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2024-05-25 11:12:01

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Genomic element: chromosome 1

Number of genes found: 165

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RSP_1833 putative ribosomal-protein-alanine acetyltransferasechromosome 1 CDS425150 585 + 0.712821
NA RSP_2386 translation initiation factor eIF-2B, alpha subunitchromosome 1 CDS1015654 1095 - 0.706849
NA RSP_0827 Ribosomal protein L25chromosome 1 CDS2571882 612 - 0.635621
NA RSP_0894 hypothetical proteinchromosome 1 CDS2645693 459 + 0.703704
NA RSP_0385 Threonyl-tRNA synthetase, class IIachromosome 1 CDS2117070 1941 + 0.651726
NA RSP_0248 elongation factor EF-Pchromosome 1 CDS1972274 564 - 0.625886
NA RSP_0479 Elongation factor P (EF-P)chromosome 1 CDS2214640 567 + 0.634921
NA RSP_0215 conserved hypothetical proteinchromosome 1 CDS1927567 1338 - 0.672646
NA RSP_2267 hypothetical proteinchromosome 1 CDS885533 453 + 0.750552
NA RSP_0715 Ribonuclease T2chromosome 1 CDS2461281 621 + 0.713366
NA RSP_0873 N-formylmethionyl tRNA deformylasechromosome 1 CDS2621209 492 + 0.73374
NA RSP_1050 Acetyltransferase (GNAT) familychromosome 1 CDS2808511 561 - 0.745098
NA RSP_0584 Lysyl-tRNA synthetasechromosome 1 CDS2326302 1581 + 0.659709
NA RSP_0140 30S ribosomal protein S18chromosome 1 CDS1854625 228 + 0.640351
NA RSP_2414 conserved hypothetical proteinchromosome 1 CDS1045230 1152 - 0.71875
NA RSP_2971 S-adenosylmethionine tRNA ribosyltransferase-isomerasechromosome 1 CDS1656038 1041 - 0.716619
NA RSP_2737 Putative ssRNA endoribonuclease L-PSPchromosome 1 CDS1387180 348 - 0.695402
NA RSP_1205 Poly A polymerase family proteinchromosome 1 CDS2976495 1143 - 0.755906
NA RSP_0743 Putative translation factorchromosome 1 CDS2487540 939 + 0.759318
NA RSP_0814 Acetyltransferasechromosome 1 CDS2555865 714 - 0.707283
NA RSP_0935 MiaB-like Radical SAM proteinchromosome 1 CDS2685220 1278 - 0.698748
NA RSP_2391 2'-5' RNA ligasechromosome 1 CDS1019816 555 + 0.744144
NA RSP_1052 possible Acetyltransferasechromosome 1 CDS2809595 537 - 0.700186
NA RSP_2423 putative Heat shock protein 15 (HSP15)chromosome 1 CDS1055245 297 + 0.710438
NA RSP_1085 hypothetical proteinchromosome 1 CDS2843493 246 + 0.666667
NA RSP_0141 50S ribosomal protein L9chromosome 1 CDS1854865 570 + 0.661404
NA RSP_0568 Isoleucyl-tRNA synthetase, class Iachromosome 1 CDS2304633 2955 - 0.660237
NA RSP_6032 Potential TolAchromosome 1 CDS659732 435 - 0.714943
NA RSP_1000 conserved hypothetical proteinchromosome 1 CDS2758394 798 + 0.73183
NA RSP_0571 tRNA pseudouridine synthasechromosome 1 CDS2310595 768 + 0.72526
NA RSP_1051 hypothetical proteinchromosome 1 CDS2809068 531 - 0.72693
NA RSP_1745 Pseudouridine synthasechromosome 1 CDS326326 1041 + 0.678194
NA RSP_0558 Possible ribosomal protein L11 methyltransferasechromosome 1 CDS2295006 876 - 0.700913
NA RSP_0732 hypothetical proteinchromosome 1 CDS2476773 915 - 0.753005
NA RSP_2906 Putative methylasechromosome 1 CDS1584810 837 - 0.76583
NA RSP_1887 Ribosomal protein L33chromosome 1 CDS484975 168 + 0.571429
NA RSP_1926 tRNA-Dihydrouridine synthasechromosome 1 CDS523580 942 + 0.708068
NA RSP_6147 rRNA methyltransferase RsmB-likechromosome 1 CDS2861171 1266 - 0.754344
NA RSP_6052 conserved hypothetical proteinchromosome 1 CDS1060857 2877 - 0.738269
NA RSP_1485 ATP-dependent RNA helicasechromosome 1 CDS70529 1809 - 0.726921
NA RSP_0478 putative lysyl-tRNA synthetasechromosome 1 CDS2213501 1038 - 0.716763
NA RSP_2239 tRNA/rRNA metyltransferasechromosome 1 CDS857218 786 + 0.707379
NA RSP_1524 Nucleotidyltransferase family proteinchromosome 1 CDS110754 666 + 0.713213
NA RSP_0624 conserved hypothetical proteinchromosome 1 CDS2362292 1044 - 0.734674
NA RSP_0832 Putative GTP-binding proteinchromosome 1 CDS2577892 1098 + 0.690346
NA RSP_0455 possible NOL1/NOP2/sun family proteinchromosome 1 CDS2188723 1164 - 0.748282
NA RSP_2616 conserved hypothetical proteinchromosome 1 CDS1256030 498 + 0.672691
NA RSP_1538 probable glucose-1-phosphate cytidylyltransferasechromosome 1 CDS127361 774 + 0.634367
NA RSP_0685 Possible ribosomal RNA small subunit methyltransferase C RsmCchromosome 1 CDS2428426 1002 - 0.723553
NA RSP_2401 putative 6-aminohexanoate-cyclic-dimer hydrolasechromosome 1 CDS1028860 1458 - 0.740741
NA RSP_0022 Probable ribosomal protein L13chromosome 1 CDS1722870 465 - 0.630108
NA RSP_0874 Formylmethionine deformylasechromosome 1 CDS2621697 504 + 0.662698
NA RSP_1493 Amidasechromosome 1 CDS77589 1311 + 0.746758
NA RSP_1473 conserved hypothetical proteinchromosome 1 CDS58041 372 - 0.717742
NA RSP_1506 Pseudouridine synthase, Rluchromosome 1 CDS89409 648 + 0.688272
NA RSP_2340 MiaB-like Radical SAM proteinchromosome 1 CDS965892 1311 - 0.683448
NA RSP_0139 Ribosomal protein S6chromosome 1 CDS1854206 399 + 0.634085
NA RSP_1366 Class I peptide chain release factorchromosome 1 CDS3144367 426 + 0.720657
InfB RSP_1165 Translation Initiation factor 2chromosome 1 CDS2927454 2511 + 0.682597
InfC RSP_1937 Translation initiation factor IF-3chromosome 1 CDS536668 585 - 0.620513
PSrp1 RSP_1157 Ribosomal subunit interface protein Ychromosome 1 CDS2919878 576 + 0.607639
Pnp RSP_1112 polyribonucleotide nucleotidyltransferasechromosome 1 CDS2868926 2151 + 0.650395
ProS RSP_0778 Prolyl-tRNA synthetase, class IIachromosome 1 CDS2520775 1338 - 0.661435
TSF RSP_2861 Translation elongation factor Tschromosome 1 CDS1439332 897 - 0.663322
TrmA RSP_1202 putative RNA SAM-dependent methyltransferase, TrmA familychromosome 1 CDS2971536 1215 - 0.749794
TruB RSP_1108 tRNA pseudouridine synthase Bchromosome 1 CDS2865122 906 + 0.707506
alaS RSP_0451 Alanyl-tRNA synthetase, class IIcchromosome 1 CDS2181723 2652 - 0.68816
argS RSP_2943 Arginyl-tRNA synthetase, class Ichromosome 1 CDS1622549 1752 - 0.667808
aspS RSP_0815 Aspartyl-tRNA synthetasechromosome 1 CDS2556582 1776 - 0.671171
cysS RSP_2722 Cysteinyl-tRNA synthetase, class Iachromosome 1 CDS1371654 1500 + 0.67
def1 RSP_0872 Formylmethionine deformylasechromosome 1 CDS2620676 534 + 0.672285
dtd RSP_2256 D-tyrosyl-tRNA(Tyr) deacylasechromosome 1 CDS874411 438 - 0.719178
fmt RSP_0875 methionyl-tRNA formyl transferasechromosome 1 CDS2622204 909 + 0.730473
frr RSP_2706 Ribosome recycling factorchromosome 1 CDS1355162 567 + 0.643739
ftsJ RSP_2772 23S rRNA methylasechromosome 1 CDS1419622 735 + 0.680272
fusA RSP_2247 putative translation elongation factorchromosome 1 CDS862970 2010 + 0.69602
fusA1 RSP_1708 Elongation factor Gchromosome 1 CDS304302 2118 + 0.641171
gatA RSP_2270 Glutamyl-tRNA (Gln) amidotransferase, subunit Achromosome 1 CDS887735 1476 + 0.690379
gatB RSP_1986 Glutamyl-tRNA amidotransferase subunit Bchromosome 1 CDS581296 1512 - 0.650794
gatC RSP_6043 Glu-tRNA (Gln) amidotransferase, subunit Cchromosome 1 CDS887451 288 + 0.673611
gid RSP_2629 Glucose-inhibited division protein Achromosome 1 CDS1266934 1335 - 0.674906
gltX RSP_1995 Glutamyl-tRNA synthetasechromosome 1 CDS592355 1416 - 0.66596
gltX-1 RSP_0797 Glutamyl-tRNA synthetase, class Icchromosome 1 CDS2541066 1326 - 0.680241
gltX/glnS RSP_2628 glutamyl-/ glutaminyl-tRNA synthetasechromosome 1 CDS1266116 834 - 0.732614
glyQ RSP_1856 Heterodimeric glycyl-transfer RNA synthetasechromosome 1 CDS452398 924 + 0.649351
glyS RSP_1858 Glycyl-tRNA synthetase, beta subunitchromosome 1 CDS453792 2094 + 0.694842
gshB RSP_1815 glutathione synthetasechromosome 1 CDS403146 951 + 0.659306
infA RSP_0626 Probable translation initiation factor 1 (IF-1)chromosome 1 CDS2363911 219 - 0.561644
ksgA RSP_2905 Putative ribosomal RNA adenine dimethylasechromosome 1 CDS1582444 837 + 0.69773
leuS RSP_0840 LeuS, leucyl-tRNA synthetasechromosome 1 CDS2588362 2544 - 0.674135
map1 RSP_0923 Methionine aminopeptidase, subfamily 1chromosome 1 CDS2672577 882 - 0.663265
metG RSP_0425 Methionyl-tRNA synthetasechromosome 1 CDS2156707 1719 + 0.666085
mgpS RSP_2422 putative ATP-dependent helicase, MgpSchromosome 1 CDS1052447 2793 + 0.699606
miaA RSP_2704 Probable tRNA delta(2)-isopentenylpyrophosphate transferasechromosome 1 CDS1353302 945 - 0.71746
nifR3 RSP_2836 tRNA-dihydrouridine synthase, nifR3chromosome 1 CDS1474599 981 - 0.740061
pheS RSP_1763 Phenylalanyl-tRNA synthetase alpha subunitchromosome 1 CDS346893 1083 - 0.685134
prfA RSP_2907 peptide chain release factor 1chromosome 1 CDS1585643 1056 - 0.702652
prfB RSP_2977 Peptide chain release factor 2chromosome 1 CDS1664604 1128 - 0.666667
prfC RSP_2537 Probable peptide chain release factor RF3chromosome 1 CDS1180302 1605 - 0.664174
pth RSP_0824 Peptidyl-tRNA hydrolasechromosome 1 CDS2570458 678 - 0.70059
rbfA RSP_1106 Ribosome-binding factor Achromosome 1 CDS2863905 423 + 0.678487
rhlE RSP_2536 ATP-dependent helicase, DEAD-boxchromosome 1 CDS1178520 1557 - 0.691073
rhlE2 RSP_0819 DEAD/DEAH box helicasechromosome 1 CDS2564430 1386 + 0.708514
rimM RSP_1047 putative 16S rRNA processing proteinchromosome 1 CDS2807173 510 - 0.719608
rluB RSP_2266 Pseudouridine synthase, (predicted)chromosome 1 CDS883673 1527 - 0.757695
rluD RSP_2409 putative Pseudouridine synthase, Rluchromosome 1 CDS1038091 1050 + 0.713333
rnd RSP_1971 Ribonuclease Dchromosome 1 CDS562467 1158 + 0.669257
rnd RSP_1152 Ribonuclease Dchromosome 1 CDS2916201 615 + 0.650406
rne RSP_2131 Ribonuclease Echromosome 1 CDS732464 2811 + 0.696549
rph RSP_1221 ribonuclease PHchromosome 1 CDS2994260 726 + 0.674931
rplA RSP_1702 Ribosomal protein L1chromosome 1 CDS291486 699 + 0.67382
rplB RSP_1719 Ribosomal protein L2chromosome 1 CDS309812 840 + 0.678571
rplC RSP_1716 Ribosomal protein L3chromosome 1 CDS308064 723 + 0.661134
rplD RSP_1717 50S ribosomal protein L4chromosome 1 CDS308776 621 + 0.648953
rplE RSP_1727 Ribosomal protein L5chromosome 1 CDS313910 561 + 0.618538
rplF RSP_1730 Ribosomal protein L6chromosome 1 CDS315217 534 + 0.636704
rplJ RSP_1701 Ribosomal protein L10chromosome 1 CDS292423 516 + 0.629845
rplK RSP_1703 Ribosomal protein L11chromosome 1 CDS291030 453 + 0.637969
rplL RSP_1700 50S Ribosomal protein L7/L12chromosome 1 CDS293008 378 + 0.611111
rplN RSP_1725 Ribosomal protein L14chromosome 1 CDS313237 369 + 0.626016
rplO RSP_1734 50S ribosomal protein L15chromosome 1 CDS317054 486 + 0.676955
rplP RSP_1723 Ribosomal protein L16chromosome 1 CDS312048 414 + 0.669082
rplQ RSP_1740 Ribosomal protein L17chromosome 1 CDS321841 420 + 0.671429
rplR RSP_1731 Ribosomal protein L18chromosome 1 CDS315762 360 + 0.658333
rplS RSP_1044 50s ribosomal protein L19chromosome 1 CDS2804836 375 - 0.642667
rplT RSP_1764 Ribosomal protein L20chromosome 1 CDS348180 363 - 0.669421
rplV RSP_1721 Ribosomal protein L22chromosome 1 CDS310937 381 + 0.611549
rplW RSP_1718 50S ribosomal protein L23chromosome 1 CDS309393 297 + 0.599327
rplX RSP_1726 Ribosomal protein L24chromosome 1 CDS313605 306 + 0.660131
rpmB RSP_2016 50S ribosomal protein L28chromosome 1 CDS618406 291 + 0.652921
rpmC RSP_1724 Ribosomal protein L29chromosome 1 CDS312701 207 + 0.676328
rpmD RSP_1733 Ribosomal protein L30chromosome 1 CDS316709 189 + 0.645503
rpmE RSP_1043 ribosomal protein L31chromosome 1 CDS2804602 222 - 0.630631
rpmF RSP_2614 possible 50S ribosomal protein L32chromosome 1 CDS1254831 207 - 0.671498
rpmH RSP_1059 50S ribosomal protein L34chromosome 1 CDS2817892 135 + 0.703704
rpmI RSP_1765 Ribosomal protein L35chromosome 1 CDS348555 201 - 0.61194
rpmJ RSP_1398 ribosomal protein L36chromosome 1 CDS3176563 126 - 0.634921
rpsB RSP_2860 Ribosomal protein S2chromosome 1 CDS1440310 762 - 0.66273
rpsC RSP_1722 Ribosomal protein S3chromosome 1 CDS311317 717 + 0.659693
rpsD RSP_2283 Ribosomal protein S4chromosome 1 CDS904801 621 + 0.637681
rpsE RSP_1732 Ribosomal protein S5chromosome 1 CDS316133 564 + 0.671986
rpsG RSP_1709 Ribosomal protein S7chromosome 1 CDS303807 471 + 0.636943
rpsH RSP_1729 Ribosomal protein S8chromosome 1 CDS314808 399 + 0.649123
rpsI RSP_0021 Probable ribosomal protein S9chromosome 1 CDS1722384 483 - 0.668737
rpsJ RSP_1715 Ribosomal protein S10chromosome 1 CDS307742 309 + 0.618123
rpsK RSP_1738 Ribosomal protein S11chromosome 1 CDS320219 390 + 0.658974
rpsL RSP_1710 Ribosomal protein S12chromosome 1 CDS303423 372 + 0.612903
rpsM RSP_1737 Ribosomal protein S13chromosome 1 CDS319837 369 + 0.644986
rpsN RSP_1728 Ribosomal protein S14chromosome 1 CDS314490 306 + 0.614379
rpsO RSP_1111 Ribosomal protein S15chromosome 1 CDS2868476 270 + 0.633333
rpsP RSP_1048 30S ribosomal protein S16chromosome 1 CDS2807783 351 - 0.675214
rpsQ RSP_6017 Ribosomal protein S17chromosome 1 CDS312921 243 + 0.617284
rpsS RSP_1720 Ribosomal protein S19chromosome 1 CDS310655 279 + 0.580645
rpsT RSP_1341 Ribosomal protein S20chromosome 1 CDS3109958 279 + 0.706093
rpsU RSP_0718 30S ribosomal protein S21 (RpsU)chromosome 1 CDS2464235 207 + 0.637681
serS RSP_1795 Probable Seryl-tRNA synthetasechromosome 1 CDS380801 1293 - 0.689869
tdcF RSP_1223 Putative translation initiation inhibitor, yjgF family / putative Endoribonuclease L-PSPchromosome 1 CDS2995590 375 + 0.658667
tgt RSP_2804 Probable queuine tRNA ribosyltransferasechromosome 1 CDS1512737 1131 - 0.692308
trmD RSP_1045 tRNA (guanine-N1-)-methyltransferasechromosome 1 CDS2805259 837 - 0.694146
trmU RSP_2619 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome 1 CDS1257890 1140 - 0.699123
trpS RSP_1808 tryptophanyl-tRNA synthetasechromosome 1 CDS394430 1074 - 0.658287
tufA RSP_1707 Elongation factor Tu (EF-Tu)chromosome 1 CDS287817 1176 + 0.651361
tufA RSP_1714 Elongation factor TUchromosome 1 CDS306494 1176 + 0.647959
tyrS RSP_4041 Tyrosyl-tRNA synthetase, class Ibchromosome 1 CDS1129891 1251 - 0.66187
valS RSP_1989 Putative valyl-tRNA synthetasechromosome 1 CDS583987 2964 - 0.674089