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2024-05-17 09:34:44

Gene list

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COG category: Transcription
Organism: Helicobacter pylori 26695, 26695

Number of genes found: 40

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Helicobacter pylori 26695, 26695
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HP0001 H. pylori predicted coding region HP0001RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS217 417 - 0.410072
HP0036 H. pylori predicted coding region HP0036SubName: Full=Uncharacterized protein; chromosome CDS35544 1005 + 0.39403
HP0068 urease accessory protein (ureG)RecName: Full=Urease accessory protein UreG; chromosome CDS72818 600 - 0.448333
HP0088 RNA polymerase sigma-70 factor (rpoD)RecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS92952 2016 - 0.390873
HP0111 H. pylori predicted coding region HP0111RecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS118823 831 - 0.385078
HP0166 response regulator (ompR)SubName: Full=Response regulator; SubName: Full=Response regulator (OmpR); chromosome CDS173778 678 - 0.384956
HP0174 H. pylori predicted coding region HP0174SubName: Full=Uncharacterized protein; chromosome CDS180658 777 - 0.330759
HP0247 ATP-dependent RNA helicase, DEAD-box family (deaD)SubName: Full=ATP-dependent RNA helicase, DEAD-box family (DeaD); SubName: Full=DEAD/DEAH box helicase; chromosome CDS255585 1479 + 0.43002
HP0356 H. pylori predicted coding region HP0356SubName: Full=Uncharacterized protein; chromosome CDS366226 759 + 0.347826
HP0410 putative neuraminyllactose-binding hemagglutinin homolog (hpaA)SubName: Full=Neuraminyllactose-binding hemagglutinin HpaA; SubName: Full=Putative neuraminyllactose-binding hemagglutinin homolog (HpaA); chromosome CDS423743 750 + 0.38
HP0432 protein kinase C-like proteinSubName: Full=Protein kinase C-like protein; chromosome CDS450804 891 + 0.337823
HP0550 transcription termination factor Rho (rho)RecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS585388 1317 - 0.431283
HP0614 H. pylori predicted coding region HP0614SubName: Full=Uncharacterized protein; chromosome CDS658630 336 - 0.386905
HP0662 ribonuclease III (rnc)RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS709973 723 + 0.399723
HP0664 H. pylori predicted coding region HP0664RecName: Full=UPF0763 protein HP_0664; chromosome CDS711827 516 + 0.333333
HP0714 RNA polymerase sigma-54 factor (rpoN)RecName: Full=RNA polymerase sigma-54 factor; chromosome CDS768089 1245 - 0.360643
HP0775 penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT)SubName: Full=Penta-phosphate guanosine-3-pyrophosphohydrolase (SpoT); chromosome CDS827702 2328 - 0.389175
HP0776 H. pylori predicted coding region HP0776RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS830016 255 - 0.368627
HP0862 H. pylori predicted coding region HP0862RecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS914534 672 - 0.39881
HP0866 transcription elongation factor GreA (greA)RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS917923 495 - 0.381818
HP0900 hydrogenase expression/formation protein (hypB)RecName: Full=Hydrogenase/urease nickel incorporation protein HypB; chromosome CDS952091 729 - 0.397805
HP0935 H. pylori predicted coding region HP0935SubName: Full=Uncharacterized protein; chromosome CDS995544 486 + 0.417695
HP1025 putative heat shock protein (hspR)SubName: Full=Putative heat shock protein; SubName: Full=Putative heat shock protein (HspR); chromosome CDS1088509 372 + 0.395161
HP1032 alternative transcription initiation factor, sigma-F (fliA)SubName: Full=Alternative transcription initiation factor, sigma-F (FliA); SubName: Full=Flagellar biosynthesis sigma factor; chromosome CDS1093667 768 - 0.384115
HP1043 response regulatorSubName: Full=Response regulator; chromosome CDS1104745 672 - 0.410714
HP1049 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1112778 270 - 0.362963
HP1138 plasmid replication-partition related proteinRecName: Full=Probable chromosome-partitioning protein ParB; chromosome CDS1199764 873 - 0.389462
HP1198 DNA-directed RNA polymerase, beta subunit (rpoB)RecName: Full=Bifunctional DNA-directed RNA polymerase subunit beta-beta; EC=2.7.7.6; Includes: RecName: Full=DNA-directed RNA polymerase subunit beta; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; Includes: RecName: Full=DNA-directed RNA polymerase subunit beta; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1268377 8673 - 0.435374
HP1203 transcription termination factor NusG (nusG)RecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS1279491 531 - 0.399247
HP1248 virulence associated protein homolog (vacB)RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; AltName: Full=VacB protein homolog; chromosome CDS1322761 1935 - 0.376744
HP1259 conserved hypothetical proteinRecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS1333094 618 + 0.432039
HP1287 transcriptional regulator (tenA)SubName: Full=TenA transcriptional regulator; SubName: Full=Transcriptional regulator (TenA); chromosome CDS1363131 654 - 0.382263
HP1293 DNA-directed RNA polymerase, alpha subunit (rpoA)RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1367722 1035 - 0.415459
HP1338 conserved hypothetical proteinRecName: Full=Putative nickel-responsive regulator; chromosome CDS1398327 447 - 0.409396
HP1365 response regulatorSubName: Full=Response regulator; chromosome CDS1426963 642 - 0.38785
HP1392 fibronectin/fibrinogen-binding proteinSubName: Full=Fibronectin/fibrinogen-binding protein; chromosome CDS1452072 1308 - 0.324159
HP1514 transcription termination factor NusA (nusA)RecName: Full=Transcription termination/antitermination protein NusA; chromosome CDS1588569 1188 + 0.403199
HP1523 DNA recombinase (recG)RecName: Full=ATP-dependent DNA helicase RecG; EC=3.6.4.12; chromosome CDS1602088 1872 - 0.379274
HP1527 H. pylori predicted coding region HP1527SubName: Full=Uncharacterized protein; chromosome CDS1605956 1440 - 0.388889
HP1541 transcription-repair coupling factor (trcF)RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1618609 3000 - 0.400333