Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome
Number of genes found: 161
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Enterococcus faecalis V583, V583 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | EF0115 | endoribonuclease L-PSP, putative | chromosome | CDS | 120325 | 1269 | + | 0.433412 |
NA | EF2400 | RNA methyltransferase, TrmH family | chromosome | CDS | 2323486 | 777 | - | 0.384813 |
NA | EF0350 | conserved hypothetical protein | chromosome | CDS | 321410 | 1086 | + | 0.357274 |
NA | EF2894 | general stress protein 13, putative | chromosome | CDS | 2774510 | 369 | - | 0.352304 |
NA | EF2665 | RNA methyltransferase, TrmH family | chromosome | CDS | 2577498 | 507 | - | 0.366864 |
NA | EF1163 | L-asparaginase, putative | chromosome | CDS | 1134765 | 966 | + | 0.405797 |
NA | EF0170 | conserved hypothetical protein | chromosome | CDS | 167919 | 609 | + | 0.43514 |
NA | EF2983 | glutamyl-tRNA(Gln) amidotransferase, A subunit, putative | chromosome | CDS | 2856407 | 1449 | - | 0.456867 |
NA | EF2872 | conserved hypothetical protein TIGR00253 | chromosome | CDS | 2752214 | 312 | - | 0.349359 |
NA | EF1377 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 1353068 | 1350 | + | 0.359259 |
NA | EF0737 | amidase, putative | chromosome | CDS | 694216 | 1587 | + | 0.400126 |
NA | EF1470 | conserved hypothetical protein | chromosome | CDS | 1429546 | 399 | + | 0.35589 |
NA | EF1548 | ribosomal protein S1 | chromosome | CDS | 1502243 | 1212 | + | 0.388614 |
NA | EF1937 | conserved hypothetical protein | chromosome | CDS | 1877279 | 537 | - | 0.396648 |
NA | EF0259 | S4 RNA-binding domain protein | chromosome | CDS | 238338 | 264 | + | 0.348485 |
NA | EF2307 | conserved hypothetical protein | chromosome | CDS | 2223189 | 9522 | - | 0.560071 |
NA | EF3079 | acetyltransferase, GNAT family | chromosome | CDS | 2953380 | 558 | - | 0.399642 |
NA | EF0030 | endoribonuclease L-PSP, putative | chromosome | CDS | 31430 | 381 | + | 0.383202 |
NA | EF0145 | hypothetical protein | chromosome | CDS | 142958 | 306 | + | 0.343137 |
NA | EF1437 | hypothetical protein | chromosome | CDS | 1410077 | 750 | + | 0.366667 |
NA | EF1273 | ribosomal protein L7A family | chromosome | CDS | 1241875 | 306 | + | 0.392157 |
NA | EF0531 | hypothetical protein | chromosome | CDS | 491277 | 417 | + | 0.22542 |
NA | EF2228 | tryptophanyl-tRNA synthetase | chromosome | CDS | 2147986 | 1005 | - | 0.383085 |
NA | EF0853 | hypothetical protein | chromosome | CDS | 811557 | 327 | + | 0.376147 |
NA | EF1432 | hypothetical protein | chromosome | CDS | 1406481 | 1188 | + | 0.372896 |
NA | EF0545 | conserved domain protein | chromosome | CDS | 501514 | 387 | + | 0.273902 |
NA | EF2143 | conserved hypothetical protein | chromosome | CDS | 2045470 | 468 | + | 0.309829 |
NA | EF0262 | S1 RNA-binding domain protein | chromosome | CDS | 239380 | 480 | + | 0.40625 |
NA | EF2706 | RNA methyltransferase, TrmA family | chromosome | CDS | 2619582 | 1371 | + | 0.375638 |
NA | EF0697 | conserved hypothetical protein | chromosome | CDS | 651094 | 534 | + | 0.368914 |
NA | EF3207 | dihydrouridine synthase family protein | chromosome | CDS | 3077202 | 975 | - | 0.448205 |
NA | EF2552 | Sua5/YciO/YrdC/YwlC family protein | chromosome | CDS | 2465321 | 1023 | - | 0.420332 |
NA | EF0047 | RNA methyltransferase, TrmH family | chromosome | CDS | 50032 | 849 | + | 0.42874 |
NA | EF0728 | RNA methyltransferase, TrmA family | chromosome | CDS | 686280 | 1374 | + | 0.379913 |
NA | EF0678 | acetyltransferase, GNAT family | chromosome | CDS | 630800 | 555 | + | 0.351351 |
NA | EF1009 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 967965 | 1302 | + | 0.396313 |
NA | EF2814 | hypothetical protein | chromosome | CDS | 2713945 | 456 | - | 0.335526 |
NA | EF3296 | GTP-binding protein, GTP1/OBG family | chromosome | CDS | 3178675 | 1116 | - | 0.40681 |
NA | EF0502 | membrane protein, putative | chromosome | CDS | 465423 | 2346 | + | 0.366155 |
NA | EF2022 | conserved domain protein | chromosome | CDS | 1950785 | 924 | - | 0.291126 |
NA | EF2537 | hypothetical protein | chromosome | CDS | 2457192 | 240 | - | 0.304167 |
NA | EF0267 | zinc-binding TIM-barrel protein, nifR3 family, putative | chromosome | CDS | 245217 | 999 | + | 0.413413 |
NA | EF1973 | conserved hypothetical protein TIGR00256 | chromosome | CDS | 1910521 | 447 | - | 0.400447 |
NA | EF0969 | conserved hypothetical protein | chromosome | CDS | 931656 | 345 | + | 0.382609 |
NA | EF2574 | endoribonuclease L-PSP, putative | chromosome | CDS | 2489785 | 381 | - | 0.367454 |
NA | EF0846 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 805108 | 1611 | + | 0.414029 |
NA | EF2206 | cytidine/deoxycytidylate deaminase family protein | chromosome | CDS | 2119416 | 522 | - | 0.413793 |
alaS | EF1379 | alanyl-tRNA synthetase | chromosome | CDS | 1355993 | 2643 | + | 0.387817 |
argS | EF2471 | arginyl-tRNA synthetase | chromosome | CDS | 2392021 | 1692 | - | 0.353428 |
asnS | EF2371 | asparaginyl-tRNA synthetase | chromosome | CDS | 2291957 | 1353 | - | 0.373245 |
aspS | EF1970 | aspartyl-tRNA synthetase | chromosome | CDS | 1907075 | 1770 | - | 0.39548 |
cysS | EF0045 | cysteinyl-tRNA synthetase | chromosome | CDS | 48235 | 1413 | + | 0.404812 |
def-1 | EF3066 | polypeptide deformylase | chromosome | CDS | 2938139 | 564 | + | 0.391844 |
efp | EF0287 | translation elongation factor P | chromosome | CDS | 272436 | 561 | + | 0.352941 |
fmt | EF3123 | methionyl-tRNA formyltransferase | chromosome | CDS | 2999197 | 942 | - | 0.416136 |
frr | EF2395 | ribosome recycling factor | chromosome | CDS | 2319528 | 558 | - | 0.37276 |
fusA | EF0200 | translation elongation factor G | chromosome | CDS | 192286 | 2082 | + | 0.404899 |
gatA | EF0725 | glutamyl-tRNA(Gln) amidotransferase, A subunit | chromosome | CDS | 682074 | 1470 | + | 0.393878 |
gatB | EF0726 | glutamyl-tRNA(Gln) amidotransferase, B subunit | chromosome | CDS | 683543 | 1431 | + | 0.389937 |
gatC | EF0724 | glutamyl-tRNA(Gln) amidotransferase, C subunit | chromosome | CDS | 681769 | 306 | + | 0.382353 |
gid | EF1649 | glucose-inhibited division protein | chromosome | CDS | 1601182 | 1308 | - | 0.396024 |
gltX | EF0043 | glutamyl-tRNA synthetase | chromosome | CDS | 45976 | 1458 | + | 0.388889 |
glyQ | EF2407 | glycyl-tRNA synthetase, alpha subunit | chromosome | CDS | 2328093 | 909 | - | 0.379538 |
glyS | EF2406 | glycyl-tRNA synthetase, beta subunit | chromosome | CDS | 2326007 | 2085 | - | 0.367866 |
hemK | EF2553 | hemK protein | chromosome | CDS | 2466387 | 834 | - | 0.408873 |
hisS | EF1971 | histidyl-tRNA synthetase | chromosome | CDS | 1908862 | 1302 | - | 0.388633 |
ileS | EF1003 | isoleucyl-tRNA synthetase | chromosome | CDS | 960336 | 2781 | + | 0.380798 |
infA | EF0229 | translation initiation factor IF-1 | chromosome | CDS | 210095 | 219 | + | 0.388128 |
infB | EF1274 | translation initiation factor IF-2 | chromosome | CDS | 1242193 | 2397 | + | 0.400918 |
infC | EF0914 | translation initiation factor IF-3 | chromosome | CDS | 880755 | 522 | + | 0.421456 |
ksgA | EF0936 | dimethyladenosine transferase | chromosome | CDS | 900114 | 888 | + | 0.376126 |
leuS | EF0801 | leucyl-tRNA synthetase | chromosome | CDS | 761593 | 2415 | + | 0.390062 |
lysS | EF0268 | lysyl-tRNA synthetase | chromosome | CDS | 246309 | 1497 | + | 0.39479 |
map | EF2200 | methionine aminopeptidase, type I | chromosome | CDS | 2114410 | 765 | - | 0.403922 |
miaA | EF2162 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 2069886 | 930 | - | 0.396774 |
papS | EF1558 | poly A polymerase | chromosome | CDS | 1510788 | 1221 | + | 0.396396 |
pheS | EF1115 | phenylalanyl-tRNA synthetase, alpha subunit | chromosome | CDS | 1087895 | 1047 | + | 0.38873 |
pnpA | EF3064 | polyribonucleotide nucleotidyltransferase | chromosome | CDS | 2935289 | 2115 | - | 0.398582 |
prfA | EF2554 | peptide chain release factor 1 | chromosome | CDS | 2467213 | 1074 | - | 0.400372 |
prfC | EF0701 | peptide chain release factor 3 | chromosome | CDS | 655165 | 1575 | + | 0.40254 |
prmA | EF1976 | ribosomal protein L11 methyltransferase | chromosome | CDS | 1914173 | 948 | - | 0.400844 |
proS | EF2379 | prolyl-tRNA synthetase | chromosome | CDS | 2305935 | 1719 | - | 0.387435 |
pth | EF0256 | peptidyl-tRNA hydrolase | chromosome | CDS | 232593 | 567 | + | 0.365079 |
queA | EF0868 | S-adenosylmethionine:tRNAribosyltransferase-isom erase | chromosome | CDS | 827433 | 1032 | + | 0.385659 |
rbfA | EF1275 | ribosome-binding factor A | chromosome | CDS | 1244614 | 351 | + | 0.390313 |
rimM | EF1900 | 16S rRNA processing protein RimM | chromosome | CDS | 1844274 | 525 | - | 0.367619 |
rnpA | EF3332 | ribonuclease P protein component | chromosome | CDS | 3216873 | 357 | - | 0.369748 |
rplA | EF2718 | ribosomal protein L1 | chromosome | CDS | 2629818 | 690 | - | 0.394203 |
rplB | EF0209 | ribosomal protein L2 | chromosome | CDS | 200436 | 831 | + | 0.43201 |
rplC | EF0206 | ribosomal protein L3 | chromosome | CDS | 198828 | 630 | + | 0.406349 |
rplD | EF0207 | ribosomal protein L4 | chromosome | CDS | 199483 | 624 | + | 0.402244 |
rplE | EF0218 | ribosomal protein L5 | chromosome | CDS | 204383 | 540 | + | 0.366667 |
rplF | EF0221 | ribosomal protein L6 | chromosome | CDS | 205592 | 537 | + | 0.402235 |
rplI | EF0012 | ribosomal protein L9 | chromosome | CDS | 12715 | 453 | + | 0.366446 |
rplJ | EF2716 | ribosomal protein L10 | chromosome | CDS | 2628995 | 501 | - | 0.421158 |
rplK | EF2719 | ribosomal protein L11 | chromosome | CDS | 2630619 | 423 | - | 0.408983 |
rplL | EF2715 | ribosomal protein L7/L12 | chromosome | CDS | 2628564 | 369 | - | 0.403794 |
rplN | EF0216 | ribosomal protein L14 | chromosome | CDS | 203642 | 369 | + | 0.433604 |
rplO | EF0226 | ribosomal protein L15 | chromosome | CDS | 207408 | 441 | + | 0.414966 |
rplP | EF0213 | ribosomal protein L16 | chromosome | CDS | 202682 | 435 | + | 0.436782 |
rplQ | EF0234 | ribosomal protein L17 | chromosome | CDS | 212357 | 384 | + | 0.411458 |
rplR | EF0223 | ribosomal protein L18 | chromosome | CDS | 206289 | 357 | + | 0.442577 |
rplS | EF1898 | ribosomal protein L19 | chromosome | CDS | 1843053 | 348 | - | 0.425287 |
rplT | EF0916 | ribosomal protein L20 | chromosome | CDS | 881651 | 360 | + | 0.391667 |
rplU | EF0968 | ribosomal protein L21 | chromosome | CDS | 931315 | 309 | + | 0.398058 |
rplV | EF0211 | ribosomal protein L22 | chromosome | CDS | 201609 | 348 | + | 0.390805 |
rplW | EF0208 | ribosomal protein L23 | chromosome | CDS | 200106 | 291 | + | 0.357388 |
rplX | EF0217 | ribosomal protein L24 | chromosome | CDS | 204046 | 312 | + | 0.36859 |
rplY | EF0820 | ribosomal protein L25 | chromosome | CDS | 783535 | 609 | - | 0.3711 |
rpmA | EF0970 | ribosomal protein L27 | chromosome | CDS | 932013 | 288 | + | 0.409722 |
rpmB | EF3116 | ribosomal protein L28 | chromosome | CDS | 2992157 | 189 | + | 0.375661 |
rpmC | EF0214 | ribosomal protein L29 | chromosome | CDS | 203106 | 189 | + | 0.333333 |
rpmD | EF0225 | ribosomal protein L30 | chromosome | CDS | 207181 | 180 | + | 0.355556 |
rpmE | EF1171 | ribosomal protein L31 | chromosome | CDS | 1142064 | 270 | + | 0.403704 |
rpmF-1 | EF0544 | ribosomal protein L32 | chromosome | CDS | 501328 | 174 | + | 0.321839 |
rpmF-2 | EF0586 | ribosomal protein L32 | chromosome | CDS | 548691 | 180 | + | 0.35 |
rpmF-3 | EF1048 | ribosomal protein L32 | chromosome | CDS | 1013367 | 180 | + | 0.388889 |
rpmG-1 | EF0588 | ribosomal protein L33 | chromosome | CDS | 549300 | 150 | + | 0.346667 |
rpmG-2 | EF2731 | ribosomal protein L33 | chromosome | CDS | 2641005 | 153 | - | 0.366013 |
rpmG-3 | EF2856 | ribosomal protein L33 | chromosome | CDS | 2736911 | 150 | - | 0.306667 |
rpmG-4 | EF3203 | ribosomal protein L33 | chromosome | CDS | 3074150 | 150 | + | 0.406667 |
rpmH | EF3333 | ribosomal protein L34 | chromosome | CDS | 3217433 | 135 | - | 0.4 |
rpmI | EF0915 | ribosomal protein L35 | chromosome | CDS | 881390 | 201 | + | 0.432836 |
rpmJ | EF0230 | ribosomal protein L36 | chromosome | CDS | 210346 | 117 | + | 0.358974 |
rpsB | EF2398 | ribosomal protein S2 | chromosome | CDS | 2322059 | 786 | - | 0.391858 |
rpsC | EF0212 | ribosomal protein S3 | chromosome | CDS | 202023 | 657 | + | 0.417047 |
rpsD | EF3070 | ribosomal protein S4 | chromosome | CDS | 2941388 | 612 | + | 0.403595 |
rpsE | EF0224 | ribosomal protein S5 | chromosome | CDS | 206666 | 501 | + | 0.43513 |
rpsF | EF0007 | ribosomal protein S6 | chromosome | CDS | 9350 | 303 | + | 0.376238 |
rpsG | EF0199 | ribosomal protein S7 | chromosome | CDS | 191732 | 471 | + | 0.409766 |
rpsH | EF0220 | ribosomal protein S8 | chromosome | CDS | 205162 | 399 | + | 0.383459 |
rpsI | EF3230 | ribosomal protein S9 | chromosome | CDS | 3100122 | 393 | - | 0.440204 |
rpsJ | EF0205 | ribosomal protein S10 | chromosome | CDS | 198498 | 309 | + | 0.378641 |
rpsK | EF0232 | ribosomal protein S11 | chromosome | CDS | 210875 | 390 | + | 0.417949 |
rpsL | EF0198 | ribosomal protein S12 | chromosome | CDS | 191263 | 414 | + | 0.403382 |
rpsM | EF0231 | ribosomal protein S13 | chromosome | CDS | 210482 | 366 | + | 0.404372 |
rpsN-1 | EF0219 | ribosomal protein S14 | chromosome | CDS | 204941 | 186 | + | 0.403226 |
rpsN-2 | EF0585 | ribosomal protein S14 | chromosome | CDS | 548407 | 270 | + | 0.425926 |
rpsN-3 | EF3202 | ribosomal protein S14 | chromosome | CDS | 3073770 | 270 | + | 0.42963 |
rpsO | EF3065 | ribosomal protein S15 | chromosome | CDS | 2937590 | 270 | - | 0.377778 |
rpsP | EF1694 | ribosomal protein S16 | chromosome | CDS | 1643346 | 276 | - | 0.355072 |
rpsQ | EF0215 | ribosomal protein S17 | chromosome | CDS | 203318 | 267 | + | 0.355805 |
rpsR | EF0009 | ribosomal protein S18 | chromosome | CDS | 10289 | 240 | + | 0.395833 |
rpsS | EF0210 | ribosomal protein S19 | chromosome | CDS | 201309 | 279 | + | 0.387097 |
rpsT | EF2443 | ribosomal protein S20 | chromosome | CDS | 2361721 | 252 | + | 0.376984 |
rpsU | EF2416 | ribosomal protein S21 | chromosome | CDS | 2336159 | 177 | - | 0.367232 |
serS-1 | EF0100 | seryl-tRNA synthetase | chromosome | CDS | 103833 | 1272 | + | 0.402516 |
serS-2 | EF3292 | seryl-tRNA synthetase | chromosome | CDS | 3172906 | 1272 | + | 0.399371 |
sun | EF3122 | Sun protein | chromosome | CDS | 2997812 | 1380 | - | 0.41087 |
tgt | EF0896 | queuine tRNA-ribosyltransferase | chromosome | CDS | 861622 | 1146 | + | 0.379581 |
thrS | EF2858 | threonyl-tRNA synthetase | chromosome | CDS | 2739486 | 1938 | - | 0.387513 |
tlyA | EF0982 | hemolysin A | chromosome | CDS | 940049 | 816 | + | 0.404412 |
trmD | EF1899 | tRNA (guanine-N1)-methyltransferase | chromosome | CDS | 1843544 | 741 | - | 0.394062 |
trmU | EF2070 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | chromosome | CDS | 1990775 | 1125 | - | 0.398222 |
trpS | EF2679 | tryptophanyl-tRNA synthetase | chromosome | CDS | 2590296 | 1011 | + | 0.390702 |
tryS-1 | EF0633 | tyrosyl-tRNA synthetase | chromosome | CDS | 587436 | 1257 | + | 0.375497 |
tryS-2 | EF1739 | tyrosyl-tRNA synthetase | chromosome | CDS | 1685850 | 1263 | - | 0.369755 |
tsf | EF2397 | translation elongation factor Ts | chromosome | CDS | 2321072 | 882 | - | 0.393424 |
tuf | EF0201 | translation elongation factor Tu | chromosome | CDS | 194518 | 1188 | + | 0.411616 |
valS | EF2931 | valyl-tRNA synthetase | chromosome | CDS | 2809629 | 2643 | - | 0.404086 |
yfiA | EF1764 | ribosomal subunit interface protein | chromosome | CDS | 1711907 | 552 | - | 0.358696 |