIAPISALLHPLPKK
ELLESFKITLLEKYNLKDLKDKLFYYGYEILDLVEVEGEASFRGDIVDIY
APNSKAYRLSFFDTECESIKEFDPITQMSLKEDLLEIEIPPTLFSLDESS
YKDLKTKVEQSPLNSFSKDLTSFGLWFLGEKAQDLLIVYKSIISPRALEE
IQELASLNELDCERFKFLKVLENAQGYEDLEIHAHALEGFIALHSNHKIT
LLAPNKTILDNAISALDAGNMECVIAPFVLNFKTPDGIFISLNSFERKKK
RQKSKLALNELNPGEWVVHDDYGVGVFSQLVQHSVLGSKRDFLEIAYLGE
DKLLLPVENLHLIARYVAQSDSVPAKDRLGKGSFLKLKAKVRTKLLEIAS
KIIELAAERNLILGKKMDVHLAELEVFKSHAGFEYTSDQEKAIAEISKDL
SSHRVMDRLLSGDVGFGKTEVAMHAIFCAFLNGFQSALVVPTTLLAHQHF
ETLRARFENFGVKVARLDRYASEKNKLLKAVELGQVDALIGTHAILGAKF
KNLGLVVVDEEHKFGVKQKEALKELSKSVHFLSMSATPIPRTLNMALSQI
KGISSLKTPPTDRKPSRTFLKEKNDELLKEIIYRELRRNGQIFYIHNHIA
SILKVKTKLEDLIPKLKIAILHSQINANESEEIMLEFAKGNYQVLLCTSI
VESGIHLPNANTIIIDNAQNFGLADLHQLRGRVGRGKKEGFCYFLIEDQK
SLNEQALKRLLALEKNSYLGSGESVAYHDLEIRGGGNLLGQDQSGHIKNI
GYALYTRMLEDAIYELSGGKKRLEKSVEIQLGVSAFLNPELIASDSLRLD
LYRRLSLCENTDEVGQIHEEIEDRFGKIDDLSAQFLQIITLKILANQLGI
IKLSNFNQNITITYSDEKKESLKAPSKDDNDILETLLKHLRAQISLKRR